netcdf-c/libdispatch/dutil.c

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/*********************************************************************
* Copyright 2018, UCAR/Unidata
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* See netcdf/COPYRIGHT file for copying and redistribution conditions.
*********************************************************************/
#include "config.h"
#include <stdlib.h>
#include <string.h>
#include <stdio.h>
#ifdef HAVE_UNISTD_H
#include <unistd.h>
#endif
#ifdef HAVE_SYS_STAT_H
#include <sys/stat.h>
#endif
#ifdef HAVE_FCNTL_H
#include <fcntl.h>
#endif
#ifdef _MSC_VER
#include <io.h>
#endif
#include "netcdf.h"
#include "ncuri.h"
#include "ncbytes.h"
#include "nclist.h"
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#include "nclog.h"
#include "ncwinpath.h"
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extern int mkstemp(char *template);
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#define NC_MAX_PATH 4096
#define LBRACKET '['
#define RBRACKET ']'
/**************************************************/
/**
* Provide a hidden interface to allow utilities
* to check if a given path name is really an ncdap4 url.
* If no, return null, else return basename of the url
* minus any extension.
*/
int
NC__testurl(const char* path, char** basenamep)
{
NCURI* uri;
int ok = NC_NOERR;
if(ncuriparse(path,&uri))
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ok = NC_EURL;
else {
char* slash = (uri->path == NULL ? NULL : strrchr(uri->path, '/'));
char* dot;
if(slash == NULL) slash = (char*)path; else slash++;
slash = nulldup(slash);
if(slash == NULL)
dot = NULL;
else
dot = strrchr(slash, '.');
if(dot != NULL && dot != slash) *dot = '\0';
if(basenamep)
*basenamep=slash;
else if(slash)
free(slash);
}
ncurifree(uri);
return ok;
}
/* Return 1 if this machine is little endian */
int
NC_isLittleEndian(void)
{
union {
unsigned char bytes[SIZEOF_INT];
int i;
} u;
u.i = 1;
return (u.bytes[0] == 1 ? 1 : 0);
}
char*
NC_backslashEscape(const char* s)
{
const char* p;
char* q;
size_t len;
char* escaped = NULL;
len = strlen(s);
escaped = (char*)malloc(1+(2*len)); /* max is everychar is escaped */
if(escaped == NULL) return NULL;
for(p=s,q=escaped;*p;p++) {
char c = *p;
switch (c) {
case '\\':
case '/':
case '.':
case '@':
*q++ = '\\'; *q++ = '\\';
break;
default: *q++ = c; break;
}
}
*q = '\0';
return escaped;
}
char*
NC_backslashUnescape(const char* esc)
{
size_t len;
char* s;
const char* p;
char* q;
if(esc == NULL) return NULL;
len = strlen(esc);
s = (char*)malloc(len+1);
if(s == NULL) return NULL;
for(p=esc,q=s;*p;) {
switch (*p) {
case '\\':
p++;
/* fall thru */
default: *q++ = *p++; break;
}
}
*q = '\0';
return s;
}
char*
NC_entityescape(const char* s)
{
const char* p;
char* q;
size_t len;
char* escaped = NULL;
const char* entity;
len = strlen(s);
escaped = (char*)malloc(1+(6*len)); /* 6 = |&apos;| */
if(escaped == NULL) return NULL;
for(p=s,q=escaped;*p;p++) {
char c = *p;
switch (c) {
case '&': entity = "&amp;"; break;
case '<': entity = "&lt;"; break;
case '>': entity = "&gt;"; break;
case '"': entity = "&quot;"; break;
case '\'': entity = "&apos;"; break;
default : entity = NULL; break;
}
if(entity == NULL)
*q++ = c;
else {
len = strlen(entity);
memcpy(q,entity,len);
q+=len;
}
}
*q = '\0';
return escaped;
}
/**
Wrap mktmp and return the generated path,
or null if failed.
Base is the base file path. XXXXX is appended
to allow mktmp add its unique id.
Return the generated path.
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*/
char*
NC_mktmp(const char* base)
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{
int fd;
char* cvtpath = NULL;
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char tmp[NC_MAX_PATH];
#ifdef HAVE_MKSTEMP
mode_t mask;
#endif
/* Make sure that this path conversion has been applied */
cvtpath = NCpathcvt(base);
strncpy(tmp,cvtpath,sizeof(tmp));
nullfree(cvtpath);
strncat(tmp, "XXXXXX", sizeof(tmp) - strlen(tmp) - 1);
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#ifdef HAVE_MKSTEMP
/* Note Potential problem: old versions of this function
leave the file in mode 0666 instead of 0600 */
mask=umask(0077);
fd = mkstemp(tmp);
(void)umask(mask);
#else /* !HAVE_MKSTEMP */
{
#ifdef HAVE_MKTEMP
#ifdef _MSC_VER
/* Use _mktemp_s */
_mktemp_s(tmp,sizeof(tmp)-1);
#else /*!_MSC_VER*/
mktemp(tmp);
tmo[sizeof[tmp]-1] = '\0';
#endif
#else /* !HAVE_MKTEMP */
/* Need to simulate by using some kind of pseudo-random number */
{
int rno = rand();
char spid[7];
if(rno < 0) rno = -rno;
snprintf(spid,sizeof(spid),"%06d",rno);
strncat(tmp,spid,sizeof(tmp) - strlen(tmp) - 1);
}
#endif /* HAVE_MKTEMP */
#ifdef _MSC_VER
fd=NCopen3(tmp,O_RDWR|O_BINARY|O_CREAT, _S_IREAD|_S_IWRITE);
#else
fd=NCopen3(tmp,O_RDWR|O_CREAT|O_EXCL, S_IRWXU);
#endif
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}
#endif /* !HAVE_MKSTEMP */
if(fd < 0) {
nclog(NCLOGERR, "Could not create temp file: %s",tmp);
return NULL;
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} else
close(fd);
return strdup(tmp);
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}
Revert/Improve nc_create + NC_DISKLESS behavior re: https://github.com/Unidata/netcdf-c/issues/1154 Inadvertently, the behavior of NC_DISKLESS with nc_create() was changed in release 4.6.1. Previously, the NC_WRITE flag needed to be explicitly used with NC_DISKLESS in order to cause the created file to be persisted to disk. Additional analyis indicated that the current NC_DISKLESS implementation was seriously flawed. This PR attempts to clean up and regularize the situation with respect to NC_DISKLESS control. One important aspect of diskless operation is that there are two different notions of write. 1. The file is read-write vs read-only when using the netcdf API. 2. The file is persisted or not to disk at nc_close(). Previously, these two were conflated. The rules now are as follows. 1. NC_DISKLESS + NC_WRITE means that the file is read/write using the netcdf API 2. NC_DISKLESS + NC_PERSIST means that the file is persisted to a disk file at nc_close. 3. NC_DISKLESS + NC_PERSIST + NC_WRITE means both 1 and 2. The NC_PERSIST flag is new and takes over the obsolete NC_MPIPOSIX flag. NC_MPIPOSIX is still defined, but is now an alias for the NC_MPIIO flag. It is also now the case that for netcdf-4, NC_DISKLESS is independent of NC_INMEMORY and in fact it is an error to specify both flags simultaneously. Finally, the MMAP code was fixed to use NC_PERSIST as well. Also marked MMAP as deprecated. Also added a test case to test various combinations of NC_DISKLESS, NC_PERSIST, and NC_WRITE. This PR affects a number of files and especially test cases that used NC_DISKLESS. Misc. Unrelated fixes 1. fixed some warnings in ncdump/dumplib.c
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int
NC_readfile(const char* filename, NCbytes* content)
{
int ret = NC_NOERR;
FILE* stream = NULL;
char part[1024];
#ifdef _WIN32
stream = NCfopen(filename,"rb");
#else
stream = NCfopen(filename,"r");
#endif
if(stream == NULL) {ret=errno; goto done;}
for(;;) {
size_t count = fread(part, 1, sizeof(part), stream);
if(count <= 0) break;
ncbytesappendn(content,part,count);
if(ferror(stream)) {ret = NC_EIO; goto done;}
if(feof(stream)) break;
}
ncbytesnull(content);
done:
if(stream) fclose(stream);
return ret;
}
int
NC_writefile(const char* filename, size_t size, void* content)
{
int ret = NC_NOERR;
FILE* stream = NULL;
void* p;
size_t remain;
#ifdef _WIN32
stream = NCfopen(filename,"wb");
#else
stream = NCfopen(filename,"w");
#endif
if(stream == NULL) {ret=errno; goto done;}
p = content;
remain = size;
while(remain > 0) {
size_t written = fwrite(p, 1, remain, stream);
if(ferror(stream)) {ret = NC_EIO; goto done;}
if(feof(stream)) break;
remain -= written;
}
done:
if(stream) fclose(stream);
return ret;
}
/*
Parse a path as a url and extract the modelist.
If the path is not a URL, then return a NULL list.
If a URL, but modelist is empty or does not exist,
then return empty list.
*/
int
NC_getmodelist(const char* path, NClist** modelistp)
{
int stat=NC_NOERR;
NClist* modelist = NULL;
NCURI* uri = NULL;
const char* modestr = NULL;
const char* p = NULL;
const char* endp = NULL;
ncuriparse(path,&uri);
if(uri == NULL) goto done; /* not a uri */
/* Get the mode= arg from the fragment */
modelist = nclistnew();
modestr = ncurilookup(uri,"mode");
if(modestr == NULL || strlen(modestr) == 0) goto done;
/* Parse the mode string at the commas or EOL */
p = modestr;
for(;;) {
char* s;
ptrdiff_t slen;
endp = strchr(p,',');
if(endp == NULL) endp = p + strlen(p);
slen = (endp - p);
if((s = malloc(slen+1)) == NULL) {stat = NC_ENOMEM; goto done;}
memcpy(s,p,slen);
s[slen] = '\0';
nclistpush(modelist,s);
if(*endp == '\0') break;
p = endp+1;
}
done:
if(stat == NC_NOERR) {
if(modelistp) {*modelistp = modelist; modelist = NULL;}
}
ncurifree(uri);
nclistfree(modelist);
return stat;
}
/*
Check "mode=" list for a path and return 1 if present, 0 otherwise.
*/
int
NC_testmode(const char* path, const char* tag)
{
int stat = NC_NOERR;
int found = 0;
int i;
NClist* modelist = NULL;
if((stat = NC_getmodelist(path, &modelist))) goto done;
for(i=0;i<nclistlength(modelist);i++) {
const char* value = nclistget(modelist,i);
if(strcasecmp(tag,value)==0) {found = 1; break;}
}
done:
nclistfree(modelist);
return found;
}