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netcdf-c/libdap2/env

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- Fix NCF-158 to modify ncgen flag defaults. - Fix NCF-157 to modify DAP code to support partial variable retrieval. - Fix of NCF-154 to solve problem of ncgen improperly processing data lists for variables of size greater than 2**18 bytes. - Fix ncgen processing of char variables that have multiple unlimited dimensions. - Partly fix Jira issue: NCF-145 (vlen issues). - Benchmark program nc_test4/tst_ar4_*) requires arguments and should only be invoked inside a shell script; fixed so that they terminate cleanly if invoked with no arguments. - Fix the Doxygen processing so it will work with make distcheck. - Begin switchover to using an alternative to ncio. - Begin support for in-memory (diskless) files.
2012-03-15 07:26:48 +08:00
PARMS=""; ARGS=""; CON="" ; CE=""; OCON="" ; VAR=""
move from oc1.0 to oc2.0; create new dir oc2
2012-08-01 04:34:13 +08:00
alias q0=;alias qq=;alias qv=;alias q=;alias qh=;alias qqh=;alias qall=;alias qv=;alias qo=;
The effect of this change is to make the struct NC structure contain as little file-type specific info as possible. It modifies especially libsrc so that all of the netcdf-3 data that used to be in struct NC is now kept in a separate chunk of data pointed to by the struct NC. This makes all of current protocols consistent: netcdf-3, netcdf-4, and dap.
2012-09-07 03:44:03 +08:00
TOP="/home/dmh/mach/trunk"
fix Jira bug NCF-191 reported by Manke
2012-08-16 01:55:25 +08:00
#TOP="/cygdrive/f/svn/trunk"
The effect of this change is to make the struct NC structure contain as little file-type specific info as possible. It modifies especially libsrc so that all of the netcdf-3 data that used to be in struct NC is now kept in a separate chunk of data pointed to by the struct NC. This makes all of current protocols consistent: netcdf-3, netcdf-4, and dap.
2012-09-07 03:44:03 +08:00
#TOP="/cygdrive/c/Users/dmh/svn/trunk"
move from oc1.0 to oc2.0; create new dir oc2
2012-08-01 04:34:13 +08:00
add more debug output to try to find Ward's bug
2012-08-22 00:46:10 +08:00
#PROG=./ncd
PROG="$TOP/ncdump/ncdump"
move from oc1.0 to oc2.0; create new dir oc2
2012-08-01 04:34:13 +08:00
P=`pwd`
jira: NCF-232: bad conversion of grids
2013-02-26 12:31:06 +08:00
#F="http://geoport.whoi.edu/thredds/dodsC/bathy/crm_vol1.nc"
#F="http://motherlode.ucar.edu:8081/dts/ingrid"
F="file:///home/dmh/mach/trunk/ncdap_test/testdata3/synth9"
move from oc1.0 to oc2.0; create new dir oc2
2012-08-01 04:34:13 +08:00
add more debug output to try to find Ward's bug
2012-08-22 00:46:10 +08:00
PARMS="[log]"
1)Integrate the oc with improved performance
2012-01-30 02:56:29 +08:00
#PARMS="${PARMS}[netcdf3]"
complete update of utilities: ncbyte, nclist, ncuri, nclog
2012-08-09 07:15:18 +08:00
#PARMS="${PARMS}[fetch=disk]"
fix Jira NCF-208; but note that this causes test.06 to fail because thredds mishandles grids
2012-11-22 07:57:42 +08:00
#PARMS="${PARMS}[cache]"
testing nc_inq_format help
2012-08-10 00:57:35 +08:00
#PARMS="${PARMS}[prefetch]"
1)Integrate the oc with improved performance
2012-01-30 02:56:29 +08:00
#PARMS="${PARMS}[nocache]"
jira: NCF-232: bad conversion of grids
2013-02-26 12:31:06 +08:00
PARMS="${PARMS}[noprefetch]"
- Fix NCF-158 to modify ncgen flag defaults. - Fix NCF-157 to modify DAP code to support partial variable retrieval. - Fix of NCF-154 to solve problem of ncgen improperly processing data lists for variables of size greater than 2**18 bytes. - Fix ncgen processing of char variables that have multiple unlimited dimensions. - Partly fix Jira issue: NCF-145 (vlen issues). - Benchmark program nc_test4/tst_ar4_*) requires arguments and should only be invoked inside a shell script; fixed so that they terminate cleanly if invoked with no arguments. - Fix the Doxygen processing so it will work with make distcheck. - Begin switchover to using an alternative to ncio. - Begin support for in-memory (diskless) files.
2012-03-15 07:26:48 +08:00
#PARMS="${PARMS}[wholevar]"
jira: NCF-232: bad conversion of grids
2013-02-26 12:31:06 +08:00
PARMS="${PARMS}[show=fetch]"
2011-04-18 02:56:10 +08:00
move from oc1.0 to oc2.0; create new dir oc2
2012-08-01 04:34:13 +08:00
# Pick in order
if test "x$PROG" = x ; then
for f in ../ncdump/.libs/lt-ncdump ../ncdump/.libs/ncdump ../ncdump/ncdump ./ncd ; do
if test -f $f ; then
PROG="$f"
break;
fi
done
fi
if test "x$PROG" = x ; then
echo "cannot locate ncdump; defaulting"
PROG="../ncdump/ncdump"
fi
added test file
2011-09-22 03:17:57 +08:00
2011-09-17 02:36:08 +08:00
U="${PARMS}$F"
if test "x$CON" != "x" ; then U="${PARMS}$F?$CON"; fi
UALL="${PARMS}$F"
#ARGS="-h $ARGS"
#ARGS="-w $ARGS"
#ARGS="-c $ARGS"
changed form of some static data to work with cxx4
2012-03-09 06:21:12 +08:00
2011-09-17 02:36:08 +08:00
VARGS="--leak-check=full"
move from oc1.0 to oc2.0; create new dir oc2
2012-08-01 04:34:13 +08:00
2011-09-17 02:36:08 +08:00
alias qq="gdb --args $PROG $ARGS '$U'"
alias qv="valgrind $VARGS PROG $ARGS '$U'"
alias q0="$PROG $ARGS '$U'"
alias qh="$PROG -h $ARGS '$U'"
testing nc_inq_format help
2012-08-10 00:57:35 +08:00
alias qk="$PROG -k $ARGS '$U'"
fix e-support YOP-841363 plus a number of coverity found bugs
2012-08-03 02:43:21 +08:00
alias qvar="$PROG -v $VAR $ARGS '$U'"
2011-09-17 02:36:08 +08:00
alias qqh="gdb --args $PROG -h $ARGS '$U'"
alias qall="$PROG -h $ARGS '${UALL}'"
alias qv="valgrind $VARGS $PROG $ARGS '$U'"
fix a bug in libdap2 handling of strings
2012-01-30 12:32:12 +08:00
if test "x$CON" = "x" ; then
1)Integrate the oc with improved performance
2012-01-30 02:56:29 +08:00
alias qo="~/svn/oc/octest -p dds -p datadds -DN -DX1 $F"
fix a bug in libdap2 handling of strings
2012-01-30 12:32:12 +08:00
else
alias qo="~/svn/oc/octest -p dds -p datadds -DN -DX1 -C $CON $F"
fi
fix NCF-120
2011-09-16 00:57:16 +08:00
fixed esupport:RVK-949505 and DML-490284
2011-05-25 05:48:44 +08:00
if test 1 = 0; then
fix NCF-120
2011-09-16 00:57:16 +08:00
F="http://nomads.ncep.noaa.gov:9090/dods/gfs_hd/gfs_hd20110908/gfs_hd_00z"
2011-09-17 02:36:08 +08:00
CON="absvprs[0:10][6:6][0:10][0:10]"
fix NCF-120
2011-09-16 00:57:16 +08:00
CON="absvprs[0:1:64][6:1:6][0:1:360][0:1:719]"
F="http://ferret.pmel.noaa.gov/geoide/dodsC/ct_flux"
fixed escape handling for names
2011-05-28 02:57:35 +08:00
F="http://motherlode.ucar.edu:9080/thredds/dodsC/fmrc/NCEP/GFS/Alaska_191km/NCEP-GFS-Alaska_191km_fmrc.ncx"
fixed esupport:RVK-949505 and DML-490284
2011-05-25 05:48:44 +08:00
F="file:///home/dmh/nc/oc/dataset-duacs-nrt-over30d-global-merged-madt-h"
F="http://oceanwatch.pfeg.noaa.gov/opendap/GLOBEC/GLOBEC_cetaceans"
CON="number&number>6"
F="http://dapper.pmel.noaa.gov/dapper/argo/argo_all.cdp"
#CON="&location.LATITUDE<1&location.LATITUDE>-1"
F="http://test.opendap.org:8080/dods/dts/test.03"
#CON="s0,s1"
F="http://oceanwatch.pfeg.noaa.gov/opendap/GLOBEC/GLOBEC_cetaceans"
CON="lat,lon&lat>42.0&lat<=42.5"
CON="number&number>6"
F="http://motherlode.ucar.edu:8080/thredds/dodsC/testdods/in.nc"
F="http://ceda.ac.uk/dap/neodc/casix/seawifs_plankton/data/monthly/PSC_monthly_1998.nc"
F="http://test.opendap.org:8080/dods/dts/test.02"
F="http://test.opendap.org/opendap/data/nc/coads_climatology.nc"
move from oc1.0 to oc2.0; create new dir oc2
2012-08-01 04:34:13 +08:00
F="file://${TOP}/ncdap_test/testdata3/test.PointFile"
F="file://${TOP}/ncdap_test/testdata3/synth1"
fixed esupport:RVK-949505 and DML-490284
2011-05-25 05:48:44 +08:00
F="http://dods.ndbc.noaa.gov/thredds/dodsC/data/stdmet/46029/46029h9999.nc"
CON="wind_dir[1:10][0:0][0:0]"
completely rewritten constraint system
2011-11-14 12:20:19 +08:00
F="http://nomads.ncep.noaa.gov:9090/dods/gens/gens20111011/gep20_00z"
CON="ens,time,lat,lon,prmslmsl[0:1:0][0:1:64][0:1:10][0:1:10]"
- Fix NCF-158 to modify ncgen flag defaults. - Fix NCF-157 to modify DAP code to support partial variable retrieval. - Fix of NCF-154 to solve problem of ncgen improperly processing data lists for variables of size greater than 2**18 bytes. - Fix ncgen processing of char variables that have multiple unlimited dimensions. - Partly fix Jira issue: NCF-145 (vlen issues). - Benchmark program nc_test4/tst_ar4_*) requires arguments and should only be invoked inside a shell script; fixed so that they terminate cleanly if invoked with no arguments. - Fix the Doxygen processing so it will work with make distcheck. - Begin switchover to using an alternative to ncio. - Begin support for in-memory (diskless) files.
2012-03-15 07:26:48 +08:00
F="http://esrl.noaa.gov/psd/thredds/dodsC/Datasets/noaa.oisst.v2/sst.wkmean.1990-present.nc"
1)Integrate the oc with improved performance
2012-01-30 02:56:29 +08:00
F="http://motherlode.ucar.edu:8080/thredds/dodsC/station/metar/Surface_METAR_20111122_0000.nc"
CON="weather[0:10]"
- Fix NCF-158 to modify ncgen flag defaults. - Fix NCF-157 to modify DAP code to support partial variable retrieval. - Fix of NCF-154 to solve problem of ncgen improperly processing data lists for variables of size greater than 2**18 bytes. - Fix ncgen processing of char variables that have multiple unlimited dimensions. - Partly fix Jira issue: NCF-145 (vlen issues). - Benchmark program nc_test4/tst_ar4_*) requires arguments and should only be invoked inside a shell script; fixed so that they terminate cleanly if invoked with no arguments. - Fix the Doxygen processing so it will work with make distcheck. - Begin switchover to using an alternative to ncio. - Begin support for in-memory (diskless) files.
2012-03-15 07:26:48 +08:00
F="http://nomad1.ncep.noaa.gov:9090/dods/reanalyses/reanalysis-1/6hr/pgb/pgb"
VAR=hgtprs
Add quick check for Error {...} at start of the datadds data part
2013-02-08 06:14:57 +08:00
F="file://$TOP/ncdap_test/testdata3/$T"
#F="http://motherlode.ucar.edu:8081/dts/$T?f64"
#F="http://nomads.ncep.noaa.gov:9090/dods/gfs_hd/gfs_hd20120801/gfs_hd_00z"
#F="http://hycom.coaps.fsu.edu/thredds/dodsC/atl_ops"
#F="http://testbedapps-dev.sura.org/thredds/dodsC/auto/in.usf.fvcom.ike.ultralite.vardrag.nowave.2d"
#F="http://motherlode.ucar.edu:8081/dts/test.06"
#F="http://motherlode.ucar.edu:8081/thredds/dodsC/testdods/nametest3.nc"
#F="http://ingrid.ldeo.columbia.edu/SOURCES/.USTOPO/dods"
jira: NCF-232: bad conversion of grids
2013-02-26 12:31:06 +08:00
F="http://goldsmr2.sci.gsfc.nasa.gov/opendap/hyrax/MERRA/MAT1NXSLV.5.2.0/1990/01/MERRA100.prod.assim.tavg1_2d_slv_Nx.19900101.hdf"
CON="U50M_EOSGRID_Data_Fields[0:23][282:282][441:441]"
#F="http://motherlode.ucar.edu:9080/thredds/dodsC/grib/NCEP/NAM/CONUS_12km/best"
#CON="OneD.amp,TwoD.amp,ThreeD.amp"
completely rewritten constraint system
2011-11-14 12:20:19 +08:00
fi
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