netcdf-c/libdap4/d4chunk.c

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Primary change: add dap4 support Specific changes: 1. Add dap4 code: libdap4 and dap4_test. Note that until the d4ts server problem is solved, dap4 is turned off. 2. Modify various files to support dap4 flags: configure.ac, Makefile.am, CMakeLists.txt, etc. 3. Add nc_test/test_common.sh. This centralizes the handling of the locations of various things in the build tree: e.g. where is ncgen.exe located. See nc_test/test_common.sh for details. 4. Modify .sh files to use test_common.sh 5. Obsolete separate oc2 by moving it to be part of netcdf-c. This means replacing code with netcdf-c equivalents. 5. Add --with-testserver to configure.ac to allow override of the servers to be used for --enable-dap-remote-tests. 6. There were multiple versions of nctypealignment code. Try to centralize in libdispatch/doffset.c and include/ncoffsets.h 7. Add a unit test for the ncuri code because of its complexity. 8. Move the findserver code out of libdispatch and into a separate, self contained program in ncdap_test and dap4_test. 9. Move the dispatch header files (nc{3,4}dispatch.h) to .../include because they are now shared by modules. 10. Revamp the handling of TOPSRCDIR and TOPBUILDDIR for shell scripts. 11. Make use of MREMAP if available 12. Misc. minor changes e.g. - #include <config.h> -> #include "config.h" - Add some no-install headers to /include - extern -> EXTERNL and vice versa as needed - misc header cleanup - clean up checking for misc. unix vs microsoft functions 13. Change copyright decls in some files to point to LICENSE file. 14. Add notes to RELEASENOTES.md
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/*********************************************************************
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* Copyright 2018, UCAR/Unidata
Primary change: add dap4 support Specific changes: 1. Add dap4 code: libdap4 and dap4_test. Note that until the d4ts server problem is solved, dap4 is turned off. 2. Modify various files to support dap4 flags: configure.ac, Makefile.am, CMakeLists.txt, etc. 3. Add nc_test/test_common.sh. This centralizes the handling of the locations of various things in the build tree: e.g. where is ncgen.exe located. See nc_test/test_common.sh for details. 4. Modify .sh files to use test_common.sh 5. Obsolete separate oc2 by moving it to be part of netcdf-c. This means replacing code with netcdf-c equivalents. 5. Add --with-testserver to configure.ac to allow override of the servers to be used for --enable-dap-remote-tests. 6. There were multiple versions of nctypealignment code. Try to centralize in libdispatch/doffset.c and include/ncoffsets.h 7. Add a unit test for the ncuri code because of its complexity. 8. Move the findserver code out of libdispatch and into a separate, self contained program in ncdap_test and dap4_test. 9. Move the dispatch header files (nc{3,4}dispatch.h) to .../include because they are now shared by modules. 10. Revamp the handling of TOPSRCDIR and TOPBUILDDIR for shell scripts. 11. Make use of MREMAP if available 12. Misc. minor changes e.g. - #include <config.h> -> #include "config.h" - Add some no-install headers to /include - extern -> EXTERNL and vice versa as needed - misc header cleanup - clean up checking for misc. unix vs microsoft functions 13. Change copyright decls in some files to point to LICENSE file. 14. Add notes to RELEASENOTES.md
2017-03-09 08:01:10 +08:00
* See netcdf/COPYRIGHT file for copying and redistribution conditions.
*********************************************************************/
#include "d4includes.h"
#include "d4chunk.h"
/**************************************************/
/* Header flags */
#define LAST_CHUNK (1)
#define ERR_CHUNK (2)
#define LITTLE_ENDIAN_CHUNK (4)
#define NOCHECKSUM_CHUNK (8)
#define ALL_CHUNK_FLAGS (LAST_CHUNK|ERR_CHUNK|LITTLE_ENDIAN_CHUNK|NOCHECKSUM_CHUNK)
/**************************************************/
/*
Given a packet as read from the wire via http (or a file), convert in
place from chunked format to a single continguous set of bytes. If an
error packet is recovered, then make that available to the caller and
return an error. Also return whether the data was big endian encoded
and whether it has checksums.
Notes:
*/
/* Define a local struct for convenience */
struct HDR {unsigned int flags; unsigned int count;};
/* Forward */
static void* getheader(void* p, struct HDR* hdr, int hostlittleendian);
static int processerrchunk(NCD4meta* metadata, void* errchunk, unsigned int count);
/**************************************************/
int
NCD4_dechunk(NCD4meta* metadata)
{
unsigned char* p;
unsigned char* q;
struct HDR hdr;
if(metadata->mode == NCD4_DSR)
return THROW(NC_EDMR);
metadata->serial.errdata = NULL;
metadata->serial.dmr = NULL;
metadata->serial.dap = NULL;
metadata->serial.hostlittleendian = NCD4_isLittleEndian();
metadata->serial.remotelittleendian = 0; /* do not actually know yet */
metadata->serial.remotechecksumming = 0; /* do not actually know yet */
metadata->localchecksumming = 0; /* do not actually know yet */
/* Assume proper mode has been inferred already. */
/* Verify the mode; assume that the <?xml...?> is optional */
q = metadata->serial.rawdata;
if(memcmp(q,"<?xml",strlen("<?xml"))==0
|| memcmp(q,"<Dataset",strlen("<Dataset"))==0) {
if(metadata->mode != NCD4_DMR)
return THROW(NC_EDMR);
/* setup as dmr only */
metadata->serial.dmr = (char*)metadata->serial.rawdata; /* temp */
metadata->serial.dmr[metadata->serial.rawsize-1] = '\0';
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metadata->serial.dmr = strdup((char *)q);
Primary change: add dap4 support Specific changes: 1. Add dap4 code: libdap4 and dap4_test. Note that until the d4ts server problem is solved, dap4 is turned off. 2. Modify various files to support dap4 flags: configure.ac, Makefile.am, CMakeLists.txt, etc. 3. Add nc_test/test_common.sh. This centralizes the handling of the locations of various things in the build tree: e.g. where is ncgen.exe located. See nc_test/test_common.sh for details. 4. Modify .sh files to use test_common.sh 5. Obsolete separate oc2 by moving it to be part of netcdf-c. This means replacing code with netcdf-c equivalents. 5. Add --with-testserver to configure.ac to allow override of the servers to be used for --enable-dap-remote-tests. 6. There were multiple versions of nctypealignment code. Try to centralize in libdispatch/doffset.c and include/ncoffsets.h 7. Add a unit test for the ncuri code because of its complexity. 8. Move the findserver code out of libdispatch and into a separate, self contained program in ncdap_test and dap4_test. 9. Move the dispatch header files (nc{3,4}dispatch.h) to .../include because they are now shared by modules. 10. Revamp the handling of TOPSRCDIR and TOPBUILDDIR for shell scripts. 11. Make use of MREMAP if available 12. Misc. minor changes e.g. - #include <config.h> -> #include "config.h" - Add some no-install headers to /include - extern -> EXTERNL and vice versa as needed - misc header cleanup - clean up checking for misc. unix vs microsoft functions 13. Change copyright decls in some files to point to LICENSE file. 14. Add notes to RELEASENOTES.md
2017-03-09 08:01:10 +08:00
if(metadata->serial.dmr == NULL)
return THROW(NC_ENOMEM);
return THROW(NC_NOERR);
}
/* We must be processing a DAP mode packet */
p = metadata->serial.rawdata;
metadata->serial.dap = p;
#ifdef D4DUMPRAW
NCD4_tagdump(metadata->serial.rawsize,metadata->serial.rawdata,0,"RAW");
#endif
/* Get the DMR chunk header*/
p = getheader(p,&hdr,metadata->serial.hostlittleendian);
if(hdr.count == 0)
return THROW(NC_EDMR);
if(hdr.flags & ERR_CHUNK) {
return processerrchunk(metadata, (void*)p, hdr.count);
}
metadata->serial.remotechecksumming = ((hdr.flags & NOCHECKSUM_CHUNK) ? 0 : 1);
metadata->localchecksumming = metadata->serial.remotechecksumming;
metadata->serial.remotelittleendian = ((hdr.flags & LITTLE_ENDIAN_CHUNK) ? 1 : 0);
metadata->serial.dmr = (char*)p;
Primary change: add dap4 support Specific changes: 1. Add dap4 code: libdap4 and dap4_test. Note that until the d4ts server problem is solved, dap4 is turned off. 2. Modify various files to support dap4 flags: configure.ac, Makefile.am, CMakeLists.txt, etc. 3. Add nc_test/test_common.sh. This centralizes the handling of the locations of various things in the build tree: e.g. where is ncgen.exe located. See nc_test/test_common.sh for details. 4. Modify .sh files to use test_common.sh 5. Obsolete separate oc2 by moving it to be part of netcdf-c. This means replacing code with netcdf-c equivalents. 5. Add --with-testserver to configure.ac to allow override of the servers to be used for --enable-dap-remote-tests. 6. There were multiple versions of nctypealignment code. Try to centralize in libdispatch/doffset.c and include/ncoffsets.h 7. Add a unit test for the ncuri code because of its complexity. 8. Move the findserver code out of libdispatch and into a separate, self contained program in ncdap_test and dap4_test. 9. Move the dispatch header files (nc{3,4}dispatch.h) to .../include because they are now shared by modules. 10. Revamp the handling of TOPSRCDIR and TOPBUILDDIR for shell scripts. 11. Make use of MREMAP if available 12. Misc. minor changes e.g. - #include <config.h> -> #include "config.h" - Add some no-install headers to /include - extern -> EXTERNL and vice versa as needed - misc header cleanup - clean up checking for misc. unix vs microsoft functions 13. Change copyright decls in some files to point to LICENSE file. 14. Add notes to RELEASENOTES.md
2017-03-09 08:01:10 +08:00
metadata->serial.dmr[hdr.count-1] = '\0';
metadata->serial.dmr = strdup(metadata->serial.dmr);
if(metadata->serial.dmr == NULL)
return THROW(NC_ENOMEM);
p += hdr.count;
if(hdr.flags & LAST_CHUNK)
return THROW(NC_ENODATA);
/* Read and compress the data chunks */
q = metadata->serial.dap;
for(;;) {
p = getheader(p,&hdr,metadata->serial.hostlittleendian);
if(hdr.flags & ERR_CHUNK) {
return processerrchunk(metadata, (void*)p, hdr.count);
}
/* data chunk; possibly last; possibly empty */
if(hdr.count > 0) {
d4memmove(q,p,hdr.count); /* will overwrite the header */
p += hdr.count;
q += hdr.count;
}
if(hdr.flags & LAST_CHUNK) break;
}
metadata->serial.dapsize = (size_t)DELTA(q,metadata->serial.dap);
#ifdef D4DUMPDMR
fprintf(stderr,"%s\n",metadata->serial.dmr);
fflush(stderr);
#endif
#ifdef D4DUMPDAP
NCD4_tagdump(metadata->serial.dapsize,metadata->serial.dap,0,"DAP");
#endif
return THROW(NC_NOERR);
}
static int
processerrchunk(NCD4meta* metadata, void* errchunk, unsigned int count)
{
metadata->serial.errdata = (char*)d4alloc(count+1);
if(metadata->serial.errdata == NULL)
return THROW(NC_ENOMEM);
memcpy(metadata->serial.errdata,errchunk,count);
metadata->serial.errdata[count] = '\0';
return THROW(NC_ENODATA); /* slight lie */
}
/* At the moment, the Hyrax test server
is serving up the chunk data as little endian.
So use a heuristic to see which endianness
makes the more sense.
This fails for very small dap data sections.
*/
static void*
getheader(void* p, struct HDR* hdr, int hostlittleendian)
{
unsigned char bytes[4];
#ifdef HYRAXHACK
struct HDR hyrax;
unsigned char orig[4];
memcpy(orig,p,sizeof(bytes));/* save a copy */
#endif
memcpy(bytes,p,sizeof(bytes));
p = INCR(p,4); /* on-the-wire hdr is 4 bytes */
/* assume header is network (big) order */
hdr->flags = bytes[0]; /* big endian => flags are in byte 0 */
bytes[0] = 0; /* so we can do byte swap to get count */
if(hostlittleendian)
swapinline32(bytes); /* host is little endian */
hdr->count = *(unsigned int*)bytes; /* get count */
#ifdef HYRAXHACK
memcpy(bytes,orig,sizeof(bytes)); /* restore */
hyrax.flags = bytes[3];
bytes[3] = 0; /* so we can do byte swap to get count */
if(!hostlittleendian)
swapinline32(bytes); /* host is big endian */
hyrax.count = *(unsigned int*)bytes; /* get count */
/* See which makes more sense */
if(hyrax.flags <= ALL_CHUNK_FLAGS && hyrax.count >= 0 && hyrax.count < hdr->count) {
/* Use hyrax version */
*hdr = hyrax;
}
#endif
return p;
}
/**
Given a raw response, attempt to infer the mode: DMR, DAP, DSR.
Since DSR is not standardizes, it becomes the default.
*/
int
NCD4_infermode(NCD4meta* meta)
{
d4size_t size = meta->serial.rawsize;
char* raw = meta->serial.rawdata;
if(size < 16)
return THROW(NC_EDAP); /* must have at least this to hold a hdr + partial dmr*/
if(memcmp(raw,"<?xml",strlen("<?xml"))==0
|| memcmp(raw,"<Dataset",strlen("<Dataset"))==0) {
meta->mode = NCD4_DMR;
goto done;
}
raw += 4; /* Pretend we have a DAP hdr */
if(memcmp(raw,"<?xml",strlen("<?xml"))==0
|| memcmp(raw,"<Dataset",strlen("<Dataset"))==0) {
meta->mode = NCD4_DAP;
goto done;
}
/* Default to DSR */
meta->mode = NCD4_DSR;
done:
return NC_NOERR;
}