netcdf-c/libsrc4/Makefile.am

# This is part of Unidata's netCDF package.  Copyright 2005-2018, see
# the COPYRIGHT file for more information.

# This automake file generates the Makefile to build netCDF-4.
# Ed Hartnett

include $(top_srcdir)/lib_flags.am

libnetcdf4_la_CPPFLAGS = ${AM_CPPFLAGS}

# This is our output. The netCDF-4 convenience library.
noinst_LTLIBRARIES = libnetcdf4.la
libnetcdf4_la_SOURCES = nc4dispatch.c nc4attr.c nc4dim.c nc4grp.c	\
nc4internal.c nc4type.c nc4var.c ncfunc.c error4.c    	         	\
ncindex.c nc4cache.c


EXTRA_DIST = CMakeLists.txt
More copyright stanza updates. 2018-12-06 14:56:42 -07:00			`# This is part of Unidata's netCDF package. Copyright 2005-2018, see`
removed mention of pnetcdf and hdf4 link options as they are handled by configure 2011-05-31 15:03:31 +00:00			`# the COPYRIGHT file for more information.`
moving to trunk subdir 2010-06-03 13:24:43 +00:00
removed mention of pnetcdf and hdf4 link options as they are handled by configure 2011-05-31 15:03:31 +00:00			`# This automake file generates the Makefile to build netCDF-4.`
more docs, more cleaning 2017-12-04 12:21:14 -07:00			`# Ed Hartnett`
moving to trunk subdir 2010-06-03 13:24:43 +00:00
minor refactor of the build system to work better for cross-compiling 2011-03-15 10:19:08 +00:00			`include $(top_srcdir)/lib_flags.am`
moving to trunk subdir 2010-06-03 13:24:43 +00:00
minor refactor of the build system to work better for cross-compiling 2011-03-15 10:19:08 +00:00			`libnetcdf4_la_CPPFLAGS = ${AM_CPPFLAGS}`
moving to trunk subdir 2010-06-03 13:24:43 +00:00
removed mention of pnetcdf and hdf4 link options as they are handled by configure 2011-05-31 15:03:31 +00:00			`# This is our output. The netCDF-4 convenience library.`
			`noinst_LTLIBRARIES = libnetcdf4.la`
Mostly revert the filter code to reduce its complexity of use. re: https://github.com/Unidata/netcdf-c/issues/1836 Revert the internal filter code to simplify it. From the user's point of view, the only visible changes should be: 1. The functions that convert text to filter specs have had their signature reverted and have been moved to netcdf_aux.h 2. Some filter API functions now return NC_ENOFILTER when inquiry is made about some filter. Internally,the dispatch table has been modified to get rid of the filter_actions entry and associated complex structures. It has been replaced with inq_var_filter_ids and inq_var_filter_info entries and the dispatch table version has been bumped to 3. Corresponding NOOP and NOTNC4 functions were added to libdispatch/dnotnc4.c. Also, the filter_action entries in dispatch tables were replaced for all dispatch code bases (HDF5, DAP2, etc). This should only impact UDF users. In the process, it became clear that the form of the filters field in NC_VAR_INFO_T was format dependent, so I converted it to be of type void* and pushed its management into the various dispatch code bases. Specifically libhdf5 and libnczarr now manage the filters field in their own way. The auxilliary functions for parsing textual filter specifications were moved to netcdf_aux.h and were renamed to the following: * ncaux_h5filterspec_parse * ncaux_h5filterspec_parselist * ncaux_h5filterspec_free * ncaux_h5filter_fix8 Misc. Other Changes: 1. Document NUG/filters.md updated to reflect the changes above. 2. All the old data types (structs and enums) used by filter_actions actions were deleted. The exception is the NC_H5_Filterspec because it is needed by ncaux_h5filterspec_parselist. 3. Clientside filters were removed -- another enhancement for which no-one ever asked. 4. The ability to remove filters was itself removed. 5. Some functionality needed by nczarr was moved from libhdf5 to libsrc4 e.g. nc4_find_default_chunksizes 6. All the filterx code was removed 7. ncfilter.h and nc4filter.c no longer used Misc. Unrelated Changes: 1. The nczarr_test makefile clean was leaving some directories; so add clean-local to take care of them. 2020-09-27 12:43:46 -06:00			`libnetcdf4_la_SOURCES = nc4dispatch.c nc4attr.c nc4dim.c nc4grp.c \`
			`nc4internal.c nc4type.c nc4var.c ncfunc.c error4.c \`
Additional Fixes to NCZarr Primary Fixes: * Add a whole variable optimization -- used in the rare case that nc_get/put_vara covers the whole of a variable and the variable has a single chunk. * Fix chunking error when stride causes whole chunks to be skipped. * Fix some memory leaks * Add test cases * Add one performance test to nczarr_test/. This uses the timer utils from unit_test: timer_utils.[ch]. * Move ncdumpchunks utility from ncdump to nczarr_test Misc. Other Changes: * Make check for aws libraries conditional on --enable-nczarr-s3 * Remove all but one bm tests from nczarr_test until they are working. * Remove another dependency on HDF5 from supposedly non-HDF5 specific code; specifically hdf5_log_hdf5. * Make the BAIL2 macro be hdf5 specific and replace elsewhere with an HDF5 independent equivalent. * Move hdf5cache.c to libsrc4/nc4cache.c because it is used by nczarr. * Modify unit_tests so that some of them are run even if using Windows. * Misc. small bug fixes and refactors and memory leaks. * Rename some conflicting tests for cmake. * Attempted to make nc_perf work with cmake and failed. 2020-12-16 20:48:02 -07:00			`ncindex.c nc4cache.c`
removed mention of pnetcdf and hdf4 link options as they are handled by configure 2011-05-31 15:03:31 +00:00
Add support for multiple filters per variable. re: https://github.com/Unidata/netcdf-c/issues/1584 Support has been added for multiple filters per variable. This affects a number of components in netcdf. The new APIs are documented in NUG/filters.md. The primary changes are: * A set of new functions are provided (see __include/netcdf_filter.h__). - Obtain a list of the filters associated with a variable - Obtain the parameters for a specific filter. * The existing __nc_inq_var_filter__ function now returns info about the first defined filter. * The utilities (ncgen, ncdump, and nccopy) now support an extended format for specifying a sequence of filters. The general form is __<filter>\|<filter>..._. * The ncdump _Filter attribute now dumps a list of all the filters associated with a variable using the above new format. * Filter specifications can now use a filter name instead of number for filters known to the netcdf library, which in turn is taken from the HDF5 filter registration page. * New errors are defined: NC_EFILTER and NC_ENOFILTER. The latter is returned if an attempt is made to access an unknown filter. * Internally, the dispatch table has been extended to add a function to handle all of the filter functions. * New, filter-related, tests were added to nc_test4. * A new plugin was added to the plugins directory to help with testing. Notes: 1. The shuffle and fletcher32 filters are not part of the multifilter system. Misc. changes: 1. A debug module was added to libhdf5 to help catch error locations. 2020-02-16 12:59:33 -07:00
more docs, more cleaning 2017-12-04 12:21:14 -07:00			`EXTRA_DIST = CMakeLists.txt`