netcdf-c/ncdap_test/test_partvar.c

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/*
Test part variable fetch code
*/
#include <stdlib.h>
#include <stdio.h>
#include <string.h>
Primary change: add dap4 support Specific changes: 1. Add dap4 code: libdap4 and dap4_test. Note that until the d4ts server problem is solved, dap4 is turned off. 2. Modify various files to support dap4 flags: configure.ac, Makefile.am, CMakeLists.txt, etc. 3. Add nc_test/test_common.sh. This centralizes the handling of the locations of various things in the build tree: e.g. where is ncgen.exe located. See nc_test/test_common.sh for details. 4. Modify .sh files to use test_common.sh 5. Obsolete separate oc2 by moving it to be part of netcdf-c. This means replacing code with netcdf-c equivalents. 5. Add --with-testserver to configure.ac to allow override of the servers to be used for --enable-dap-remote-tests. 6. There were multiple versions of nctypealignment code. Try to centralize in libdispatch/doffset.c and include/ncoffsets.h 7. Add a unit test for the ncuri code because of its complexity. 8. Move the findserver code out of libdispatch and into a separate, self contained program in ncdap_test and dap4_test. 9. Move the dispatch header files (nc{3,4}dispatch.h) to .../include because they are now shared by modules. 10. Revamp the handling of TOPSRCDIR and TOPBUILDDIR for shell scripts. 11. Make use of MREMAP if available 12. Misc. minor changes e.g. - #include <config.h> -> #include "config.h" - Add some no-install headers to /include - extern -> EXTERNL and vice versa as needed - misc header cleanup - clean up checking for misc. unix vs microsoft functions 13. Change copyright decls in some files to point to LICENSE file. 14. Add notes to RELEASENOTES.md
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#include "netcdf.h"
#include "ncdispatch.h"
#include "nctestserver.h"
/* The DDS in netcdf classic form is as follows:
netcdf ingrid {
dimensions:
ISTA = 35 ;
IZ = 44 ;
variables:
int ISTA(ISTA) ;
float IZ(IZ) ;
float v3H(ISTA, IZ) ;
}
*/
#define PARAMS ""
#define DTSTEST "/ingrid"
#define VAR "v3H"
#define ISTA 35
#define IZ 44
#define RANK 2
/* Define the delta for float equality */
#define DELTA 0.005
#define ERRCODE 2
#define ERR(e) {printf("Error: %s\n", nc_strerror(e)); exit(ERRCODE);}
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#undef DEBUG
/* Setup an odometer */
typedef struct Odom {
int rank;
size_t* index;
size_t* stop;
size_t* start;
size_t* count;
} Odom;
#if 0
static float targetwhole[ISTA*IZ];
#endif
static float targetpart[ISTA*IZ];
static float target_content[ISTA*IZ];
static Odom* odom_create(int rank);
static void odom_reclaim(Odom* odom);
static void odom_set(Odom* odom, size_t* start, size_t* count);
static int odom_more(Odom* odom);
static int odom_incr(Odom* odom);
static size_t odom_count(Odom* odom);
static size_t subslice(int rank, size_t* count, int startdim);
static int check(float*, size_t* start, size_t* count);
/* Define whole variable start/count */
static size_t start0[RANK] = {0,0};
static size_t count0[RANK] = {ISTA,IZ};
static int
floateq(float f1, float f2)
{
float diff = f1 - f2;
if(diff >= 0 && diff < DELTA) return 1;
if(diff < 0 && diff > -DELTA) return 1;
return 0;
}
void dump(float* source, size_t start, size_t count)
{
#ifdef DEBUG
int i;
printf("start=%lu count=%lu\n",(unsigned long)start,(unsigned long)count);
for(i=0;i<count;i++) {
printf(" %g",source[start+i]);
if((i % 6) == 5) printf("\n");
}
printf("\n");
#endif
}
int
main()
{
int ncid, varid;
int retval;
size_t start[RANK];
size_t count[RANK];
size_t offset;
char url[4096];
char* svc = NULL;
/* Find Test Server */
Primary change: add dap4 support Specific changes: 1. Add dap4 code: libdap4 and dap4_test. Note that until the d4ts server problem is solved, dap4 is turned off. 2. Modify various files to support dap4 flags: configure.ac, Makefile.am, CMakeLists.txt, etc. 3. Add nc_test/test_common.sh. This centralizes the handling of the locations of various things in the build tree: e.g. where is ncgen.exe located. See nc_test/test_common.sh for details. 4. Modify .sh files to use test_common.sh 5. Obsolete separate oc2 by moving it to be part of netcdf-c. This means replacing code with netcdf-c equivalents. 5. Add --with-testserver to configure.ac to allow override of the servers to be used for --enable-dap-remote-tests. 6. There were multiple versions of nctypealignment code. Try to centralize in libdispatch/doffset.c and include/ncoffsets.h 7. Add a unit test for the ncuri code because of its complexity. 8. Move the findserver code out of libdispatch and into a separate, self contained program in ncdap_test and dap4_test. 9. Move the dispatch header files (nc{3,4}dispatch.h) to .../include because they are now shared by modules. 10. Revamp the handling of TOPSRCDIR and TOPBUILDDIR for shell scripts. 11. Make use of MREMAP if available 12. Misc. minor changes e.g. - #include <config.h> -> #include "config.h" - Add some no-install headers to /include - extern -> EXTERNL and vice versa as needed - misc header cleanup - clean up checking for misc. unix vs microsoft functions 13. Change copyright decls in some files to point to LICENSE file. 14. Add notes to RELEASENOTES.md
2017-03-09 08:01:10 +08:00
svc = nc_findtestserver("dts",0,REMOTETESTSERVERS);
if(svc == NULL) {
fprintf(stderr,"Cannot locate test server\n");
exit(0);
}
strncpy(url,PARAMS,sizeof(url));
strlcat(url,svc,sizeof(url));
strlcat(url,DTSTEST,sizeof(url));
free(svc);
printf("test_partvar: url=%s\n",url);
if((retval = nc_open(url, NC_NOWRITE, &ncid)))
ERR(retval);
if((retval = nc_inq_varid(ncid, VAR, &varid)))
ERR(retval);
/* read piece by piece */
memcpy(start,start0,sizeof(start0));
memcpy(count,count0,sizeof(count0));
count[0] = 1;
memset((void*)targetpart,0,sizeof(targetpart));
for(offset=0;start[0] < count0[0];start[0]++) {
size_t nslice;
float* fpos = (float*)targetpart;
fpos += offset;
if((retval = nc_get_vara_float(ncid,varid,start,count,fpos)))
ERR(retval);
nslice = subslice(RANK,count,1);
offset += nslice;
}
#ifdef DEBUG
dump((float*)targetpart,0,ISTA*IZ);
#endif
/* validate the part var */
if(!check(targetpart,start0,count0)) goto fail;
if((retval = nc_close(ncid)))
ERR(retval);
printf("*** PASS\n");
return 0;
fail:
printf("*** FAIL\n");
return 1;
}
static size_t
subslice(int rank, size_t* count, int startdim)
{
int i;
size_t offset = 1;
for(i=startdim;i<rank;i++)
offset *= count[i];
return offset;
}
static int
check(float* target, size_t* start, size_t* count)
{
int ok = 1;
Odom* odom = odom_create(RANK);
float* result = (float*)target;
float* expected = (float*)target_content;
odom_set(odom,start,count);
while(odom_more(odom)) {
size_t offset = odom_count(odom);
int eq = floateq(result[offset],expected[offset]);
if(eq == 0) {
fprintf(stderr,"fail: result[%lu] = %f ; expected[%lu] = %f\n",
2016-04-07 04:05:58 +08:00
(unsigned long)offset,result[offset],(unsigned long)offset,expected[offset]);
ok=0;
}
odom_incr(odom);
}
odom_reclaim(odom);
return ok;
}
static Odom*
odom_create(int rank)
{
Odom* odom = (Odom*)malloc(sizeof(Odom));
/* Init the odometer */
odom->rank = rank;
odom->index = (size_t*)calloc(sizeof(size_t)*rank,1);
odom->stop = (size_t*)calloc(sizeof(size_t)*rank,1);
odom->start = (size_t*)calloc(sizeof(size_t)*rank,1);
odom->count = (size_t*)calloc(sizeof(size_t)*rank,1);
return odom;
}
static void
odom_reclaim(Odom* odom)
{
free(odom->index);
free(odom->stop);
free(odom->start);
free(odom->count);
free(odom);
}
static void
odom_set(Odom* odom, size_t* start, size_t* count)
{
int i;
/* Init the odometer */
for(i=0;i<odom->rank;i++) {
odom->start[i] = start[i];
odom->count[i] = count[i];
}
for(i=0;i<odom->rank;i++) {
odom->index[i] = odom->start[i];
odom->stop[i] = odom->start[i] + odom->count[i];
}
}
static int
odom_more(Odom* odom)
{
return (odom->index[0] < odom->stop[0]?1:0);
}
static int
odom_incr(Odom* odom)
{
int i; /* do not make unsigned */
if(odom->rank == 0) return 0;
for(i=odom->rank-1;i>=0;i--) {
odom->index[i]++;
if(odom->index[i] < odom->stop[i]) break;
if(i == 0) return 0; /* leave the 0th entry if it overflows*/
odom->index[i] = odom->start[i]; /* reset this position*/
}
return 1;
}
/* Convert current dapodometer settings to a single integer count*/
static size_t
odom_count(Odom* odom)
{
int i;
size_t offset = 0;
for(i=0;i<odom->rank;i++) {
offset *= odom->count[i];
offset += odom->index[i];
}
return offset;
}
/* Capture the complete set of data */
static float target_content[ISTA*IZ] = {
0, 0.009999833, 0.01999867, 0.0299955, 0.03998933, 0.04997917, 0.059964,
0.06994285, 0.0799147, 0.08987855, 0.09983341, 0.1097783, 0.1197122,
0.1296341, 0.1395431, 0.1494381, 0.1593182, 0.1691823, 0.1790296,
0.1888589, 0.1986693, 0.2084599, 0.2182296, 0.2279775, 0.2377026,
0.247404, 0.2570806, 0.2667314, 0.2763557, 0.2859522, 0.2955202,
0.3050586, 0.3145666, 0.324043, 0.3334871, 0.3428978, 0.3522742,
0.3616154, 0.3709205, 0.3801884, 0.3894183, 0.3986093, 0.4077604,
0.4168708,
0.4259395, 0.4349655, 0.4439481, 0.4528863, 0.4617792, 0.4706259,
0.4794255, 0.4881772, 0.4968801, 0.5055333, 0.514136, 0.5226873,
0.5311862, 0.539632, 0.5480239, 0.556361, 0.5646425, 0.5728675,
0.5810351, 0.5891448, 0.5971954, 0.6051864, 0.6131169, 0.620986,
0.628793, 0.6365372, 0.6442177, 0.6518338, 0.6593847, 0.6668696,
0.6742879, 0.6816388, 0.6889215, 0.6961352, 0.7032794, 0.7103533,
0.7173561, 0.7242872, 0.7311459, 0.7379314, 0.7446431, 0.7512804,
0.7578425, 0.764329,
0.7707389, 0.7770718, 0.7833269, 0.7895038, 0.7956016, 0.8016199,
0.8075581, 0.8134155, 0.8191916, 0.8248857, 0.8304974, 0.836026,
0.841471, 0.8468319, 0.852108, 0.857299, 0.8624042, 0.8674232, 0.8723555,
0.8772005, 0.8819578, 0.8866269, 0.8912073, 0.8956987, 0.9001005,
0.9044122, 0.9086335, 0.912764, 0.9168031, 0.9207506, 0.924606, 0.928369,
0.9320391, 0.935616, 0.9390994, 0.9424888, 0.945784, 0.9489846,
0.9520903, 0.9551008, 0.9580159, 0.960835, 0.9635582, 0.966185,
0.9687151, 0.9711484, 0.9734845, 0.9757234, 0.9778646, 0.979908, 0.9818535,
0.9837008, 0.9854497, 0.9871001, 0.9886518, 0.9901046, 0.9914584,
0.992713, 0.9938684, 0.9949244, 0.9958808, 0.9967378, 0.997495,
0.9981525, 0.9987102, 0.9991679, 0.9995258, 0.9997838, 0.9999417,
0.9999997, 0.9999576, 0.9998156, 0.9995736, 0.9992316, 0.9987897,
0.998248, 0.9976064, 0.996865, 0.996024, 0.9950833, 0.9940432, 0.9929036,
0.9916648, 0.9903268, 0.9888898, 0.9873539, 0.9857192, 0.983986,
0.9821543, 0.9802245, 0.9781966, 0.9760709, 0.9738476, 0.971527, 0.9691091,
0.9665944, 0.963983, 0.9612752, 0.9584713, 0.9555715, 0.9525762,
0.9494856, 0.9463001, 0.9430199, 0.9396455, 0.9361771, 0.932615,
0.9289597, 0.9252115, 0.9213708, 0.917438, 0.9134133, 0.9092974,
0.9050906, 0.9007932, 0.8964058, 0.8919287, 0.8873624, 0.8827074,
0.8779641, 0.873133, 0.8682146, 0.8632094, 0.8581178, 0.8529405,
0.8476778, 0.8423305, 0.8368988, 0.8313835, 0.825785, 0.8201039, 0.8143409,
0.8084964, 0.8025711, 0.7965655, 0.7904802, 0.7843159, 0.7780732,
0.7717527, 0.7653549, 0.7588807, 0.7523306, 0.7457052, 0.7390053,
0.7322314, 0.7253844, 0.7184648, 0.7114733, 0.7044108, 0.6972777,
0.690075, 0.6828032, 0.6754632, 0.6680556, 0.6605812, 0.6530408,
0.645435, 0.6377647, 0.6300306, 0.6222336, 0.6143743, 0.6064535,
0.5984721, 0.5904309, 0.5823306, 0.5741721, 0.5659562, 0.5576837,
0.5493554, 0.5409722, 0.5325349, 0.5240443, 0.5155014, 0.5069069,
0.4982616, 0.4895666,
0.4808226, 0.4720306, 0.4631913, 0.4543057, 0.4453746, 0.4363991,
0.4273799, 0.4183179, 0.4092142, 0.4000695, 0.3908848, 0.381661,
0.372399, 0.3630998, 0.3537644, 0.3443935, 0.3349881, 0.3255493,
0.316078, 0.306575, 0.2970414, 0.287478, 0.2778859, 0.2682661, 0.2586193,
0.2489468, 0.2392493, 0.229528, 0.2197836, 0.2100173, 0.20023, 0.1904227,
0.1805963, 0.1707518, 0.1608903, 0.1510127, 0.14112, 0.1312132,
0.1212933, 0.1113612, 0.101418, 0.09146464, 0.08150215, 0.07153151,
0.06155372, 0.05156977, 0.04158066, 0.0315874, 0.02159098, 0.01159239,
0.001592653, -0.008407247, -0.01840631, -0.02840353, -0.0383979,
-0.04838844, -0.05837414, -0.068354, -0.07832703, -0.08829223,
-0.09824859, -0.1081951, -0.1181309, -0.1280548, -0.1379659, -0.1478632,
-0.1577457, -0.1676124, -0.1774624, -0.1872947, -0.1971082, -0.206902,
-0.2166751, -0.2264265, -0.2361553, -0.2458605, -0.2555411, -0.2651961,
-0.2748247, -0.2844257, -0.2939983, -0.3035415, -0.3130544, -0.3225359,
-0.3319852, -0.3414013, -0.3507832, -0.3601301,
-0.369441, -0.3787149, -0.3879509, -0.3971482, -0.4063057, -0.4154226,
-0.424498, -0.4335309, -0.4425204, -0.4514658, -0.4603659, -0.46922,
-0.4780273, -0.4867867, -0.4954974, -0.5041586, -0.5127693, -0.5213288,
-0.5298361, -0.5382905, -0.5466911, -0.5550369, -0.5633273, -0.5715613,
-0.5797382, -0.5878571, -0.5959172, -0.6039178, -0.6118579, -0.6197369,
-0.6275538, -0.635308, -0.6429988, -0.6506251, -0.6581865, -0.665682,
-0.673111, -0.6804726, -0.6877661, -0.694991, -0.7021463, -0.7092314,
-0.7162456, -0.7231881,
-0.7300584, -0.7368556, -0.7435791, -0.7502283, -0.7568025, -0.763301,
-0.7697231, -0.7760683, -0.7823359, -0.7885253, -0.7946358, -0.8006668,
-0.8066177, -0.8124881, -0.8182771, -0.8239843, -0.8296092, -0.835151,
-0.8406094, -0.8459837, -0.8512734, -0.856478, -0.8615969, -0.8666297,
-0.8715758, -0.8764347, -0.881206, -0.8858892, -0.8904838, -0.8949894,
-0.8994054, -0.9037315, -0.9079673, -0.9121122, -0.9161659, -0.920128,
-0.9239982, -0.9277759, -0.9314608, -0.9350526, -0.9385508, -0.9419553,
-0.9452655, -0.9484812,
-0.9516021, -0.9546278, -0.957558, -0.9603925, -0.963131, -0.965773,
-0.9683186, -0.9707673, -0.973119, -0.9753733, -0.9775301, -0.9795892,
-0.9815503, -0.9834132, -0.9851778, -0.9868439, -0.9884112, -0.9898798,
-0.9912494, -0.9925198, -0.993691, -0.9947628, -0.9957352, -0.996608,
-0.9973811, -0.9980544, -0.998628, -0.9991017, -0.9994755, -0.9997494,
-0.9999232, -0.9999971, -0.999971, -0.9998449, -0.9996188, -0.9992928,
-0.9988668, -0.998341, -0.9977152, -0.9969898, -0.9961646, -0.9952399,
-0.9942155, -0.9930918,
-0.9918687, -0.9905465, -0.9891253, -0.9876051, -0.9859861, -0.9842686,
-0.9824526, -0.9805384, -0.9785261, -0.976416, -0.9742082, -0.9719031,
-0.9695007, -0.9670014, -0.9644054, -0.9617129, -0.9589243, -0.9560397,
-0.9530596, -0.9499842, -0.9468138, -0.9435487, -0.9401892, -0.9367357,
-0.9331886, -0.9295481, -0.9258147, -0.9219887, -0.9180705, -0.9140605,
-0.9099591, -0.9057667, -0.9014837, -0.8971105, -0.8926477, -0.8880956,
-0.8834547, -0.8787254, -0.8739083, -0.8690037, -0.8640123, -0.8589345,
-0.8537708, -0.8485217,
-0.8431877, -0.8377695, -0.8322675, -0.8266822, -0.8210142, -0.8152642,
-0.8094327, -0.8035201, -0.7975273, -0.7914547, -0.7853029, -0.7790727,
-0.7727645, -0.766379, -0.7599169, -0.7533789, -0.7467654, -0.7400773,
-0.7333152, -0.7264798, -0.7195717, -0.7125916, -0.7055403, -0.6984185,
-0.6912268, -0.683966, -0.6766368, -0.6692399, -0.6617761, -0.6542461,
-0.6466507, -0.6389906, -0.6312667, -0.6234795, -0.6156301, -0.6077191,
-0.5997473, -0.5917156, -0.5836247, -0.5754754, -0.5672686, -0.559005,
-0.5506855, -0.542311,
-0.5338823, -0.5254001, -0.5168654, -0.5082791, -0.4996419, -0.4909547,
-0.4822185, -0.473434, -0.4646022, -0.4557239, -0.4468001, -0.4378315,
-0.4288192, -0.419764, -0.4106669, -0.4015286, -0.3923502, -0.3831326,
-0.3738767, -0.3645833, -0.3552535, -0.3458883, -0.3364884, -0.3270548,
-0.3175886, -0.3080906, -0.2985618, -0.2890031, -0.2794155, -0.2698,
-0.2601575, -0.250489, -0.2407954, -0.2310778, -0.2213371, -0.2115742,
-0.2017901, -0.1919859, -0.1821625, -0.1723209, -0.162462, -0.1525869,
-0.1426965, -0.1327919,
-0.122874, -0.1129438, -0.1030023, -0.0930505, -0.0830894, -0.07311999,
-0.06314328, -0.05316024, -0.04317189, -0.03317922, -0.02318323,
-0.01318493, -0.003185302, 0.00681464, 0.0168139, 0.02681148, 0.03680638,
0.0467976, 0.05678413, 0.06676499, 0.07673918, 0.08670568, 0.09666352,
0.1066117, 0.1165492, 0.1264751, 0.1363883, 0.1462878, 0.1561728,
0.1660421, 0.1758948, 0.18573, 0.1955465, 0.2053435, 0.21512, 0.2248749,
0.2346074, 0.2443164, 0.254001, 0.2636602, 0.273293, 0.2828985,
0.2924757, 0.3020236,
0.3115413, 0.321028, 0.3304825, 0.3399039, 0.3492913, 0.3586439, 0.3679605,
0.3772404, 0.3864825, 0.395686, 0.4048499, 0.4139734, 0.4230554,
0.4320951, 0.4410917, 0.4500441, 0.4589515, 0.467813, 0.4766277,
0.4853948, 0.4941134, 0.5027825, 0.5114013, 0.519969, 0.5284848,
0.5369476, 0.5453568, 0.5537114, 0.5620106, 0.5702537, 0.5784398,
0.5865679, 0.5946375, 0.6026475, 0.6105974, 0.6184861, 0.626313,
0.6340773, 0.6417782, 0.6494148, 0.6569866, 0.6644927, 0.6719322,
0.6793047,
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