netcdf-c/libdap4/ncd4types.h

361 lines
12 KiB
C
Raw Normal View History

Primary change: add dap4 support Specific changes: 1. Add dap4 code: libdap4 and dap4_test. Note that until the d4ts server problem is solved, dap4 is turned off. 2. Modify various files to support dap4 flags: configure.ac, Makefile.am, CMakeLists.txt, etc. 3. Add nc_test/test_common.sh. This centralizes the handling of the locations of various things in the build tree: e.g. where is ncgen.exe located. See nc_test/test_common.sh for details. 4. Modify .sh files to use test_common.sh 5. Obsolete separate oc2 by moving it to be part of netcdf-c. This means replacing code with netcdf-c equivalents. 5. Add --with-testserver to configure.ac to allow override of the servers to be used for --enable-dap-remote-tests. 6. There were multiple versions of nctypealignment code. Try to centralize in libdispatch/doffset.c and include/ncoffsets.h 7. Add a unit test for the ncuri code because of its complexity. 8. Move the findserver code out of libdispatch and into a separate, self contained program in ncdap_test and dap4_test. 9. Move the dispatch header files (nc{3,4}dispatch.h) to .../include because they are now shared by modules. 10. Revamp the handling of TOPSRCDIR and TOPBUILDDIR for shell scripts. 11. Make use of MREMAP if available 12. Misc. minor changes e.g. - #include <config.h> -> #include "config.h" - Add some no-install headers to /include - extern -> EXTERNL and vice versa as needed - misc header cleanup - clean up checking for misc. unix vs microsoft functions 13. Change copyright decls in some files to point to LICENSE file. 14. Add notes to RELEASENOTES.md
2017-03-09 08:01:10 +08:00
/*********************************************************************
* Copyright 2016, UCAR/Unidata
* See netcdf/COPYRIGHT file for copying and redistribution conditions.
*********************************************************************/
/*
Type declarations and associated constants
are defined here.
*/
#ifndef D4TYPES_H
#define D4TYPES_H 1
#undef COMPILEBYDEFAULT
#define long64 long long
#define ncerror int
/* Misc. code controls */
#define FILLCONSTRAINT TRUE
#define DEFAULTSTRINGLENGTH 64
/* Size of the checksum */
#define CHECKSUMSIZE 4
/**************************************************/
/* sigh, do the forwards */
typedef struct NCD4INFO NCD4INFO;
typedef enum NCD4CSUM NCD4CSUM;
typedef enum NCD4mode NCD4mode;
typedef enum NCD4translation NCD4translation;
typedef struct NCD4curl NCD4curl;
typedef struct NCD4meta NCD4meta;
typedef struct NCD4globalstate NCD4globalstate;
typedef struct NCD4node NCD4node;
typedef struct NCD4params NCD4params;
/**************************************************/
/* DMR Tree node sorts */
/* Concepts from netcdf-4 data model */
/* Define as powers of 2 so we can create a set */
typedef enum NCD4sort {
NCD4_NULL=0,
NCD4_ATTR=1,
NCD4_ATTRSET=2,
NCD4_XML=4, /* OtherXML */
NCD4_DIM=8,
NCD4_GROUP=16, /* Including Dataset */
NCD4_TYPE=32, /* atom types, opaque, enum, struct or seq */
NCD4_VAR=64, /* Variable or field */
NCD4_ECONST=128,
} NCD4sort;
#define ISA(sort,flags) ((sort) & (flags))
#define ISATTR(sort) ISA((sort),(NCD4_ATTR))
#define ISDIM(sort) ISA((sort),(NCD4_DIM))
#define ISGROUP(sort) ISA((sort),(NCD4_GROUP))
#define ISTYPE(sort) ISA((sort),(NCD4_TYPE))
#define ISVAR(sort) ISA((sort),(NCD4_VAR))
#define ISECONST(sort) ISA((sort),(NCD4_ECONST))
/* Define some nc_type aliases */
#define NC_NULL NC_NAT
#define NC_SEQ NC_VLEN
#define NC_STRUCT NC_COMPOUND
#define ISCMPD(subsort) ((subsort) == NC_SEQ || (subsort) == NC_STRUCT)
/**************************************************/
/* Special attributes; When defining netcdf-4,
these are suppressed, except for UCARTAGMAPS
*/
#define RESERVECHAR '_'
#define UCARTAG "_edu.ucar."
#define UCARTAGVLEN "_edu.ucar.isvlen"
#define UCARTAGOPAQUE "_edu.ucar.opaque.size"
#define UCARTAGORIGTYPE "_edu.ucar.orig.type"
#define UCARTAGUNLIM "_edu.ucar.isunlimited"
/* These are attributes inserted into the netcdf-4 file */
#define NC4TAGMAPS "_edu.ucar.maps"
/**************************************************/
/* Misc.*/
/* Define possible translation modes */
enum NCD4translation {
NCD4_NOTRANS = 0, /* Apply straight DAP4->NetCDF4 translation */
NCD4_TRANSNC4 = 1, /* Use _edu.ucar flags to achieve better translation */
};
/* Define possible debug flags */
#define NCF_DEBUG_NONE 0
#define NCF_DEBUG_COPY 1 /* Dump data into the substrate and close it rather than abortiing it */
/* Define possible retrieval modes */
enum NCD4mode {
NCD4_DMR = 1,
NCD4_DAP = 2,
NCD4_DSR = 4
};
/* Define storage for all the primitive types (plus vlen) */
union ATOMICS {
char i8[8];
unsigned char u8[8];
short i16[4];
unsigned short u16[4];
int i32[2];
unsigned int u32[2];
long long i64[1];
unsigned long long u64[1];
float f32[2];
double f64[1];
#if SIZEOF_VOIDP == 4
char* s[2];
#elif SIZEOF_VOIDP == 8
char* s[1];
#endif
#if (SIZEOF_VOIDP + SIZEOF_SIZE_T) == 8
nc_vlen_t vl[1];
#endif
};
/**************************************************/
/* !Node type for the NetCDF-4 metadata produced from
parsing the DMR tree.
We only use a single node type tagged with the sort.
Some information is not kept (e.g. attributes).
*/
struct NCD4node {
NCD4sort sort; /* gross discriminator */
nc_type subsort; /* subcases of sort */
char* name; /* Raw unescaped */
NCD4node* container; /* parent object: e.g. group, enum, compound...*/
int visited; /* for recursive walks of all nodes */
/* Sort specific fields */
NClist* groups; /* NClist<NCD4node*> groups in group */
NClist* vars; /* NClist<NCD4node*> vars in group, fields in struct/seq */
NClist* types; /* NClist<NCD4node*> types in group */
NClist* dims; /* NClist<NCD4node*>; dimdefs in group, dimrefs in vars */
NClist* attributes; /* NClist<NCD4node*> */
NClist* maps; /* NClist<NCD4node*> */
NClist* xmlattributes; /* NClist<String> */
NCD4node* basetype;
struct { /* sort == NCD4_ATTRIBUTE */
NClist* values;
} attr;
struct { /* sort == NCD4_OPAQUE */
long long size; /* 0 => var length */
} opaque;
struct { /* sort == NCD4_DIMENSION */
long long size;
int isunlimited;
int isanonymous;
} dim;
struct { /* sort == NCD4_ECONST || sort == NCD4_ENUM */
union ATOMICS ecvalue;
NClist* econsts; /* NClist<NCD4node*> */
} en;
struct { /* sort == NCD4_GROUP */
NClist* elements; /* NClist<NCD4node*> everything at the top level in a group */
int isdataset;
char* dapversion;
char* dmrversion;
char* datasetname;
NClist* varbyid; /* NClist<NCD4node*> indexed by varid */
} group;
struct { /* Meta Info */
int id; /* Relevant netcdf id; interpretation depends on sort; */
int isfixedsize; /* sort == NCD4_TYPE; Is this a fixed size (recursively) type? */
d4size_t dapsize; /* size of the type as stored in the dap data; will, as a rule,
be same as memsize only for types <= NC_UINT64 */
nc_type cmpdid; /*netcdf id for the compound type created for seq type */
size_t memsize; /* size of a memory instance without taking dimproduct into account,
but taking compound alignment into account */
d4size_t offset; /* computed structure field offset in memory */
size_t alignment; /* computed structure field alignment in memory */
} meta;
struct { /* Data compilation info */
int flags; /* See d4data for actual flags */
D4blob dap4data; /* offset and start pos for this var's data in serialization */
unsigned int remotechecksum; /* toplevel variable checksum as sent by server*/
unsigned int localchecksum; /* toplevel variable checksum as computed by client */
} data;
struct { /* Track netcdf-4 conversion info */
int isvlen; /* _edu.ucar.isvlen */
/* Split UCARTAGORIGTYPE into group plus name */
struct {
NCD4node* group;
char* name;
} orig;
/* Represented elsewhare: _edu.ucar.opaque.size */
} nc4;
};
/* Tracking info about the serialized input before and after de-chunking */
typedef struct NCD4serial {
size_t rawsize; /* |rawdata| */
void* rawdata;
size_t dapsize; /* |dapdata|; this is transient */
void* dap; /* pointer into rawdata where dap data starts */
char* dmr;/* copy of dmr */
char* errdata; /* null || error chunk (null terminated) */
int hostlittleendian; /* 1 if the host is little endian */
int remotelittleendian; /* 1 if the packet says data is little endian */
int remotechecksumming; /* 1 if the packet says checksums are included */
} NCD4serial;
/* This will be passed out of the parse */
struct NCD4meta {
NCD4INFO* controller;
int ncid; /* root ncid of the substrate netcdf-4 file; copy of NCD4parse argument*/
NCD4node* root;
NCD4mode mode; /* Are we reading DMR (only) or DAP (includes DMR) */
NClist* allnodes; /*list<NCD4node>*/
struct Error { /* Content of any error response */
char* parseerror;
int httpcode;
char* message;
char* context;
char* otherinfo;
} error;
int debuglevel;
NCD4serial serial;
int ignorechecksums; /* 1=> compute but ignore */
int localchecksumming; /* 1=>compute local checksum */
int swap; /* 1 => swap data */
/* Define some "global" (to a DMR) data */
NClist* groupbyid; /* NClist<NCD4node*> indexed by groupid >> 16; this is global */
NCD4node* _bytestring; /* If needed */
};
typedef struct NCD4parser {
char* input;
int debuglevel;
NCD4meta* metadata;
/* Capture useful subsets of dataset->allnodes */
NClist* types; /*list<NCD4node>*/
NClist* dims; /*list<NCD4node>*/
NClist* vars; /*list<NCD4node>*/
NClist* groups; /*list<NCD4node>*/
/* Convenience for short cut fqn detection */
NClist* atomictypes; /*list<NCD4node>*/
NCD4node* dapopaque; /* Single non-fixed-size opaque type */
} NCD4parser;
/**************************************************/
typedef struct NCD4triple {
char* host; /* includes port if specified */
char* key;
char* value;
} NCD4triple;
/**************************************************/
/* Collect global state info in one place */
struct NCD4globalstate {
struct {
int proto_file;
int proto_https;
} curl;
char* tempdir; /* track a usable temp dir */
char* home; /* track $HOME for use in creating $HOME/.oc dir */
struct {
int ignore; /* if 1, then do not use any rc file */
int loaded;
NClist* rc; /*NClist<NCD4triple>; the rc file triple store fields*/
char* rcfile; /* specified rcfile; overrides anything else */
} rc;
};
/* Curl info */
struct NCD4curl {
CURL* curl; /* curl handle*/
NCbytes* packet;
struct errdata {/* Hold info for an error return from server */
char* code;
char* message;
long httpcode;
char errorbuf[CURL_ERROR_SIZE]; /* CURLOPT_ERRORBUFFER*/
} errdata;
struct curlflags {
int proto_file; /* Is file: supported? */
int proto_https; /* is https: supported? */
int compress; /*CURLOPT_ENCODING*/
int verbose; /*CURLOPT_ENCODING*/
int timeout; /*CURLOPT_TIMEOUT*/
int maxredirs; /*CURLOPT_MAXREDIRS*/
char* useragent; /*CURLOPT_USERAGENT*/
/* track which of these are created by oc */
#define COOKIECREATED 1
#define NETRCCREATED 2
int createdflags;
char* cookiejar; /*CURLOPT_COOKIEJAR,CURLOPT_COOKIEFILE*/
char* netrc; /*CURLOPT_NETRC,CURLOPT_NETRC_FILE*/
} curlflags;
struct ssl {
int verifypeer; /* CURLOPT_SSL_VERIFYPEER;
do not do this when cert might be self-signed
or temporarily incorrect */
int verifyhost; /* CURLOPT_SSL_VERIFYHOST; for client-side verification */
char* certificate; /*CURLOPT_SSLCERT*/
char* key; /*CURLOPT_SSLKEY*/
char* keypasswd; /*CURLOPT_SSLKEYPASSWD*/
char* cainfo; /* CURLOPT_CAINFO; certificate authority */
char* capath; /*CURLOPT_CAPATH*/
} ssl;
struct proxy {
char *host; /*CURLOPT_PROXY*/
int port; /*CURLOPT_PROXYPORT*/
char* userpwd; /*CURLOPT_PROXYUSERPWD*/
} proxy;
struct credentials {
char *userpwd; /*CURLOPT_USERPWD*/
} creds;
};
/**************************************************/
/* Define a structure holding common info */
struct NCD4INFO {
NC* controller; /* Parent instance of NCD4INFO */
int debug;
char* rawurltext; /* as given to ncd4_open */
char* urltext; /* as modified by ncd4_open */
NCURI* uri; /* parse of rawuritext */
NCD4curl* curl;
int inmemory; /* store fetched data in memory? */
struct {
char* memory; /* allocated memory if ONDISK is not set */
char* ondiskfilename; /* If ONDISK is set */
FILE* ondiskfile; /* ditto */
d4size_t datasize; /* size on disk or in memory */
long dmrlastmodified;
long daplastmodified;
} data;
struct {
char* filename; /* of the substrate file */
int nc4id; /* substrate nc4 file ncid used to hold metadata; not same as external id */
NCD4meta* metadata;
} substrate;
struct {
NCCONTROLS flags;
NCCONTROLS debugflags;
NCD4translation translation;
char substratename[NC_MAX_NAME];
} controls;
};
#endif /*D4TYPES_H*/