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netcdf-c/ncdump/CMakeLists.txt

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ncdump, other directories updated with copyright stanza.
2018-12-07 06:36:53 +08:00
# Copyright 1993, 1994, 1995, 1996, 1997, 1998, 1999, 2000, 2001, 2002,
# 2003, 2004, 2005, 2006, 2007, 2008, 2009, 2010, 2011, 2012, 2013, 2014,
# 2015, 2016, 2017, 2018
# University Corporation for Atmospheric Research/Unidata.
# See netcdf-c/COPYRIGHT file for more info.
Fix undefined references when using Visual Studio Fix Issue https://github.com/Unidata/netcdf-c/issues/1725. Replace PR https://github.com/Unidata/netcdf-c/pull/1726 Also replace PR https://github.com/Unidata/netcdf-c/pull/1694 The general problem is that under Visual Studio, we are seeing a number of undefined reference and other scoping errors. The reason is that the code is not properly using Visual Studio _declspec() declarations. The basic solution is to ensure that when compiling the code itself one needs to ensure that _declspec(dllexport) is used. There are several sets of macros to handle this, but they all rely on the flag DLL_EXPORT being define when the code is compiled, but not being defined when the code is used via a .h file. As a test, I modified XGetOpt.c to build properly. I also fixed the oc2 library to properly _declspec things like ocdebug. I also made some misc. changes to get all the tests to run if cygwin is installed (to get bash, sed, etc). Misc. Changes: * Put XGetOpt.c into libsrc and copy at build time to the other directories where it is needed.
2020-05-19 09:36:28 +08:00
#IF(BUILD_SHARED_LIBS AND WIN32)
# remove_definitions(-DDLL_EXPORT)
# remove_definitions(-DDLL_NETCDF)
#ENDIF()
CMake-related updated.
2012-08-07 00:57:29 +08:00
Added new tests, CMake functionality.
2012-08-22 04:08:53 +08:00
SET(ncdump_FILES ncdump.c vardata.c dumplib.c indent.c nctime0.c utils.c nciter.c)
This PR primarily addresses Issue https://github.com/Unidata/netcdf-c/issues/725. After a long discussion, I implemented the rules at the end of that issue. They are documented in nccopy.1. Additionally, I added a new, per-variable, -c flag that allows for the direct setting of the chunking parameters for a variable. The form is -c var:c1,c2,...ck where var is the name of the variable (possibly a fully qualified name) and the ci are the chunksizes for that variable. It must be the case that the rank of the variable is k. If the new form is used as well as the old form, then the new form overrides the old form for the specified variable. Note that multiple occurrences of the new form -c flag may be specified. Misc. Other fixes 1. Added -M <size> option to nccopy to specify the minimum allowable chunksize. 2. Removed the unused variables from bigmeta.c (Issue https://github.com/Unidata/netcdf-c/issues/1079) 3. Fixed failure of nc_test4/tst_filter.sh by using the new -M flag (#1) to allow filter test on a small chunk size.
2018-07-27 10:16:02 +08:00
SET(nccopy_FILES nccopy.c nciter.c chunkspec.c utils.c dimmap.c list.c)
Added ocprint binary to cmakelists.
2018-08-01 02:51:24 +08:00
SET(ocprint_FILES ocprint.c)
Add Wei-King Liao's ncvalidator program Add Wei-King Liao's ncvalidator program (with his permission) as an uninstalled (for now) tool in the ncdump directory. It has in the past been useful for debugging netcdf-3 files.
2019-03-24 04:02:39 +08:00
SET(ncvalidator_FILES ncvalidator.c)
Going back and adding additional tests to CMake config files.
2012-08-08 06:58:15 +08:00
2012-09-14 04:41:54 +08:00
IF(USE_X_GETOPT)
Updating cmake shared_linker_flags as suggested by Nico Schlomer: https://github.com/Unidata/netcdf-c/issues/46 Fixed indentation. Updated .gitignore. Added a macro to make it easy to check to see if the linker supports a particular flag. Debug builds now pass the -w1,--no-undefined if it is detected the linker supports it.
2014-04-03 04:26:42 +08:00
SET(ncdump_FILES ${ncdump_FILES} XGetopt.c)
SET(nccopy_FILES ${nccopy_FILES} XGetopt.c)
Added ocprint binary to cmakelists.
2018-08-01 02:51:24 +08:00
SET(ocprint_FILES ${ocprint_FILES} XGetopt.c)
Add Wei-King Liao's ncvalidator program Add Wei-King Liao's ncvalidator program (with his permission) as an uninstalled (for now) tool in the ncdump directory. It has in the past been useful for debugging netcdf-3 files.
2019-03-24 04:02:39 +08:00
SET(ncvalidator_FILES ${ncvalidator_FILES} XGetopt.c)
Additional CMake usage.
2012-09-14 02:27:23 +08:00
ENDIF()
Additional CMake changes.
2012-08-04 06:24:29 +08:00
ADD_EXECUTABLE(ncdump ${ncdump_FILES})
ADD_EXECUTABLE(nccopy ${nccopy_FILES})
Add Wei-King Liao's ncvalidator program Add Wei-King Liao's ncvalidator program (with his permission) as an uninstalled (for now) tool in the ncdump directory. It has in the past been useful for debugging netcdf-3 files.
2019-03-24 04:02:39 +08:00
ADD_EXECUTABLE(ncvalidator ${ncvalidator_FILES})
Fence-posted ocprint behind a DAP conditional, in support of https://github.com/Unidata/netcdf-c/commit/bf6ae6c59153dd2d36dbdf7793e29f824a98a20d#commitcomment-29912584
2018-08-02 04:15:01 +08:00
IF(ENABLE_DAP)
ADD_EXECUTABLE(ocprint ${ocprint_FILES})
ENDIF(ENABLE_DAP)
Additional CMake changes.
2012-08-04 06:24:29 +08:00
2012-08-11 05:44:00 +08:00
TARGET_LINK_LIBRARIES(ncdump netcdf ${ALL_TLL_LIBS})
TARGET_LINK_LIBRARIES(nccopy netcdf ${ALL_TLL_LIBS})
Add Wei-King Liao's ncvalidator program Add Wei-King Liao's ncvalidator program (with his permission) as an uninstalled (for now) tool in the ncdump directory. It has in the past been useful for debugging netcdf-3 files.
2019-03-24 04:02:39 +08:00
TARGET_LINK_LIBRARIES(ncvalidator netcdf ${ALL_TLL_LIBS})
Fence-posted ocprint behind a DAP conditional, in support of https://github.com/Unidata/netcdf-c/commit/bf6ae6c59153dd2d36dbdf7793e29f824a98a20d#commitcomment-29912584
2018-08-02 04:15:01 +08:00
IF(ENABLE_DAP)
TARGET_LINK_LIBRARIES(ocprint netcdf ${ALL_TLL_LIBS})
ENDIF(ENABLE_DAP)
Additional CMake changes.
2012-08-04 06:24:29 +08:00
Updated CMakelists to remove debug, release subdirectories on Windows. Updating shell scripts to work with MSYS paths.
2015-01-28 04:57:51 +08:00
####
# We have to do a little tweaking
# to remove the Release/ and Debug/ directories
# in MSVC builds. This is required to get
# test scripts to work.
####
IF(MSVC)
Added tst_bug324 to CMake-based builds, but it is failing for some reason. Will investigate shortly.
2015-02-05 05:11:20 +08:00
SET_TARGET_PROPERTIES(ncdump PROPERTIES RUNTIME_OUTPUT_DIRECTORY
Updated CMakelists to remove debug, release subdirectories on Windows. Updating shell scripts to work with MSYS paths.
2015-01-28 04:57:51 +08:00
${CMAKE_CURRENT_BINARY_DIR})
Added tst_bug324 to CMake-based builds, but it is failing for some reason. Will investigate shortly.
2015-02-05 05:11:20 +08:00
SET_TARGET_PROPERTIES(ncdump PROPERTIES RUNTIME_OUTPUT_DIRECTORY_DEBUG
Updated CMakelists to remove debug, release subdirectories on Windows. Updating shell scripts to work with MSYS paths.
2015-01-28 04:57:51 +08:00
${CMAKE_CURRENT_BINARY_DIR})
SET_TARGET_PROPERTIES(ncdump PROPERTIES RUNTIME_OUTPUT_DIRECTORY_RELEASE
${CMAKE_CURRENT_BINARY_DIR})
Added tst_bug324 to CMake-based builds, but it is failing for some reason. Will investigate shortly.
2015-02-05 05:11:20 +08:00
SET_TARGET_PROPERTIES(nccopy PROPERTIES RUNTIME_OUTPUT_DIRECTORY
Updated CMakelists to remove debug, release subdirectories on Windows. Updating shell scripts to work with MSYS paths.
2015-01-28 04:57:51 +08:00
${CMAKE_CURRENT_BINARY_DIR})
Added tst_bug324 to CMake-based builds, but it is failing for some reason. Will investigate shortly.
2015-02-05 05:11:20 +08:00
SET_TARGET_PROPERTIES(nccopy PROPERTIES RUNTIME_OUTPUT_DIRECTORY_DEBUG
Updated CMakelists to remove debug, release subdirectories on Windows. Updating shell scripts to work with MSYS paths.
2015-01-28 04:57:51 +08:00
${CMAKE_CURRENT_BINARY_DIR})
SET_TARGET_PROPERTIES(nccopy PROPERTIES RUNTIME_OUTPUT_DIRECTORY_RELEASE
${CMAKE_CURRENT_BINARY_DIR})
Added ocprint binary to cmakelists.
2018-08-01 02:51:24 +08:00
Add Wei-King Liao's ncvalidator program Add Wei-King Liao's ncvalidator program (with his permission) as an uninstalled (for now) tool in the ncdump directory. It has in the past been useful for debugging netcdf-3 files.
2019-03-24 04:02:39 +08:00
SET_TARGET_PROPERTIES(ncvalidator PROPERTIES RUNTIME_OUTPUT_DIRECTORY
${CMAKE_CURRENT_BINARY_DIR})
SET_TARGET_PROPERTIES(ncvalidator PROPERTIES RUNTIME_OUTPUT_DIRECTORY_DEBUG
${CMAKE_CURRENT_BINARY_DIR})
SET_TARGET_PROPERTIES(ncvalidator PROPERTIES RUNTIME_OUTPUT_DIRECTORY_RELEASE
${CMAKE_CURRENT_BINARY_DIR})
Fence-posted ocprint behind a DAP conditional, in support of https://github.com/Unidata/netcdf-c/commit/bf6ae6c59153dd2d36dbdf7793e29f824a98a20d#commitcomment-29912584
2018-08-02 04:15:01 +08:00
IF(ENABLE_DAP)
Added ocprint binary to cmakelists.
2018-08-01 02:51:24 +08:00
SET_TARGET_PROPERTIES(ocprint PROPERTIES RUNTIME_OUTPUT_DIRECTORY
Fence-posted ocprint behind a DAP conditional, in support of https://github.com/Unidata/netcdf-c/commit/bf6ae6c59153dd2d36dbdf7793e29f824a98a20d#commitcomment-29912584
2018-08-02 04:15:01 +08:00
${CMAKE_CURRENT_BINARY_DIR})
SET_TARGET_PROPERTIES(ocprint PROPERTIES RUNTIME_OUTPUT_DIRECTORY_DEBUG
${CMAKE_CURRENT_BINARY_DIR})
SET_TARGET_PROPERTIES(ocprint PROPERTIES RUNTIME_OUTPUT_DIRECTORY_RELEASE
${CMAKE_CURRENT_BINARY_DIR})
ENDIF(ENABLE_DAP)
Updated CMakelists to remove debug, release subdirectories on Windows. Updating shell scripts to work with MSYS paths.
2015-01-28 04:57:51 +08:00
ENDIF()
Going back and adding additional tests to CMake config files.
2012-08-08 06:58:15 +08:00
IF(ENABLE_TESTS)
Updating cmake shared_linker_flags as suggested by Nico Schlomer: https://github.com/Unidata/netcdf-c/issues/46 Fixed indentation. Updated .gitignore. Added a macro to make it easy to check to see if the linker supports a particular flag. Debug builds now pass the -w1,--no-undefined if it is detected the linker supports it.
2014-04-03 04:26:42 +08:00
ADD_EXECUTABLE(rewrite-scalar rewrite-scalar.c)
ADD_EXECUTABLE(bom bom.c)
Forgot to check cmake build
2016-01-06 13:26:20 +08:00
ADD_EXECUTABLE(tst_dimsizes tst_dimsizes.c)
Primary change: add dap4 support Specific changes: 1. Add dap4 code: libdap4 and dap4_test. Note that until the d4ts server problem is solved, dap4 is turned off. 2. Modify various files to support dap4 flags: configure.ac, Makefile.am, CMakeLists.txt, etc. 3. Add nc_test/test_common.sh. This centralizes the handling of the locations of various things in the build tree: e.g. where is ncgen.exe located. See nc_test/test_common.sh for details. 4. Modify .sh files to use test_common.sh 5. Obsolete separate oc2 by moving it to be part of netcdf-c. This means replacing code with netcdf-c equivalents. 5. Add --with-testserver to configure.ac to allow override of the servers to be used for --enable-dap-remote-tests. 6. There were multiple versions of nctypealignment code. Try to centralize in libdispatch/doffset.c and include/ncoffsets.h 7. Add a unit test for the ncuri code because of its complexity. 8. Move the findserver code out of libdispatch and into a separate, self contained program in ncdap_test and dap4_test. 9. Move the dispatch header files (nc{3,4}dispatch.h) to .../include because they are now shared by modules. 10. Revamp the handling of TOPSRCDIR and TOPBUILDDIR for shell scripts. 11. Make use of MREMAP if available 12. Misc. minor changes e.g. - #include <config.h> -> #include "config.h" - Add some no-install headers to /include - extern -> EXTERNL and vice versa as needed - misc header cleanup - clean up checking for misc. unix vs microsoft functions 13. Change copyright decls in some files to point to LICENSE file. 14. Add notes to RELEASENOTES.md
2017-03-09 08:01:10 +08:00
ADD_EXECUTABLE(nctrunc nctrunc.c)
Updating cmake shared_linker_flags as suggested by Nico Schlomer: https://github.com/Unidata/netcdf-c/issues/46 Fixed indentation. Updated .gitignore. Added a macro to make it easy to check to see if the linker supports a particular flag. Debug builds now pass the -w1,--no-undefined if it is detected the linker supports it.
2014-04-03 04:26:42 +08:00
TARGET_LINK_LIBRARIES(rewrite-scalar netcdf)
TARGET_LINK_LIBRARIES(bom netcdf)
Forgot to check cmake build
2016-01-06 13:26:20 +08:00
TARGET_LINK_LIBRARIES(tst_dimsizes netcdf)
Work progresses, but have encountered an issue. See https://github.com/Unidata/netcdf-c/issues/103.
2015-01-28 05:20:24 +08:00
Had to modify test_common.in so that it doesn't append the build type on Visual Studio. Otherwise it looks in the wrong location. Change the location of the utilities so that they are where test_common.sh expects to find them results in the breakage of most of the other shell scripts.
2017-04-07 04:55:11 +08:00
IF(USE_NETCDF4)
ADD_EXECUTABLE(tst_fileinfo tst_fileinfo.c)
TARGET_LINK_LIBRARIES(tst_fileinfo netcdf)
ENDIF()
Add provenance info for netcdf-4 files. This consists of a persistent attribute named _NCProperties plus two computed attributes _IsNetcdf4 and _SuperblockVersion. See the 'Provenance Attributes' section of docs/attribute_conventions.md for details.
2016-05-04 11:17:06 +08:00
Had to modify test_common.in so that it doesn't append the build type on Visual Studio. Otherwise it looks in the wrong location. Change the location of the utilities so that they are where test_common.sh expects to find them results in the breakage of most of the other shell scripts.
2017-04-07 04:55:11 +08:00
IF(MSVC)
SET_TARGET_PROPERTIES(rewrite-scalar PROPERTIES RUNTIME_OUTPUT_DIRECTORY
${CMAKE_CURRENT_BINARY_DIR})
SET_TARGET_PROPERTIES(rewrite-scalar PROPERTIES RUNTIME_OUTPUT_DIRECTORY_DEBUG
${CMAKE_CURRENT_BINARY_DIR})
SET_TARGET_PROPERTIES(rewrite-scalar PROPERTIES RUNTIME_OUTPUT_DIRECTORY_RELEASE
${CMAKE_CURRENT_BINARY_DIR})
Work progresses, but have encountered an issue. See https://github.com/Unidata/netcdf-c/issues/103.
2015-01-28 05:20:24 +08:00
Had to modify test_common.in so that it doesn't append the build type on Visual Studio. Otherwise it looks in the wrong location. Change the location of the utilities so that they are where test_common.sh expects to find them results in the breakage of most of the other shell scripts.
2017-04-07 04:55:11 +08:00
SET_TARGET_PROPERTIES(bom PROPERTIES RUNTIME_OUTPUT_DIRECTORY
${CMAKE_CURRENT_BINARY_DIR})
SET_TARGET_PROPERTIES(bom PROPERTIES RUNTIME_OUTPUT_DIRECTORY_DEBUG
${CMAKE_CURRENT_BINARY_DIR})
SET_TARGET_PROPERTIES(bom PROPERTIES RUNTIME_OUTPUT_DIRECTORY_RELEASE
${CMAKE_CURRENT_BINARY_DIR})
Forgot to check cmake build
2016-01-06 13:26:20 +08:00
Had to modify test_common.in so that it doesn't append the build type on Visual Studio. Otherwise it looks in the wrong location. Change the location of the utilities so that they are where test_common.sh expects to find them results in the breakage of most of the other shell scripts.
2017-04-07 04:55:11 +08:00
SET_TARGET_PROPERTIES(tst_dimsizes PROPERTIES RUNTIME_OUTPUT_DIRECTORY
${CMAKE_CURRENT_BINARY_DIR})
SET_TARGET_PROPERTIES(tst_dimsizes PROPERTIES RUNTIME_OUTPUT_DIRECTORY_DEBUG
${CMAKE_CURRENT_BINARY_DIR})
SET_TARGET_PROPERTIES(tst_dimsizes PROPERTIES RUNTIME_OUTPUT_DIRECTORY_RELEASE
${CMAKE_CURRENT_BINARY_DIR})
Modified ncdap_test to allow a different method to get TOPSRCDIR that avoids use of TEST_ENVIRONMENT and makes automake and cmake more consistent. Basic assumption is that abs_top_srcdir (and cmake equivalent) is known at 'make check' time, so we can use -D flag to compile a program that has the value of abs_top_srcdir embedded into it as a constant. We define two new files in ncdap_test: 1. t_srcdir.h -- provide a gettopsrcdir() function to return the topsrcdir value to the test program. 2. topsrcdir.c -- a program that calls gettopsrcdir() and prints its output (minus any newline) on stdout. This is used in .sh files to get topsrcdir.
2017-01-19 12:46:47 +08:00
Had to modify test_common.in so that it doesn't append the build type on Visual Studio. Otherwise it looks in the wrong location. Change the location of the utilities so that they are where test_common.sh expects to find them results in the breakage of most of the other shell scripts.
2017-04-07 04:55:11 +08:00
SET_TARGET_PROPERTIES(nctrunc PROPERTIES RUNTIME_OUTPUT_DIRECTORY
We are now into the trial and error phase trying to get travis to compile tst_fileinfo.
2017-01-20 00:59:17 +08:00
${CMAKE_CURRENT_BINARY_DIR})
Had to modify test_common.in so that it doesn't append the build type on Visual Studio. Otherwise it looks in the wrong location. Change the location of the utilities so that they are where test_common.sh expects to find them results in the breakage of most of the other shell scripts.
2017-04-07 04:55:11 +08:00
SET_TARGET_PROPERTIES(nctrunc PROPERTIES RUNTIME_OUTPUT_DIRECTORY_DEBUG
We are now into the trial and error phase trying to get travis to compile tst_fileinfo.
2017-01-20 00:59:17 +08:00
${CMAKE_CURRENT_BINARY_DIR})
Had to modify test_common.in so that it doesn't append the build type on Visual Studio. Otherwise it looks in the wrong location. Change the location of the utilities so that they are where test_common.sh expects to find them results in the breakage of most of the other shell scripts.
2017-04-07 04:55:11 +08:00
SET_TARGET_PROPERTIES(nctrunc PROPERTIES RUNTIME_OUTPUT_DIRECTORY_RELEASE
We are now into the trial and error phase trying to get travis to compile tst_fileinfo.
2017-01-20 00:59:17 +08:00
${CMAKE_CURRENT_BINARY_DIR})
Had to modify test_common.in so that it doesn't append the build type on Visual Studio. Otherwise it looks in the wrong location. Change the location of the utilities so that they are where test_common.sh expects to find them results in the breakage of most of the other shell scripts.
2017-04-07 04:55:11 +08:00
IF(USE_NETCDF4)
SET_TARGET_PROPERTIES(tst_fileinfo PROPERTIES RUNTIME_OUTPUT_DIRECTORY
${CMAKE_CURRENT_BINARY_DIR})
SET_TARGET_PROPERTIES(tst_fileinfo PROPERTIES RUNTIME_OUTPUT_DIRECTORY_DEBUG
${CMAKE_CURRENT_BINARY_DIR})
SET_TARGET_PROPERTIES(tst_fileinfo PROPERTIES RUNTIME_OUTPUT_DIRECTORY_RELEASE
${CMAKE_CURRENT_BINARY_DIR})
ENDIF(USE_NETCDF4)
Working out issues on Windows.
2017-12-13 00:44:22 +08:00
ENDIF(MSVC)
Work progresses, but have encountered an issue. See https://github.com/Unidata/netcdf-c/issues/103.
2015-01-28 05:20:24 +08:00
Updating cmake shared_linker_flags as suggested by Nico Schlomer: https://github.com/Unidata/netcdf-c/issues/46 Fixed indentation. Updated .gitignore. Added a macro to make it easy to check to see if the linker supports a particular flag. Debug builds now pass the -w1,--no-undefined if it is detected the linker supports it.
2014-04-03 04:26:42 +08:00
# Base tests
# The tests are set up as a combination of shell scripts and executables that
# must be run in a particular order. It is painful but will use macros to help
# keep it from being too bad.
Added tst_bug324 to CMake-based builds, but it is failing for some reason. Will investigate shortly.
2015-02-05 05:11:20 +08:00
Updating cmake shared_linker_flags as suggested by Nico Schlomer: https://github.com/Unidata/netcdf-c/issues/46 Fixed indentation. Updated .gitignore. Added a macro to make it easy to check to see if the linker supports a particular flag. Debug builds now pass the -w1,--no-undefined if it is detected the linker supports it.
2014-04-03 04:26:42 +08:00
## Start adding tests in the appropriate order
working on cmake build
2017-11-17 08:43:21 +08:00
add_sh_test(ncdump run_tests)
add_sh_test(ncdump tst_64bit)
working on cmake build
2017-11-17 08:54:30 +08:00
add_bin_test_no_prefix(ref_ctest)
add_bin_test_no_prefix(ref_ctest64)
Updating cmake shared_linker_flags as suggested by Nico Schlomer: https://github.com/Unidata/netcdf-c/issues/46 Fixed indentation. Updated .gitignore. Added a macro to make it easy to check to see if the linker supports a particular flag. Debug builds now pass the -w1,--no-undefined if it is detected the linker supports it.
2014-04-03 04:26:42 +08:00
add_sh_test(ncdump tst_output)
add_sh_test(ncdump tst_lengths)
add_sh_test(ncdump tst_calendars)
changed ncdump C test to build but not run (again) under CMake build
2017-11-25 17:57:13 +08:00
build_bin_test_no_prefix(tst_utf8)
Updating cmake shared_linker_flags as suggested by Nico Schlomer: https://github.com/Unidata/netcdf-c/issues/46 Fixed indentation. Updated .gitignore. Added a macro to make it easy to check to see if the linker supports a particular flag. Debug builds now pass the -w1,--no-undefined if it is detected the linker supports it.
2014-04-03 04:26:42 +08:00
add_sh_test(ncdump run_utf8_tests)
Tweaked some tests so that everything would pass when netcdf4 was disabled.
2015-10-23 04:09:19 +08:00
IF(USE_NETCDF4)
add_sh_test(ncdump run_utf8_nc4_tests)
We are now into the trial and error phase trying to get travis to compile tst_fileinfo.
2017-01-20 00:59:17 +08:00
add_sh_test(ncdump tst_fileinfo)
re e-support UBS-599337 re pull request https://github.com/Unidata/netcdf-c/pull/405 re pull request https://github.com/Unidata/netcdf-c/pull/446 Notes: 1. This branch is a cleanup of the magic.dmh branch. 2. magic.dmh was originally merged, but caused problems with parallel IO. It was re-issued as pull request https://github.com/Unidata/netcdf-c/pull/446. 3. This branch + pull request replace any previous pull requests and magic.dmh branch. Given an otherwise valid netCDF file that has a corrupted header, the netcdf library currently crashes. Instead, it should return NC_ENOTNC. Additionally, the NC_check_file_type code does not do the forward search required by hdf5 files. It currently only looks at file position 0 instead of 512, 1024, 2048,... Also, it turns out that the HDF4 magic number is assumed to always be at the beginning of the file (unlike HDF5). The change is localized to libdispatch/dfile.c See https://support.hdfgroup.org/release4/doc/DSpec_html/DS.pdf Also, it turns out that the code in NC_check_file_type is duplicated (mostly) in the function libsrc4/nc4file.c#nc_check_for_hdf. This branch does the following. 1. Make NC_check_file_type return NC_ENOTNC instead of crashing. 2. Remove nc_check_for_hdf and centralize all file format checking NC_check_file_type. 3. Add proper forward search for HDF5 files (but not HDF4 files) to look for the magic number at offsets of 0, 512, 1024... 4. Add test tst_hdf5_offset.sh. This tests that hdf5 files with an offset are properly recognized. It does so by prefixing a legal file with some number of zero bytes: 512, 1024, etc. 5. Off-topic: Added -N flag to ncdump to force a specific output dataset name.
2017-10-25 06:25:09 +08:00
add_sh_test(ncdump tst_hdf5_offset)
Tweaked some tests so that everything would pass when netcdf4 was disabled.
2015-10-23 04:09:19 +08:00
ENDIF(USE_NETCDF4)
Syntax fix
2020-03-12 02:58:56 +08:00
add_sh_test(ncdump test_unicode_directory)
Tweaked some tests so that everything would pass when netcdf4 was disabled.
2015-10-23 04:09:19 +08:00
Added expected failure to cmake-based tests.
2017-11-21 08:02:16 +08:00
add_sh_test(ncdump tst_null_byte_padding)
IF(USE_STRICT_NULL_BYTE_HEADER_PADDING)
SET_TESTS_PROPERTIES(ncdump_tst_null_byte_padding PROPERTIES WILL_FAIL TRUE)
ENDIF(USE_STRICT_NULL_BYTE_HEADER_PADDING)
Wiring in a quick test.
2017-11-21 04:52:06 +08:00
Updating cmake shared_linker_flags as suggested by Nico Schlomer: https://github.com/Unidata/netcdf-c/issues/46 Fixed indentation. Updated .gitignore. Added a macro to make it easy to check to see if the linker supports a particular flag. Debug builds now pass the -w1,--no-undefined if it is detected the linker supports it.
2014-04-03 04:26:42 +08:00
add_sh_test(ncdump tst_nccopy3)
netcdf-c: Make cmake pass a windows cmd prompt add_sh_test only creates the test if HAVE_BASH is TRUE. Therefore we can only call SET_TESTS_PROPERTIES on the created test if HAVE_BASH is equally true.
2018-04-26 18:36:26 +08:00
IF(HAVE_BASH)
SET_TESTS_PROPERTIES(ncdump_tst_nccopy3 PROPERTIES RUN_SERIAL TRUE)
ENDIF(HAVE_BASH)
Configuring a test so that it won't fail during parallel testing.
2017-12-07 06:00:21 +08:00
Wired in new test to CMake-based build.
2017-09-02 01:58:37 +08:00
add_sh_test(ncdump tst_nccopy3_subset)
Updating cmake shared_linker_flags as suggested by Nico Schlomer: https://github.com/Unidata/netcdf-c/issues/46 Fixed indentation. Updated .gitignore. Added a macro to make it easy to check to see if the linker supports a particular flag. Debug builds now pass the -w1,--no-undefined if it is detected the linker supports it.
2014-04-03 04:26:42 +08:00
add_sh_test(ncdump tst_charfill)
Removed a shell test when using visual studio. The test script manually invokes the compiler gcc.
2015-01-31 00:40:48 +08:00
Added ncdump test tst_inmemory into CMake config file.
2015-05-30 03:34:35 +08:00
add_sh_test(ncdump tst_formatx3)
add_sh_test(ncdump tst_bom)
Fix issues with Github pull request 187 (https://github.com/Unidata/netcdf-c/pull/187) Primary problem was cmake build errors.
2016-01-09 03:55:11 +08:00
add_sh_test(ncdump tst_dimsizes)
Had to modify test_common.in so that it doesn't append the build type on Visual Studio. Otherwise it looks in the wrong location. Change the location of the utilities so that they are where test_common.sh expects to find them results in the breakage of most of the other shell scripts.
2017-04-07 04:55:11 +08:00
Activated a couple new tests on MSVC builds when bash is available.
2015-04-21 06:06:20 +08:00
# The following test script invokes
# gcc directly.
IF(CMAKE_COMPILER_IS_GNUCC OR APPLE)
Added ncdump test tst_inmemory into CMake config file.
2015-05-30 03:34:35 +08:00
IF(ENABLE_LARGE_FILE_TESTS)
Activated a couple new tests on MSVC builds when bash is available.
2015-04-21 06:06:20 +08:00
add_sh_test(ncdump tst_iter)
Added ncdump test tst_inmemory into CMake config file.
2015-05-30 03:34:35 +08:00
ENDIF(ENABLE_LARGE_FILE_TESTS)
ENDIF(CMAKE_COMPILER_IS_GNUCC OR APPLE)
Removed a shell test when using visual studio. The test script manually invokes the compiler gcc.
2015-01-31 00:40:48 +08:00
Fix https://github.com/Unidata/netcdf-c/issues/963 Fix https://github.com/Unidata/netcdf-c/issues/962 1. remove the --disable-diskless option since it is no longer needed. Similarly for CMakeLists.txt. 2. Fixed nc4files.c where BAIL and return were mixed leading to situation where cleanup code was not being invoked. This probably occurs elsewhere, but I did not find any specifically.
2018-05-12 05:30:19 +08:00
add_sh_test(ncdump tst_inmemory_nc3)
Fix nccopy to use NC_PERSIST so that -w actually persists the output. re: Issue https://github.com/Unidata/netcdf-c/issues/1365 At some point (4.6.1) we changed the diskless handling of flags and added a new NC_PERSIST flag. Looks like we did not fix all occurrences of the old flag set, specifically for 'nccopy -w' command. Also added some tests (tst_nccopy_w{3,4}.sh) for this situation.
2019-03-16 02:05:27 +08:00
add_sh_test(ncdump tst_nccopy_w3)
Fix https://github.com/Unidata/netcdf-c/issues/963 Fix https://github.com/Unidata/netcdf-c/issues/962 1. remove the --disable-diskless option since it is no longer needed. Similarly for CMakeLists.txt. 2. Fixed nc4files.c where BAIL and return were mixed leading to situation where cleanup code was not being invoked. This probably occurs elsewhere, but I did not find any specifically.
2018-05-12 05:30:19 +08:00
IF(USE_NETCDF4)
More refactoring to fix an issue where an nc4 test was being run when nc4 was disabled.
2015-11-07 04:20:10 +08:00
add_sh_test(ncdump tst_inmemory_nc4)
Fix nccopy to use NC_PERSIST so that -w actually persists the output. re: Issue https://github.com/Unidata/netcdf-c/issues/1365 At some point (4.6.1) we changed the diskless handling of flags and added a new NC_PERSIST flag. Looks like we did not fix all occurrences of the old flag set, specifically for 'nccopy -w' command. Also added some tests (tst_nccopy_w{3,4}.sh) for this situation.
2019-03-16 02:05:27 +08:00
add_sh_test(ncdump tst_nccopy_w4)
Fix https://github.com/Unidata/netcdf-c/issues/963 Fix https://github.com/Unidata/netcdf-c/issues/962 1. remove the --disable-diskless option since it is no longer needed. Similarly for CMakeLists.txt. 2. Fixed nc4files.c where BAIL and return were mixed leading to situation where cleanup code was not being invoked. This probably occurs elsewhere, but I did not find any specifically.
2018-05-12 05:30:19 +08:00
ENDIF(USE_NETCDF4)
Added tst_bug324 to CMake-based builds, but it is failing for some reason. Will investigate shortly.
2015-02-05 05:11:20 +08:00
Updating cmake shared_linker_flags as suggested by Nico Schlomer: https://github.com/Unidata/netcdf-c/issues/46 Fixed indentation. Updated .gitignore. Added a macro to make it easy to check to see if the linker supports a particular flag. Debug builds now pass the -w1,--no-undefined if it is detected the linker supports it.
2014-04-03 04:26:42 +08:00
IF(USE_NETCDF4)
changed ncdump C test to build but not run (again) under CMake build
2017-11-25 17:57:13 +08:00
build_bin_test_no_prefix(tst_create_files)
build_bin_test_no_prefix(tst_group_data)
build_bin_test_no_prefix(tst_enum_data)
build_bin_test_no_prefix(tst_opaque_data)
build_bin_test_no_prefix(tst_string_data)
build_bin_test_no_prefix(tst_vlen_data)
build_bin_test_no_prefix(tst_comp)
build_bin_test_no_prefix(tst_comp2)
build_bin_test_no_prefix(tst_nans)
build_bin_test_no_prefix(tst_h_scalar)
Updating cmake shared_linker_flags as suggested by Nico Schlomer: https://github.com/Unidata/netcdf-c/issues/46 Fixed indentation. Updated .gitignore. Added a macro to make it easy to check to see if the linker supports a particular flag. Debug builds now pass the -w1,--no-undefined if it is detected the linker supports it.
2014-04-03 04:26:42 +08:00
add_sh_test(ncdump tst_formatx4)
# Add this test by hand, as it is also called from a script.
# Editing the script would break autotools compatibility.
changed ncdump C test to build but not run (again) under CMake build
2017-11-25 17:57:13 +08:00
build_bin_test_no_prefix(tst_special_atts)
build_bin_test_no_prefix(tst_compress)
build_bin_test_no_prefix(tst_chunking)
working on cmake build
2017-11-17 08:54:30 +08:00
Ensuring run_back_comp_tests.sh only runs if netcdf4 is enabled.
2016-04-29 04:41:42 +08:00
###
# This test fails on Visual Studio builds with bash.
# It passes, but technically fails because the scientific
# formatting omits a 0.
###
Working out issues on Windows.
2017-12-13 00:44:22 +08:00
IF(EXTRA_TESTS)
Ensuring run_back_comp_tests.sh only runs if netcdf4 is enabled.
2016-04-29 04:41:42 +08:00
add_sh_test(ncdump run_back_comp_tests)
Working out issues on Windows.
2017-12-13 00:44:22 +08:00
IF(MSVC)
SET_TESTS_PROPERTIES(ncdump_run_back_comp_tests PROPERTIES WILL_FAIL TRUE)
ENDIF(MSVC)
ENDIF(EXTRA_TESTS)
Ensuring run_back_comp_tests.sh only runs if netcdf4 is enabled.
2016-04-29 04:41:42 +08:00
Activated a couple new tests on MSVC builds when bash is available.
2015-04-21 06:06:20 +08:00
# Known failure on MSVC; the number of 0's padding
# is different, but the result is actually correct.
Make certain tests conditional on dependencies tst_h_rdc0 depends on ncdump_tst_netcdf4, which isn't build if HAVE_BASH isn't true. But CMake errors out with: -- Bash shell not found; disabling shell script tests. CMake Error at CMakeLists.txt:1521 (SET_PROPERTY): SET_PROPERTY given TEST names that do not exist: tst_h_rdc0 There are also some tests which cdl_do_maps depends on, but it is also not defined if HAVE_BASH isn't true. CMake errors out with: CMake Error at examples/CDL/CMakeLists.txt:10 (SET_TESTS_PROPERTIES): SET_TESTS_PROPERTIES Can not find test to add properties to: cdl_do_comps This patch makes these tests conditional, making CMake happy.
2017-11-26 04:49:05 +08:00
IF(HAVE_BASH)
add_sh_test(ncdump tst_netcdf4)
build_bin_test_no_prefix(tst_h_rdc0)
ENDIF()
Added tst_netcdf4, tst_h_rdc0 to CMake build system.
2015-04-21 03:18:24 +08:00
changed ncdump C test to build but not run (again) under CMake build
2017-11-25 17:57:13 +08:00
build_bin_test_no_prefix(tst_unicode)
Added tst_netcdf4, tst_h_rdc0 to CMake build system.
2015-04-21 03:18:24 +08:00
changed ncdump C test to build but not run (again) under CMake build
2017-11-25 17:57:13 +08:00
build_bin_test_no_prefix(tst_fillbug)
working on cmake build
2017-11-17 08:54:30 +08:00
add_sh_test(ncdump_sh tst_fillbug)
Added tst_netcdf4, tst_h_rdc0 to CMake build system.
2015-04-21 03:18:24 +08:00
Working out issues on Windows.
2017-12-13 00:44:22 +08:00
add_sh_test(ncdump tst_netcdf4_4)
Added fenceposts around bash scripts, excluding the bash.exe included with Windows 10 (for now) when searching to see if bash is available.
2018-04-27 04:38:56 +08:00
IF(MSVC AND HAVE_BASH)
Working out issues on Windows.
2017-12-13 00:44:22 +08:00
SET_TESTS_PROPERTIES(ncdump_tst_netcdf4_4 PROPERTIES WILL_FAIL TRUE)
Added fenceposts around bash scripts, excluding the bash.exe included with Windows 10 (for now) when searching to see if bash is available.
2018-04-27 04:38:56 +08:00
ENDIF(MSVC AND HAVE_BASH)
Added tst_bug324 to CMake-based builds, but it is failing for some reason. Will investigate shortly.
2015-02-05 05:11:20 +08:00
Moving some tests around so that 'make check' works properly, in support of https://github.com/Unidata/netcdf-c/issues/339
2017-05-25 04:25:22 +08:00
###
# Some test reordering was required to ensure these tests
# only ran after ncdump was built.
###
add_sh_test(ncdump run_ncgen_tests)
IF(USE_NETCDF4)
add_sh_test(ncdump run_ncgen_nc4_tests)
Working out issues on Windows.
2017-12-13 00:44:22 +08:00
ENDIF(USE_NETCDF4)
Ensuring run_back_comp_tests.sh only runs if netcdf4 is enabled.
2016-04-29 04:41:42 +08:00
Updating cmake shared_linker_flags as suggested by Nico Schlomer: https://github.com/Unidata/netcdf-c/issues/46 Fixed indentation. Updated .gitignore. Added a macro to make it easy to check to see if the linker supports a particular flag. Debug builds now pass the -w1,--no-undefined if it is detected the linker supports it.
2014-04-03 04:26:42 +08:00
add_sh_test(ncdump tst_grp_spec)
add_sh_test(ncdump tst_mud)
add_sh_test(ncdump_shell tst_h_scalar)
Working out issues on Windows.
2017-12-13 00:44:22 +08:00
More reshuffling.
2017-12-02 06:04:13 +08:00
add_sh_test(ncdump tst_nccopy4)
netcdf-c: Make cmake pass a windows cmd prompt add_sh_test only creates the test if HAVE_BASH is TRUE. Therefore we can only call SET_TESTS_PROPERTIES on the created test if HAVE_BASH is equally true.
2018-04-26 18:36:26 +08:00
IF(HAVE_BASH)
SET_TESTS_PROPERTIES(ncdump_tst_nccopy4 PROPERTIES RUN_SERIAL TRUE)
ENDIF(HAVE_BASH)
Added tst_bug324 to CMake-based builds, but it is failing for some reason. Will investigate shortly.
2015-02-05 05:11:20 +08:00
This PR primarily addresses Issue https://github.com/Unidata/netcdf-c/issues/725. After a long discussion, I implemented the rules at the end of that issue. They are documented in nccopy.1. Additionally, I added a new, per-variable, -c flag that allows for the direct setting of the chunking parameters for a variable. The form is -c var:c1,c2,...ck where var is the name of the variable (possibly a fully qualified name) and the ci are the chunksizes for that variable. It must be the case that the rank of the variable is k. If the new form is used as well as the old form, then the new form overrides the old form for the specified variable. Note that multiple occurrences of the new form -c flag may be specified. Misc. Other fixes 1. Added -M <size> option to nccopy to specify the minimum allowable chunksize. 2. Removed the unused variables from bigmeta.c (Issue https://github.com/Unidata/netcdf-c/issues/1079) 3. Fixed failure of nc_test4/tst_filter.sh by using the new -M flag (#1) to allow filter test on a small chunk size.
2018-07-27 10:16:02 +08:00
add_sh_test(ncdump tst_nccopy5)
IF(HAVE_BASH)
SET_TESTS_PROPERTIES(ncdump_tst_nccopy5 PROPERTIES RUN_SERIAL TRUE)
ENDIF(HAVE_BASH)
Working out issues on Windows.
2017-12-13 00:44:22 +08:00
IF(USE_NETCDF4)
add_sh_test(ncdump tst_ncgen4)
ENDIF(USE_NETCDF4)
Additional changes in support of CMake, CTest
2012-08-10 06:54:19 +08:00
ckp
2015-11-20 04:44:07 +08:00
add_sh_test(ncdump tst_inttags)
IF(USE_NETCDF4)
add_sh_test(ncdump tst_inttags4)
Working out issues on Windows.
2017-12-13 00:44:22 +08:00
ENDIF(USE_NETCDF4)
ckp
2015-11-20 04:44:07 +08:00
Fix ncgen handling of octal constants (with leading 0). re: https://github.com/Unidata/netcdf-c/issues/1330 The ncgen utility is documented to accept octal integer constants if the leading digit is zero. This was not implemented. Fix ncgen.l to properly handle such constants. Also add a test to c0.cdl.
2019-02-26 11:57:23 +08:00
add_sh_test(ncdump test_radix)
Add test cases
2019-11-04 03:03:13 +08:00
add_sh_test(ncdump tst_ctests)
This PR adds EXPERIMENTAL support for accessing data in the cloud using a variant of the Zarr protocol and storage format. This enhancement is generically referred to as "NCZarr". The data model supported by NCZarr is netcdf-4 minus the user-defined types and the String type. In this sense it is similar to the CDF-5 data model. More detailed information about enabling and using NCZarr is described in the document NUG/nczarr.md and in a [Unidata Developer's blog entry](https://www.unidata.ucar.edu/blogs/developer/en/entry/overview-of-zarr-support-in). WARNING: this code has had limited testing, so do use this version for production work. Also, performance improvements are ongoing. Note especially the following platform matrix of successful tests: Platform | Build System | S3 support ------------------------------------ Linux+gcc | Automake | yes Linux+gcc | CMake | yes Visual Studio | CMake | no Additionally, and as a consequence of the addition of NCZarr, major changes have been made to the Filter API. NOTE: NCZarr does not yet support filters, but these changes are enablers for that support in the future. Note that it is possible (probable?) that there will be some accidental reversions if the changes here did not correctly mimic the existing filter testing. In any case, previously filter ids and parameters were of type unsigned int. In order to support the more general zarr filter model, this was all converted to char*. The old HDF5-specific, unsigned int operations are still supported but they are wrappers around the new, char* based nc_filterx_XXX functions. This entailed at least the following changes: 1. Added the files libdispatch/dfilterx.c and include/ncfilter.h 2. Some filterx utilities have been moved to libdispatch/daux.c 3. A new entry, "filter_actions" was added to the NCDispatch table and the version bumped. 4. An overly complex set of structs was created to support funnelling all of the filterx operations thru a single dispatch "filter_actions" entry. 5. Move common code to from libhdf5 to libsrc4 so that it is accessible to nczarr. Changes directly related to Zarr: 1. Modified CMakeList.txt and configure.ac to support both C and C++ -- this is in support of S3 support via the awd-sdk libraries. 2. Define a size64_t type to support nczarr. 3. More reworking of libdispatch/dinfermodel.c to support zarr and to regularize the structure of the fragments section of a URL. Changes not directly related to Zarr: 1. Make client-side filter registration be conditional, with default off. 2. Hack include/nc4internal.h to make some flags added by Ed be unique: e.g. NC_CREAT, NC_INDEF, etc. 3. cleanup include/nchttp.h and libdispatch/dhttp.c. 4. Misc. changes to support compiling under Visual Studio including: * Better testing under windows for dirent.h and opendir and closedir. 5. Misc. changes to the oc2 code to support various libcurl CURLOPT flags and to centralize error reporting. 6. By default, suppress the vlen tests that have unfixed memory leaks; add option to enable them. 7. Make part of the nc_test/test_byterange.sh test be contingent on remotetest.unidata.ucar.edu being accessible. Changes Left TO-DO: 1. fix provenance code, it is too HDF5 specific.
2020-06-29 08:02:47 +08:00
IF(ENABLE_UNFIXED_MEMORY_LEAKS)
SET_TESTS_PROPERTIES(ncdump_run_ncgen_nc4_tests.sh ncdump_tst_nccopy4.sh ncdump_tst_ncgen_shared.sh ncdump_tst_netcdf4.sh
PROPERTIES ENVIRONMENT NC_VLEN_NOTEST=1)
ENDIF()
Working out issues on Windows.
2017-12-13 00:44:22 +08:00
ENDIF()
Additional changes in support of CMake, CTest
2012-08-10 06:54:19 +08:00
Going back and adding additional tests to CMake config files.
2012-08-08 06:58:15 +08:00
ENDIF()
Fix undefined references when using Visual Studio Fix Issue https://github.com/Unidata/netcdf-c/issues/1725. Replace PR https://github.com/Unidata/netcdf-c/pull/1726 Also replace PR https://github.com/Unidata/netcdf-c/pull/1694 The general problem is that under Visual Studio, we are seeing a number of undefined reference and other scoping errors. The reason is that the code is not properly using Visual Studio _declspec() declarations. The basic solution is to ensure that when compiling the code itself one needs to ensure that _declspec(dllexport) is used. There are several sets of macros to handle this, but they all rely on the flag DLL_EXPORT being define when the code is compiled, but not being defined when the code is used via a .h file. As a test, I modified XGetOpt.c to build properly. I also fixed the oc2 library to properly _declspec things like ocdebug. I also made some misc. changes to get all the tests to run if cygwin is installed (to get bash, sed, etc). Misc. Changes: * Put XGetOpt.c into libsrc and copy at build time to the other directories where it is needed.
2020-05-19 09:36:28 +08:00
#IF(MSVC)
# SET_TARGET_PROPERTIES(ncdump
# PROPERTIES LINK_FLAGS_DEBUG " /NODEFAULTLIB:MSVCRT"
# )
# SET_TARGET_PROPERTIES(nccopy
# PROPERTIES LINK_FLAGS_DEBUG " /NODEFAULTLIB:MSVCRT"
# )
# SET_TARGET_PROPERTIES(ncvalidator
# PROPERTIES LINK_FLAGS_DEBUG " /NODEFAULTLIB:MSVCRT"
# )
# IF(ENABLE_DAP)
# SET_TARGET_PROPERTIES(ocprint
# PROPERTIES LINK_FLAGS_DEBUG " /NODEFAULTLIB:MSVCRT"
# )
# ENDIF(ENABLE_DAP)
#ENDIF()
2012-09-20 05:32:28 +08:00
Updating CMakeLists.txt to address RPATH problem on OSX.
2013-08-23 01:15:12 +08:00
INSTALL(TARGETS ncdump RUNTIME DESTINATION bin COMPONENT utilities)
INSTALL(TARGETS nccopy RUNTIME DESTINATION bin COMPONENT utilities)
Fence-posted ocprint behind a DAP conditional, in support of https://github.com/Unidata/netcdf-c/commit/bf6ae6c59153dd2d36dbdf7793e29f824a98a20d#commitcomment-29912584
2018-08-02 04:15:01 +08:00
Added man pages to 'make install'
2012-10-18 05:14:30 +08:00
SET(MAN_FILES nccopy.1 ncdump.1)
Added initial 'make dist', 'make distcheck' support to CMake-based builds.
2013-06-04 00:42:04 +08:00
Misc. source comment typos Some are user-facing. Found via `codespell` and through the downstream FreeCAD.
2018-03-16 22:38:40 +08:00
# Note, the L512.bin file is file containing exactly 512 bytes each of value 0.
re e-support UBS-599337 re pull request https://github.com/Unidata/netcdf-c/pull/405 re pull request https://github.com/Unidata/netcdf-c/pull/446 Notes: 1. This branch is a cleanup of the magic.dmh branch. 2. magic.dmh was originally merged, but caused problems with parallel IO. It was re-issued as pull request https://github.com/Unidata/netcdf-c/pull/446. 3. This branch + pull request replace any previous pull requests and magic.dmh branch. Given an otherwise valid netCDF file that has a corrupted header, the netcdf library currently crashes. Instead, it should return NC_ENOTNC. Additionally, the NC_check_file_type code does not do the forward search required by hdf5 files. It currently only looks at file position 0 instead of 512, 1024, 2048,... Also, it turns out that the HDF4 magic number is assumed to always be at the beginning of the file (unlike HDF5). The change is localized to libdispatch/dfile.c See https://support.hdfgroup.org/release4/doc/DSpec_html/DS.pdf Also, it turns out that the code in NC_check_file_type is duplicated (mostly) in the function libsrc4/nc4file.c#nc_check_for_hdf. This branch does the following. 1. Make NC_check_file_type return NC_ENOTNC instead of crashing. 2. Remove nc_check_for_hdf and centralize all file format checking NC_check_file_type. 3. Add proper forward search for HDF5 files (but not HDF4 files) to look for the magic number at offsets of 0, 512, 1024... 4. Add test tst_hdf5_offset.sh. This tests that hdf5 files with an offset are properly recognized. It does so by prefixing a legal file with some number of zero bytes: 512, 1024, etc. 5. Off-topic: Added -N flag to ncdump to force a specific output dataset name.
2017-10-25 06:25:09 +08:00
# It is used for creating hdf5 files with varying offsets for testing.
Added initial 'make dist', 'make distcheck' support to CMake-based builds.
2013-06-04 00:42:04 +08:00
Add test cases
2019-11-04 03:03:13 +08:00
FILE(GLOB COPY_FILES ${CMAKE_BINARY_DIR}/ncgen/*.nc ${CMAKE_BINARY_DIR}/nc_test4/*.nc ${CMAKE_CURRENT_SOURCE_DIR}/*.ncml ${CMAKE_CURRENT_SOURCE_DIR}/*.nc ${CMAKE_CURRENT_SOURCE_DIR}/*.cdl ${CMAKE_CURRENT_SOURCE_DIR}/*.sh ${CMAKE_CURRENT_SOURCE_DIR}/*.1 ${CMAKE_CURRENT_SOURCE_DIR}/L512.bin ${CMAKE_CURRENT_SOURCE_DIR}/ref_ctest*.c)
Added initial 'make dist', 'make distcheck' support to CMake-based builds.
2013-06-04 00:42:04 +08:00
FILE(COPY ${COPY_FILES} DESTINATION ${CMAKE_CURRENT_BINARY_DIR}/ FILE_PERMISSIONS OWNER_WRITE OWNER_READ OWNER_EXECUTE)
Forgot to update cmake wrt to directory name changes
2014-09-20 02:43:39 +08:00
ADD_SUBDIRECTORY(cdl)
ADD_SUBDIRECTORY(expected)
Added initial 'make dist', 'make distcheck' support to CMake-based builds.
2013-06-04 00:42:04 +08:00
2012-08-28 05:49:09 +08:00
SET_DIRECTORY_PROPERTIES(PROPERTIES ADDITIONAL_MAKE_CLEAN_FILES "${CLEANFILES}")
Added tst_bug324 to CMake-based builds, but it is failing for some reason. Will investigate shortly.
2015-02-05 05:11:20 +08:00
IF(NOT MSVC)
Updating cmake shared_linker_flags as suggested by Nico Schlomer: https://github.com/Unidata/netcdf-c/issues/46 Fixed indentation. Updated .gitignore. Added a macro to make it easy to check to see if the linker supports a particular flag. Debug builds now pass the -w1,--no-undefined if it is detected the linker supports it.
2014-04-03 04:26:42 +08:00
INSTALL(FILES ${MAN_FILES} DESTINATION "share/man/man1" COMPONENT documentation)
Added initial 'make dist', 'make distcheck' support to CMake-based builds.
2013-06-04 00:42:04 +08:00
ENDIF()
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