netcdf-c/CMakeLists.txt

## This is a CMake file, part of Unidata's netCDF package.
# Copyright 2012-2013, see the COPYRIGHT file for more information.

##################################
# Set Project Properties
##################################

#Minimum required CMake Version
cmake_minimum_required(VERSION 2.8.8)

#Project Name
project(netCDF C)
set(PACKAGE "netCDF" CACHE STRING "")
#####
# Version Info:
#
# Release Version
# Library Version
# SO Version
#
# SO Version is computed from library version. See:
# http://www.gnu.org/software/libtool/manual/libtool.html#Libtool-versioning
#####

SET(netCDF_VERSION_MAJOR 4)
SET(netCDF_VERSION_MINOR 3)
SET(netCDF_VERSION_PATCH 3)
SET(netCDF_VERSION_NOTE "-rc1")
SET(netCDF_VERSION ${netCDF_VERSION_MAJOR}.${netCDF_VERSION_MINOR}.${netCDF_VERSION_PATCH}${netCDF_VERSION_NOTE})
SET(VERSION ${netCDF_VERSION})
SET(netCDF_LIB_VERSION 7.2.0)
SET(netCDF_SO_VERSION 7)
SET(PACKAGE_VERSION ${VERSION})

# Get system configuration, Use it to determine osname, os release, cpu. These
# will be used when committing to CDash.
find_program(UNAME NAMES uname)
IF(UNAME)
  macro(getuname name flag)
    exec_program("${UNAME}" ARGS "${flag}" OUTPUT_VARIABLE "${name}")
  endmacro(getuname)
  getuname(osname -s)
  getuname(osrel  -r)
  getuname(cpu    -m)
  set(BUILDNAME "${osname}-${osrel}-${cpu}" CACHE STRING "Build name variable for CDash")
ENDIF()

# Determine if DOXYGEN and DOT are available.  These will be used
# when building the documentation.
#FIND_PROGRAM(NC_DOXYGEN NAMES doxygen)
FIND_PACKAGE(Doxygen)
FIND_PROGRAM(NC_DOT NAMES dot)

# For CMAKE_INSTALL_LIBDIR
INCLUDE(GNUInstallDirs)

IF(MSVC)
  SET(GLOBAL PROPERTY USE_FOLDERS ON)
ENDIF()

#Add custom CMake Module
SET(CMAKE_MODULE_PATH "${CMAKE_SOURCE_DIR}/cmake/modules/"
  CACHE INTERNAL "Location of our custom CMake modules.")

# auto-configure style checks, other CMake modules.
INCLUDE(${CMAKE_ROOT}/Modules/CheckLibraryExists.cmake)
INCLUDE(${CMAKE_ROOT}/Modules/CheckIncludeFile.cmake)
INCLUDE(${CMAKE_ROOT}/Modules/CheckTypeSize.cmake)
INCLUDE(${CMAKE_ROOT}/Modules/CheckFunctionExists.cmake)
INCLUDE(${CMAKE_ROOT}/Modules/CheckCXXSourceCompiles.cmake)
INCLUDE(${CMAKE_ROOT}/Modules/CheckCSourceCompiles.cmake)
INCLUDE(${CMAKE_ROOT}/Modules/TestBigEndian.cmake)
INCLUDE(${CMAKE_ROOT}/Modules/CheckSymbolExists.cmake)
INCLUDE(${CMAKE_ROOT}/Modules/GetPrerequisites.cmake)

INCLUDE(CheckCCompilerFlag)
FIND_PACKAGE(PkgConfig QUIET)

# A macro to check if a C linker supports a particular flag.
MACRO(CHECK_C_LINKER_FLAG M_FLAG M_RESULT)
  SET(T_REQ_FLAG "${CMAKE_REQUIRED_FLAGS}")
  SET(CMAKE_REQUIRED_FLAGS "${M_FLAG}")
  CHECK_C_SOURCE_COMPILES("int main() {return 0;}" ${M_RESULT})
  SET(CMAKE_REQUIRED_FLAGS "${T_REQ_FLAG}")
ENDMACRO()

# Enable 'dist and distcheck'.
# File adapted from http://ensc.de/cmake/FindMakeDist.cmake
FIND_PACKAGE(MakeDist)
# End 'enable dist and distcheck'

# Set the build type.
IF(NOT CMAKE_BUILD_TYPE)
  SET(CMAKE_BUILD_TYPE DEBUG CACHE STRING "Choose the type of build, options are: None, Debug, Release."
    FORCE)
ENDIF()

# Set build type uppercase
STRING(TOUPPER ${CMAKE_BUILD_TYPE} CMAKE_BUILD_TYPE)

################################
# End Project Properties
################################


################################
# Set CTest Properties
################################

ENABLE_TESTING()
INCLUDE(CTest)

# Copy the CTest customization file into binary directory, as required.
FILE(COPY ${CMAKE_SOURCE_DIR}/CTestCustom.cmake DESTINATION ${CMAKE_BINARY_DIR})

# Set Memory test program for non-MSVC based builds.
# Assume valgrind for now.
IF(NOT MSVC)
  SET(CTEST_MEMORYCHECK_COMMAND valgrind CACHE STRING "")
ENDIF()

# Set variable to define the build type.
INCLUDE(GenerateExportHeader)

################################
# End CTest Properties
################################


################################
# Compiler Configuration
################################

# Default building shared libraries.
OPTION(BUILD_SHARED_LIBS "Configure netCDF as a shared library." ON)
SET(LIB_TYPE STATIC)
IF(BUILD_SHARED_LIBS)
  SET(LIB_TYPE SHARED)
  IF(CMAKE_COMPILER_IS_GNUCC OR APPLE)
    SET(CMAKE_C_FLAGS "${CMAKE_C_FLAGS} -fPIC")
    SET(CMAKE_SHARED_LINKER_FLAGS "${CMAKE_SHARED_LINKER_FLAGS} -fPIC")
  ENDIF()
ENDIF()

# Set some default linux gcc & apple compiler options for
# debug builds.
IF(CMAKE_COMPILER_IS_GNUCC OR APPLE)
  OPTION(ENABLE_COVERAGE_TESTS "Enable compiler flags needed to perform coverage tests." OFF)
  OPTION(ENABLE_CONVERSION_WARNINGS "Enable warnings for implicit conversion from 64 to 32-bit datatypes." ON)
  OPTION(ENABLE_USED_VAR_PAR_WARNINGS "Enable warnings for unused parameters and variables. Creates very noisy output." OFF)
  OPTION(ENABLE_LARGE_FILE_TESTS "Enable large file tests." OFF)

  # Debugging flags
  SET(CMAKE_C_FLAGS_DEBUG "${CMAKE_C_FLAGS_DEBUG} -Wall")

  # Check to see if -Wl,--no-undefined is supported.
  CHECK_C_LINKER_FLAG("-Wl,--no-undefined" LIBTOOL_HAS_NO_UNDEFINED)

  IF(LIBTOOL_HAS_NO_UNDEFINED)
    SET(CMAKE_SHARED_LINKER_FLAGS_DEBUG "${CMAKE_SHARED_LINKER_FLAGS_DEBUG} -Wl,--no-undefined")
  ENDIF()
  SET(CMAKE_REQUIRED_FLAGS "${TMP_CMAKE_REQUIRED_FLAGS}")

  # Coverage tests need to have optimization turned off.
  IF(ENABLE_COVERAGE_TESTS)
    SET(CMAKE_C_FLAGS "${CMAKE_C_FLAGS} -g -O0 -fprofile-arcs -ftest-coverage")
    SET(CMAKE_EXE_LINKER_FLAGS "${CMAKE_EXE_LINKER_FLAGS} -fprofile-arcs -ftest-coverage")
    MESSAGE(STATUS "Coverage Tests: On.")
  ENDIF()

  SET(CMAKE_C_FLAGS_DEBUG "${CMAKE_C_FLAGS_DEBUG} -O2")

  # Unused var and parameter warnings create a lot of noise.
  IF(NOT ENABLE_UNUSED_VAR_PAR_WARNINGS)
    SET(CMAKE_C_FLAGS "${CMAKE_C_FLAGS} -Wno-unused-variable -Wno-unused-parameter")
  ENDIF()

  # Warnings for 64-to-32 bit conversions.
  IF(ENABLE_CONVERSION_WARNINGS)
    CHECK_C_COMPILER_FLAG(-Wconversion CC_HAS_WCONVERSION)
    CHECK_C_COMPILER_FLAG(-Wshorten-64-to-32 CC_HAS_SHORTEN_64_32)

    IF(CC_HAS_SHORTEN_64_32)
      SET(CMAKE_C_FLAGS_DEBUG "${CMAKE_C_FLAGS_DEBUG} -Wshorten-64-to-32")
    ENDIF()
    IF(CC_HAS_WCONVERSION)
      SET(CMAKE_C_FLAGS_DEBUG "${CMAKE_C_FLAGS_DEBUG} -Wconversion")
    ENDIF()

  ENDIF(ENABLE_CONVERSION_WARNINGS)

ENDIF(CMAKE_COMPILER_IS_GNUCC OR APPLE)

# End default linux gcc & apple compiler options.

ADD_DEFINITIONS()

# Supress CRT Warnings.
# Only necessary for Windows
IF(MSVC)
  ADD_DEFINITIONS(-D_CRT_SECURE_NO_WARNINGS)
ENDIF()

################################
# End Compiler Configuration
################################


################################
# Define Utility Macros
################################

# Macro to append files to the EXTRA_DIST files.
SET(EXTRA_DIST "")
MACRO(ADD_EXTRA_DIST files)
  FOREACH(F ${files})
    SET(EXTRA_DIST ${EXTRA_DIST} ${CMAKE_CURRENT_SOURCE_DIR}/${F})
    SET(EXTRA_DIST ${EXTRA_DIST} PARENT_SCOPE)
  ENDFOREACH()
ENDMACRO()

# A basic script used to convert m4 files
FIND_PROGRAM(NC_M4 NAMES m4)
MACRO(GEN_m4 filename)
  IF(NOT EXISTS ${CMAKE_CURRENT_SOURCE_DIR}/${filename}.c)
    ADD_CUSTOM_COMMAND(
      OUTPUT ${CMAKE_CURRENT_SOURCE_DIR}/${filename}.c
      COMMAND ${NC_M4}
      ARGS ${CMAKE_CURRENT_SOURCE_DIR}/${filename}.m4 > ${CMAKE_CURRENT_SOURCE_DIR}/${filename}.c
      VERBATIM
      )
  ENDIF()
ENDMACRO(GEN_m4)

# Binary tests, but ones which depend on value of 'TEMP_LARGE' being defined.
MACRO(add_bin_env_temp_large_test prefix F)
  ADD_EXECUTABLE(${prefix}_${F} ${F}.c)
  TARGET_LINK_LIBRARIES(${prefix}_${F} netcdf)
  IF(MSVC)
    SET_TARGET_PROPERTIES(${prefix}_${F}
      PROPERTIES LINK_FLAGS_DEBUG " /NODEFAULTLIB:MSVCRT"
      )
  ENDIF()

  ADD_TEST(${prefix}_${F} bash "-c" "TEMP_LARGE=${CMAKE_SOURCE_DIR} ${CMAKE_CURRENT_BINARY_DIR}/${prefix}_${F}")
  IF(MSVC)
    SET_PROPERTY(TARGET ${prefix}_${F} PROPERTY FOLDER "tests")
  ENDIF()
ENDMACRO()


# Tests which are binary, but depend on a particular environmental variable.
MACRO(add_bin_env_test prefix F)
  ADD_EXECUTABLE(${prefix}_${F} ${F}.c)
  TARGET_LINK_LIBRARIES(${prefix}_${F} netcdf)
  IF(MSVC)
    SET_TARGET_PROPERTIES(${prefix}_${F}
      PROPERTIES LINK_FLAGS_DEBUG " /NODEFAULTLIB:MSVCRT"
      )
  ENDIF()

  ADD_TEST(${prefix}_${F} bash "-c" "TOPSRCDIR=${CMAKE_SOURCE_DIR} ${CMAKE_CURRENT_BINARY_DIR}/${prefix}_${F}")
  IF(MSVC)
    SET_PROPERTY(TARGET ${prefix}_${F} PROPERTY FOLDER "tests")
  ENDIF()
ENDMACRO()

# Build a binary used by a script, but don't make a test out of it.
MACRO(build_bin_test F)
  ADD_EXECUTABLE(${F} ${F}.c)
  TARGET_LINK_LIBRARIES(${F} netcdf)
  IF(MSVC)
    SET_TARGET_PROPERTIES(${F}
      PROPERTIES LINK_FLAGS_DEBUG " /NODEFAULTLIB:MSVCRT"
      )
  ENDIF()
ENDMACRO()

# Binary tests which are used by a script looking for a specific name.
MACRO(add_bin_test_no_prefix F)
  build_bin_test(${F})
  ADD_TEST(${F} ${EXECUTABLE_OUTPUT_PATH}/${F})
  IF(MSVC)
    SET_PROPERTY(TEST ${F} PROPERTY FOLDER "tests/")
  ENDIF()
ENDMACRO()

# Binary tests which are used by a script looking for a specific name.
MACRO(build_bin_test_no_prefix F)
  build_bin_test(${F})
  ADD_TEST(${F} ${EXECUTABLE_OUTPUT_PATH}/${F})
  IF(MSVC)
    SET_PROPERTY(TEST ${F} PROPERTY FOLDER "tests/")
  ENDIF()
ENDMACRO()

MACRO(add_bin_test prefix F)
  ADD_EXECUTABLE(${prefix}_${F} ${F}.c)
  TARGET_LINK_LIBRARIES(${prefix}_${F} netcdf)
  IF(MSVC)
    SET_TARGET_PROPERTIES(${prefix}_${F}
      PROPERTIES LINK_FLAGS_DEBUG " /NODEFAULTLIB:MSVCRT"
      )
  ENDIF()
  ADD_TEST(${prefix}_${F} ${EXECUTABLE_OUTPUT_PATH}/${prefix}_${F})
  IF(MSVC)
    SET_PROPERTY(TEST ${prefix}_${F} PROPERTY FOLDER "tests/")
  ENDIF()
ENDMACRO()

# A cmake script to print out information at the end of the configuration step.
MACRO(print_conf_summary)
  MESSAGE("")
  MESSAGE("")
  MESSAGE("Configuration Summary:")
  MESSAGE("")
  MESSAGE(STATUS "Building Shared Libraries:     ${BUILD_SHARED_LIBS}")
  MESSAGE(STATUS "Building netCDF-4:             ${ENABLE_NETCDF_4}")
  MESSAGE(STATUS "Building DAP Support:          ${ENABLE_DAP}")
  MESSAGE(STATUS "Building Utilities:            ${BUILD_UTILITIES}")
  IF(CMAKE_PREFIX_PATH)
    MESSAGE(STATUS "CMake Prefix Path:             ${CMAKE_PREFIX_PATH}")
  ENDIF()
  MESSAGE("")

  IF(${STATUS_PNETCDF} OR ${STATUS_PARALLEL})
    MESSAGE("Building Parallel NetCDF")
    MESSAGE(STATUS "Using pnetcdf:       ${STATUS_PNETCDF}")
    MESSAGE(STATUS "Using Parallel IO:   ${STATUS_PARALLEL}")
    MESSAGE("")
  ENDIF()

  MESSAGE("Tests Enabled:              ${ENABLE_TESTS}")
  IF(ENABLE_TESTS)
    MESSAGE(STATUS "DAP Remote Tests:  ${ENABLE_DAP_REMOTE_TESTS}")
    MESSAGE(STATUS "DAP AUTH Tests:    ${ENABLE_DAP_AUTH_TESTS}")
    MESSAGE(STATUS "Extra Tests:       ${ENABLE_EXTRA_TESTS}")
    MESSAGE(STATUS "Coverage Tests:    ${ENABLE_COVERAGE_TESTS}")
    MESSAGE(STATUS "Parallel Tests:    ${ENABLE_PARALLEL_TESTS}")
    MESSAGE(STATUS "Large File Tests:  ${ENABLE_LARGE_FILE_TESTS}")
  ENDIF()

  MESSAGE("")
  MESSAGE("Compiler:")
  MESSAGE("")
  MESSAGE(STATUS "Build Type:           ${CMAKE_BUILD_TYPE}")
  MESSAGE(STATUS "CMAKE_C_COMPILER:     ${CMAKE_C_COMPILER}")
  MESSAGE(STATUS "CMAKE_C_FLAGS:        ${CMAKE_C_FLAGS}")
  IF("${CMAKE_BUILD_TYPE}" STREQUAL "DEBUG")
    MESSAGE(STATUS "CMAKE_C_FLAGS_DEBUG:  ${CMAKE_C_FLAGS_DEBUG}")
  ENDIF()
  IF("${CMAKE_BUILD_TYPE}" STREQUAL "RELEASE")
    MESSAGE(STATUS "CMAKE_C_FLAGS_RELEASE:   ${CMAKE_C_FLAGS_RELEASE}")
  ENDIF()

  MESSAGE(STATUS "Linking against:      ${ALL_TLL_LIBS}")

  MESSAGE("")
ENDMACRO()

# Shell script Macro
MACRO(add_sh_test prefix F)
  IF(NOT MSVC)
    ADD_TEST(${prefix}_${F} bash "-c" "export srcdir=${CMAKE_CURRENT_SOURCE_DIR};export TOPSRCDIR=${CMAKE_SOURCE_DIR};${CMAKE_CURRENT_BINARY_DIR}/${F}.sh")
  ENDIF()
ENDMACRO()

# Macro for replacing '/MD' with '/MT'.
# Used only on Windows, /MD tells VS to use the shared
# CRT libs, MT tells VS to use the static CRT libs.
#
# Taken From:
#   http://www.cmake.org/Wiki/CMake_FAQ#How_can_I_build_my_MSVC_application_with_a_static_runtime.3F
#
MACRO(specify_static_crt_flag)
  SET(vars
    CMAKE_C_FLAGS
    CMAKE_C_FLAGS_DEBUG
    CMAKE_C_FLAGS_MINSIZEREL
    CMAKE_C_FLAGS_RELWITHDEBINFO
    CMAKE_CXX_FLAGS CMAKE_CXX_FLAGS_DEBUG
    CMAKE_CXX_FLAGS_RELEASE CMAKE_CXX_FLAGS_MINSIZEREL
    CMAKE_CXX_FLAGS_RELWITHDEBINFO)

  FOREACH(flag_var ${vars})
    IF(${flag_var} MATCHES "/MD")
      STRING(REGEX REPLACE "/MD" "/MT" ${flag_var} "${${flag_var}}")
    ENDIF()
  ENDFOREACH()

  FOREACH(flag_var ${vars})
    MESSAGE(STATUS " '${flag_var}': ${${flag_var}}")
  ENDFOREACH()
  MESSAGE(STATUS "")
ENDMACRO()

################################
# End Macro Definitions
################################


##
# Configuration for post-install RPath
# Adapted from http://www.cmake.org/Wiki/CMake_RPATH_handling
##
IF(NOT MSVC)
  # use, i.e. don't skip the full RPATH for the build tree
  SET(CMAKE_SKIP_BUILD_RPATH  FALSE)

  # when building, don't use the install RPATH already
  # (but later on when installing)
  SET(CMAKE_BUILD_WITH_INSTALL_RPATH FALSE)

  # Stanza for Apple RPATH.
  # See: http://www.cmake.org/pipermail/cmake/2011-April/043826.html
  #
  IF(APPLE)
    SET(CMAKE_INSTALL_NAME_DIR ${CMAKE_INSTALL_PREFIX}/${CMAKE_INSTALL_LIBDIR})
  ENDIF(APPLE)

  SET(CMAKE_INSTALL_RPATH "${CMAKE_INSTALL_PREFIX}/${CMAKE_INSTALL_LIBDIR}")

  # add the automatically determined parts of the RPATH
  # which point to directories outside the build tree to the install RPATH
  SET(CMAKE_INSTALL_RPATH_USE_LINK_PATH TRUE)

  # the RPATH to be used when installing, but only if it's not a system directory
  LIST(FIND CMAKE_PLATFORM_IMPLICIT_LINK_DIRECTORIES "${CMAKE_INSTALL_PREFIX}/${CMAKE_INSTALL_LIBDIR}" isSystemDir)
  IF("${isSystemDir}" STREQUAL "-1")
    SET(CMAKE_INSTALL_RPATH "${CMAKE_INSTALL_PREFIX}/${CMAKE_INSTALL_LIBDIR}")
  ENDIF("${isSystemDir}" STREQUAL "-1")
ENDIF()

##
# End configuration for post-install RPath
##

################################
# Option checks
################################

SET(CMAKE_INCLUDE_CURRENT_DIR ON)

# HDF5 cache variables.
SET(DEFAULT_CHUNK_SIZE 4194304 CACHE STRING "Default Chunk Cache Size.")
SET(DEFAULT_CHUNKS_IN_CACHE 10 CACHE STRING "Default number of chunks in cache.")
SET(CHUNK_CACHE_SIZE 4194304 CACHE STRING "Default Chunk Cache Size.")
SET(CHUNK_CACHE_NELEMS 1009 CACHE STRING "Default maximum number of elements in cache.")
SET(CHUNK_CACHE_PREEMPTION 0.75 CACHE STRING "Default file chunk cache preemption policy for HDf5 files(a number between 0 and 1, inclusive.")
SET(MAX_DEFAULT_CACHE_SIZE 67108864 CACHE STRING "Default maximum cache size.")
SET(NETCDF_LIB_NAME "" CACHE STRING "Default name of the netcdf library.")
SET(TEMP_LARGE "." CACHE STRING "Where to put large temp files if large file tests are run.")

IF(NOT NETCDF_LIB_NAME STREQUAL "")
  SET(MOD_NETCDF_NAME ON)
ENDIF()

# Set the appropriate compiler/architecture for universal OSX binaries.
IF(${CMAKE_SYSTEM_NAME} EQUAL "Darwin")
  SET(CMAKE_OSX_ARCHITECTURES i386;x86_64)
ENDIF(${CMAKE_SYSTEM_NAME} EQUAL "Darwin")

# Option to use Static Runtimes in MSVC
IF(MSVC)
  OPTION(NC_USE_STATIC_CRT "Use static CRT Libraries ('\\MT')." OFF)
  IF(NC_USE_STATIC_CRT)
    SET(USE_STATIC_CRT ON)
    specify_static_crt_flag()
  ENDIF()
ENDIF()

# Option to build netCDF Version 2
OPTION (ENABLE_V2_API "Build netCDF Version 2." ON)
SET(BUILD_V2 ${ENABLE_V2_API})
IF(NOT ENABLE_V2_API)
  SET(NO_NETCDF_2 ON)
ENDIF()

# Option to build utilities
OPTION(BUILD_UTILITIES "Build ncgen, ncgen3, ncdump." ON)

# Option to use MMAP
OPTION(ENABLE_MMAP "Use MMAP." OFF)
IF(ENABLE_MMAP)
  IF(NOT HAVE_MREMAP)
    MESSAGE(STATUS "mremap not found: disabling MMAP support.")
    SET(ENABLE_MMAP OFF)
  ELSE()
    SET(HAVE_MMAP ON)
    SET(BUILD_MMAP ON)
    SET(USE_MMAP ON)
  ENDIF()
ENDIF()

# Option to use examples.
OPTION(ENABLE_EXAMPLES "Build Examples" ON)

# Option to use Diskless
OPTION(ENABLE_DISKLESS "Build Diskless." ON)
IF(ENABLE_DISKLESS)
  SET(BUILD_DISKLESS ON)
  SET(USE_DISKLESS ON)
ENDIF()

# Option Logging, only valid for netcdf4.
OPTION(ENABLE_LOGGING "Enable Logging." OFF)
IF(ENABLE_LOGGING)
  SET(LOGGING ON)
ENDIF()
# Option to use HDF4
OPTION(ENABLE_HDF4 "Build netCDF-4 with HDF5 read capability(HDF4, HDF5 and Zlib required)." OFF)
IF(ENABLE_HDF4)
  SET(USE_HDF4 ON)
  # Check for include files, libraries.

  FIND_PATH(MFHDF_H_INCLUDE_DIR mfhdf.h)
  IF(NOT MFHDF_H_INCLUDE_DIR)
    MESSAGE(FATAL_ERROR "HDF4 Support specified, cannot find file mfhdf.h")
  ELSE()
    SET(HAVE_MFHDF_H ON CACHE BOOL "")
    INCLUDE_DIRECTORIES(${MFHDF_H_INCLUDE_DIR})
  ENDIF()

  FIND_LIBRARY(HDF4_DF_LIB NAMES df libdf hdf)
  IF(NOT HDF4_DF_LIB)
    MESSAGE(FATAL_ERROR "Can't find or link to the hdf4 df library.")
  ENDIF()

  FIND_LIBRARY(HDF4_MFHDF_LIB NAMES mfhdf libmfhdf)
  IF(NOT HDF4_MFHDF_LIB)
    MESSAGE(FATAL_ERROR "Can't find or link to the hdf4 mfhdf library.")
  ENDIF()

  SET(HDF4_LIBRARIES ${HDF4_MFHDF_LIB} ${HDF4_DF_LIB})
  # End include files, libraries.
  MESSAGE(STATUS "HDF4 libraries: ${HDF4_DF_LIB}, ${HDF4_MFHDF_LIB}")

  MESSAGE(STATUS "Seeking HDF4 jpeg dependency.")

  # Look for the jpeglib.h header file.
  FIND_PATH(JPEGLIB_H_INCLUDE_DIR jpeglib.h)
  IF(NOT JPEGLIB_H_INCLUDE_DIR)
    MESSAGE(FATAL_ERROR "HDF4 Support enabled but cannot find jpeglib.h")
  ELSE()
    SET(HAVE_JPEGLIB_H ON CACHE BOOL "")
    INCLUDE_DIRECTORIES(${JPEGLIB_H_INCLUDE_DIR})
  ENDIF()

  FIND_LIBRARY(JPEG_LIB NAMES jpeg libjpeg)
  IF(NOT JPEG_LIB)
    MESSAGE(FATAL_ERROR "HDF4 Support enabled but cannot find libjpeg")
  ENDIF()
  SET(HDF4_LIBRARIES ${JPEG_LIB} ${HDF4_LIBRARIES})
  MESSAGE(STATUS "Found JPEG libraries: ${JPEG_LIB}")

  # Option to enable HDF4 file tests.
  OPTION(ENABLE_HDF4_FILE_TESTS "Run HDF4 file tests.  This fetches sample HDF4 files from the Unidata ftp site to test with(requires wget)." ON)
  IF(ENABLE_HDF4_FILE_TESTS)
    FIND_PROGRAM(PROG_WGET NAMES wget)
    IF(PROG_WGET)
      SET(USE_HDF4_FILE_TESTS ON)
    ELSE()
      MESSAGE(STATUS "Unable to locate 'wget'.  Disabling hdf4 file tests.")
      SET(USE_HDF4_FILE_TESTS OFF)
    ENDIF()
  ENDIF()
ENDIF()

# Option to Build DLL
IF(WIN32)
  OPTION(ENABLE_DLL "Build a Windows DLL." ${BUILD_SHARED_LIBS})
  IF(ENABLE_DLL)
    SET(BUILD_DLL ON CACHE BOOL "")
    ADD_DEFINITIONS(-DDLL_NETCDF)
    ADD_DEFINITIONS(-DDLL_EXPORT)
  ENDIF()
ENDIF()
# Did the user specify a default minimum blocksize for posixio?
SET(NCIO_MINBLOCKSIZE 256 CACHE STRING "Minimum I/O Blocksize for netCDF classic and 64-bit offset format files.")

# Build netCDF4
OPTION(ENABLE_NETCDF_4 "Enable netCDF-4" ON)
IF(ENABLE_NETCDF_4)
  SET(USE_NETCDF4 ON CACHE BOOL "")
  SET(ENABLE_NETCDF_4 ON CACHE BOOL "")
  SET(ENABLE_NETCDF4 ON CACHE BOOL "")
ENDIF()

# Option for building RPC
OPTION(ENABLE_RPC OFF "Enable RPC Client and Server.")
IF(ENABLE_RPC)
  SET(BUILD_RPC ON CACHE BOOL "")
ENDIF()

# Option to Enable HDF5
OPTION(USE_SZIP "Use SZip" OFF)
OPTION(USE_HDF5 "Use HDF5." ${ENABLE_NETCDF_4})

IF(USE_HDF5 OR ENABLE_NETCDF_4)
  SET(USE_HDF5 ON)
  SET(USE_NETCDF4 ON)
  # Accomodate developers who have hdf5 libraries and
  # headers on their system, but do not have a the hdf
  # .cmake files.  If this is the case, they should
  # specify HDF5_HL_LIB, HDF5_LIB, HDF5_INCLUDE_DIR manually.
  IF(HDF5_LIB AND HDF5_HL_LIB AND HDF5_INCLUDE_DIR)
    SET(HDF5_LIBRARIES ${HDF5_LIB} ${HDF5_HL_LIB})
    SET(HDF5_C_LIBRARY ${HDF5_LIB})
    SET(HDF5_HL_LIBRARY ${HDF5_HL_LIB})
    MESSAGE(STATUS "Using HDF5 Library: ${HDF5_LIB}")
    MESSAGE(STATUS "Using HDF5_HL LIbrary: ${HDF5_HL_LIB}")
  ELSE()
    IF(MSVC)
      FIND_PACKAGE(HDF5 COMPONENTS C HL NO_MODULE REQUIRED)
    ELSE()
      FIND_PACKAGE(HDF5 COMPONENTS C HL REQUIRED)
    ENDIF()
  ENDIF()
  
  IF(NOT MSVC)
    # Depending on the install, either HDF5_hdf_library or
    # HDF5_C_LIBRARY may be defined.  We must check for either.
    IF(HDF5_C_LIBRARY)
      SET(HDF5_hdf5_LIBRARY ${HDF5_C_LIBRARY})
    ENDIF()

    # Find out if HDF5 was built with parallel support.
    # Do that by checking for the targets H5Pget_fapl_mpiposx and
    # H5Pget_fapl_mpio in ${HDF5_LIB}.
    CHECK_LIBRARY_EXISTS(${HDF5_hdf5_LIBRARY} H5Pget_fapl_mpiposix "" HDF5_IS_PARALLEL_MPIPOSIX)
    CHECK_LIBRARY_EXISTS(${HDF5_hdf5_LIBRARY} H5Pget_fapl_mpio "" HDF5_IS_PARALLEL_MPIO)

    IF(HDF5_IS_PARALLEL_MPIPOSIX OR HDF5_IS_PARALLEL_MPIO)
      SET(HDF5_IS_PARALLEL ON)
    ENDIF()

    IF(HDF5_IS_PARALLEL_MPIO)
      SET(USE_PARALLEL_MPIO ON)
    ENDIF()

    IF(HDF5_IS_PARALLEL_MPIPOSIX)
      SET(USE_PARALLEL_POSIX ON)
    ENDIF()

    OPTION(ENABLE_DYNAMIC_LOADING "Enable Dynamic Loading" ON)
    IF(ENABLE_DYNAMIC_LOADING)
      SET(USE_LIBDL ON CACHE BOOL "")
    ENDIF()

  ENDIF(NOT MSVC)

  # Assert HDF5 version.
  SET(HDF5_VERSION_REQUIRED 1.8.6)
  execute_process(COMMAND sh -c "h5cc -showconfig | grep -i \"HDF5 version\" | sed 's/^.*[^0-9]\\([0-9]*\\.[0-9]*\\.[0-9]*\\).*$/\\1/'"
    OUTPUT_VARIABLE HDF5_VERSION
    ERROR_QUIET
    )

  # It cannot be assumed that libhdf5.settings exists.  If it doesn't,
  # the call to h5cc will have failed.  At this point we will have to
  # trust the user that they have configured their system properly.

  IF("${HDF5_VERSION}" STREQUAL "")
    MESSAGE(STATUS "Unable to determine hdf5 version.  NetCDF requires at least version ${HDF5_VERSION_REQUIRED}")
  ELSE()
    IF(${HDF5_VERSION} VERSION_LESS ${HDF5_VERSION_REQUIRED})
      MESSAGE(FATAL_ERROR
	"netCDF requires at least HDF5 ${HDF5_VERSION_REQUIRED}. Found ${HDF5_VERSION}.")
    ENDIF()
  ENDIF()

  INCLUDE_DIRECTORIES(${HDF5_INCLUDE_DIR})

  # Starting with hdf5 1.8.11, dynamic loading is an option.
  # In case hdf5 has a dependency on libdl, the user must specify
  # -DENABLE_DYNAMIC_LOADING=ON when configuring netcdf.
  IF(USE_LIBDL)
    FIND_LIBRARY(LIBDL NAMES dl dld)
    FIND_PATH(LIBDL_INCLUDE_DIR dlfcn.h)
    IF(NOT LIBDL)
      MESSAGE(ERROR "Cannot find libdl, but dynamic loading was specified.")
    ENDIF()
    IF(NOT LIBDL_INCLUDE_DIR)
      MESSAGE(ERROR "Cannot find dlfcn.h, but dynamic loading was specified.")
    ENDIF()
    MESSAGE(STATUS "Found libdl: ${LIBDL}")
    SET(HAVE_LIBDL ON)
    INCLUDE_DIRECTORIES(${LIBDL_INCLUDE_DIR})
  ENDIF()

  #Check to see if H5Z_SZIP exists in HDF5_Libraries. If so, we must use szip.
  IF(USE_SZIP)
    FIND_PACKAGE(SZIP NO_MODULE)
    INCLUDE_DIRECTORIES(${SZIP_INCLUDE_DIR})
  ENDIF()

  SET(H5_USE_16_API 1)
  OPTION(NC_ENABLE_HDF_16_API "Enable HDF5 1.6.x Compatibility(Required)" ON)
  IF(NOT NC_ENABLE_HDF_16_API)
    SET(H5_USE_16_API 0)
  ENDIF()

  # Check for ZLib, but only if using HDF5.
  FIND_PACKAGE(ZLIB)
  IF(NOT ZLIB_LIBRARY)
    MESSAGE(FATAL_ERROR "HDF5 Support specified, cannot find ZLib.")
  ENDIF()
  SET(USE_ZLIB ON)
  INCLUDE_DIRECTORIES(${ZLIB_INCLUDE_DIRS})
ENDIF()

# Option to Build DAP Client
OPTION(ENABLE_DAP "Enable DAP Client." ON)
IF(ENABLE_DAP)
  SET(USE_DAP ON)
  FIND_PACKAGE(CURL)
  IF(NOT CURL_LIBRARY)
    MESSAGE(FATAL_ERROR "DAP Support specified, CURL libraries are not found.")
  ENDIF()

  ADD_DEFINITIONS(-DCURL_STATICLIB=1)
  INCLUDE_DIRECTORIES(${CURL_INCLUDE_DIRS})

  # Check to see if CURLOPT_USERNAME is defined. It is present starting version 7.19.1
  CHECK_C_SOURCE_COMPILES("
  #include <curl/curl.h>
  int main() {int x = CURLOPT_USERNAME;}" HAVE_CURLOPT_USERNAME)

# Check to see if CURLOPT_PASSWORD is defined. It is present starting version 7.19.1
CHECK_C_SOURCE_COMPILES("
  #include <curl/curl.h>
  int main() {int x = CURLOPT_PASSWORD;}" HAVE_CURLOPT_PASSWORD)

# Check to see if CURLOPT_KEYPASSWD is defined. It is present starting version 7.16.4
CHECK_C_SOURCE_COMPILES("
  #include <curl/curl.h>
  int main() {int x = CURLOPT_KEYPASSWD;}" HAVE_CURLOPT_KEYPASSWD)

# Check to see if CURLINFO_RESPONSE_CODE is defined. It showed up in curl 7.10.7
CHECK_C_SOURCE_COMPILES("
  #include <curl/curl.h>
  int main() {int x = CURLINFO_RESPONSE_CODE;}" HAVE_CURLINFO_RESPONSE_CODE)
ENDIF()

# Check to see if libtool supports

# Check for the math library so it can be explicitely linked.
IF(NOT WIN32)
  FIND_LIBRARY(HAVE_LIBM NAMES math m libm)
  MESSAGE(STATUS "Found Math library: ${HAVE_LIBM}")
  IF(NOT HAVE_LIBM)
    MESSAGE(FATAL_ERROR "Unable to find the math library.")
  ENDIF()
ENDIF()

# Option to Enable DAP long tests, remote tests.
OPTION(ENABLE_DAP_LONG_TESTS "Enable DAP long tests." OFF)
OPTION(ENABLE_DAP_REMOTE_TESTS "Enable DAP remote tests." ON)

IF(ENABLE_DAP_REMOTE_TESTS)
  OPTION(ENABLE_DAP_AUTH_TESTS "Enable DAP remote authorization tests." OFF)
ENDIF()


# If netCDF4 and DAP, Option for DAP groups.
IF(ENABLE_NETCDF_4 AND USE_DAP)
  OPTION(ENABLE_DAP_GROUPS "Whether netcdf4 group names should be enabled." ON)
ELSE()
  SET(ENABLE_DAP_GROUPS OFF CACHE BOOL "Whether netcdf4 group names should be enabled.")
ENDIF()

# Enable some developer-only tests
OPTION(ENABLE_EXTRA_TESTS "Enable Extra tests. Some may not work because of known issues. Developers only." OFF)
IF(ENABLE_EXTRA_TESTS)
  SET(EXTRA_TESTS ON)
ENDIF()

# Option to use bundled XGetopt in place of getopt(). This is mostly useful
# for MSVC builds. If not building utilities, getopt() isn't required at all.
IF(MSVC)
  OPTION(ENABLE_XGETOPT "Enable bundled XGetOpt instead of external getopt()." ON)
  IF(ENABLE_XGETOPT)
    SET(USE_X_GETOPT ON CACHE BOOL "")
  ENDIF()
ENDIF()

SET(MATH "")
IF(NOT WIN32)
  # FFIO insteaad of PosixIO
  OPTION(ENABLE_FFIO "If true, use ffio instead of posixio" OFF)
  IF(ENABLE_FFIO)
    SET(USE_FFIO ON CACHE BOOL "")
  ENDIF()
ENDIF()

# Enable Tests
#IF(NOT MSVC)
OPTION(ENABLE_TESTS "Enable basic tests, run with 'make test'." ON)
IF(ENABLE_TESTS)
  SET(BUILD_TESTSETS ON CACHE BOOL "")

  # Options for CTest-based tests, dashboards.
  SET(NC_CTEST_PROJECT_NAME "netcdf-c" CACHE STRING "Project Name for CTest-based testing purposes.")
  SET(NC_CTEST_DROP_SITE "my.cdash.org" CACHE STRING "Dashboard location for CTest-based testing purposes.")
  SET(NC_CTEST_DROP_LOC_PREFIX "" CACHE STRING "Prefix for Dashboard location on remote server when using CTest-based testing.")

  # Create a CTestConfig file from the template.
  CONFIGURE_FILE("${netCDF_SOURCE_DIR}/CTestConfig.cmake.in"
    "${netCDF_SOURCE_DIR}/CTestConfig.cmake"
    @ONLY
    )

ENDIF()

# Enable Large file tests
IF(ENABLE_LARGE_FILE_TESTS)
  SET(LARGE_FILE_TESTS ON)
ENDIF()

# Location for large file tests.
SET(TEMP_LARGE "." CACHE STRING "Location to store large file tests.")

OPTION(ENABLE_FSYNC "Enable experimental fsync code." OFF)
IF(ENABLE_FSYNC)
  SET(USE_FSYNC ON)
ENDIF()

# Temporary 
OPTION (ENABLE_JNA "Enable jna bug fix code." OFF)
IF(ENABLE_JNA)
  SET(JNA ON)
ENDIF()

# Linux specific large file support flags.
# Modelled after check in CMakeLists.txt for hdf5.
OPTION(ENABLE_LARGE_FILE_SUPPORT "Enable large file support." ON)
IF(ENABLE_LARGE_FILE_SUPPORT)
  IF(MSVC)
    SET(CMAKE_EXE_LINKER_FLAGS "${CMAKE_EXE_LINKER_FLAGS} /LARGEADDRESSAWARE")
    SET(CMAKE_SHARED_LINKER_FLAGS "${CMAKE_SHARED_LINKER_FLAGS} /LARGEADDRESSAWARE")
    SET(CMAKE_MODULE_LINKER_FLAGS "${CMAKE_MODULE_LINKER_FLAGS} /LARGEADDRESSAWARE")
  ELSE()
    SET(_FILE_OFFSET_BITS 64)
    SET(_LARGEFILE64_SOURCE TRUE)
    SET(_LARGEFILE_SOURCE TRUE)
  ENDIF()
ENDIF()

OPTION(ENABLE_EXAMPLE_TESTS "Run extra example tests.  Requires GNU Sed. Ignored if netCDF-4 is not Enabled" OFF)
IF(NOT ENABLE_NETCDF_4 AND ENABLE_EXAMPLE_TESTS)
  SET(ENABLE_EXAMPLE_TESTS OFF)
ENDIF()

# Enable Parallel (different than pnetcdf).
SET(STATUS_PARALLEL "OFF")
OPTION(ENABLE_PARALLEL "Build netCDF-4 with parallel IO" "${HDF5_IS_PARALLEL}")
IF(ENABLE_PARALLEL AND ENABLE_NETCDF_4)
  IF(NOT HDF5_IS_PARALLEL)
    SET(USE_PARALLEL OFF CACHE BOOL "")
    MESSAGE(STATUS "Cannot find HDF5 library built with parallel support. Disabling parallel build.")
  ELSE()
    SET(USE_PARALLEL ON CACHE BOOL "")
    SET(STATUS_PARALLEL "ON")
  ENDIF()
ENDIF()

# Options to enable parallel IO, tests.
SET(STATUS_PNETCDF "OFF")
OPTION(ENABLE_PNETCDF "Build with parallel I/O for classic and 64-bit offset files using parallel-netcdf." OFF)
IF(ENABLE_PNETCDF)
  # Check for ncmpi_create in libpnetcdf, define USE_PNETCDF
  # Does the user want to turn on PNETCDF read ability?
  SET(USE_PNETCDF ON CACHE BOOL "")
  FIND_LIBRARY(PNETCDF NAMES pnetcdf)
  FIND_PATH(PNETCDF_INCLUDE_DIR pnetcdf.h)
  IF(NOT PNETCDF)
    MESSAGE(STATUS "Cannot find pNetCDF library. Disabling pNetCDF support.")
    SET(USE_PNETCDF OFF CACHE BOOL "")
  ENDIF()
  SET(STATUS_PNETCDF "ON")
  INCLUDE_DIRECTORIES(${PNETCDF_INCLUDE_DIR})
  SET(HAVE_LIBPNETCDF ON)
  # pnetcdf => parallel
  SET(STATUS_PARALLEL "ON")
ENDIF()

# Enable Parallel Tests.
OPTION(ENABLE_PARALLEL_TESTS "Enable Parallel IO Tests. Ignored if netCDF4 is not enabled, or if there is no parallel I/O Support." ${USE_PARALLEL})
IF(ENABLE_PARALLEL_TESTS AND USE_PARALLEL)
  SET(TEST_PARALLEL ON CACHE BOOL "")
ENDIF()

# Determine whether or not to generate documentation.
OPTION(ENABLE_DOXYGEN "Enable generation of doxygen." OFF)
IF(ENABLE_DOXYGEN)
  IF(DOXYGEN_FOUND)
    # Offer the option to build internal documentation.
    OPTION(ENABLE_INTERNAL_DOCS "Build internal documentation. This is of interest to developers only." OFF)
    IF(ENABLE_INTERNAL_DOCS)
      SET(BUILD_INTERNAL_DOCS YES CACHE STRING "")
    ELSE()
      SET(BUILD_INTERNAL_DOCS NO CACHE STRING "")
    ENDIF()
    
    # Option to turn on the TODO list in the doxygen-generated documentation.
    OPTION(ENABLE_DOXYGEN_TASKS "Turn on test, todo, bug lists in documentation. This is of interest to developers only." OFF)
    IF(ENABLE_DOXYGEN_TASKS)
      SET(SHOW_DOXYGEN_TAG_LIST YES CACHE STRING "")
    ELSE(ENABLE_DOXYGEN_TASKS)
      SET(SHOW_DOXYGEN_TODO_LIST NO CACHE STRING "")
    ENDIF(ENABLE_DOXYGEN_TASKS)

    # Specify whether or not 'dot' was found on the system path.
    IF(NC_DOT)
      SET(HAVE_DOT YES CACHE STRING "")
    ELSE(NC_DOT)
      SET(HAVE_DOT NO CACHE_STRING "")
    ENDIF(NC_DOT)

  ELSE(DOXYGEN_FOUND)
    MESSAGE(STATUS "Unable to build internal documentation.  Doxygen does not appear to be on your executable path. Install doxygen and configure the project again.")
    SET(ENABLE_DOXYGEN=OFF)
  ENDIF(DOXYGEN_FOUND)
ENDIF()

# By default, MSVC has a stack size of 1000000.
# Allow a user to override this.
IF(MSVC)
  SET(NC_MSVC_STACK_SIZE 40000000 CACHE STRING "Default stack size for MSVC-based projects.")
  # By default, CMake sets the stack to 1000000.
  # Remove this limitation.
  # See here for more details:
  # http://www.cmake.org/pipermail/cmake/2009-April/028710.html
  SET(CMAKE_EXE_LINKER_FLAGS "${CMAKE_EXE_LINKER_FLAGS} /STACK:${NC_MSVC_STACK_SIZE}")
  SET(CMAKE_SHARED_LINKER_FLAGS "${CMAKE_SHARED_LINKER_FLAGS} /STACK:${NC_MSVC_STACK_SIZE}")
  SET(CMAKE_MODULE_LINKER_FLAGS "${CMAKE_MODULE_LINKER_FLAGS} /STACK:${NC_MSVC_STACK_SIZE}")
ENDIF()

# Set some of the options as advanced.
MARK_AS_ADVANCED(ENABLE_INTERNAL_DOCS VALGRIND_TESTS ENABLE_PNETCDF ENABLE_COVERAGE_TESTS)
MARK_AS_ADVANCED(ENABLE_DAP_REMOTE_TESTS ENABLE_DAP_LONG_TESTS USE_REMOTE_CDASH)

################################
# Option checks
################################

#####
# System inspection checks
#####
INCLUDE_DIRECTORIES(${CMAKE_SOURCE_DIR}/include)
INCLUDE_DIRECTORIES(${CMAKE_SOURCE_DIR}/oc2)
INCLUDE_DIRECTORIES(${CMAKE_SOURCE_DIR}/libsrc)
SET(CMAKE_REQUIRED_INCLUDES ${CMAKE_SOURCE_DIR}/libsrc)

#
# Library include checks
CHECK_INCLUDE_FILE("math.h"      HAVE_MATH_H)
CHECK_INCLUDE_FILE("unistd.h"  HAVE_UNISTD_H)
# Solve a compatibility issue in ncgen/, which checks
# for NO_UNISTD_H
IF(NOT HAVE_UNISTD_H)
  SET(YY_NO_UNISTD_H TRUE)
ENDIF()

CHECK_INCLUDE_FILE("alloca.h"  HAVE_ALLOCA_H)
CHECK_INCLUDE_FILE("malloc.h"    HAVE_MALLOC_H)
CHECK_INCLUDE_FILE("ctype.h"   HAVE_CTYPE_H)
CHECK_INCLUDE_FILE("dirent.h"  HAVE_DIRENT_H)
CHECK_INCLUDE_FILE("dlfcn.h"   HAVE_DLFCN_H)
CHECK_INCLUDE_FILE("errno.h"   HAVE_ERRNO_H)
CHECK_INCLUDE_FILE("fcntl.h"   HAVE_FCNTL_H)
CHECK_INCLUDE_FILE("getopt.h"  HAVE_GETOPT_H)
CHECK_INCLUDE_FILE("stdbool.h"   HAVE_STDBOOL_H)
CHECK_INCLUDE_FILE("locale.h"  HAVE_LOCAL_H)
CHECK_INCLUDE_FILE("stdint.h"  HAVE_STDINT_H)
CHECK_INCLUDE_FILE("stdio.h"   HAVE_STDIO_H)
CHECK_INCLUDE_FILE("stdlib.h"  HAVE_STDLIB_H)
CHECK_INCLUDE_FILE("stdarg.h"    HAVE_STDARG_H)
CHECK_INCLUDE_FILE("strings.h"   HAVE_STRINGS_H)
CHECK_INCLUDE_FILE("signal.h"    HAVE_SIGNAL_H)
CHECK_INCLUDE_FILE("sys/dir.h"   HAVE_SYS_DIR_H)
CHECK_INCLUDE_FILE("sys/ndir.h"  HAVE_SYS_NDIR_H)
CHECK_INCLUDE_FILE("sys/param.h" HAVE_SYS_PARAM_H)
CHECK_INCLUDE_FILE("sys/stat.h"  HAVE_SYS_STAT_H)
CHECK_INCLUDE_FILE("sys/time.h"  HAVE_SYS_TIME_H)
CHECK_INCLUDE_FILE("sys/types.h" HAVE_SYS_TYPES_H)
CHECK_INCLUDE_FILE("sys/wait.h"  HAVE_SYS_WAIT_H)
CHECK_INCLUDE_FILE("sys/resource.h" HAVE_SYS_RESOURCE_H)
CHECK_INCLUDE_FILE("fcntl.h"  HAVE_FCNTL_H)
CHECK_INCLUDE_FILE("inttypes.h"  HAVE_INTTYPES_H)
CHECK_INCLUDE_FILE("pstdint.h"  HAVE_PSTDINT_H)
CHECK_INCLUDE_FILE("endian.h" HAVE_ENDIAN_H)
CHECK_INCLUDE_FILE("BaseTsd.h"  HAVE_BASETSD_H)
CHECK_INCLUDE_FILE("stddef.h"   HAVE_STDDEF_H)

# Type checks
CHECK_TYPE_SIZE("char"      SIZEOF_CHAR)
CHECK_TYPE_SIZE("double"    SIZEOF_DOUBLE)
CHECK_TYPE_SIZE("float"     SIZEOF_FLOAT)
CHECK_TYPE_SIZE("int"       SIZEOF_INT)
CHECK_TYPE_SIZE("long"      SIZEOF_LONG)
CHECK_TYPE_SIZE("long long" SIZEOF_LONG_LONG)
CHECK_TYPE_SIZE("off_t"     SIZEOF_OFF_T)
CHECK_TYPE_SIZE("off64_t"   SIZEOF_OFF64_T)
CHECK_TYPE_SIZE("short"     SIZEOF_SHORT)
CHECK_TYPE_SIZE("size_t"    SIZEOF_SIZE_T)
CHECK_TYPE_SIZE("ssize_t"   SIZEOF_SSIZE_T)
# __int64 is used on Windows for large file support.
CHECK_TYPE_SIZE("__int64"   SIZEOF___INT_64)
CHECK_TYPE_SIZE("uchar"     SIZEOF_UCHAR)
CHECK_TYPE_SIZE("int64_t"   SIZEOF_INT64_T)
CHECK_TYPE_SIZE("uint64_t"  SIZEOF_UINT64_T)

# On windows systems, we redefine off_t as __int64
# to enable LFS. This is true on 32 and 64 bit system.s
# We must redefine SIZEOF_OFF_T to match.
IF(MSVC AND SIZEOF___INT_64)
  SET(SIZEOF_OFF_T  ${SIZEOF___INT_64})
ENDIF()

IF(SIZEOF_SSIZE_T)
  SET(HAVE_SSIZE_T 1)
ELSE()
  CHECK_TYPE_SIZE("SSIZE_T" SIZEOF_SSIZE_T)
  IF(SIZEOF_SSIZE_T)
    SET(HAVE_SSIZE_T 1)
  ENDIF()
ENDIF()

# Check for various functions.
CHECK_FUNCTION_EXISTS(fsync HAVE_FSYNC)
CHECK_FUNCTION_EXISTS(strlcat   HAVE_STRLCAT)
CHECK_FUNCTION_EXISTS(strerror  HAVE_STRERROR)
CHECK_FUNCTION_EXISTS(snprintf  HAVE_SNPRINTF)
CHECK_FUNCTION_EXISTS(strchr  HAVE_STRCHR)
CHECK_FUNCTION_EXISTS(strrchr HAVE_STRRCHR)
CHECK_FUNCTION_EXISTS(strcat  HAVE_STRCAT)
CHECK_FUNCTION_EXISTS(strcpy  HAVE_STRCPY)
CHECK_FUNCTION_EXISTS(strdup  HAVE_STRDUP)
CHECK_FUNCTION_EXISTS(strcasecmp  HAVE_STRCASECMP)
CHECK_FUNCTION_EXISTS(strtod  HAVE_STRTOD)
CHECK_FUNCTION_EXISTS(strtoll HAVE_STRTOLL)
CHECK_FUNCTION_EXISTS(strtoull  HAVE_STROULL)
CHECK_FUNCTION_EXISTS(strstr  HAVE_STRSTR)
CHECK_FUNCTION_EXISTS(mkstemp HAVE_MKSTEMP)
CHECK_FUNCTION_EXISTS(rand  HAVE_RAND)
CHECK_FUNCTION_EXISTS(gettimeofday  HAVE_GETTIMEOFDAY)
CHECK_FUNCTION_EXISTS(fsync HAVE_FSYNC)
CHECK_FUNCTION_EXISTS(MPI_Comm_f2C  HAVE_MPI_COMM_F2C)
CHECK_FUNCTION_EXISTS(memmove HAVE_MEMMOVE)
CHECK_FUNCTION_EXISTS(getpagesize HAVE_GETPAGESIZE)
CHECK_FUNCTION_EXISTS(sysconf HAVE_SYSCONF)
CHECK_FUNCTION_EXISTS(mremap  HAVE_MREMAP)
CHECK_FUNCTION_EXISTS(getrlimit HAVE_GETRLIMIT)
CHECK_FUNCTION_EXISTS(_filelengthi64 HAVE_FILE_LENGTH_I64)

#####
# End system inspection checks.
#####

# Create config.h file.
configure_file("${netCDF_SOURCE_DIR}/config.h.cmake.in"
  "${netCDF_BINARY_DIR}/config.h")
ADD_DEFINITIONS(-DHAVE_CONFIG_H)
INCLUDE_DIRECTORIES(${netCDF_BINARY_DIR})
# End autotools-style checs for config.h

#####
# Set core names of the libraries.
#####
SET(netCDF_LIB_CORENAME  "netcdf")

#####
# Set the true names of all the libraries, if customized by external project
#####
# Recurse into other subdirectories.
add_subdirectory("include")
add_subdirectory(libdispatch)
add_subdirectory(libsrc)

IF(USE_PNETCDF)
  add_subdirectory(libsrc5)
ENDIF(USE_PNETCDF)

IF(USE_HDF5)
  add_subdirectory(libsrc4)
ENDIF(USE_HDF5)

IF(USE_DAP)
  ADD_SUBDIRECTORY(oc2)
  ADD_SUBDIRECTORY(libdap2)
ENDIF()

add_subdirectory(liblib)

# For tests and utilities, we are no longer
# exporting symbols but rather importing them.
IF(BUILD_DLL)
  REMOVE_DEFINITIONS(-DDLL_EXPORT)
ENDIF()

# Enable Utilities.
IF(BUILD_UTILITIES)
  INCLUDE_DIRECTORIES(ncdump)
  ADD_SUBDIRECTORY(ncgen)
  ADD_SUBDIRECTORY(ncgen3)
  ADD_SUBDIRECTORY(ncdump)
ENDIF()

# Enable tests
IF(ENABLE_TESTS)
  IF(ENABLE_V2_API)
    ADD_SUBDIRECTORY(nctest)
  ENDIF()
  ADD_SUBDIRECTORY(nc_test)
  IF(USE_NETCDF4)
    ADD_SUBDIRECTORY(nc_test4)
    ADD_SUBDIRECTORY(h5_test)
  ENDIF()
  IF(USE_DAP AND ENABLE_DAP_REMOTE_TESTS)
    ADD_SUBDIRECTORY(ncdap_test)
  ENDIF()

  IF(ENABLE_EXAMPLES)
    ADD_SUBDIRECTORY(examples)
  ENDIF()
ENDIF()

# Code to generate an export header
#GENERATE_EXPORT_HEADER(netcdf
# BASE_NAME netcdf
# EXPORT_MACRO_NAME netcdf_EXPORT
# EXPORT_FILE_NAME netcdf_Export.h
# STATIC_DEFINE netcdf_BUILT_AS_STATIC
#)

#####
# Build doxygen documentation, if need be.
#####
ADD_SUBDIRECTORY(docs)
#####
# Moving on to CPack, install packages.
#####
INSTALL(FILES ${netCDF_SOURCE_DIR}/include/netcdf.h
  DESTINATION ${CMAKE_INSTALL_INCLUDEDIR} 
  COMPONENT headers)

IF(ENABLE_PNETCDF OR ENABLE_PARALLEL)
  INSTALL(FILES ${netCDF_SOURCE_DIR}/include/netcdf_par.h
    DESTINATION ${CMAKE_INSTALL_INCLUDEDIR} 
    COMPONENT headers)
ENDIF()

# Install the dependencies. This is Windows/Visual studio only,
# and mirrors the configuration used on the build system.  It is
# a less-than-optimal system, but it's what we currently have, and
# the only way to avoid making the user build all the dependencies
# themselves.
IF(MSVC)
  INSTALL(DIRECTORY ${CMAKE_PREFIX_PATH} DESTINATION "deps" COMPONENT dependencies)
ENDIF()

# Subdirectory CMakeLists.txt files should specify their own
# 'install' files.
# Including 'CPack' kicks everything off.
INCLUDE(InstallRequiredSystemLibraries)
CONFIGURE_FILE(
  ${CMAKE_CURRENT_SOURCE_DIR}/FixBundle.cmake.in
  ${CMAKE_CURRENT_BINARY_DIR}/FixBundle.cmake
  @ONLY
  )
#INSTALL(SCRIPT ${CMAKE_CURRENT_BINARY_DIR}/FixBundle.cmake)

# Create CMake package configuration files. With these, other packages using
# cmake should be able to find netcdf using find_package and find_library.
# This call is paired with one in liblib.
install(EXPORT netcdf-targets
  DESTINATION share/cmake
  COMPONENT documentation)

configure_file(
  ${netCDF_SOURCE_DIR}/netcdf-config.cmake.in
  ${netCDF_BINARY_DIR}/netcdf-config.cmake @ONLY)

configure_file(
  ${netCDF_SOURCE_DIR}/netcdf-config-version.cmake.in
  ${netCDF_BINARY_DIR}/netcdf-config-version.cmake @ONLY)

install(FILES ${netCDF_BINARY_DIR}/netcdf-config.cmake
  ${netCDF_BINARY_DIR}/netcdf-config-version.cmake
  DESTINATION share/cmake/netcdf)


###
# Create pkgconfig files.
###

IF(NOT DEFINED CMAKE_INSTALL_LIBDIR)
  SET(CMAKE_INSTALL_LIBDIR lib)
ENDIF(NOT DEFINED CMAKE_INSTALL_LIBDIR)

# Set
SET(prefix ${CMAKE_INSTALL_PREFIX})
SET(exec_prefix ${CMAKE_INSTALL_PREFIX})
SET(libdir ${CMAKE_INSTALL_PREFIX}/${CMAKE_INSTALL_LIBDIR})
SET(includedir ${CMAKE_INSTALL_PREFIX}/include)
SET(CC ${CMAKE_C_COMPILER})

# Process all dependency libraries and create a string
# used when parsing netcdf.pc.in

IF(NOT BUILD_SHARED_LIBS)
  FOREACH(_LIB ${ALL_TLL_LIBS})
    GET_FILENAME_COMPONENT(_LIB_NAME ${_LIB} NAME_WE)
    STRING(REGEX REPLACE "^lib" "" _NAME ${_LIB_NAME})
    LIST(APPEND NC_LIBS "-l${_NAME}")
    GET_FILENAME_COMPONENT(_LIB_DIR ${_LIB} PATH)
    LIST(APPEND LINKFLAGS "-L${_LIB_DIR}")
  ENDFOREACH()
ENDIF(NOT BUILD_SHARED_LIBS)

SET(NC_LIBS "-lnetcdf ${NC_LIBS}")

STRING(REPLACE ";" " " NC_LIBS "${NC_LIBS}")
STRING(REPLACE ";" " " LINKFLAGS "${LINKFLAGS}")

LIST(REMOVE_DUPLICATES NC_LIBS)
LIST(REMOVE_DUPLICATES LINKFLAGS)

configure_file(
  ${netCDF_SOURCE_DIR}/netcdf.pc.in
  ${netCDF_BINARY_DIR}/netcdf.pc @ONLY)

FILE(MAKE_DIRECTORY ${netCDF_BINARY_DIR}/tmp)
configure_file("${netCDF_SOURCE_DIR}/nc-config.cmake.in"
  "${netCDF_BINARY_DIR}/tmp/nc-config" @ONLY)
FILE(COPY "${netCDF_BINARY_DIR}/tmp/nc-config"
  DESTINATION ${netCDF_BINARY_DIR}/
  FILE_PERMISSIONS OWNER_READ OWNER_WRITE OWNER_EXECUTE GROUP_READ GROUP_EXECUTE WORLD_READ WORLD_EXECUTE)

INSTALL(FILES ${netCDF_BINARY_DIR}/netcdf.pc
  DESTINATION ${CMAKE_INSTALL_LIBDIR}/pkgconfig)

INSTALL(PROGRAMS ${netCDF_BINARY_DIR}/nc-config 
  DESTINATION ${CMAKE_INSTALL_BINDIR}
  COMPONENT utilities)

###
# End pkgconfig, nc-config file creation.
###

####
# End CMake package configuration files.
#####
# Various options for CPACK
#####

##
# Declare exclusions list used when building a source file.
# NOTE!! This list uses regular expressions, NOT wildcards!!
##
SET(CPACK_SOURCE_IGNORE_FILES "${CPACK_SOURCE_IGNORE_FILES}"
  "/expecttds3/"
  "/nocacheremote3/"
  "/nocacheremote4/"
  "/special3/"
  "${CMAKE_BINARY_DIR}/*"
  "/myhtml/*"
  "/.svn/"
  "my.*\\\\.sh"
  "/.deps/"
  "/.libs"
  "/html/"
  ".*\\\\.jar"
  ".*\\\\.jdl"
  ".*\\\\.sed"
  ".*\\\\.proto"
  ".*\\\\.texi"
  ".*\\\\.example"
  "Make0"
  "/obsolete/"
  "/unknown/"
  ".*~"
  )
CONFIGURE_FILE(${CMAKE_CURRENT_SOURCE_DIR}/COPYRIGHT
  ${CMAKE_CURRENT_BINARY_DIR}/COPYRIGHT.txt
  @ONLY
  )

SET(CPACK_RESOURCE_FILE_LICENSE "${CMAKE_CURRENT_BINARY_DIR}/COPYRIGHT.txt")
IF(NOT CPACK_PACK_VERSION)
  SET(CPACK_PACKAGE_VERSION ${VERSION})
ENDIF()

IF(APPLE)
  SET(CPACK_SOURCE_GENERATOR "TGZ")
  SET(CPACK_GENERATOR "PackageMaker" "STGZ" "TBZ2" "TGZ" "ZIP")
ENDIF()

# Create an 'uninstall' target.
CONFIGURE_FILE(
  "${CMAKE_CURRENT_SOURCE_DIR}/cmake_uninstall.cmake.in"
  "${CMAKE_CURRENT_BINARY_DIR}/cmake_uninstall.cmake"
  IMMEDIATE @ONLY)

ADD_CUSTOM_TARGET(uninstall
  COMMAND ${CMAKE_COMMAND} -P ${CMAKE_CURRENT_BINARY_DIR}/cmake_uninstall.cmake)

## Customize some of the package component descriptions
set(CPACK_COMPONENT_UTILITIES_DISPLAY_NAME "netCDF Utilities")
set(CPACK_COMPONENT_LIBRARIES_DISPLAY_NAME "netCDF Libraries")
set(CPACK_COMPONENT_HEADERS_DISPLAY_NAME "netCDF Headers")
set(CPACK_COMPONENT_DEPENDENCIES_DISPLAY_NAME "netCDF Dependencies")
set(CPACK_COMPONENT_DOCUMENTATION_DISPLAY_NAME "netCDF Documentation")


set (CPACK_COMPONENT_UTILITIES_DESCRIPTION
  "The netCDF Utilities")
set (CPACK_COMPONENT_LIBRARIES_DESCRIPTION
  "The netCDF Libraries")
set (CPACK_COMPONENT_HEADERS_DESCRIPTION
  "C header files for use with netCDF")
set (CPACK_COMPONENT_DEPENDENCIES_DESCRIPTION
  "Dependencies for this build of netCDF")
set (CPACK_COMPONENT_DOCUMENTATION_DESCRIPTION
  "The netCDF user documentation.")
print_conf_summary()

# Enable Makedist files.
ADD_MAKEDIST()
ENABLE_MAKEDIST(README.md COPYRIGHT RELEASE_NOTES.md INSTALL INSTALL.cmake test_prog.c lib_flags.am cmake CMakeLists.txt COMPILE.cmake.txt config.h.cmake.in cmake_uninstall.cmake.in netcdf-config-version.cmake.in netcdf-config.cmake.in FixBundle.cmake.in nc-config.cmake.in configure configure.ac install-sh config.h.in config.sub CTestConfig.cmake.in)

# CPack inclusion must come last.
INCLUDE(CPack)