netcdf-c/libdap4/CMakeLists.txt

# Copyright 1993, 1994, 1995, 1996, 1997, 1998, 1999, 2000, 2001, 2002,
# 2003, 2004, 2005, 2006, 2007, 2008, 2009, 2010, 2011, 2012, 2013, 2014,
# 2015, 2016, 2017, 2018
# University Corporation for Atmospheric Research/Unidata.

# See netcdf-c/COPYRIGHT file for more info.
SET(dap4_SOURCES d4curlfunctions.c d4fix.c d4data.c d4file.c d4parser.c d4meta.c d4varx.c d4dump.c d4swap.c d4chunk.c d4printer.c d4read.c d4http.c d4util.c d4odom.c d4cvt.c d4debug.c ncd4dispatch.c)

set_property(SOURCE d4meta.c
  PROPERTY
    SKIP_UNITY_BUILD_INCLUSION ON)

add_library(dap4 OBJECT ${dap4_SOURCES})

IF(STATUS_PARALLEL)
  target_link_libraries(dap4 PUBLIC MPI::MPI_C)
ENDIF(STATUS_PARALLEL)

###
# Options related to the man page generation.
###

###
# The C API man page.
###

set(man_MANS netcdf.3)

set(ARGS_MANPAGE -DAPI=C)

IF (USE_HDF5)
  SET(ARGS_MANPAGE ${ARGS_MANPAGE} -DNETCDF4=TRUE)
ENDIF(USE_HDF5)

IF (BUILD_DAP)
  SET(ARGS_MANPAGE ${ARGS_MANPAGE} -DDAP=TRUE)
ENDIF(BUILD_DAP)

IF (BUILD_PARALLEL)
  SET(ARGS_MANPAGE ${ARGS_MANPAGE} -DPARALLEL_IO=TRUE)
ENDIF(BUILD_PARALLEL)

FILE(GLOB CUR_EXTRA_DIST RELATIVE ${CMAKE_CURRENT_SOURCE_DIR} ${CMAKE_CURRENT_SOURCE_DIR}/*.c ${CMAKE_CURRENT_SOURCE_DIR}/*.h)
SET(CUR_EXTRA_DIST ${CUR_EXTRA_DIST} dce.y CMakeLists.txt Makefile.am)
ADD_EXTRA_DIST("${CUR_EXTRA_DIST}")
Updated copyright stanza in libdap4 2018-12-07 05:24:28 +08:00			`# Copyright 1993, 1994, 1995, 1996, 1997, 1998, 1999, 2000, 2001, 2002,`
			`# 2003, 2004, 2005, 2006, 2007, 2008, 2009, 2010, 2011, 2012, 2013, 2014,`
			`# 2015, 2016, 2017, 2018`
			`# University Corporation for Atmospheric Research/Unidata.`

			`# See netcdf-c/COPYRIGHT file for more info.`
Patch errors ## Examine and fix ezxml errors re: Issue https://github.com/Unidata/netcdf-c/issues/2119 Multiple security issues were found in ezxml (see above Issue). * CVE-2021-31598 * CVE-2021-31348 / CVE-2021-31347 * CVE-2021-31229 * CVE-2021-30485 * CVE-2021-26222 * CVE-2021-26221 * CVE-2021-26220 * CVE-2019-20202 * CVE-2019-20201 * CVE-2019-20200 * CVE-2019-20199 * CVE-2019-20198 * CVE-2019-20007 * CVE-2019-20006 * CVE-2019-20005 In addition, moved ezxml to libdispatch. ## Examine and fix selected oss-fuzz detected errors Note that most of these errors are in the libsrc .m4 generated code so fixing them is difficult. It would nice if we could tell oss-fuzz to skip those files. They are old and crufty and probably need a complete refactor. Issue\|Status -----\|------ 35382\|Fixed; old bug 35398\|Closed by OSS-Fuzz 35442\|Guarantee alloc > 0 or error; Old bug 35721\|Assert failure; ok 35992\|Fixed; old bug 36038\|Fixed; old bug 36129\|Unfixed; old bug 36229\|Fixed by adding assert; old bug 37476\|Unfixed; old bug 37824\|Assert Failure; ok 38300\|Closed by OSS-Fuzz 38537\|Unfixed; old bug 38658\|Unfixed; old bug 38699\|Fixed maybe; old bug 38772\|Nature of error is unclear, suspect that it results from using too large a type. 39248\|Need more information 39394\|Unfixed; old bug 2021-10-13 04:03:48 +08:00			`SET(dap4_SOURCES d4curlfunctions.c d4fix.c d4data.c d4file.c d4parser.c d4meta.c d4varx.c d4dump.c d4swap.c d4chunk.c d4printer.c d4read.c d4http.c d4util.c d4odom.c d4cvt.c d4debug.c ncd4dispatch.c)`
Primary change: add dap4 support Specific changes: 1. Add dap4 code: libdap4 and dap4_test. Note that until the d4ts server problem is solved, dap4 is turned off. 2. Modify various files to support dap4 flags: configure.ac, Makefile.am, CMakeLists.txt, etc. 3. Add nc_test/test_common.sh. This centralizes the handling of the locations of various things in the build tree: e.g. where is ncgen.exe located. See nc_test/test_common.sh for details. 4. Modify .sh files to use test_common.sh 5. Obsolete separate oc2 by moving it to be part of netcdf-c. This means replacing code with netcdf-c equivalents. 5. Add --with-testserver to configure.ac to allow override of the servers to be used for --enable-dap-remote-tests. 6. There were multiple versions of nctypealignment code. Try to centralize in libdispatch/doffset.c and include/ncoffsets.h 7. Add a unit test for the ncuri code because of its complexity. 8. Move the findserver code out of libdispatch and into a separate, self contained program in ncdap_test and dap4_test. 9. Move the dispatch header files (nc{3,4}dispatch.h) to .../include because they are now shared by modules. 10. Revamp the handling of TOPSRCDIR and TOPBUILDDIR for shell scripts. 11. Make use of MREMAP if available 12. Misc. minor changes e.g. - #include <config.h> -> #include "config.h" - Add some no-install headers to /include - extern -> EXTERNL and vice versa as needed - misc header cleanup - clean up checking for misc. unix vs microsoft functions 13. Change copyright decls in some files to point to LICENSE file. 14. Add notes to RELEASENOTES.md 2017-03-09 08:01:10 +08:00
CMake: Add support for UNITY_BUILD 2024-01-12 17:18:29 +08:00			`set_property(SOURCE d4meta.c`
			`PROPERTY`
			`SKIP_UNITY_BUILD_INCLUSION ON)`

Primary change: add dap4 support Specific changes: 1. Add dap4 code: libdap4 and dap4_test. Note that until the d4ts server problem is solved, dap4 is turned off. 2. Modify various files to support dap4 flags: configure.ac, Makefile.am, CMakeLists.txt, etc. 3. Add nc_test/test_common.sh. This centralizes the handling of the locations of various things in the build tree: e.g. where is ncgen.exe located. See nc_test/test_common.sh for details. 4. Modify .sh files to use test_common.sh 5. Obsolete separate oc2 by moving it to be part of netcdf-c. This means replacing code with netcdf-c equivalents. 5. Add --with-testserver to configure.ac to allow override of the servers to be used for --enable-dap-remote-tests. 6. There were multiple versions of nctypealignment code. Try to centralize in libdispatch/doffset.c and include/ncoffsets.h 7. Add a unit test for the ncuri code because of its complexity. 8. Move the findserver code out of libdispatch and into a separate, self contained program in ncdap_test and dap4_test. 9. Move the dispatch header files (nc{3,4}dispatch.h) to .../include because they are now shared by modules. 10. Revamp the handling of TOPSRCDIR and TOPBUILDDIR for shell scripts. 11. Make use of MREMAP if available 12. Misc. minor changes e.g. - #include <config.h> -> #include "config.h" - Add some no-install headers to /include - extern -> EXTERNL and vice versa as needed - misc header cleanup - clean up checking for misc. unix vs microsoft functions 13. Change copyright decls in some files to point to LICENSE file. 14. Add notes to RELEASENOTES.md 2017-03-09 08:01:10 +08:00			`add_library(dap4 OBJECT ${dap4_SOURCES})`

CMake: Ensure all libraries link against MPI if needed 2023-09-29 22:42:19 +08:00			`IF(STATUS_PARALLEL)`
			`target_link_libraries(dap4 PUBLIC MPI::MPI_C)`
			`ENDIF(STATUS_PARALLEL)`

Primary change: add dap4 support Specific changes: 1. Add dap4 code: libdap4 and dap4_test. Note that until the d4ts server problem is solved, dap4 is turned off. 2. Modify various files to support dap4 flags: configure.ac, Makefile.am, CMakeLists.txt, etc. 3. Add nc_test/test_common.sh. This centralizes the handling of the locations of various things in the build tree: e.g. where is ncgen.exe located. See nc_test/test_common.sh for details. 4. Modify .sh files to use test_common.sh 5. Obsolete separate oc2 by moving it to be part of netcdf-c. This means replacing code with netcdf-c equivalents. 5. Add --with-testserver to configure.ac to allow override of the servers to be used for --enable-dap-remote-tests. 6. There were multiple versions of nctypealignment code. Try to centralize in libdispatch/doffset.c and include/ncoffsets.h 7. Add a unit test for the ncuri code because of its complexity. 8. Move the findserver code out of libdispatch and into a separate, self contained program in ncdap_test and dap4_test. 9. Move the dispatch header files (nc{3,4}dispatch.h) to .../include because they are now shared by modules. 10. Revamp the handling of TOPSRCDIR and TOPBUILDDIR for shell scripts. 11. Make use of MREMAP if available 12. Misc. minor changes e.g. - #include <config.h> -> #include "config.h" - Add some no-install headers to /include - extern -> EXTERNL and vice versa as needed - misc header cleanup - clean up checking for misc. unix vs microsoft functions 13. Change copyright decls in some files to point to LICENSE file. 14. Add notes to RELEASENOTES.md 2017-03-09 08:01:10 +08:00			`###`
			`# Options related to the man page generation.`
			`###`

			`###`
			`# The C API man page.`
			`###`

			`set(man_MANS netcdf.3)`

			`set(ARGS_MANPAGE -DAPI=C)`

Fix nccopy -c dim/x to actually use the dim/x value. As it was, nccopy -c dim/x was sometimes being ignored. So modify nccopy to properly take into account. This also required a change to the nczarr code because it was not applying default chunking in the same way as libhdf5. Modify ncdump/tst_nccopy4.sh to test this feature properly. Also add a similar test to nczarr_test. Additionally, fix some other things that were causing Visual Studio builds with testing to not work. * fix curl testing under CMake to properly handle case where DAP is disabled, but byterange support is enabled. * properly test and/or define uintptr_t * Convert _O_XXX to O_XXX flags used by open(); 2020-09-02 03:44:24 +08:00			`IF (USE_HDF5)`
Primary change: add dap4 support Specific changes: 1. Add dap4 code: libdap4 and dap4_test. Note that until the d4ts server problem is solved, dap4 is turned off. 2. Modify various files to support dap4 flags: configure.ac, Makefile.am, CMakeLists.txt, etc. 3. Add nc_test/test_common.sh. This centralizes the handling of the locations of various things in the build tree: e.g. where is ncgen.exe located. See nc_test/test_common.sh for details. 4. Modify .sh files to use test_common.sh 5. Obsolete separate oc2 by moving it to be part of netcdf-c. This means replacing code with netcdf-c equivalents. 5. Add --with-testserver to configure.ac to allow override of the servers to be used for --enable-dap-remote-tests. 6. There were multiple versions of nctypealignment code. Try to centralize in libdispatch/doffset.c and include/ncoffsets.h 7. Add a unit test for the ncuri code because of its complexity. 8. Move the findserver code out of libdispatch and into a separate, self contained program in ncdap_test and dap4_test. 9. Move the dispatch header files (nc{3,4}dispatch.h) to .../include because they are now shared by modules. 10. Revamp the handling of TOPSRCDIR and TOPBUILDDIR for shell scripts. 11. Make use of MREMAP if available 12. Misc. minor changes e.g. - #include <config.h> -> #include "config.h" - Add some no-install headers to /include - extern -> EXTERNL and vice versa as needed - misc header cleanup - clean up checking for misc. unix vs microsoft functions 13. Change copyright decls in some files to point to LICENSE file. 14. Add notes to RELEASENOTES.md 2017-03-09 08:01:10 +08:00			`SET(ARGS_MANPAGE ${ARGS_MANPAGE} -DNETCDF4=TRUE)`
Revert "Revert "Fix nczarr-experimental: improve build support, disengage hdf5 vs netcdf4 flags, and find AWS libraries"" 2020-08-18 09:15:47 +08:00			`ENDIF(USE_HDF5)`
Primary change: add dap4 support Specific changes: 1. Add dap4 code: libdap4 and dap4_test. Note that until the d4ts server problem is solved, dap4 is turned off. 2. Modify various files to support dap4 flags: configure.ac, Makefile.am, CMakeLists.txt, etc. 3. Add nc_test/test_common.sh. This centralizes the handling of the locations of various things in the build tree: e.g. where is ncgen.exe located. See nc_test/test_common.sh for details. 4. Modify .sh files to use test_common.sh 5. Obsolete separate oc2 by moving it to be part of netcdf-c. This means replacing code with netcdf-c equivalents. 5. Add --with-testserver to configure.ac to allow override of the servers to be used for --enable-dap-remote-tests. 6. There were multiple versions of nctypealignment code. Try to centralize in libdispatch/doffset.c and include/ncoffsets.h 7. Add a unit test for the ncuri code because of its complexity. 8. Move the findserver code out of libdispatch and into a separate, self contained program in ncdap_test and dap4_test. 9. Move the dispatch header files (nc{3,4}dispatch.h) to .../include because they are now shared by modules. 10. Revamp the handling of TOPSRCDIR and TOPBUILDDIR for shell scripts. 11. Make use of MREMAP if available 12. Misc. minor changes e.g. - #include <config.h> -> #include "config.h" - Add some no-install headers to /include - extern -> EXTERNL and vice versa as needed - misc header cleanup - clean up checking for misc. unix vs microsoft functions 13. Change copyright decls in some files to point to LICENSE file. 14. Add notes to RELEASENOTES.md 2017-03-09 08:01:10 +08:00
			`IF (BUILD_DAP)`
			`SET(ARGS_MANPAGE ${ARGS_MANPAGE} -DDAP=TRUE)`
			`ENDIF(BUILD_DAP)`

			`IF (BUILD_PARALLEL)`
			`SET(ARGS_MANPAGE ${ARGS_MANPAGE} -DPARALLEL_IO=TRUE)`
			`ENDIF(BUILD_PARALLEL)`

			`FILE(GLOB CUR_EXTRA_DIST RELATIVE ${CMAKE_CURRENT_SOURCE_DIR} ${CMAKE_CURRENT_SOURCE_DIR}/.c ${CMAKE_CURRENT_SOURCE_DIR}/.h)`
			`SET(CUR_EXTRA_DIST ${CUR_EXTRA_DIST} dce.y CMakeLists.txt Makefile.am)`
			`ADD_EXTRA_DIST("${CUR_EXTRA_DIST}")`