mirror of
https://github.com/Unidata/netcdf-c.git
synced 2024-11-27 07:30:33 +08:00
Clean up, bring over a new action script. This one uses apt and cached builds instead of conda.
This commit is contained in:
Ward Fisher
parent
1814da1f7f
commit
7fce4b3482
22
.github/workflows/conda-env/1.10.7.txt
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22
.github/workflows/conda-env/1.10.7.txt
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@ -1,22 +0,0 @@
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# This file may be used to create an environment using:
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# $ conda create --name <env> --file <this file>
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# platform: linux-64
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_libgcc_mutex=0.1=main
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binutils_impl_linux-64=2.31.1=h6176602_1
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binutils_linux-64=2.31.1=h6176602_9
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ca-certificates=2020.10.14=0
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curl=7.71.1=hbc83047_1
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gcc_impl_linux-64=7.3.0=habb00fd_1
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gcc_linux-64=7.3.0=h553295d_9
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hdf5=1.10.7=hb1b8bf9_0
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krb5=1.18.2=h173b8e3_0
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libcurl=7.71.1=h20c2e04_1
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libedit=3.1.20191231=h14c3975_1
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libgcc=7.2.0=h69d50b8_2
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libgcc-ng=9.1.0=hdf63c60_0
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libgfortran-ng=7.3.0=hdf63c60_0
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libssh2=1.9.0=h1ba5d50_1
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libstdcxx-ng=9.1.0=hdf63c60_0
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ncurses=6.2=he6710b0_1
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openssl=1.1.1h=h7b6447c_0
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zlib=1.2.11=h7b6447c_3
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29
.github/workflows/conda-env/1.8.20.txt
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29
.github/workflows/conda-env/1.8.20.txt
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@ -1,29 +0,0 @@
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# This file may be used to create an environment using:
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# $ conda create --name <env> --file <this file>
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# platform: linux-64
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_libgcc_mutex=0.1=main
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binutils_impl_linux-64=2.31.1=h6176602_1
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binutils_linux-64=2.31.1=h6176602_9
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bzip2=1.0.8=h7b6447c_0
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ca-certificates=2020.10.14=0
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cmake=3.18.2=ha30ef3c_0
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expat=2.2.10=he6710b0_2
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gcc_impl_linux-64=7.3.0=habb00fd_1
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gcc_linux-64=7.3.0=h553295d_9
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hdf5=1.8.20=hba1933b_1
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krb5=1.18.2=h173b8e3_0
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libcurl=7.71.1=h20c2e04_1
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libedit=3.1.20191231=h14c3975_1
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libgcc=7.2.0=h69d50b8_2
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libgcc-ng=9.1.0=hdf63c60_0
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libgfortran-ng=7.3.0=hdf63c60_0
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libssh2=1.9.0=h1ba5d50_1
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libstdcxx-ng=9.1.0=hdf63c60_0
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libuv=1.40.0=h7b6447c_0
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lz4-c=1.9.2=heb0550a_3
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ncurses=6.2=he6710b0_1
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openssl=1.1.1h=h7b6447c_0
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rhash=1.4.0=h1ba5d50_0
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xz=5.2.5=h7b6447c_0
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zlib=1.2.11=h7b6447c_3
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zstd=1.4.5=h9ceee32_0
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126
.github/workflows/github-actions-ci.yml
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126
.github/workflows/github-actions-ci.yml
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@ -1,126 +0,0 @@
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name: test-github-actions
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on: [push]
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jobs:
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autotools:
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runs-on: ubuntu-latest
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strategy:
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matrix:
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hdf5: [ 1.10.7 ]
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use_nc4: [ nc3, nc4 ]
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use_dap: [ dap_off, dap_on ]
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steps:
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- name: Set up Included Actions
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uses: actions/checkout@v2
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- name: Install Conda ${{ matrix.hdf5 }}
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uses: conda-incubator/setup-miniconda@v2
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with:
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activate-environment: ${{ matrix.hdf5 }}
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environment-file: .github/workflows/conda-env/${{ matrix.hdf5 }}.txt
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###
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# Set environmental variables (for configuring)
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###
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- run: echo "ENABLE_NC4=--disable-netcdf-4" >> $GITHUB_ENV
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if: matrix.use_nc4 == 'nc3'
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- run: echo "ENABLE_NC4=--enable-netcdf-4" >> $GITHUB_ENV
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if: matrix.use_nc4 == 'nc4'
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- run: echo "ENABLE_DAP=--disable-dap" >> $GITHUB_ENV
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if: matrix.use_dap == 'dap_off'
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- run: echo "ENABLE_DAP=--enable-dap" >> $GITHUB_ENV
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if: matrix.use_dap == 'dap_on'
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#- run: echo "LDFLAGS=-lrt" >> $GITHUB_ENV
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###
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# Configure and Build and Run Tests
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###
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- name: Autoreconf
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shell: bash -l {0}
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run: autoreconf -if
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- name: Configure
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shell: bash -l {0}
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run: ./configure ${ENABLE_NC4_AC} ${ENABLE_DAP}
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- name: Build
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shell: bash -l {0}
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run: make -j && make check TESTS="" -j
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- name: Test
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shell: bash -l {0}
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run: make check -j
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#####
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# End Autotools Testing
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#####
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#####
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# CMake Testing
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#####
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cmake:
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runs-on: ubuntu-latest
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strategy:
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matrix:
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hdf5: [ 1.8.20, 1.10.7 ]
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use_nc4: [ nc3, nc4 ]
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use_dap: [ dap_off, dap_on ]
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steps:
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- name: Set up Included Actions
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uses: actions/checkout@v2
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- name: Install Conda ${{ matrix.hdf5 }}
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uses: conda-incubator/setup-miniconda@v2
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with:
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activate-environment: ${{ matrix.hdf5 }}
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environment-file: .github/workflows/conda-env/${{ matrix.hdf5 }}.txt
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#- name: Query User
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# run: whoami
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#- name: Query System
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# run: uname -a
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#- name: Directory Info
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# run: pwd && ls
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#- name: Query Conda
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# shell: bash -l {0}
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# run: conda list
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#- name: Query HDF5
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# shell: bash -l {0}
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# run: which h5dump
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#- name: Run autoreconf
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# shell: bash -l {0}
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# run: autoreconf -if
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###
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# Set environmental variables (for configuring)
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###
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- run: echo "CTEST_OUTPUT_ON_FAILURE=1" >> $GITHUB_ENV
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- run: echo "ENABLE_NC_NC4=OFF" >> $GITHUB_ENV
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if: matrix.use_nc4 == 'nc3'
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- run: echo "ENABLE_NC_NC4=ON" >> $GITHUB_ENV
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if: matrix.use_nc4 == 'nc4'
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- run: echo "ENABLE_NC_DAP=OFF" >> $GITHUB_ENV
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if: matrix.use_dap == 'dap_off'
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- run: echo "ENABLE_NC_DAP=ON" >> $GITHUB_ENV
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if: matrix.use_dap == 'dap_on'
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###
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# Configure and Build and Run Tests
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###
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- name: Create build directory.
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shell: bash -l {0}
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run: mkdir build && cd build && pwd
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#- name: Sanity Check
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# shell: bash -l {0}
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# run: pwd && ls && ls ..
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- name: cmake
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shell: bash -l {0}
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run: cd build && cmake .. -DENABLE_NETCDF_4=${ENABLE_NC_NC4} -DENABLE_DAP=${ENABLE_NC_DAP}
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- name: build
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shell: bash -l {0}
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run: cd build && make -j
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- name: Test
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shell: bash -l {0}
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run: cd build && make test -j
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233
.github/workflows/run_tests.yml
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.github/workflows/run_tests.yml
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###
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# Build hdf4, hdf5 dependencies and cache them in a combined directory.
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###
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name: Run netCDF Tests
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on: [push]
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jobs:
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build-deps:
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runs-on: ubuntu-latest
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strategy:
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matrix:
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hdf5: [ 1.8.21, 1.10.7 ]
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steps:
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- uses: actions/checkout@v2
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- name: Install System dependencies
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shell: bash -l {0}
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run: sudo apt install -y libaec-dev zlib1g-dev automake autoconf libcurl4-openssl-dev libjpeg-dev wget curl bzip2 m4 flex bison cmake
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###
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# Installing libhdf4 and libhdf5
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###
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- name: Cache libhdf5-${{ matrix.hdf5 }}
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id: cache-hdf5
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uses: actions/cache@v2
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with:
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path: ~/environments/${{ matrix.hdf5 }}
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key: hdf5-${{ runner.os }}-${{ matrix.hdf5 }}
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- name: Build libhdf5-${{ matrix.hdf5 }}
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if: steps.cache-hdf5.outputs.cache-hit != 'true'
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run: |
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set -x
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wget https://support.hdfgroup.org/ftp/HDF/releases/HDF4.2.15/src/hdf-4.2.15.tar.bz2
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tar -jxf hdf-4.2.15.tar.bz2
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pushd hdf-4.2.15
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./configure --prefix=${HOME}/environments/${{ matrix.hdf5 }} --disable-static --enable-shared --disable-fortran --disable-netcdf --with-szlib
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make -j
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make install -j
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popd
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wget https://support.hdfgroup.org/ftp/HDF5/releases/hdf5-$(echo ${{ matrix.hdf5 }} | cut -d. -f 1,2)/hdf5-${{ matrix.hdf5 }}/src/hdf5-${{ matrix.hdf5 }}.tar.bz2
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tar -jxf hdf5-${{ matrix.hdf5 }}.tar.bz2
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pushd hdf5-${{ matrix.hdf5 }}
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./configure --disable-static --enable-shared --prefix=${HOME}/environments/${{ matrix.hdf5 }} --enable-hl --with-szlib
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make -j
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make install -j
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popd
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nc-autotools:
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needs: build-deps
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runs-on: ubuntu-latest
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strategy:
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matrix:
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hdf5: [ 1.8.21, 1.10.7 ]
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use_nc4: [ nc3, nc4 ]
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use_dap: [ dap_off, dap_on ]
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steps:
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- uses: actions/checkout@v2
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- name: Install System dependencies
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shell: bash -l {0}
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run: sudo apt install -y libaec-dev zlib1g-dev automake autoconf libcurl4-openssl-dev libjpeg-dev wget curl bzip2 m4 flex bison cmake
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###
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# Set Environmental Variables
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###
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- run: echo "CFLAGS=-I${HOME}/environments/${{ matrix.hdf5 }}/include" >> $GITHUB_ENV
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- run: echo "LDFLAGS=-L${HOME}/environments/${{ matrix.hdf5 }}/lib" >> $GITHUB_ENV
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- run: echo "LD_LIBRARY_PATH=${HOME}/environments/${{ matrix.hdf5 }}/lib" >> $GITHUB_ENV
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- run: |
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echo "ENABLE_HDF4=--disable-hdf4" >> $GITHUB_ENV
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echo "ENABLE_NC4=--disable-netcdf-4" >> $GITHUB_ENV
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if: matrix.use_nc4 == 'nc3'
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- run: |
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echo "ENABLE_HDF4=--enable-hdf4" >> $GITHUB_ENV
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echo "ENABLE_NC4=--enable-netcdf-4" >> $GITHUB_ENV
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if: matrix.use_nc4 == 'nc4'
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- run: echo "ENABLE_DAP=--disable-dap" >> $GITHUB_ENV
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if: matrix.use_dap == 'dap_off'
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- run: echo "ENABLE_DAP=--enable-dap" >> $GITHUB_ENV
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if: matrix.use_dap == 'dap_on'
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###
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# Fetch Cache
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###
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- name: Fetch HDF Cache
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id: cache-hdf
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uses: actions/cache@v2
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with:
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path: ~/environments/${{ matrix.hdf5 }}
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key: hdf5-${{ runner.os }}-${{ matrix.hdf5 }}
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- name: Check Cache
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shell: bash -l {0}
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run: ls ${HOME}/environments && ls ${HOME}/environments/${{ matrix.hdf5 }} && ls ${HOME}/environments/${{ matrix.hdf5}}/lib
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###
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# Configure and build
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###
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- name: Run autoconf
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shell: bash -l {0}
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run: autoreconf -if
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- name: Configure
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shell: bash -l {0}
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run: CFLAGS=${CFLAGS} LDFLAGS=${LDFLAGS} LD_LIBRARY_PATH=${LD_LIBRARY_PATH} ./configure ${ENABLE_HDF4} ${ENABLE_NC4} ${ENABLE_DAP}
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- name: Look at config.log if error
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shell: bash -l {0}
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run: cat config.log
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if: ${{ failure() }}
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- name: Print Summary
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shell: bash -l {0}
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run: cat libnetcdf.settings
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- name: Build Library and Utilities
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shell: bash -l {0}
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run: CFLAGS=${CFLAGS} LDFLAGS=${LDFLAGS} LD_LIBRARY_PATH=${LD_LIBRARY_PATH} make -j
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if: ${{ success() }}
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- name: Build Tests
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shell: bash -l {0}
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run: CFLAGS=${CFLAGS} LDFLAGS=${LDFLAGS} LD_LIBRARY_PATH=${LD_LIBRARY_PATH} make check TESTS="" -j
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if: ${{ success() }}
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- name: Run Tests
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shell: bash -l {0}
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run: CFLAGS=${CFLAGS} LDFLAGS=${LDFLAGS} LD_LIBRARY_PATH=${LD_LIBRARY_PATH} make check -j
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if: ${{ success() }}
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#- name: Make Distcheck
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# shell: bash -l {0}
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# run: CFLAGS=${CFLAGS} LDFLAGS=${LDFLAGS} LD_LIBRARY_PATH=${LD_LIBRARY_PATH} make distcheck -j
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nc-cmake:
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needs: build-deps
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runs-on: ubuntu-latest
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strategy:
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matrix:
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hdf5: [ 1.8.21, 1.10.7 ]
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use_nc4: [ nc3, nc4 ]
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use_dap: [ dap_off, dap_on ]
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steps:
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|
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- uses: actions/checkout@v2
|
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|
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- name: Install System dependencies
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shell: bash -l {0}
|
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run: sudo apt install -y libaec-dev zlib1g-dev automake autoconf libcurl4-openssl-dev libjpeg-dev wget curl bzip2 m4 flex bison cmake
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|
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###
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# Set Environmental Variables
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###
|
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|
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- run: echo "CMAKE_PREFIX_PATH=${HOME}/environments/${{ matrix.hdf5 }}/" >> $GITHUB_ENV
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- run: echo "LD_LIBRARY_PATH=${HOME}/environments/${{ matrix.hdf5 }}/lib" >> $GITHUB_ENV
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- run: |
|
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echo "ENABLE_HDF4=OFF" >> $GITHUB_ENV
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echo "ENABLE_NC4=OFF" >> $GITHUB_ENV
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if: matrix.use_nc4 == 'nc3'
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- run: |
|
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echo "ENABLE_HDF4=ON" >> $GITHUB_ENV
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echo "ENABLE_NC4=ON" >> $GITHUB_ENV
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if: matrix.use_nc4 == 'nc4'
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- run: echo "ENABLE_DAP=OFF" >> $GITHUB_ENV
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if: matrix.use_dap == 'dap_off'
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- run: echo "ENABLE_DAP=ON" >> $GITHUB_ENV
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if: matrix.use_dap == 'dap_on'
|
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- run: echo "CTEST_OUTPUT_ON_FAILURE=1" >> $GITHUB_ENV
|
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|
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###
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# Fetch Cache
|
||||
###
|
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|
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- name: Fetch HDF Cache
|
||||
id: cache-hdf5
|
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uses: actions/cache@v2
|
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with:
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path: ~/environments/${{ matrix.hdf5 }}
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key: hdf5-${{ runner.os }}-${{ matrix.hdf5 }}
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|
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- name: Check Cache
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shell: bash -l {0}
|
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run: ls ${HOME}/environments && ls ${HOME}/environments/${{ matrix.hdf5 }} && ls ${HOME}/environments/${{ matrix.hdf5}}/lib
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|
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###
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# Configure and build
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###
|
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|
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- name: Perform out-of-directory build
|
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shell: bash -l {0}
|
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run: |
|
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mkdir build
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cd build
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LD_LIBRARY_PATH=${LD_LIBRARY_PATH} cmake .. -DENABLE_HDF4=${ENABLE_HDF4} -DCMAKE_PREFIX_PATH=${CMAKE_PREFIX_PATH} -DENABLE_DAP=${ENABLE_DAP} -DENABLE_NETCDF_4=${ENABLE_NC4}
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|
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- name: Print Summary
|
||||
shell: bash -l {0}
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run: |
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cd build
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cat libnetcdf.settings
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|
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- name: Build All
|
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shell: bash -l {0}
|
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run: |
|
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cd build
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LD_LIBRARY_PATH=${LD_LIBRARY_PATH} make -j 12
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if: ${{ success() }}
|
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|
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- name: Run Tests
|
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shell: bash -l {0}
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run: |
|
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cd build
|
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LD_LIBRARY_PATH=${LD_LIBRARY_PATH} ctest -j 12 .
|
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if: ${{ success() }}
|
||||
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