netcdf-c/libdispatch/nclog.c

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/*********************************************************************
* Copyright 2018, UCAR/Unidata
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* See netcdf/COPYRIGHT file for copying and redistribution conditions.
* $Header$
*********************************************************************/
#include "config.h"
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#ifdef _MSC_VER
#include<io.h>
#endif
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#include <stdlib.h>
#include <stdio.h>
#include <stdarg.h>
#include <string.h>
#include <errno.h>
Primary change: add dap4 support Specific changes: 1. Add dap4 code: libdap4 and dap4_test. Note that until the d4ts server problem is solved, dap4 is turned off. 2. Modify various files to support dap4 flags: configure.ac, Makefile.am, CMakeLists.txt, etc. 3. Add nc_test/test_common.sh. This centralizes the handling of the locations of various things in the build tree: e.g. where is ncgen.exe located. See nc_test/test_common.sh for details. 4. Modify .sh files to use test_common.sh 5. Obsolete separate oc2 by moving it to be part of netcdf-c. This means replacing code with netcdf-c equivalents. 5. Add --with-testserver to configure.ac to allow override of the servers to be used for --enable-dap-remote-tests. 6. There were multiple versions of nctypealignment code. Try to centralize in libdispatch/doffset.c and include/ncoffsets.h 7. Add a unit test for the ncuri code because of its complexity. 8. Move the findserver code out of libdispatch and into a separate, self contained program in ncdap_test and dap4_test. 9. Move the dispatch header files (nc{3,4}dispatch.h) to .../include because they are now shared by modules. 10. Revamp the handling of TOPSRCDIR and TOPBUILDDIR for shell scripts. 11. Make use of MREMAP if available 12. Misc. minor changes e.g. - #include <config.h> -> #include "config.h" - Add some no-install headers to /include - extern -> EXTERNL and vice versa as needed - misc header cleanup - clean up checking for misc. unix vs microsoft functions 13. Change copyright decls in some files to point to LICENSE file. 14. Add notes to RELEASENOTES.md
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#ifdef HAVE_FCNTL_H
#include <fcntl.h>
#endif
#ifdef HAVE_UNISTD_H
#include <unistd.h>
#endif
#ifdef HAVE_EXECINFO_H
#include <execinfo.h>
#endif
#include "netcdf.h"
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#include "nclog.h"
#define PREFIXLEN 8
#define MAXTAGS 256
#define NCTAGDFALT "Log";
#define NC_MAX_FRAMES 256
static int nclogginginitialized = 0;
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static struct NCLOGGLOBAL {
int nclogging;
int tracelevel;
FILE* nclogstream;
int depth;
struct Frame {
const char* fcn;
int level;
int depth;
} frames[NC_MAX_FRAMES];
} nclog_global = {0,-1,NULL};
This PR adds EXPERIMENTAL support for accessing data in the cloud using a variant of the Zarr protocol and storage format. This enhancement is generically referred to as "NCZarr". The data model supported by NCZarr is netcdf-4 minus the user-defined types and the String type. In this sense it is similar to the CDF-5 data model. More detailed information about enabling and using NCZarr is described in the document NUG/nczarr.md and in a [Unidata Developer's blog entry](https://www.unidata.ucar.edu/blogs/developer/en/entry/overview-of-zarr-support-in). WARNING: this code has had limited testing, so do use this version for production work. Also, performance improvements are ongoing. Note especially the following platform matrix of successful tests: Platform | Build System | S3 support ------------------------------------ Linux+gcc | Automake | yes Linux+gcc | CMake | yes Visual Studio | CMake | no Additionally, and as a consequence of the addition of NCZarr, major changes have been made to the Filter API. NOTE: NCZarr does not yet support filters, but these changes are enablers for that support in the future. Note that it is possible (probable?) that there will be some accidental reversions if the changes here did not correctly mimic the existing filter testing. In any case, previously filter ids and parameters were of type unsigned int. In order to support the more general zarr filter model, this was all converted to char*. The old HDF5-specific, unsigned int operations are still supported but they are wrappers around the new, char* based nc_filterx_XXX functions. This entailed at least the following changes: 1. Added the files libdispatch/dfilterx.c and include/ncfilter.h 2. Some filterx utilities have been moved to libdispatch/daux.c 3. A new entry, "filter_actions" was added to the NCDispatch table and the version bumped. 4. An overly complex set of structs was created to support funnelling all of the filterx operations thru a single dispatch "filter_actions" entry. 5. Move common code to from libhdf5 to libsrc4 so that it is accessible to nczarr. Changes directly related to Zarr: 1. Modified CMakeList.txt and configure.ac to support both C and C++ -- this is in support of S3 support via the awd-sdk libraries. 2. Define a size64_t type to support nczarr. 3. More reworking of libdispatch/dinfermodel.c to support zarr and to regularize the structure of the fragments section of a URL. Changes not directly related to Zarr: 1. Make client-side filter registration be conditional, with default off. 2. Hack include/nc4internal.h to make some flags added by Ed be unique: e.g. NC_CREAT, NC_INDEF, etc. 3. cleanup include/nchttp.h and libdispatch/dhttp.c. 4. Misc. changes to support compiling under Visual Studio including: * Better testing under windows for dirent.h and opendir and closedir. 5. Misc. changes to the oc2 code to support various libcurl CURLOPT flags and to centralize error reporting. 6. By default, suppress the vlen tests that have unfixed memory leaks; add option to enable them. 7. Make part of the nc_test/test_byterange.sh test be contingent on remotetest.unidata.ucar.edu being accessible. Changes Left TO-DO: 1. fix provenance code, it is too HDF5 specific.
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static const char* nctagset[] = {"Note","Warning","Error","Debug"};
static const int nctagsize = sizeof(nctagset)/sizeof(char*);
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/* Forward */
static const char* nctagname(int tag);
/*!\defgroup NClog NClog Management
@{*/
/*!\internal
*/
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void
ncloginit(void)
{
const char* envv = NULL;
if(nclogginginitialized)
return;
nclogginginitialized = 1;
memset(&nclog_global,0,sizeof(nclog_global));
nclog_global.tracelevel = -1;
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ncsetlogging(0);
nclog_global.nclogstream = stderr;
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/* Use environment variables to preset nclogging state*/
/* I hope this is portable*/
envv = getenv(NCENVLOGGING);
if(envv != NULL) {
This PR adds EXPERIMENTAL support for accessing data in the cloud using a variant of the Zarr protocol and storage format. This enhancement is generically referred to as "NCZarr". The data model supported by NCZarr is netcdf-4 minus the user-defined types and the String type. In this sense it is similar to the CDF-5 data model. More detailed information about enabling and using NCZarr is described in the document NUG/nczarr.md and in a [Unidata Developer's blog entry](https://www.unidata.ucar.edu/blogs/developer/en/entry/overview-of-zarr-support-in). WARNING: this code has had limited testing, so do use this version for production work. Also, performance improvements are ongoing. Note especially the following platform matrix of successful tests: Platform | Build System | S3 support ------------------------------------ Linux+gcc | Automake | yes Linux+gcc | CMake | yes Visual Studio | CMake | no Additionally, and as a consequence of the addition of NCZarr, major changes have been made to the Filter API. NOTE: NCZarr does not yet support filters, but these changes are enablers for that support in the future. Note that it is possible (probable?) that there will be some accidental reversions if the changes here did not correctly mimic the existing filter testing. In any case, previously filter ids and parameters were of type unsigned int. In order to support the more general zarr filter model, this was all converted to char*. The old HDF5-specific, unsigned int operations are still supported but they are wrappers around the new, char* based nc_filterx_XXX functions. This entailed at least the following changes: 1. Added the files libdispatch/dfilterx.c and include/ncfilter.h 2. Some filterx utilities have been moved to libdispatch/daux.c 3. A new entry, "filter_actions" was added to the NCDispatch table and the version bumped. 4. An overly complex set of structs was created to support funnelling all of the filterx operations thru a single dispatch "filter_actions" entry. 5. Move common code to from libhdf5 to libsrc4 so that it is accessible to nczarr. Changes directly related to Zarr: 1. Modified CMakeList.txt and configure.ac to support both C and C++ -- this is in support of S3 support via the awd-sdk libraries. 2. Define a size64_t type to support nczarr. 3. More reworking of libdispatch/dinfermodel.c to support zarr and to regularize the structure of the fragments section of a URL. Changes not directly related to Zarr: 1. Make client-side filter registration be conditional, with default off. 2. Hack include/nc4internal.h to make some flags added by Ed be unique: e.g. NC_CREAT, NC_INDEF, etc. 3. cleanup include/nchttp.h and libdispatch/dhttp.c. 4. Misc. changes to support compiling under Visual Studio including: * Better testing under windows for dirent.h and opendir and closedir. 5. Misc. changes to the oc2 code to support various libcurl CURLOPT flags and to centralize error reporting. 6. By default, suppress the vlen tests that have unfixed memory leaks; add option to enable them. 7. Make part of the nc_test/test_byterange.sh test be contingent on remotetest.unidata.ucar.edu being accessible. Changes Left TO-DO: 1. fix provenance code, it is too HDF5 specific.
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ncsetlogging(1);
}
envv = getenv(NCENVTRACING);
if(envv != NULL) {
nctracelevel(atoi(envv));
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}
}
/*!
Enable/Disable logging.
\param[in] tf If 1, then turn on logging, if 0, then turn off logging.
\return The previous value of the logging flag.
*/
int
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ncsetlogging(int tf)
{
int was;
if(!nclogginginitialized) ncloginit();
was = nclog_global.nclogging;
nclog_global.nclogging = tf;
if(nclog_global.nclogstream == NULL) nclogopen(NULL);
return was;
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}
int
nclogopen(FILE* stream)
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{
if(!nclogginginitialized) ncloginit();
if(stream == NULL) stream = stderr;
nclog_global.nclogstream = stream;
return 1;
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}
/*!
Send logging messages. This uses a variable
number of arguments and operates like the stdio
printf function.
\param[in] tag Indicate the kind of this log message.
\param[in] format Format specification as with printf.
*/
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void
nclog(int tag, const char* fmt, ...)
{
if(fmt != NULL) {
va_list args;
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va_start(args, fmt);
ncvlog(tag,fmt,args);
va_end(args);
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}
}
int
ncvlog(int tag, const char* fmt, va_list ap)
{
const char* prefix;
int was = -1;
if(!nclogginginitialized) ncloginit();
if(tag == NCLOGERR) was = ncsetlogging(1);
if(!nclog_global.nclogging || nclog_global.nclogstream == NULL) return was;
prefix = nctagname(tag);
fprintf(nclog_global.nclogstream,"%s:",prefix);
if(fmt != NULL) {
vfprintf(nclog_global.nclogstream, fmt, ap);
}
fprintf(nclog_global.nclogstream, "\n" );
fflush(nclog_global.nclogstream);
return was;
}
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void
nclogtext(int tag, const char* text)
{
nclogtextn(tag,text,strlen(text));
}
/*!
Send arbitrarily long text as a logging message.
Each line will be sent using nclog with the specified tag.
\param[in] tag Indicate the kind of this log message.
\param[in] text Arbitrary text to send as a logging message.
*/
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void
nclogtextn(int tag, const char* text, size_t count)
{
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NC_UNUSED(tag);
if(!nclog_global.nclogging || nclog_global.nclogstream == NULL) return;
fwrite(text,1,count,nclog_global.nclogstream);
fflush(nclog_global.nclogstream);
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}
static const char*
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nctagname(int tag)
{
if(tag < 0 || tag >= nctagsize)
return "unknown";
return nctagset[tag];
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}
/*!
Send trace messages.
\param[in] level Indicate the level of trace
\param[in] format Format specification as with printf.
*/
int
nctracelevel(int level)
{
int oldlevel;
if(!nclogginginitialized) ncloginit();
oldlevel = nclog_global.tracelevel;
if(level < 0) {
nclog_global.tracelevel = level;
ncsetlogging(0);
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} else { /*(level >= 0)*/
nclog_global.tracelevel = level;
ncsetlogging(1);
nclogopen(NULL); /* use stderr */
}
return oldlevel;
}
void
nctrace(int level, const char* fcn, const char* fmt, ...)
{
va_list args;
va_start(args, fmt);
ncvtrace(level,fcn,fmt,args);
va_end(args);
}
void
nctracemore(int level, const char* fmt, ...)
{
va_list args;
va_start(args, fmt);
ncvtrace(level,NULL,fmt,args);
va_end(args);
}
void
ncvtrace(int level, const char* fcn, const char* fmt, va_list ap)
{
struct Frame* frame;
if(!nclogginginitialized) ncloginit();
if(nclog_global.tracelevel < 0) ncsetlogging(0);
if(fcn != NULL) {
frame = &nclog_global.frames[nclog_global.depth];
frame->fcn = fcn;
frame->level = level;
frame->depth = nclog_global.depth;
}
if(level <= nclog_global.tracelevel) {
if(fcn != NULL)
fprintf(nclog_global.nclogstream,"%s: (%d): %s:","Enter",level,fcn);
if(fmt != NULL)
vfprintf(nclog_global.nclogstream, fmt, ap);
fprintf(nclog_global.nclogstream, "\n" );
fflush(nclog_global.nclogstream);
}
if(fcn != NULL) nclog_global.depth++;
}
int
ncuntrace(const char* fcn, int err, const char* fmt, ...)
{
va_list args;
struct Frame* frame;
va_start(args, fmt);
if(nclog_global.depth == 0) {
fprintf(nclog_global.nclogstream,"*** Unmatched untrace: %s: depth==0\n",fcn);
goto done;
}
nclog_global.depth--;
frame = &nclog_global.frames[nclog_global.depth];
if(frame->depth != nclog_global.depth || strcmp(frame->fcn,fcn) != 0) {
fprintf(nclog_global.nclogstream,"*** Unmatched untrace: fcn=%s expected=%s\n",frame->fcn,fcn);
goto done;
}
if(frame->level <= nclog_global.tracelevel) {
fprintf(nclog_global.nclogstream,"%s: (%d): %s: ","Exit",frame->level,frame->fcn);
if(err)
fprintf(nclog_global.nclogstream,"err=(%d) '%s':",err,nc_strerror(err));
if(fmt != NULL)
vfprintf(nclog_global.nclogstream, fmt, args);
fprintf(nclog_global.nclogstream, "\n" );
fflush(nclog_global.nclogstream);
#ifdef HAVE_EXECINFO_H
if(err != 0)
ncbacktrace();
#endif
}
done:
va_end(args);
if(err != 0)
return ncbreakpoint(err);
else
return err;
}
int
ncbreakpoint(int err)
{
return err;
}
#ifdef HAVE_EXECINFO_H
#define MAXSTACKDEPTH 100
void
ncbacktrace(void)
{
int j, nptrs;
void* buffer[MAXSTACKDEPTH];
char **strings;
if(getenv("NCBACKTRACE") == NULL) return;
nptrs = backtrace(buffer, MAXSTACKDEPTH);
strings = backtrace_symbols(buffer, nptrs);
if (strings == NULL) {
perror("backtrace_symbols");
errno = 0;
return;
}
fprintf(stderr,"Backtrace:\n");
for(j = 0; j < nptrs; j++)
fprintf(stderr,"%s\n", strings[j]);
free(strings);
}
#endif
/**@}*/