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hdf5/test/objcopy.c
Quincey Koziol 7ba5922dca [svn-r16439] Description: 
Bring r16435 from revise_chunks branch back to trunk:

        Expand object copy tests for chunked datasets to include 1-D datasets
with an unlimited dimension.  (Fix typo in comment for test/links.c)

Tested on:
        FreeBSD/32 6.3 (duty) in debug mode
	(more thoroughly tested already on revise_chunks branch)
2009-02-05 10:50:25 -05:00

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/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by The HDF Group. *
* Copyright by the Board of Trustees of the University of Illinois. *
* All rights reserved. *
* *
* This file is part of HDF5. The full HDF5 copyright notice, including *
* terms governing use, modification, and redistribution, is contained in *
* the files COPYING and Copyright.html. COPYING can be found at the root *
* of the source code distribution tree; Copyright.html can be found at the *
* root level of an installed copy of the electronic HDF5 document set and *
* is linked from the top-level documents page. It can also be found at *
* http://hdfgroup.org/HDF5/doc/Copyright.html. If you do not have *
* access to either file, you may request a copy from help@hdfgroup.org. *
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
/*
* Programmer: Peter X. Cao
* May 01, 2005
*
* Purpose: Test H5Ocopy().
*/
#include <time.h>
#include "h5test.h"
/*
* This file needs to access private information from the H5S package.
* This file also needs to access the dataspace testing code.
*/
#define H5S_PACKAGE
#define H5S_TESTING
#include "H5Spkg.h" /* Dataspaces */
/*
* This file needs to access private information from the H5P package.
* This file also needs to access the property list testing code.
*/
#define H5P_PACKAGE
#define H5P_TESTING
#include "H5Ppkg.h" /* Property Lists */
#include "H5Dprivate.h" /* Datasets (for EFL property name) */
const char *FILENAME[] = {
"objcopy_src",
"objcopy_dst",
"objcopy_ext",
NULL
};
/* Configuration, really a series of bit flags. Maximum value is all three
* bit flags enabled.
*/
#define CONFIG_SHARE_SRC 1
#define CONFIG_SHARE_DST 2
#define CONFIG_NEW_FORMAT 4
#define CONFIG_DENSE 8
#define MAX_CONFIGURATION 15
#define FILE_EXT "objcopy_ext.dat"
/* The fill_old.h5 is generated from gen_old_fill.c in HDF5 'test' directory
* for version 1.4(after 1.4.3). To get this data file, simply compile
* gen_old_fill.c with HDF5 library (before v1.5) and run it. */
#define FILE_OLD_LAYOUT "fill_old.h5"
#define NAME_DATATYPE_SIMPLE "H5T_NATIVE_INT"
#define NAME_DATATYPE_SIMPLE2 "H5T_NATIVE_INT-2"
#define NAME_DATATYPE_VL "vlen of int"
#define NAME_DATATYPE_VL_VL "vlen of vlen of int"
#define NAME_DATASET_SIMPLE "dataset_simple"
#define NAME_DATASET_SIMPLE2 "dataset_simple_copy"
#define NAME_DATASET_COMPOUND "dataset_compound"
#define NAME_DATASET_CHUNKED "dataset_chunked"
#define NAME_DATASET_CHUNKED2 "dataset_chunked2"
#define NAME_DATASET_COMPACT "dataset_compact"
#define NAME_DATASET_EXTERNAL "dataset_ext"
#define NAME_DATASET_NAMED_DTYPE "dataset_named_dtype"
#define NAME_DATASET_NAMED_DTYPE2 "dataset_named_dtype2"
#define NAME_DATASET_MULTI_OHDR "dataset_multi_ohdr"
#define NAME_DATASET_MULTI_OHDR2 "dataset_multi_ohdr2"
#define NAME_DATASET_VL "dataset_vl"
#define NAME_DATASET_VL_VL "dataset_vl_vl"
#define NAME_DATASET_SUB_SUB "/g0/g00/g000/dataset_simple"
#define NAME_GROUP_UNCOPIED "/uncopied"
#define NAME_GROUP_EMPTY "/empty"
#define NAME_GROUP_TOP "/g0"
#define NAME_GROUP_SUB "/g0/g00"
#define NAME_GROUP_SUB_2 "/g0/g01"
#define NAME_GROUP_SUB_SUB "/g0/g00/g000"
#define NAME_GROUP_SUB_SUB2 "g000"
#define NAME_GROUP_DATASET "/g0/dataset_simple"
#define NAME_GROUP_LINK "/g_links"
#define NAME_GROUP_LINK2 "/g_links2"
#define NAME_GROUP_LOOP "g_loop"
#define NAME_GROUP_LOOP2 "g_loop2"
#define NAME_GROUP_LOOP3 "g_loop3"
#define NAME_GROUP_REF "ref_grp"
#define NAME_LINK_DATASET "/g_links/dataset_simple"
#define NAME_LINK_HARD "/g_links/hard_link_to_dataset_simple"
#define NAME_LINK_SOFT "/g_links/soft_link_to_dataset_simple"
#define NAME_LINK_SOFT2 "/g_links2/soft_link_to_dataset_simple"
#define NAME_LINK_EXTERN "/g_links/external_link_to_dataset_simple"
#define NAME_LINK_SOFT_DANGLE "/g_links/soft_link_to_nowhere"
#define NAME_LINK_SOFT_DANGLE2 "/g_links2/soft_link_to_nowhere"
#define NAME_OLD_FORMAT "/dset1"
#define NAME_BUF_SIZE 1024
#define ATTR_NAME_LEN 80
#define DIM_SIZE_1 12
#define DIM_SIZE_2 6
#define CHUNK_SIZE_1 5 /* Not an even fraction of dimension sizes, so we test copying partial chunks */
#define CHUNK_SIZE_2 5
#define NUM_SUB_GROUPS 20
#define NUM_WIDE_LOOP_GROUPS 10
#define NUM_DATASETS 10
char src_obj_full_name[215]; /* the full path + name of the object to be copied */
unsigned num_attributes_g; /* Number of attributes created */
/* Table containing object id and object name */
/* (Used for detecting duplicate objects when comparing groups */
static struct {
size_t nalloc; /* number of slots allocated */
size_t nobjs; /* number of objects */
haddr_t *obj; /* Addresses of objects seen */
} idtab_g;
/* Local function prototypes */
static int
compare_data(hid_t parent1, hid_t parent2, hid_t pid, hid_t tid, size_t nelmts,
const void *buf1, const void *buf2, hid_t obj_owner);
static int
compare_datasets(hid_t did, hid_t did2, hid_t pid, const void *wbuf);
static int
compare_groups(hid_t gid, hid_t gid2, hid_t pid, int depth, unsigned copy_flags);
/*-------------------------------------------------------------------------
* Function: addr_insert
*
* Purpose: Add an address to the table.
*
* Return: void
*
* Programmer: Quincey Koziol
* Saturday, November 5, 2005
*
*-------------------------------------------------------------------------
*/
static void
addr_insert(H5O_info_t *oi)
{
size_t n;
/* Don't add it if the link count is 1 because such an object can only
* be encountered once. */
if(oi->rc < 2)
return;
/* Extend the table */
if(idtab_g.nobjs >= idtab_g.nalloc) {
idtab_g.nalloc = MAX(256, 2*idtab_g.nalloc);
idtab_g.obj = (haddr_t *)HDrealloc(idtab_g.obj, idtab_g.nalloc * sizeof(idtab_g.obj[0]));
} /* end if */
/* Insert the entry */
n = idtab_g.nobjs++;
idtab_g.obj[n] = oi->addr;
} /* end addr_insert() */
/*-------------------------------------------------------------------------
* Function: addr_lookup
*
* Purpose: Check if address has already been encountered
*
* Return: Success: TRUE/FALSE
*
* Failure: (can't fail)
*
* Programmer: Quincey Koziol
* Saturday, November 5, 2005
*
*-------------------------------------------------------------------------
*/
static hbool_t
addr_lookup(H5O_info_t *oi)
{
size_t n;
if(oi->rc < 2) return FALSE; /*only one link possible*/
for(n = 0; n < idtab_g.nobjs; n++)
if(H5F_addr_eq(idtab_g.obj[n], oi->addr))
return TRUE;
return FALSE;
} /* end addr_lookup() */
/*-------------------------------------------------------------------------
* Function: addr_reset
*
* Purpose: Reset the address tracking data structures
*
* Return: void
*
* Programmer: Quincey Koziol
* Saturday, November 5, 2005
*
*-------------------------------------------------------------------------
*/
static void
addr_reset(void)
{
if(idtab_g.obj)
HDfree(idtab_g.obj);
idtab_g.obj = NULL;
idtab_g.nalloc = idtab_g.nobjs = 0;
} /* end addr_reset() */
/*-------------------------------------------------------------------------
* Function: attach_ref_attr
*
* Purpose: Create an attribute with object references
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Peter Cao
* Friday, August 4, 2006
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
static herr_t
attach_ref_attr(hid_t file_id, hid_t loc_id)
{
char dsetname1[] = "dataset1_pointed_by_ref_attr";
char dsetname2[] = "dataset2_pointed_by_ref_attr";
hid_t did1 = (-1), did2 = (-1), aid = (-1), sid = (-1), sid_ref = (-1);
hsize_t dims[2] = {2,9};
hsize_t dims_ref[1] = {2};
hobj_ref_t ref[2];
int data1[2][9] = {{1,1,1,1,1,1,1,1,1},{1,1,1,1,1,1,1,1,18}};
int data2[2][9] = {{2,2,2,2,2,2,2,2,2},{2,2,2,2,2,2,2,2,18}};
/* creates two simple datasets */
if((sid = H5Screate_simple(2, dims, NULL)) < 0) TEST_ERROR
if((sid_ref = H5Screate_simple(1, dims_ref, NULL)) < 0) TEST_ERROR
if((did1 = H5Dcreate2(file_id, dsetname1, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
if(H5Dwrite(did1, H5T_NATIVE_INT, H5S_ALL , H5S_ALL, H5P_DEFAULT,data1) < 0) TEST_ERROR
if((did2 = H5Dcreate2(file_id, dsetname2, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
if(H5Dwrite(did2, H5T_NATIVE_INT, H5S_ALL , H5S_ALL, H5P_DEFAULT,data2) < 0) TEST_ERROR
/* create an attribute with two object references */
if(H5Rcreate(&ref[0], file_id, dsetname1, H5R_OBJECT, -1) < 0) TEST_ERROR
if(H5Rcreate(&ref[1], file_id, dsetname2, H5R_OBJECT, -1) < 0) TEST_ERROR
if((aid = H5Acreate2(loc_id, "obj_ref_attr", H5T_STD_REF_OBJ, sid_ref, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
if(H5Awrite(aid, H5T_STD_REF_OBJ, ref) < 0) TEST_ERROR
if(H5Sclose(sid) < 0) TEST_ERROR
if(H5Sclose(sid_ref) < 0) TEST_ERROR
if(H5Dclose(did1) < 0) TEST_ERROR
if(H5Dclose(did2) < 0) TEST_ERROR
if(H5Aclose(aid) < 0) TEST_ERROR
return 0;
error:
H5E_BEGIN_TRY {
H5Sclose(sid);
H5Sclose(sid_ref);
H5Dclose(did1);
H5Dclose(did2);
H5Aclose(aid);
} H5E_END_TRY;
return(-1);
}
/*-------------------------------------------------------------------------
* Function: attach_reg_ref_attr
*
* Purpose: Create an attribute with object references
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Peter Cao
* Monday, March 5, 2006
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
static herr_t
attach_reg_ref_attr(hid_t file_id, hid_t loc_id)
{
const char dsetnamev[] = "dataset_pointed_by_reg_ref_attr";
hid_t aid = (-1);
hid_t space_id = (-1); /* dataspace identifiers */
hid_t spacer_id = (-1); /* dataspace identifiers */
hid_t dsetv_id = (-1); /*dataset identifiers*/
hsize_t dims[2] = {2,9};
hsize_t dimsr[1] = {2};
int rank = 2;
int rankr =1;
hdset_reg_ref_t ref[2];
int data[2][9] = {{1,1,2,3,3,4,5,5,999},{1,2,2,3,4,4,5,6,999}};
hsize_t start[2] = {0, 3};
hsize_t count[2] = {2, 3};
hsize_t coord[3][2] = {{0, 0}, {1, 6}, {0, 8}};
size_t num_points = 3;
/* create a 2D dataset */
if((space_id = H5Screate_simple(rank, dims, NULL)) < 0) TEST_ERROR
if((spacer_id = H5Screate_simple(rankr, dimsr, NULL)) < 0) TEST_ERROR
if((dsetv_id = H5Dcreate2(file_id, dsetnamev, H5T_NATIVE_INT, space_id, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
if(H5Dwrite(dsetv_id, H5T_NATIVE_INT, H5S_ALL , H5S_ALL, H5P_DEFAULT,data) < 0) TEST_ERROR
/* create reg_ref of block selection */
if(H5Sselect_hyperslab(space_id,H5S_SELECT_SET,start,NULL,count,NULL) < 0) TEST_ERROR
if(H5Rcreate(&ref[0], file_id, dsetnamev, H5R_DATASET_REGION, space_id) < 0) TEST_ERROR
/* create reg_ref of point selection */
if(H5Sselect_none(space_id) < 0) TEST_ERROR
if(H5Sselect_elements(space_id, H5S_SELECT_SET, num_points, (const hsize_t *)coord) < 0) TEST_ERROR
if(H5Rcreate(&ref[1], file_id, dsetnamev, H5R_DATASET_REGION, space_id) < 0) TEST_ERROR
/* create reg_ref attribute */
if((aid = H5Acreate2(loc_id, "reg_ref_attr", H5T_STD_REF_DSETREG, spacer_id, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
if(H5Awrite(aid, H5T_STD_REF_DSETREG, ref) < 0) TEST_ERROR
/* attach the reg_ref attribute to the dataset itself */
if(H5Aclose(aid) < 0) TEST_ERROR
if((aid = H5Acreate2(dsetv_id, "reg_ref_attr", H5T_STD_REF_DSETREG, spacer_id, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
if(H5Awrite(aid, H5T_STD_REF_DSETREG, ref) < 0) TEST_ERROR
if(H5Sclose(spacer_id) < 0) TEST_ERROR
if(H5Sclose(space_id) < 0) TEST_ERROR
if(H5Dclose(dsetv_id) < 0) TEST_ERROR
if(H5Aclose(aid) < 0) TEST_ERROR
return 0;
error:
H5E_BEGIN_TRY {
H5Sclose(spacer_id);
H5Sclose(space_id);
H5Dclose(dsetv_id);
H5Aclose(aid);
} H5E_END_TRY;
return(-1);
}
/*-------------------------------------------------------------------------
* Function: create_reg_ref_dataset
*
* Purpose: Create a dataset with region references
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Peter Cao
* Friday, August 4, 2006
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
static herr_t
create_reg_ref_dataset(hid_t file_id, hid_t loc_id)
{
const char dsetnamev[] = "dataset_pointed_by_ref_dset";
const char dsetnamer[] = "dataset_with_reg_ref";
const char dsetnamer1[] = "compact_dataset_with_reg_ref";
const char dsetnamer2[] = "compressed_dataset_with_reg_ref";
hid_t space_id = (-1); /* dataspace identifiers */
hid_t spacer_id = (-1);
hid_t dsetv_id = (-1); /*dataset identifiers*/
hid_t dsetr_id = (-1);
hsize_t dims[2] = {2,9};
hsize_t dimsr[1] = {2};
int rank = 2;
int rankr =1;
hsize_t chunk_size=1;
hdset_reg_ref_t ref[2];
int data[2][9] = {{1,1,2,3,3,4,5,5,6},{1,2,2,3,4,4,5,6,6}};
hsize_t start[2];
hsize_t count[2];
hsize_t coord[3][2] = {{0, 0}, {1, 6}, {0, 8}};
size_t num_points = 3;
hid_t pid = (-1);
if((space_id = H5Screate_simple(rank, dims, NULL)) < 0) TEST_ERROR
if((spacer_id = H5Screate_simple(rankr, dimsr, NULL)) < 0) TEST_ERROR
if((dsetv_id = H5Dcreate2(file_id, dsetnamev, H5T_NATIVE_INT, space_id, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
if(H5Dwrite(dsetv_id, H5T_NATIVE_INT, H5S_ALL , H5S_ALL, H5P_DEFAULT,data) < 0) TEST_ERROR
if((dsetr_id = H5Dcreate2(loc_id, dsetnamer, H5T_STD_REF_DSETREG, spacer_id, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
start[0] = 0;
start[1] = 3;
count[0] = 2;
count[1] = 3;
if(H5Sselect_hyperslab(space_id,H5S_SELECT_SET,start,NULL,count,NULL) < 0) TEST_ERROR
if(H5Rcreate(&ref[0], file_id, dsetnamev, H5R_DATASET_REGION, space_id) < 0) TEST_ERROR
if(H5Sselect_none(space_id) < 0) TEST_ERROR
if(H5Sselect_elements(space_id, H5S_SELECT_SET, num_points, (const hsize_t *)coord) < 0) TEST_ERROR
if(H5Rcreate(&ref[1], file_id, dsetnamev, H5R_DATASET_REGION, space_id) < 0) TEST_ERROR
if(H5Dwrite(dsetr_id, H5T_STD_REF_DSETREG, H5S_ALL, H5S_ALL, H5P_DEFAULT,ref) < 0) TEST_ERROR
if(H5Dclose(dsetr_id) < 0) TEST_ERROR
/* create and set compact plist */
if((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR
if(H5Pset_layout(pid, H5D_COMPACT) < 0) TEST_ERROR
if((dsetr_id = H5Dcreate2(loc_id, dsetnamer1, H5T_STD_REF_DSETREG, spacer_id, H5P_DEFAULT, pid, H5P_DEFAULT)) < 0) TEST_ERROR
if(H5Pclose(pid) < 0) TEST_ERROR
if(H5Dwrite(dsetr_id, H5T_STD_REF_DSETREG, H5S_ALL, H5S_ALL, H5P_DEFAULT, ref) < 0) TEST_ERROR
if(H5Dclose(dsetr_id) < 0) TEST_ERROR
/* create and set comp & chunk plist */
if((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR
if(H5Pset_chunk(pid, 1, &chunk_size) < 0) TEST_ERROR
if(H5Pset_deflate(pid, 9) < 0) TEST_ERROR
if((dsetr_id = H5Dcreate2(loc_id, dsetnamer2, H5T_STD_REF_DSETREG, spacer_id, H5P_DEFAULT, pid, H5P_DEFAULT)) < 0) TEST_ERROR
if(H5Pclose(pid) < 0) TEST_ERROR
if(H5Dwrite(dsetr_id, H5T_STD_REF_DSETREG, H5S_ALL, H5S_ALL, H5P_DEFAULT,ref) < 0) TEST_ERROR
if(H5Dclose(dsetr_id) < 0) TEST_ERROR
if(H5Sclose(space_id) < 0) TEST_ERROR
if(H5Sclose(spacer_id) < 0) TEST_ERROR
if(H5Dclose(dsetv_id) < 0) TEST_ERROR
return 0;
error:
H5E_BEGIN_TRY {
H5Sclose(space_id);
H5Sclose(spacer_id);
H5Dclose(dsetr_id);
H5Dclose(dsetv_id);
H5Pclose(pid);
} H5E_END_TRY;
return(-1);
}
/*-------------------------------------------------------------------------
* Function: attach_attribute_vl
*
* Purpose: Attach an vlen attribute to the object to be copied
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Peter Cao
* Saturday, December 17, 2005
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
static int
test_copy_attach_attribute_vl(hid_t loc_id)
{
hid_t aid = -1, sid = -1, tid=-1;
hvl_t buf[4];
hsize_t dim1=4;
unsigned int i, j;
int ret_value = -1;
if((sid = H5Screate_simple(1, &dim1, NULL)) < 0 )
goto done;
if((tid = H5Tvlen_create(H5T_NATIVE_INT)) < 0)
goto done;
for(i = 0; i < 4; i++) {
buf[i].len = i*3+1;
buf[i].p = (int *)HDmalloc(buf[i].len * sizeof(int));
for(j = 0; j < buf[i].len; j++)
((int *)buf[i].p)[j] = (int)(j + 1);
} /* end for */
if((aid = H5Acreate2(loc_id, "vlen attribute", tid, sid, H5P_DEFAULT, H5P_DEFAULT)) < 0)
goto done;
if(H5Awrite(aid, tid, buf) < 0)
goto done;
ret_value = 0;
done:
if(tid >0 && sid > 0)
H5Dvlen_reclaim(tid, sid, H5P_DEFAULT, buf);
if(sid > 0)
H5Sclose(sid);
if(tid > 0)
H5Tclose(tid);
if(aid > 0)
H5Aclose(aid);
return ret_value;
} /* end of attach_attribute_vl */
/*-------------------------------------------------------------------------
* Function: test_copy_attach_attributes
*
* Purpose: Attach NUM_ATTRIBUTES attributes to the object to be copied
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Peter Cao
* Friday, September 30, 2005
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
static int
test_copy_attach_attributes(hid_t loc_id, hid_t type_id)
{
hid_t aid = -1, sid = -1;
char attr_name[ATTR_NAME_LEN];
int attr_data[2];
hsize_t dim1 = 2;
unsigned u;
int ret_value = -1;
if((sid = H5Screate_simple(1, &dim1, NULL)) < 0 )
goto done;
for(u = 0; u < num_attributes_g; u++) {
sprintf(attr_name, "%u attr", u);
/* Set attribute data */
attr_data[0] = (int)(100 * u);
attr_data[1] = (int)(200 * u);
if((aid = H5Acreate2(loc_id, attr_name, type_id, sid, H5P_DEFAULT, H5P_DEFAULT)) < 0)
goto done;
if(H5Awrite(aid, H5T_NATIVE_INT, attr_data) < 0)
goto done;
if(aid > 0)
H5Aclose(aid);
aid = -1;
}
ret_value = 0;
done:
if(sid > 0)
H5Sclose(sid);
if(aid > 0)
H5Aclose(aid);
return ret_value;
}
/*-------------------------------------------------------------------------
* Function: test_copy_attach_paired_attributes
*
* Purpose: Attach NUM_ATTRIBUTES attributes to a pair of objects to be copied
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Quincey Koziol
* Tuesday, November 1, 2005
*
*-------------------------------------------------------------------------
*/
static int
test_copy_attach_paired_attributes(hid_t loc_id, hid_t loc_id2, hid_t type_id)
{
hid_t aid = -1, sid = -1;
char attr_name[ATTR_NAME_LEN];
int attr_data[2];
unsigned u;
hsize_t dim1 = 2;
if((sid = H5Screate_simple(1, &dim1, NULL)) < 0 ) goto done;
for(u = 0; u < num_attributes_g; u++) {
sprintf(attr_name, "%u attr", u);
/* Set attribute data */
attr_data[0] = (int)(100 * u);
attr_data[1] = (int)(200 * u);
/* Add attribute to first object */
if((aid = H5Acreate2(loc_id, attr_name, type_id, sid, H5P_DEFAULT, H5P_DEFAULT)) < 0) goto done;
if(H5Awrite(aid, H5T_NATIVE_INT, attr_data) < 0) goto done;
if(H5Aclose(aid) < 0) goto done;
/* Add attribute to second object */
if((aid = H5Acreate2(loc_id2, attr_name, type_id, sid, H5P_DEFAULT, H5P_DEFAULT)) < 0) goto done;
if(H5Awrite(aid, H5T_NATIVE_INT, attr_data) < 0) goto done;
if(H5Aclose(aid) < 0) goto done;
}
if(H5Sclose(sid) < 0) goto done;
return 0;
done:
if(sid > 0)
H5Sclose(sid);
if(aid > 0)
H5Aclose(aid);
return -1;
} /* end test_copy_attach_paired_attributes() */
/*-------------------------------------------------------------------------
* Function: compare_attribute
*
* Purpose: Compare two attributes to check that they are equal
*
* Return: TRUE if attributes are equal/FALSE if they are different
*
* Programmer: Peter Cao
* Saturday, December 17, 2005
*
*-------------------------------------------------------------------------
*/
static int
compare_attribute(hid_t aid, hid_t aid2, hid_t pid, const void *wbuf, hid_t obj_owner)
{
hid_t sid = -1, sid2 = -1; /* Dataspace IDs */
hid_t tid = -1, tid2 = -1; /* Datatype IDs */
size_t elmt_size; /* Size of datatype */
htri_t is_committed; /* If the datatype is committed */
htri_t is_committed2; /* If the datatype is committed */
hssize_t nelmts; /* # of elements in dataspace */
void *rbuf = NULL; /* Buffer for reading raw data */
void *rbuf2 = NULL; /* Buffer for reading raw data */
/* Check the datatypes are equal */
/* Open the datatype for the source attribute */
if((tid = H5Aget_type(aid)) < 0) TEST_ERROR
/* Open the datatype for the destination attribute */
if((tid2 = H5Aget_type(aid2)) < 0) TEST_ERROR
/* Check that both datatypes are committed/not committed */
if((is_committed = H5Tcommitted(tid)) < 0) TEST_ERROR
if((is_committed2 = H5Tcommitted(tid2)) < 0) TEST_ERROR
if(is_committed != is_committed2) TEST_ERROR
/* Compare the datatypes */
if(H5Tequal(tid, tid2) != TRUE) TEST_ERROR
/* Determine the size of datatype (for later) */
if((elmt_size = H5Tget_size(tid)) == 0) TEST_ERROR
/* Check the dataspaces are equal */
/* Open the dataspace for the source attribute */
if((sid = H5Aget_space(aid)) < 0) TEST_ERROR
/* Open the dataspace for the destination attribute */
if((sid2 = H5Aget_space(aid2)) < 0) TEST_ERROR
/* Compare the dataspaces */
if(H5Sextent_equal(sid, sid2) != TRUE) TEST_ERROR
/* Determine the number of elements in dataspace (for later) */
if((nelmts = H5Sget_simple_extent_npoints(sid2)) < 0) TEST_ERROR
/* Check the raw data is equal */
/* Allocate & initialize space for the raw data buffers */
if((rbuf = HDcalloc( elmt_size, (size_t)nelmts)) == NULL) TEST_ERROR
if((rbuf2 = HDcalloc( elmt_size, (size_t)nelmts)) == NULL) TEST_ERROR
/* Read data from the source attribute */
if(H5Aread(aid, tid, rbuf) < 0) TEST_ERROR
/* Read data from the destination attribute */
if(H5Aread(aid2, tid2, rbuf2) < 0) TEST_ERROR
/* Check raw data read in against data written out */
if(wbuf) {
if(!compare_data(aid, 0, pid, tid, (size_t)nelmts, wbuf, rbuf, obj_owner)) TEST_ERROR
if(!compare_data(aid2, 0, pid, tid2, (size_t)nelmts, wbuf, rbuf2, obj_owner)) TEST_ERROR
} /* end if */
/* Don't have written data, just compare data between the two attributes */
else
if(!compare_data(aid, aid2, pid, tid, (size_t)nelmts, rbuf, rbuf2, obj_owner)) TEST_ERROR
/* Reclaim vlen data, if necessary */
if(H5Tdetect_class(tid, H5T_VLEN) == TRUE)
if(H5Dvlen_reclaim(tid, sid, H5P_DEFAULT, rbuf) < 0) TEST_ERROR
if(H5Tdetect_class(tid2, H5T_VLEN) == TRUE)
if(H5Dvlen_reclaim(tid2, sid2, H5P_DEFAULT, rbuf2) < 0) TEST_ERROR
/* Release raw data buffers */
HDfree(rbuf);
HDfree(rbuf2);
/* close the source dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
/* close the destination dataspace */
if(H5Sclose(sid2) < 0) TEST_ERROR
/* close the source datatype */
if(H5Tclose(tid) < 0) TEST_ERROR
/* close the destination datatype */
if(H5Tclose(tid2) < 0) TEST_ERROR
return TRUE;
error:
H5E_BEGIN_TRY {
if(rbuf)
HDfree(rbuf);
if(rbuf2)
HDfree(rbuf2);
H5Sclose(sid2);
H5Sclose(sid);
H5Tclose(tid2);
H5Tclose(tid);
} H5E_END_TRY;
return FALSE;
} /* end compare_attribute() */
/*-------------------------------------------------------------------------
* Function: compare_std_attributes
*
* Purpose: Compare "standard" attributes on two objects to check that they are equal
*
* Return: TRUE if objects have same attributes/FALSE if they are different
*
* Programmer: Quincey Koziol
* Monday, October 31, 2005
*
* Note: This isn't very general, the attributes are assumed to be
* those written in test_copy_attach_attributes().
*
* Modifier: Peter Cao
* Wednesday, March 21, 2007
* Change to compare any attributes of two objects
*
*-------------------------------------------------------------------------
*/
static int
compare_std_attributes(hid_t oid, hid_t oid2, hid_t pid)
{
hid_t aid = -1, aid2 = -1; /* Attribute IDs */
H5O_info_t oinfo1, oinfo2; /* Object info */
unsigned cpy_flags; /* Object copy flags */
/* Retrieve the object copy flags from the property list, if it's non-DEFAULT */
if(pid != H5P_DEFAULT) {
if(H5Pget_copy_object(pid, &cpy_flags) < 0) TEST_ERROR
} /* end if */
else
cpy_flags = 0;
/* Check the number of attributes on source dataset */
if(H5Oget_info(oid, &oinfo1) < 0) TEST_ERROR
/* Check the number of attributes on destination dataset */
if(H5Oget_info(oid2, &oinfo2) < 0) TEST_ERROR
if(cpy_flags & H5O_COPY_WITHOUT_ATTR_FLAG) {
/* Check that the destination has no attributes */
if(oinfo2.num_attrs != 0) TEST_ERROR
} /* end if */
else {
char attr_name[ATTR_NAME_LEN]; /* Attribute name */
unsigned i; /* Local index variable */
/* Compare the number of attributes */
if(oinfo1.num_attrs != oinfo2.num_attrs) TEST_ERROR
/* Check the attributes are equal */
for(i = 0; i < (unsigned)oinfo1.num_attrs; i++) {
if((aid = H5Aopen_by_idx(oid, ".", H5_INDEX_CRT_ORDER, H5_ITER_INC, (hsize_t)i, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
if(H5Aget_name(aid, ATTR_NAME_LEN, attr_name) < 0) TEST_ERROR
if((aid2 = H5Aopen(oid2, attr_name, H5P_DEFAULT)) < 0) TEST_ERROR
/* Check the attributes are equal */
if(!compare_attribute(aid, aid2, pid, NULL, oid)) TEST_ERROR
/* Close the attributes */
if(H5Aclose(aid) < 0) TEST_ERROR
if(H5Aclose(aid2) < 0) TEST_ERROR
} /* end for */
} /* end if */
/* Objects should be the same. :-) */
return TRUE;
error:
H5E_BEGIN_TRY {
H5Aclose(aid2);
H5Aclose(aid);
} H5E_END_TRY;
return FALSE;
} /* end compare_std_attributes() */
/*-------------------------------------------------------------------------
* Function: compare_data
*
* Purpose: Compare two buffers of data to check that they are equal
*
* Return: TRUE if buffer are equal/FALSE if they are different
*
* Programmer: Quincey Koziol
* Monday, November 21, 2005
*
*-------------------------------------------------------------------------
*/
static int
compare_data(hid_t parent1, hid_t parent2, hid_t pid, hid_t tid, size_t nelmts,
const void *buf1, const void *buf2, hid_t obj_owner)
{
size_t elmt_size; /* Size of an element */
/* Check size of each element */
if((elmt_size = H5Tget_size(tid)) == 0) TEST_ERROR
/* Check for vlen datatype */
if(H5Tdetect_class(tid, H5T_VLEN) == TRUE) {
const hvl_t *vl_buf1, *vl_buf2; /* Aliases for buffers to compare */
hid_t base_tid; /* Base type of vlen datatype */
size_t u; /* Local index variable */
/* Check for "simple" vlen datatype */
if(H5Tget_class(tid) != H5T_VLEN) TEST_ERROR
/* Get base type of vlen datatype */
if((base_tid = H5Tget_super(tid)) < 0) TEST_ERROR
/* Loop over elements in buffers */
vl_buf1 = (const hvl_t *)buf1;
vl_buf2 = (const hvl_t *)buf2;
for(u = 0; u < nelmts; u++, vl_buf1++, vl_buf2++) {
/* Check vlen lengths */
if(vl_buf1->len != vl_buf2->len) TEST_ERROR
/* Check vlen data */
if(!compare_data(parent1, parent2, pid, base_tid, vl_buf1->len, vl_buf1->p, vl_buf2->p, obj_owner)) TEST_ERROR
} /* end for */
if(H5Tclose(base_tid) < 0) TEST_ERROR
} /* end if */
else if(H5Tdetect_class(tid, H5T_REFERENCE) == TRUE) {
size_t u; /* Local index variable */
/* Check for "simple" vlen datatype */
if(H5Tget_class(tid) != H5T_REFERENCE) TEST_ERROR
/* Check for object or region reference */
if(H5Tequal(tid, H5T_STD_REF_OBJ) > 0) {
const hobj_ref_t *ref_buf1, *ref_buf2; /* Aliases for buffers to compare */
/* Loop over elements in buffers */
ref_buf1 = (const hobj_ref_t *)buf1;
ref_buf2 = (const hobj_ref_t *)buf2;
for(u = 0; u < nelmts; u++, ref_buf1++, ref_buf2++) {
hid_t obj1_id, obj2_id; /* IDs for objects referenced */
H5O_type_t obj1_type, obj2_type; /* Types of objects referenced */
/* Check for types of objects handled */
if(H5Rget_obj_type2(parent1, H5R_OBJECT, ref_buf1, &obj1_type) < 0) TEST_ERROR
if(H5Rget_obj_type2(parent2, H5R_OBJECT, ref_buf2, &obj2_type) < 0) TEST_ERROR
if(obj1_type != obj2_type) TEST_ERROR
/* Open referenced objects */
if((obj1_id = H5Rdereference(parent1, H5R_OBJECT, ref_buf1)) < 0) TEST_ERROR
if((obj2_id = H5Rdereference(parent2, H5R_OBJECT, ref_buf2)) < 0) TEST_ERROR
/* break the infinite loop when the ref_object points to itself */
if(obj_owner > 0) {
H5O_info_t oinfo1, oinfo2;
if(H5Oget_info(obj_owner, &oinfo1) < 0) TEST_ERROR
if(H5Oget_info(obj1_id, &oinfo2) < 0) TEST_ERROR
if(H5F_addr_eq(oinfo1.addr, oinfo2.addr)) {
if(H5Oclose(obj1_id) < 0) TEST_ERROR
if(H5Oclose(obj2_id) < 0) TEST_ERROR
return TRUE;
}
}
/* Check for types of objects handled */
switch(obj1_type)
{
case H5O_TYPE_DATASET:
if(compare_datasets(obj1_id, obj2_id, pid, NULL) != TRUE) TEST_ERROR
break;
case H5O_TYPE_GROUP:
if(compare_groups(obj1_id, obj2_id, pid, -1, 0) != TRUE) TEST_ERROR
break;
case H5O_TYPE_NAMED_DATATYPE:
if(H5Tequal(obj1_id, obj2_id) != TRUE) TEST_ERROR
break;
default:
TEST_ERROR
} /* end switch */
/* Close objects */
if(H5Oclose(obj1_id) < 0) TEST_ERROR
if(H5Oclose(obj2_id) < 0) TEST_ERROR
} /* end for */
} /* end if */
else if(H5Tequal(tid, H5T_STD_REF_DSETREG) > 0) {
const hdset_reg_ref_t *ref_buf1, *ref_buf2; /* Aliases for buffers to compare */
/* Loop over elements in buffers */
ref_buf1 = (const hdset_reg_ref_t *)buf1;
ref_buf2 = (const hdset_reg_ref_t *)buf2;
for(u = 0; u < nelmts; u++, ref_buf1++, ref_buf2++) {
hid_t obj1_id, obj2_id; /* IDs for objects referenced */
hid_t obj1_sid, obj2_sid; /* Dataspace IDs for objects referenced */
H5O_type_t obj1_type, obj2_type; /* Types of objects referenced */
/* Check for types of objects handled */
if(H5Rget_obj_type2(parent1, H5R_DATASET_REGION, ref_buf1, &obj1_type) < 0) TEST_ERROR
if(H5Rget_obj_type2(parent2, H5R_DATASET_REGION, ref_buf2, &obj2_type) < 0) TEST_ERROR
if(obj1_type != obj2_type) TEST_ERROR
/* Open referenced objects */
if((obj1_id = H5Rdereference(parent1, H5R_DATASET_REGION, ref_buf1)) < 0) TEST_ERROR
if((obj2_id = H5Rdereference(parent2, H5R_DATASET_REGION, ref_buf2)) < 0) TEST_ERROR
/* break the infinite loop when the ref_object points to itself */
if(obj_owner > 0) {
H5O_info_t oinfo1, oinfo2;
if(H5Oget_info(obj_owner, &oinfo1) < 0) TEST_ERROR
if(H5Oget_info(obj1_id, &oinfo2) < 0) TEST_ERROR
if(H5F_addr_eq(oinfo1.addr, oinfo2.addr)) {
if(H5Oclose(obj1_id) < 0) TEST_ERROR
if(H5Oclose(obj2_id) < 0) TEST_ERROR
return TRUE;
}
}
/* Check for types of objects handled */
switch(obj1_type)
{
case H5O_TYPE_DATASET:
if(compare_datasets(obj1_id, obj2_id, pid, NULL) != TRUE) TEST_ERROR
break;
case H5O_TYPE_GROUP:
if(compare_groups(obj1_id, obj2_id, pid, -1, 0) != TRUE) TEST_ERROR
break;
case H5O_TYPE_NAMED_DATATYPE:
if(H5Tequal(obj1_id, obj2_id) != TRUE) TEST_ERROR
break;
default:
TEST_ERROR
} /* end switch */
/* Close objects */
if(H5Oclose(obj1_id) < 0) TEST_ERROR
if(H5Oclose(obj2_id) < 0) TEST_ERROR
/* Get regions for referenced datasets */
if((obj1_sid = H5Rget_region(parent1, H5R_DATASET_REGION, ref_buf1)) < 0) TEST_ERROR
if((obj2_sid = H5Rget_region(parent2, H5R_DATASET_REGION, ref_buf2)) < 0) TEST_ERROR
/* Check if dataspaces are the same shape */
if(H5S_select_shape_same_test(obj1_sid, obj2_sid) < 0) TEST_ERROR
/* Close dataspaces */
if(H5Sclose(obj1_sid) < 0) TEST_ERROR
if(H5Sclose(obj2_sid) < 0) TEST_ERROR
} /* end for */
} /* end if */
else
TEST_ERROR
} /* end else */
else
if(HDmemcmp(buf1, buf2, (elmt_size * nelmts))) TEST_ERROR
/* Data should be the same. :-) */
return TRUE;
error:
return FALSE;
} /* end compare_data() */
/*-------------------------------------------------------------------------
* Function: compare_datasets
*
* Purpose: Compare two datasets to check that they are equal
*
* Return: TRUE if datasets are equal/FALSE if they are different
*
* Programmer: Quincey Koziol
* Tuesday, October 25, 2005
*
*-------------------------------------------------------------------------
*/
static int
compare_datasets(hid_t did, hid_t did2, hid_t pid, const void *wbuf)
{
hid_t sid = -1, sid2 = -1; /* Dataspace IDs */
hid_t tid = -1, tid2 = -1; /* Datatype IDs */
hid_t dcpl = -1, dcpl2 = -1; /* Dataset creation property list IDs */
size_t elmt_size; /* Size of datatype */
htri_t is_committed; /* If the datatype is committed */
htri_t is_committed2; /* If the datatype is committed */
int ext_count; /* Number of external files in plist */
int nfilters; /* Number of filters applied to dataset */
hssize_t nelmts; /* # of elements in dataspace */
void *rbuf = NULL; /* Buffer for reading raw data */
void *rbuf2 = NULL; /* Buffer for reading raw data */
H5D_space_status_t space_status; /* Dataset's raw data space status */
H5D_space_status_t space_status2; /* Dataset's raw data space status */
/* Check the datatypes are equal */
/* Open the datatype for the source dataset */
if((tid = H5Dget_type(did)) < 0) TEST_ERROR
/* Open the datatype for the destination dataset */
if((tid2 = H5Dget_type(did2)) < 0) TEST_ERROR
/* Check that both datatypes are committed/not committed */
if((is_committed = H5Tcommitted(tid)) < 0) TEST_ERROR
if((is_committed2 = H5Tcommitted(tid2)) < 0) TEST_ERROR
if(is_committed != is_committed2) TEST_ERROR
/* Compare the datatypes */
if(H5Tequal(tid, tid2) != TRUE) TEST_ERROR
/* Determine the size of datatype (for later) */
if((elmt_size = H5Tget_size(tid)) == 0) TEST_ERROR
/* Check the dataspaces are equal */
/* Open the dataspace for the source dataset */
if((sid = H5Dget_space(did)) < 0) TEST_ERROR
/* Open the dataspace for the destination dataset */
if((sid2 = H5Dget_space(did2)) < 0) TEST_ERROR
/* Compare the dataspaces */
if(H5Sextent_equal(sid, sid2) != TRUE) TEST_ERROR
/* Determine the number of elements in dataspace (for later) */
if((nelmts = H5Sget_simple_extent_npoints(sid)) < 0) TEST_ERROR
/* Check the dataset creation property lists are equal */
/* Open the dataset creation property list for the source dataset */
if((dcpl = H5Dget_create_plist(did)) < 0) TEST_ERROR
/* Open the dataset creation property list for the destination dataset */
if((dcpl2 = H5Dget_create_plist(did2)) < 0) TEST_ERROR
/* If external file storage is being used, the value stored in the
* dcpl will be a heap ID, which is not guaranteed to be the same in
* source and destination files.
* Instead, compare the actual external file values and then
* delete this property from the dcpls before comparing them.
*/
if((ext_count = H5Pget_external_count(dcpl)) < 0) TEST_ERROR
if(ext_count > 0)
{
unsigned x; /* Counter varaible */
char name1[NAME_BUF_SIZE];
char name2[NAME_BUF_SIZE];
off_t offset1=0;
off_t offset2=0;
hsize_t size1=0;
hsize_t size2=0;
if(H5Pget_external_count(dcpl2) != ext_count) TEST_ERROR
/* Ensure that all external file information is the same */
for(x=0; x < (unsigned) ext_count; ++x)
{
if(H5Pget_external(dcpl, x, NAME_BUF_SIZE, name1, &offset1, &size1) < 0) TEST_ERROR
if(H5Pget_external(dcpl2, x, NAME_BUF_SIZE, name2, &offset2, &size2) < 0) TEST_ERROR
if(offset1 != offset2) TEST_ERROR
if(size1 != size2) TEST_ERROR
if(strcmp(name1, name2) != 0) TEST_ERROR
}
/* Remove external file information from the dcpls */
/* Remove default property causes memory leak
if(H5Premove(dcpl, H5D_CRT_EXT_FILE_LIST_NAME) < 0) TEST_ERROR
if(H5Premove(dcpl2, H5D_CRT_EXT_FILE_LIST_NAME) < 0) TEST_ERROR
*/
/* reset external file information from the dcpls */
if (H5P_reset_external_file_test(dcpl) < 0) TEST_ERROR
if (H5P_reset_external_file_test(dcpl2) < 0) TEST_ERROR
}
/* Compare the rest of the dataset creation property lists */
if(H5Pequal(dcpl, dcpl2) != TRUE) TEST_ERROR
/* Get the number of filters on dataset */
if((nfilters = H5Pget_nfilters(dcpl)) < 0) TEST_ERROR
/* close the source dataset creation property list */
if(H5Pclose(dcpl) < 0) TEST_ERROR
/* close the destination dataset creation property list */
if(H5Pclose(dcpl2) < 0) TEST_ERROR
/* Check the allocated storage is the same */
/* Check that the space allocation status is the same */
if(H5Dget_space_status(did, &space_status) < 0) TEST_ERROR
if(H5Dget_space_status(did2, &space_status2) < 0) TEST_ERROR
if(space_status != space_status2) TEST_ERROR
/* Check that the space used is the same */
/* (Don't check if the dataset is filtered (i.e. compressed, etc.) and
* the datatype is VLEN, since the addresses for the vlen
* data in each dataset will (probably) be different and the storage
* size will thus vary)
*/
if(!(nfilters > 0 && H5Tdetect_class(tid, H5T_VLEN))) {
hsize_t storage_size = H5Dget_storage_size(did); /* Dataset's raw data storage size */
hsize_t storage_size2 = H5Dget_storage_size(did2); /* 2nd Dataset's raw data storage size */
if(storage_size != storage_size2) TEST_ERROR
} /* end if */
/* Check the raw data is equal */
/* Allocate & initialize space for the raw data buffers */
if((rbuf = HDcalloc( elmt_size, (size_t)nelmts)) == NULL) TEST_ERROR
if((rbuf2 = HDcalloc( elmt_size, (size_t)nelmts)) == NULL) TEST_ERROR
/* Read data from datasets */
if(H5Dread(did, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, rbuf) < 0) TEST_ERROR
if(H5Dread(did2, tid2, H5S_ALL, H5S_ALL, H5P_DEFAULT, rbuf2) < 0) TEST_ERROR
/* Check raw data read in against data written out */
if(wbuf) {
if(!compare_data(did, 0, pid, tid, (size_t)nelmts, wbuf, rbuf, did)) TEST_ERROR
if(!compare_data(did2, 0, pid, tid2, (size_t)nelmts, wbuf, rbuf2, did2)) TEST_ERROR
} /* end if */
/* Don't have written data, just compare data between the two datasets */
else
if(!compare_data(did, did2, pid, tid, (size_t)nelmts, rbuf, rbuf2, did)) TEST_ERROR
/* Reclaim vlen data, if necessary */
if(H5Tdetect_class(tid, H5T_VLEN) == TRUE)
if(H5Dvlen_reclaim(tid, sid, H5P_DEFAULT, rbuf) < 0) TEST_ERROR
if(H5Tdetect_class(tid2, H5T_VLEN) == TRUE)
if(H5Dvlen_reclaim(tid2, sid2, H5P_DEFAULT, rbuf2) < 0) TEST_ERROR
/* Release raw data buffers */
HDfree(rbuf);
HDfree(rbuf2);
/* close the source dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
/* close the destination dataspace */
if(H5Sclose(sid2) < 0) TEST_ERROR
/* close the source datatype */
if(H5Tclose(tid) < 0) TEST_ERROR
/* close the destination datatype */
if(H5Tclose(tid2) < 0) TEST_ERROR
/* Check if the attributes are equal */
if(compare_std_attributes(did, did2, pid) != TRUE) TEST_ERROR
/* Datasets should be the same. :-) */
return TRUE;
error:
H5E_BEGIN_TRY {
if(rbuf)
HDfree(rbuf);
if(rbuf2)
HDfree(rbuf2);
H5Pclose(dcpl2);
H5Pclose(dcpl);
H5Sclose(sid2);
H5Sclose(sid);
H5Tclose(tid2);
H5Tclose(tid);
} H5E_END_TRY;
return FALSE;
} /* end compare_datasets() */
/*-------------------------------------------------------------------------
* Function: compare_groups
*
* Purpose: Compare two groups to check that they are "equal"
*
* Return: TRUE if group are equal/FALSE if they are different
*
* Programmer: Quincey Koziol
* Monday, October 31, 2005
*
*-------------------------------------------------------------------------
*/
static int
compare_groups(hid_t gid, hid_t gid2, hid_t pid, int depth, unsigned copy_flags)
{
H5G_info_t ginfo; /* Group info struct */
H5G_info_t ginfo2; /* Group info struct */
hsize_t idx; /* Index over the objects in group */
unsigned cpy_flags; /* Object copy flags */
/* Retrieve the object copy flags from the property list, if it's non-DEFAULT */
if(pid != H5P_DEFAULT) {
if(H5Pget_copy_object(pid, &cpy_flags) < 0) TEST_ERROR
} /* end if */
else
cpy_flags = 0;
/* Check if both groups have the same # of objects */
if(H5Gget_info(gid, &ginfo) < 0) TEST_ERROR
if(H5Gget_info(gid2, &ginfo2) < 0) TEST_ERROR
if((cpy_flags & H5O_COPY_SHALLOW_HIERARCHY_FLAG) && depth == 0) {
if(ginfo2.nlinks != 0) TEST_ERROR
} /* end if */
else {
if(ginfo.nlinks != ginfo2.nlinks) TEST_ERROR
} /* end if */
/* Check contents of groups */
if(ginfo2.nlinks > 0) {
char objname[NAME_BUF_SIZE]; /* Name of object in group */
char objname2[NAME_BUF_SIZE]; /* Name of object in group */
H5L_info_t linfo; /* Link information */
H5L_info_t linfo2; /* Link information */
/* Loop over contents of groups */
for(idx = 0; idx < ginfo.nlinks; idx++) {
/* Check name of objects */
if(H5Lget_name_by_idx(gid, ".", H5_INDEX_NAME, H5_ITER_INC, idx, objname, (size_t)NAME_BUF_SIZE, H5P_DEFAULT) < 0) TEST_ERROR
if(H5Lget_name_by_idx(gid2, ".", H5_INDEX_NAME, H5_ITER_INC, idx, objname2, (size_t)NAME_BUF_SIZE, H5P_DEFAULT) < 0) TEST_ERROR
if(HDstrcmp(objname, objname2)) TEST_ERROR
/* Get link info */
if(H5Lget_info(gid, objname, &linfo, H5P_DEFAULT) < 0) TEST_ERROR
if(H5Lget_info(gid2, objname2, &linfo2, H5P_DEFAULT) < 0) TEST_ERROR
if(linfo.type != linfo2.type) TEST_ERROR
/* Extra checks for "real" objects */
if(linfo.type == H5L_TYPE_HARD) {
hid_t oid, oid2; /* IDs of objects within group */
H5O_info_t oinfo, oinfo2; /* Object info */
/* Compare some pieces of the object info */
if(H5Oget_info_by_name(gid, objname, &oinfo, H5P_DEFAULT) < 0) TEST_ERROR
if(H5Oget_info_by_name(gid2, objname2, &oinfo2, H5P_DEFAULT) < 0) TEST_ERROR
if(oinfo.type != oinfo2.type) TEST_ERROR
if(oinfo.rc != oinfo2.rc) TEST_ERROR
/* If NULL messages are preserved, the number of messages
* should be the same in the destination.
* Otherwise, it should simply be true that the number
* of messages hasn't increased.
*/
if(H5O_COPY_PRESERVE_NULL_FLAG & copy_flags) {
if(oinfo.hdr.nmesgs != oinfo2.hdr.nmesgs)
;
else
if(oinfo.hdr.nmesgs < oinfo2.hdr.nmesgs) TEST_ERROR
}
/* Check for object already having been compared */
if(addr_lookup(&oinfo))
continue;
else
addr_insert(&oinfo);
/* Open objects */
if((oid = H5Oopen(gid, objname, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR
if((oid2 = H5Oopen(gid2, objname2, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR
/* Compare objects within group */
switch(oinfo.type) {
case H5O_TYPE_GROUP:
/* Compare groups */
if(compare_groups(oid, oid2, pid, depth - 1, copy_flags) != TRUE) TEST_ERROR
break;
case H5O_TYPE_DATASET:
/* Compare datasets */
if(compare_datasets(oid, oid2, pid, NULL) != TRUE) TEST_ERROR
break;
case H5O_TYPE_NAMED_DATATYPE:
/* Compare datatypes */
if(H5Tequal(oid, oid2) != TRUE) TEST_ERROR
break;
default:
HDassert(0 && "Unknown type of object");
break;
} /* end switch */
/* Close objects */
if(H5Oclose(oid) < 0) TEST_ERROR
if(H5Oclose(oid2) < 0) TEST_ERROR
} /* end if */
else {
/* Check that both links are the same size */
if(linfo.u.val_size != linfo2.u.val_size) TEST_ERROR
/* Compare link values */
if(linfo.type == H5L_TYPE_SOFT ||
(linfo.type >= H5L_TYPE_UD_MIN && linfo.type <= H5L_TYPE_MAX)) {
char linkval[NAME_BUF_SIZE]; /* Link value */
char linkval2[NAME_BUF_SIZE]; /* Link value */
/* Get link values */
HDassert(linfo.u.val_size <= NAME_BUF_SIZE);
if(H5Lget_val(gid, objname, linkval, (size_t)NAME_BUF_SIZE, H5P_DEFAULT) < 0) TEST_ERROR
if(H5Lget_val(gid2, objname2, linkval2, (size_t)NAME_BUF_SIZE, H5P_DEFAULT) < 0) TEST_ERROR
/* Compare link data */
if(HDmemcmp(linkval, linkval2, linfo.u.val_size)) TEST_ERROR
} /* end else-if */
else {
HDassert(0 && "Unknown type of link");
} /* end else */
} /* end else */
} /* end for */
} /* end if */
/* Check if the attributes are equal */
if(compare_std_attributes(gid, gid2, pid) != TRUE) TEST_ERROR
/* Groups should be the same. :-) */
return TRUE;
error:
H5E_BEGIN_TRY {
} H5E_END_TRY;
return FALSE;
} /* end compare_groups() */
/*-------------------------------------------------------------------------
* Function: test_copy_named_datatype
*
* Purpose: Create name datatype in SRC file and copy it to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Peter Cao
* Friday, September 30, 2005
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
static int
test_copy_named_datatype(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t tid = -1, tid2 = -1; /* Datatype IDs */
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): named datatype");
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* create datatype */
if((tid = H5Tcopy(H5T_NATIVE_INT)) < 0) TEST_ERROR
/* create named datatype */
if((H5Tcommit2(fid_src, NAME_DATATYPE_SIMPLE, tid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* close the datatype */
if(H5Tclose(tid) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* copy the datatype from SRC to DST */
if(H5Ocopy(fid_src, NAME_DATATYPE_SIMPLE, fid_dst, NAME_DATATYPE_SIMPLE, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the datatype for copy */
if((tid = H5Topen2(fid_src, NAME_DATATYPE_SIMPLE, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR
/* open the copied datatype */
if((tid2 = H5Topen2(fid_dst, NAME_DATATYPE_SIMPLE, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR
/* Compare the datatypes */
if(H5Tequal(tid, tid2) != TRUE) TEST_ERROR
/* close the destination datatype */
if(H5Tclose(tid2) < 0) TEST_ERROR
/* close the source datatype */
if(H5Tclose(tid) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Tclose(tid2);
H5Tclose(tid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_named_datatype */
/*-------------------------------------------------------------------------
* Function: test_copy_named_datatype_vl
*
* Purpose: Create name vlen datatype in SRC file and copy it to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Quincey Koziol
* Tuesday, November 22, 2005
*
*-------------------------------------------------------------------------
*/
static int
test_copy_named_datatype_vl(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t tid = -1, tid2 = -1; /* Datatype IDs */
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): named vlen datatype");
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* create datatype */
if((tid = H5Tvlen_create(H5T_NATIVE_INT)) < 0) TEST_ERROR
/* create named datatype */
if((H5Tcommit2(fid_src, NAME_DATATYPE_VL, tid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* close the datatype */
if(H5Tclose(tid) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* copy the datatype from SRC to DST */
if(H5Ocopy(fid_src, NAME_DATATYPE_VL, fid_dst, NAME_DATATYPE_VL, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the datatype for copy */
if((tid = H5Topen2(fid_src, NAME_DATATYPE_VL, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR
/* open the copied datatype */
if((tid2 = H5Topen2(fid_dst, NAME_DATATYPE_VL, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR
/* Compare the datatypes */
if(H5Tequal(tid, tid2) != TRUE) TEST_ERROR
/* close the destination datatype */
if(H5Tclose(tid2) < 0) TEST_ERROR
/* close the source datatype */
if(H5Tclose(tid) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Tclose(tid2);
H5Tclose(tid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_named_datatype_vl */
/*-------------------------------------------------------------------------
* Function: test_copy_named_datatype_vl_vl
*
* Purpose: Create named vlen of vlen datatype in SRC file and copy it to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Quincey Koziol
* Tuesday, November 22, 2005
*
*-------------------------------------------------------------------------
*/
static int
test_copy_named_datatype_vl_vl(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t tid = -1, tid2 = -1; /* Datatype IDs */
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): named nested vlen datatype");
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* create first vlen datatype */
if((tid = H5Tvlen_create(H5T_NATIVE_INT)) < 0) TEST_ERROR
/* create second (nested) vlen datatype */
if((tid2 = H5Tvlen_create(tid)) < 0) TEST_ERROR
/* create named datatype */
if((H5Tcommit2(fid_src, NAME_DATATYPE_VL_VL, tid2, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* close the first datatype */
if(H5Tclose(tid) < 0) TEST_ERROR
/* close the second datatype */
if(H5Tclose(tid2) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* copy the datatype from SRC to DST */
if(H5Ocopy(fid_src, NAME_DATATYPE_VL_VL, fid_dst, NAME_DATATYPE_VL_VL, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the datatype for copy */
if((tid = H5Topen2(fid_src, NAME_DATATYPE_VL_VL, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR
/* open the copied datatype */
if((tid2 = H5Topen2(fid_dst, NAME_DATATYPE_VL_VL, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR
/* Compare the datatypes */
if(H5Tequal(tid, tid2) != TRUE) TEST_ERROR
/* close the destination datatype */
if(H5Tclose(tid2) < 0) TEST_ERROR
/* close the source datatype */
if(H5Tclose(tid) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Tclose(tid2);
H5Tclose(tid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_named_datatype_vl */
/*-------------------------------------------------------------------------
* Function: test_copy_dataset_simple
*
* Purpose: Create a simple dataset in SRC file and copy it to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Peter Cao
* Friday, September 30, 2005
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
static int
test_copy_dataset_simple(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t sid = -1; /* Dataspace ID */
hid_t did = -1, did2 = -1; /* Dataset IDs */
int buf[DIM_SIZE_1][DIM_SIZE_2]; /* Buffer for writing data */
hsize_t dim2d[2]; /* Dataset dimensions */
int i, j; /* local index variables */
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): simple dataset");
/* Initialize write buffer */
for (i=0; i<DIM_SIZE_1; i++)
for (j=0; j<DIM_SIZE_2; j++)
buf[i][j] = 10000 + 100*i+j;
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim2d[0] = DIM_SIZE_1;
dim2d[1] = DIM_SIZE_2;
/* create 2D dataspace */
if((sid = H5Screate_simple(2, dim2d, NULL)) < 0) TEST_ERROR
/* create 2D int dataset at SRC file */
if((did = H5Dcreate2(fid_src, NAME_DATASET_SIMPLE, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* write data into file */
if(H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
/* attach attributes to the dataset */
if(test_copy_attach_attributes(did, H5T_NATIVE_INT) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* copy the dataset from SRC to DST */
if(H5Ocopy(fid_src, NAME_DATASET_SIMPLE, fid_dst, NAME_DATASET_SIMPLE, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the dataset for copy */
if((did = H5Dopen2(fid_src, NAME_DATASET_SIMPLE, H5P_DEFAULT)) < 0) TEST_ERROR
/* open the destination dataset */
if((did2 = H5Dopen2(fid_dst, NAME_DATASET_SIMPLE, H5P_DEFAULT)) < 0) TEST_ERROR
/* Check if the datasets are equal */
if(compare_datasets(did, did2, H5P_DEFAULT, buf) != TRUE) TEST_ERROR
/* close the destination dataset */
if(H5Dclose(did2) < 0) TEST_ERROR
/* close the source dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Dclose(did2);
H5Dclose(did);
H5Sclose(sid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_dataset_simple */
/*-------------------------------------------------------------------------
* Function: test_copy_dataset_simple_samefile
*
* Purpose: Create a simple dataset in SRC file and copy it to SRC file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Neil Fortner
* Thursday, January 15, 2009
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
static int
test_copy_dataset_simple_samefile(hid_t fcpl, hid_t fapl)
{
hid_t fid = -1; /* File ID */
hid_t sid = -1; /* Dataspace ID */
hid_t did = -1, did2 = -1; /* Dataset IDs */
int buf[DIM_SIZE_1][DIM_SIZE_2]; /* Buffer for writing data */
hsize_t dim2d[2]; /* Dataset dimensions */
int i, j; /* local index variables */
char filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): simple dataset within the same file");
/* Initialize write buffer */
for (i=0; i<DIM_SIZE_1; i++)
for (j=0; j<DIM_SIZE_2; j++)
buf[i][j] = 10000 + 100*i+j;
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, filename, sizeof filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid = H5Fcreate(filename, H5F_ACC_TRUNC, fcpl, fapl)) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim2d[0] = DIM_SIZE_1;
dim2d[1] = DIM_SIZE_2;
/* create 2D dataspace */
if((sid = H5Screate_simple(2, dim2d, NULL)) < 0) TEST_ERROR
/* create 2D int dataset at SRC file */
if((did = H5Dcreate2(fid, NAME_DATASET_SIMPLE, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* write data into file */
if(H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
/* attach attributes to the dataset */
if(test_copy_attach_attributes(did, H5T_NATIVE_INT) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid) < 0) TEST_ERROR
/* open the source file with read-write */
if((fid = H5Fopen(filename, H5F_ACC_RDWR, fapl)) < 0) TEST_ERROR
/* copy the dataset from SRC to DST */
if(H5Ocopy(fid, NAME_DATASET_SIMPLE, fid, NAME_DATASET_SIMPLE2, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the dataset for copy */
if((did = H5Dopen2(fid, NAME_DATASET_SIMPLE, H5P_DEFAULT)) < 0) TEST_ERROR
/* open the destination dataset */
if((did2 = H5Dopen2(fid, NAME_DATASET_SIMPLE2, H5P_DEFAULT)) < 0) TEST_ERROR
/* Check if the datasets are equal */
if(compare_datasets(did, did2, H5P_DEFAULT, buf) != TRUE) TEST_ERROR
/* close the destination dataset */
if(H5Dclose(did2) < 0) TEST_ERROR
/* close the source dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Dclose(did2);
H5Dclose(did);
H5Sclose(sid);
H5Fclose(fid);
} H5E_END_TRY;
return 1;
} /* end test_copy_dataset_simple_samefile */
/*-------------------------------------------------------------------------
* Function: test_copy_dataset_simple_empty
*
* Purpose: Create a simple dataset in SRC file and copy it to DST file
* (Note: dataset has no data)
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Quincey Koziol
* Monday, October 31, 2005
*
*-------------------------------------------------------------------------
*/
static int
test_copy_dataset_simple_empty(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t sid = -1; /* Dataspace ID */
hid_t did = -1, did2 = -1; /* Dataset IDs */
hsize_t dim2d[2]; /* Dataset dimensions */
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): empty contiguous dataset");
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim2d[0] = DIM_SIZE_1;
dim2d[1] = DIM_SIZE_2;
/* create 2D dataspace */
if((sid = H5Screate_simple(2, dim2d, NULL)) < 0) TEST_ERROR
/* create 2D int dataset at SRC file */
if((did = H5Dcreate2(fid_src, NAME_DATASET_SIMPLE, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
/* attach attributes to the dataset */
if(test_copy_attach_attributes(did, H5T_NATIVE_INT) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* copy the dataset from SRC to DST */
if(H5Ocopy(fid_src, NAME_DATASET_SIMPLE, fid_dst, NAME_DATASET_SIMPLE, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the dataset for copy */
if((did = H5Dopen2(fid_src, NAME_DATASET_SIMPLE, H5P_DEFAULT)) < 0) TEST_ERROR
/* open the destination dataset */
if((did2 = H5Dopen2(fid_dst, NAME_DATASET_SIMPLE, H5P_DEFAULT)) < 0) TEST_ERROR
/* Check if the datasets are equal */
if(compare_datasets(did, did2, H5P_DEFAULT, NULL) != TRUE) TEST_ERROR
/* close the destination dataset */
if(H5Dclose(did2) < 0) TEST_ERROR
/* close the source dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Dclose(did2);
H5Dclose(did);
H5Sclose(sid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_dataset_simple_empty */
/*-------------------------------------------------------------------------
* Function: test_copy_dataset_compound
*
* Purpose: Create a compound dataset in SRC file and copy it to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Peter Cao
* Friday, September 30, 2005
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
static int
test_copy_dataset_compound(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t sid = -1; /* Dataspace ID */
hid_t tid = -1; /* Datatype ID */
hid_t did = -1, did2 = -1; /* Dataset IDs */
hsize_t dim1d[1]; /* Dataset dimensions */
typedef struct comp_t {
int a;
double d;
} comp_t;
comp_t buf[DIM_SIZE_1]; /* Buffer for writing data */
int i; /* Local index variable */
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): compound dataset");
for (i=0; i<DIM_SIZE_1; i++) {
buf[i].a = i;
buf[i].d = 1./(i+1);
}
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim1d[0] = DIM_SIZE_1;
/* create dataspace */
if((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR
/* create datatype */
if((tid = H5Tcreate (H5T_COMPOUND, sizeof(comp_t))) < 0) TEST_ERROR
if(H5Tinsert(tid, "int_name", HOFFSET(comp_t, a), H5T_NATIVE_INT) < 0) TEST_ERROR
if(H5Tinsert(tid, "double_name", HOFFSET(comp_t, d), H5T_NATIVE_DOUBLE) < 0) TEST_ERROR
/* create dataset */
if((did = H5Dcreate2(fid_src, NAME_DATASET_COMPOUND, tid, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* write data into file */
if(H5Dwrite(did, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
/* close datatype */
if(H5Tclose(tid) < 0) TEST_ERROR
/* attach attributes to the dataset */
if(test_copy_attach_attributes(did, H5T_NATIVE_INT) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* copy the dataset from SRC to DST */
if(H5Ocopy(fid_src, NAME_DATASET_COMPOUND, fid_dst, NAME_DATASET_COMPOUND, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the dataset for copy */
if((did = H5Dopen2(fid_src, NAME_DATASET_COMPOUND, H5P_DEFAULT)) < 0) TEST_ERROR
/* open the destination dataset */
if((did2 = H5Dopen2(fid_dst, NAME_DATASET_COMPOUND, H5P_DEFAULT)) < 0) TEST_ERROR
/* Check if the datasets are equal */
if(compare_datasets(did, did2, H5P_DEFAULT, buf) != TRUE) TEST_ERROR
/* close the destination dataset */
if(H5Dclose(did2) < 0) TEST_ERROR
/* close the source dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Dclose(did2);
H5Dclose(did);
H5Tclose(tid);
H5Sclose(sid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_dataset_compound */
/*-------------------------------------------------------------------------
* Function: test_copy_dataset_chunked
*
* Purpose: Create a chunked dataset in SRC file and copy it to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Peter Cao
* Friday, September 30, 2005
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
static int
test_copy_dataset_chunked(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t sid = -1; /* Dataspace ID */
hid_t pid = -1; /* Dataset creation property list ID */
hid_t did = -1, did2 = -1; /* Dataset IDs */
hsize_t dim1d[1]; /* Dataset dimensions */
hsize_t max_dim1d[1]; /* Dataset max. dimensions */
hsize_t dim2d[2]; /* Dataset dimensions */
hsize_t chunk_dim1d[1] ={CHUNK_SIZE_1}; /* Chunk dimensions */
hsize_t chunk_dim2d[2] ={CHUNK_SIZE_1, CHUNK_SIZE_2}; /* Chunk dimensions */
float buf1d[DIM_SIZE_1]; /* Buffer for writing data */
float buf2d[DIM_SIZE_1][DIM_SIZE_2]; /* Buffer for writing data */
int i, j; /* Local index variables */
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): chunked dataset");
/* set initial data values */
for(i = 0; i < DIM_SIZE_1; i++) {
buf1d[i] = (float)(i / 2.0);
for(j = 0; j < DIM_SIZE_2; j++)
buf2d[i][j] = (float)(i + (j / 100.0));
} /* end for */
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* Set 1-D dataspace dimensions */
dim1d[0] = DIM_SIZE_1;
max_dim1d[0] = H5S_UNLIMITED;
/* create 1-D dataspace */
if((sid = H5Screate_simple(1, dim1d, max_dim1d)) < 0) TEST_ERROR
/* create and set chunk plist */
if((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR
if(H5Pset_chunk(pid, 1, chunk_dim1d) < 0) TEST_ERROR
/* create dataset */
if((did = H5Dcreate2(fid_src, NAME_DATASET_CHUNKED, H5T_NATIVE_FLOAT, sid, H5P_DEFAULT, pid, H5P_DEFAULT)) < 0) TEST_ERROR
/* close chunk plist */
if(H5Pclose(pid) < 0) TEST_ERROR
/* write data into file */
if(H5Dwrite(did, H5T_NATIVE_FLOAT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf1d) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
/* attach attributes to the dataset */
if(test_copy_attach_attributes(did, H5T_NATIVE_INT) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* Set 2-D dataspace dimensions */
dim2d[0] = DIM_SIZE_1;
dim2d[1] = DIM_SIZE_2;
/* create 2-D dataspace */
if((sid = H5Screate_simple(2, dim2d, NULL)) < 0) TEST_ERROR
/* create and set chunk plist */
if((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR
if(H5Pset_chunk(pid, 2, chunk_dim2d) < 0) TEST_ERROR
/* create dataset */
if((did = H5Dcreate2(fid_src, NAME_DATASET_CHUNKED2, H5T_NATIVE_FLOAT, sid, H5P_DEFAULT, pid, H5P_DEFAULT)) < 0) TEST_ERROR
/* close chunk plist */
if(H5Pclose(pid) < 0) TEST_ERROR
/* write data into file */
if(H5Dwrite(did, H5T_NATIVE_FLOAT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf2d) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
/* attach attributes to the dataset */
if(test_copy_attach_attributes(did, H5T_NATIVE_INT) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* copy the datasets from SRC to DST */
if(H5Ocopy(fid_src, NAME_DATASET_CHUNKED, fid_dst, NAME_DATASET_CHUNKED, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
if(H5Ocopy(fid_src, NAME_DATASET_CHUNKED2, fid_dst, NAME_DATASET_CHUNKED2, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the dataset for copy */
if((did = H5Dopen2(fid_src, NAME_DATASET_CHUNKED, H5P_DEFAULT)) < 0) TEST_ERROR
/* open the 1-D destination dataset */
if((did2 = H5Dopen2(fid_dst, NAME_DATASET_CHUNKED, H5P_DEFAULT)) < 0) TEST_ERROR
/* Check if the datasets are equal */
if(compare_datasets(did, did2, H5P_DEFAULT, buf1d) != TRUE) TEST_ERROR
/* close the destination dataset */
if(H5Dclose(did2) < 0) TEST_ERROR
/* close the source dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* open the 2-D dataset for copy */
if((did = H5Dopen2(fid_src, NAME_DATASET_CHUNKED2, H5P_DEFAULT)) < 0) TEST_ERROR
/* open the destination dataset */
if((did2 = H5Dopen2(fid_dst, NAME_DATASET_CHUNKED2, H5P_DEFAULT)) < 0) TEST_ERROR
/* Check if the datasets are equal */
if(compare_datasets(did, did2, H5P_DEFAULT, buf2d) != TRUE) TEST_ERROR
/* close the destination dataset */
if(H5Dclose(did2) < 0) TEST_ERROR
/* close the source dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Dclose(did2);
H5Dclose(did);
H5Pclose(pid);
H5Sclose(sid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_dataset_chunked */
/*-------------------------------------------------------------------------
* Function: test_copy_dataset_chunked_empty
*
* Purpose: Create a chunked dataset in SRC file and copy it to DST file
* (Note: dataset has no data)
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Quincey Koziol
* Monday, October 31, 2005
*
*-------------------------------------------------------------------------
*/
static int
test_copy_dataset_chunked_empty(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t sid = -1; /* Dataspace ID */
hid_t pid = -1; /* Dataset creation property list ID */
hid_t did = -1, did2 = -1; /* Dataset IDs */
hsize_t dim1d[1]; /* Dataset dimensions */
hsize_t max_dim1d[1]; /* Dataset max. dimensions */
hsize_t dim2d[2]; /* Dataset dimensions */
hsize_t chunk_dim1d[1] ={CHUNK_SIZE_1}; /* Chunk dimensions */
hsize_t chunk_dim2d[2] ={CHUNK_SIZE_1, CHUNK_SIZE_2}; /* Chunk dimensions */
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): empty chunked dataset");
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* Set 1-D dataspace dimensions */
dim1d[0] = DIM_SIZE_1;
max_dim1d[0] = H5S_UNLIMITED;
/* create 1-D dataspace */
if((sid = H5Screate_simple(1, dim1d, max_dim1d)) < 0) TEST_ERROR
/* create and set chunk plist */
if((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR
if(H5Pset_chunk(pid, 1, chunk_dim1d) < 0) TEST_ERROR
/* create dataset */
if((did = H5Dcreate2(fid_src, NAME_DATASET_CHUNKED, H5T_NATIVE_FLOAT, sid, H5P_DEFAULT, pid, H5P_DEFAULT)) < 0) TEST_ERROR
/* close chunk plist */
if(H5Pclose(pid) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
/* attach attributes to the dataset */
if(test_copy_attach_attributes(did, H5T_NATIVE_INT) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* Set 2-D dataspace dimensions */
dim2d[0] = DIM_SIZE_1;
dim2d[1] = DIM_SIZE_2;
/* create 2-D dataspace */
if((sid = H5Screate_simple(2, dim2d, NULL)) < 0) TEST_ERROR
/* create and set chunk plist */
if((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR
if(H5Pset_chunk(pid, 2, chunk_dim2d) < 0) TEST_ERROR
/* create dataset */
if((did = H5Dcreate2(fid_src, NAME_DATASET_CHUNKED2, H5T_NATIVE_FLOAT, sid, H5P_DEFAULT, pid, H5P_DEFAULT)) < 0) TEST_ERROR
/* close chunk plist */
if(H5Pclose(pid) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
/* attach attributes to the dataset */
if(test_copy_attach_attributes(did, H5T_NATIVE_INT) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* copy the datasets from SRC to DST */
if(H5Ocopy(fid_src, NAME_DATASET_CHUNKED, fid_dst, NAME_DATASET_CHUNKED, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
if(H5Ocopy(fid_src, NAME_DATASET_CHUNKED2, fid_dst, NAME_DATASET_CHUNKED2, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the dataset for copy */
if((did = H5Dopen2(fid_src, NAME_DATASET_CHUNKED, H5P_DEFAULT)) < 0) TEST_ERROR
/* open the destination dataset */
if((did2 = H5Dopen2(fid_dst, NAME_DATASET_CHUNKED, H5P_DEFAULT)) < 0) TEST_ERROR
/* Check if the datasets are equal */
if(compare_datasets(did, did2, H5P_DEFAULT, NULL) != TRUE) TEST_ERROR
/* close the destination dataset */
if(H5Dclose(did2) < 0) TEST_ERROR
/* close the source dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* open the dataset for copy */
if((did = H5Dopen2(fid_src, NAME_DATASET_CHUNKED2, H5P_DEFAULT)) < 0) TEST_ERROR
/* open the destination dataset */
if((did2 = H5Dopen2(fid_dst, NAME_DATASET_CHUNKED2, H5P_DEFAULT)) < 0) TEST_ERROR
/* Check if the datasets are equal */
if(compare_datasets(did, did2, H5P_DEFAULT, NULL) != TRUE) TEST_ERROR
/* close the destination dataset */
if(H5Dclose(did2) < 0) TEST_ERROR
/* close the source dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Dclose(did2);
H5Dclose(did);
H5Pclose(pid);
H5Sclose(sid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_dataset_chunked_empty */
/*-------------------------------------------------------------------------
* Function: test_copy_dataset_chunked_sparse
*
* Purpose: Create a chunked dataset with unlimited dimensions and un-written
* chunks in SRC file and copy it to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Quincey Koziol
* Monday, October 31, 2005
*
*-------------------------------------------------------------------------
*/
static int
test_copy_dataset_chunked_sparse(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t sid = -1; /* Dataspace ID */
hid_t pid = -1; /* Dataset creation property list ID */
hid_t did = -1, did2 = -1; /* Dataset IDs */
hsize_t dim1d[1]; /* Dataset dimensions */
hsize_t new_dim1d[1]; /* Dataset dimensions */
hsize_t max_dim1d[1]; /* Dataset max. dimensions */
hsize_t dim2d[2]; /* Dataset dimensions */
hsize_t new_dim2d[2]; /* Dataset dimensions */
hsize_t max_dim2d[2]; /* Dataset max. dimensions */
hsize_t chunk_dim1d[1] = {CHUNK_SIZE_1}; /* Chunk dimensions */
hsize_t chunk_dim2d[2] = {CHUNK_SIZE_1, CHUNK_SIZE_2}; /* Chunk dimensions */
float buf1d[DIM_SIZE_1]; /* Buffer for writing data */
float buf2d[DIM_SIZE_1][DIM_SIZE_2]; /* Buffer for writing data */
int i, j; /* Local index variables */
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): sparse dataset");
/* set initial data values */
for(i = 0; i < DIM_SIZE_1; i++) {
buf1d[i] = (float)(i / 10.0);
for(j = 0; j < DIM_SIZE_2; j++)
buf2d[i][j] = (float)(i + (j / 100.0));
} /* end for */
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* Set 1-D dataspace dimensions */
dim1d[0]=DIM_SIZE_1;
max_dim1d[0]=H5S_UNLIMITED;
/* create 1-D dataspace */
if((sid = H5Screate_simple(1, dim1d, max_dim1d)) < 0) TEST_ERROR
/* create and set chunk plist */
if((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR
if(H5Pset_chunk(pid, 1, chunk_dim1d) < 0) TEST_ERROR
/* create dataset */
if((did = H5Dcreate2(fid_src, NAME_DATASET_CHUNKED, H5T_NATIVE_FLOAT, sid, H5P_DEFAULT, pid, H5P_DEFAULT)) < 0) TEST_ERROR
/* close chunk plist */
if(H5Pclose(pid) < 0) TEST_ERROR
/* write data into file */
if(H5Dwrite(did, H5T_NATIVE_FLOAT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf1d) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
/* Set extended dataset dimensions */
new_dim1d[0] = DIM_SIZE_1 * 2;
/* Extend dataset's dimensions */
if(H5Dset_extent(did, new_dim1d) < 0) TEST_ERROR
/* attach attributes to the dataset */
if(test_copy_attach_attributes(did, H5T_NATIVE_INT) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* Set 2-D dataspace dimensions */
dim2d[0]=DIM_SIZE_1;
dim2d[1]=DIM_SIZE_2;
max_dim2d[0]=H5S_UNLIMITED;
max_dim2d[1]=H5S_UNLIMITED;
/* create 2-D dataspace */
if((sid = H5Screate_simple(2, dim2d, max_dim2d)) < 0) TEST_ERROR
/* create and set chunk plist */
if((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR
if(H5Pset_chunk(pid, 2, chunk_dim2d) < 0) TEST_ERROR
/* create dataset */
if((did = H5Dcreate2(fid_src, NAME_DATASET_CHUNKED2, H5T_NATIVE_FLOAT, sid, H5P_DEFAULT, pid, H5P_DEFAULT)) < 0) TEST_ERROR
/* close chunk plist */
if(H5Pclose(pid) < 0) TEST_ERROR
/* write data into file */
if(H5Dwrite(did, H5T_NATIVE_FLOAT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf2d) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
/* Set extended dataset dimensions */
new_dim2d[0] = DIM_SIZE_1 * 2;
new_dim2d[1] = DIM_SIZE_2 * 2;
/* Extend dataset's dimensions */
if(H5Dset_extent(did, new_dim2d) < 0) TEST_ERROR
/* attach attributes to the dataset */
if(test_copy_attach_attributes(did, H5T_NATIVE_INT) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* copy the datasets from SRC to DST */
if(H5Ocopy(fid_src, NAME_DATASET_CHUNKED, fid_dst, NAME_DATASET_CHUNKED, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
if(H5Ocopy(fid_src, NAME_DATASET_CHUNKED2, fid_dst, NAME_DATASET_CHUNKED2, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the dataset for copy */
if((did = H5Dopen2(fid_src, NAME_DATASET_CHUNKED, H5P_DEFAULT)) < 0) TEST_ERROR
/* open the destination dataset */
if((did2 = H5Dopen2(fid_dst, NAME_DATASET_CHUNKED, H5P_DEFAULT)) < 0) TEST_ERROR
/* Check if the datasets are equal */
if(compare_datasets(did, did2, H5P_DEFAULT, NULL) != TRUE) TEST_ERROR
/* close the destination dataset */
if(H5Dclose(did2) < 0) TEST_ERROR
/* close the source dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* open the dataset for copy */
if((did = H5Dopen2(fid_src, NAME_DATASET_CHUNKED2, H5P_DEFAULT)) < 0) TEST_ERROR
/* open the destination dataset */
if((did2 = H5Dopen2(fid_dst, NAME_DATASET_CHUNKED2, H5P_DEFAULT)) < 0) TEST_ERROR
/* Check if the datasets are equal */
if(compare_datasets(did, did2, H5P_DEFAULT, NULL) != TRUE) TEST_ERROR
/* close the destination dataset */
if(H5Dclose(did2) < 0) TEST_ERROR
/* close the source dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Dclose(did2);
H5Dclose(did);
H5Pclose(pid);
H5Sclose(sid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_dataset_chunked_sparse */
/*-------------------------------------------------------------------------
* Function: test_copy_dataset_compressed
*
* Purpose: Create a compressed, chunked dataset in SRC file and copy it to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Quincey Koziol
* Monday, October 31, 2005
*
*-------------------------------------------------------------------------
*/
static int
test_copy_dataset_compressed(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
#ifdef H5_HAVE_FILTER_DEFLATE
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t sid = -1; /* Dataspace ID */
hid_t pid = -1; /* Dataset creation property list ID */
hid_t did = -1, did2 = -1; /* Dataset IDs */
hsize_t dim2d[2]; /* Dataset dimensions */
hsize_t chunk_dim2d[2] ={CHUNK_SIZE_1, CHUNK_SIZE_2}; /* Chunk dimensions */
float buf[DIM_SIZE_1][DIM_SIZE_2]; /* Buffer for writing data */
int i, j; /* Local index variables */
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
#endif /* H5_HAVE_FILTER_DEFLATE */
TESTING("H5Ocopy(): compressed dataset");
#ifndef H5_HAVE_FILTER_DEFLATE
SKIPPED();
puts(" Deflation filter not available");
#else /* H5_HAVE_FILTER_DEFLATE */
/* set initial data values */
for (i=0; i<DIM_SIZE_1; i++)
for (j=0; j<DIM_SIZE_2; j++)
buf[i][j] = (float)(100.0); /* Something easy to compress */
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim2d[0]=DIM_SIZE_1;
dim2d[1]=DIM_SIZE_2;
/* create dataspace */
if((sid = H5Screate_simple(2, dim2d, NULL)) < 0) TEST_ERROR
/* create and set comp & chunk plist */
if((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR
if(H5Pset_chunk(pid, 2, chunk_dim2d) < 0) TEST_ERROR
if(H5Pset_deflate(pid, 9) < 0) TEST_ERROR
/* create dataset */
if((did = H5Dcreate2(fid_src, NAME_DATASET_CHUNKED, H5T_NATIVE_FLOAT, sid, H5P_DEFAULT, pid, H5P_DEFAULT)) < 0) TEST_ERROR
/* close chunk plist */
if(H5Pclose(pid) < 0) TEST_ERROR
/* write data into file */
if(H5Dwrite(did, H5T_NATIVE_FLOAT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
/* attach attributes to the dataset */
if(test_copy_attach_attributes(did, H5T_NATIVE_INT) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* copy the dataset from SRC to DST */
if(H5Ocopy(fid_src, NAME_DATASET_CHUNKED, fid_dst, NAME_DATASET_CHUNKED, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the dataset for copy */
if((did = H5Dopen2(fid_src, NAME_DATASET_CHUNKED, H5P_DEFAULT)) < 0) TEST_ERROR
/* open the destination dataset */
if((did2 = H5Dopen2(fid_dst, NAME_DATASET_CHUNKED, H5P_DEFAULT)) < 0) TEST_ERROR
/* Check if the datasets are equal */
if(compare_datasets(did, did2, H5P_DEFAULT, NULL) != TRUE) TEST_ERROR
/* close the destination dataset */
if(H5Dclose(did2) < 0) TEST_ERROR
/* close the source dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
PASSED();
#endif /* H5_HAVE_FILTER_DEFLATE */
return 0;
#ifdef H5_HAVE_FILTER_DEFLATE
error:
H5E_BEGIN_TRY {
H5Dclose(did2);
H5Dclose(did);
H5Pclose(pid);
H5Sclose(sid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
#endif /* H5_HAVE_FILTER_DEFLATE */
} /* end test_copy_dataset_compressed */
/*-------------------------------------------------------------------------
* Function: test_copy_dataset_compact
*
* Purpose: Create a compact dataset in SRC file and copy it to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Quincey Koziol
* Monday, October 31, 2005
*
*-------------------------------------------------------------------------
*/
static int
test_copy_dataset_compact(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t sid = -1; /* Dataspace ID */
hid_t pid = -1; /* Dataset creation property list ID */
hid_t did = -1, did2 = -1; /* Dataset IDs */
hsize_t dim2d[2]; /* Dataset dimensions */
float buf[DIM_SIZE_1][DIM_SIZE_2]; /* Buffer for writing data */
int i, j; /* Local index variables */
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): compact dataset");
/* set initial data values */
for (i=0; i<DIM_SIZE_1; i++)
for (j=0; j<DIM_SIZE_2; j++)
buf[i][j] = (float)(i+j/100.0);
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim2d[0]=DIM_SIZE_1;
dim2d[1]=DIM_SIZE_2;
/* create dataspace */
if((sid = H5Screate_simple(2, dim2d, NULL)) < 0) TEST_ERROR
/* create and set compact plist */
if((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR
if(H5Pset_layout(pid, H5D_COMPACT) < 0) TEST_ERROR
/* create dataset */
if((did = H5Dcreate2(fid_src, NAME_DATASET_COMPACT, H5T_NATIVE_FLOAT, sid, H5P_DEFAULT, pid, H5P_DEFAULT)) < 0) TEST_ERROR
/* close chunk plist */
if(H5Pclose(pid) < 0) TEST_ERROR
/* write data into file */
if(H5Dwrite(did, H5T_NATIVE_FLOAT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
/* attach attributes to the dataset */
if(test_copy_attach_attributes(did, H5T_NATIVE_INT) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* copy the dataset from SRC to DST */
if(H5Ocopy(fid_src, NAME_DATASET_COMPACT, fid_dst, NAME_DATASET_COMPACT, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the dataset for copy */
if((did = H5Dopen2(fid_src, NAME_DATASET_COMPACT, H5P_DEFAULT)) < 0) TEST_ERROR
/* open the destination dataset */
if((did2 = H5Dopen2(fid_dst, NAME_DATASET_COMPACT, H5P_DEFAULT)) < 0) TEST_ERROR
/* Check if the datasets are equal */
if(compare_datasets(did, did2, H5P_DEFAULT, buf) != TRUE) TEST_ERROR
/* close the destination dataset */
if(H5Dclose(did2) < 0) TEST_ERROR
/* close the source dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Dclose(did2);
H5Dclose(did);
H5Pclose(pid);
H5Sclose(sid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_dataset_compact */
/*-------------------------------------------------------------------------
* Function: test_copy_dataset_external
*
* Purpose: Create an external dataset in SRC file and copy it to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Peter Cao
* Friday, September 30, 2005
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
static int
test_copy_dataset_external(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t sid = -1; /* Dataspace ID */
hid_t pid = -1; /* Dataset creation property list ID */
hid_t did = -1, did2 = -1; /* Dataset IDs */
int i;
hsize_t size;
hsize_t dim1d[1];
int buf[DIM_SIZE_1];
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): external dataset");
/* set initial data values */
for (i=0; i<DIM_SIZE_1; i++)
buf[i] = i;
/* create an empty external file */
HDfclose(HDfopen (FILE_EXT, "w"));
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim1d[0]=DIM_SIZE_1;
/* create dataspace */
if((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR
/* set dataset creation plist */
size = DIM_SIZE_1 * sizeof (int);
if((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR
if(H5Pset_external(pid, FILE_EXT, (off_t)0, size) < 0) TEST_ERROR
/* create dataset at SRC file */
if((did = H5Dcreate2(fid_src, NAME_DATASET_EXTERNAL, H5T_NATIVE_INT, sid, H5P_DEFAULT, pid, H5P_DEFAULT)) < 0) TEST_ERROR
/* write data into file */
if(H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
/* close external plist */
if(H5Pclose(pid) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* copy the dataset from SRC to DST */
if(H5Ocopy(fid_src, NAME_DATASET_EXTERNAL, fid_dst, NAME_DATASET_EXTERNAL, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the dataset for copy */
if((did = H5Dopen2(fid_src, NAME_DATASET_EXTERNAL, H5P_DEFAULT)) < 0) TEST_ERROR
/* open the destination dataset */
if((did2 = H5Dopen2(fid_dst, NAME_DATASET_EXTERNAL, H5P_DEFAULT)) < 0) TEST_ERROR
/* Check if the datasets are equal */
if(compare_datasets(did, did2, H5P_DEFAULT, buf) != TRUE) TEST_ERROR
/* close the destination dataset */
if(H5Dclose(did2) < 0) TEST_ERROR
/* close the source dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Dclose(did2);
H5Dclose(did);
H5Pclose(pid);
H5Sclose(sid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_dataset_external */
/*-------------------------------------------------------------------------
* Function: test_copy_dataset_named_dtype
*
* Purpose: Create a dataset that uses a named datatype in SRC file and
* copy it to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Quincey Koziol
* Monday, October 31, 2005
*
*-------------------------------------------------------------------------
*/
static int
test_copy_dataset_named_dtype(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t tid = -1; /* Datatype ID */
hid_t sid = -1; /* Dataspace ID */
hid_t did = -1, did2 = -1; /* Dataset IDs */
int i;
hsize_t dim1d[1];
int buf[DIM_SIZE_1];
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): dataset that uses named datatype");
/* set initial data values */
for (i=0; i<DIM_SIZE_1; i++)
buf[i] = i;
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim1d[0]=DIM_SIZE_1;
/* create dataspace */
if((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR
/* create named datatype */
if((tid = H5Tcopy(H5T_NATIVE_INT)) < 0) TEST_ERROR
if((H5Tcommit2(fid_src, NAME_DATATYPE_SIMPLE, tid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* create dataset at SRC file */
if((did = H5Dcreate2(fid_src, NAME_DATASET_NAMED_DTYPE, tid, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* close the datatype */
if(H5Tclose(tid) < 0) TEST_ERROR
/* write data into file */
if(H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* copy the dataset from SRC to DST */
if(H5Ocopy(fid_src, NAME_DATASET_NAMED_DTYPE, fid_dst, NAME_DATASET_NAMED_DTYPE, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the dataset for copy */
if((did = H5Dopen2(fid_src, NAME_DATASET_NAMED_DTYPE, H5P_DEFAULT)) < 0) TEST_ERROR
/* open the destination dataset */
if((did2 = H5Dopen2(fid_dst, NAME_DATASET_NAMED_DTYPE, H5P_DEFAULT)) < 0) TEST_ERROR
/* Check if the datasets are equal */
if(compare_datasets(did, did2, H5P_DEFAULT, buf) != TRUE) TEST_ERROR
/* close the destination dataset */
if(H5Dclose(did2) < 0) TEST_ERROR
/* close the source dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Dclose(did2);
H5Dclose(did);
H5Tclose(tid);
H5Sclose(sid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_dataset_named_dtype */
/*-------------------------------------------------------------------------
* Function: test_copy_dataset_named_dtype_hier
*
* Purpose: Create a hierarchy of datasets that use a named datatype in
* SRC file and copy hierarchy to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Quincey Koziol
* Tuesday, October 31, 2005
*
*-------------------------------------------------------------------------
*/
static int
test_copy_dataset_named_dtype_hier(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t tid = -1; /* Datatype ID */
hid_t sid = -1; /* Dataspace ID */
hid_t did = -1; /* Dataset ID */
hid_t gid = -1, gid2 = -1; /* Group IDs */
int i;
hsize_t dim1d[1];
int buf[DIM_SIZE_1];
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): hier. of datasets using named datatype inside hier.");
/* set initial data values */
for (i=0; i<DIM_SIZE_1; i++)
buf[i] = i;
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* Create group to place all objects in */
if((gid = H5Gcreate2(fid_src, NAME_GROUP_TOP, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim1d[0]=DIM_SIZE_1;
/* create dataspace */
if((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR
/* create named datatype _inside_ hierarchy to copy */
if((tid = H5Tcopy(H5T_NATIVE_INT)) < 0) TEST_ERROR
if((H5Tcommit2(gid, NAME_DATATYPE_SIMPLE, tid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* create first dataset at SRC file */
if((did = H5Dcreate2(gid, NAME_DATASET_NAMED_DTYPE, tid, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* write data into file */
if(H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* create second dataset at SRC file */
if((did = H5Dcreate2(gid, NAME_DATASET_NAMED_DTYPE2, tid, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* write data into file */
if(H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the datatype */
if(H5Tclose(tid) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
/* close group */
if(H5Gclose(gid) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* copy the dataset from SRC to DST */
if(H5Ocopy(fid_src, NAME_GROUP_TOP, fid_dst, NAME_GROUP_TOP, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the group for copy */
if((gid = H5Gopen2(fid_src, NAME_GROUP_TOP, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR
/* open the destination group */
if((gid2 = H5Gopen2(fid_dst, NAME_GROUP_TOP, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR
/* Check if the groups are equal */
if(compare_groups(gid, gid2, H5P_DEFAULT, -1, 0) != TRUE) TEST_ERROR
/* close the destination group */
if(H5Gclose(gid2) < 0) TEST_ERROR
/* close the source group */
if(H5Gclose(gid) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Dclose(did);
H5Tclose(tid);
H5Sclose(sid);
H5Gclose(gid2);
H5Gclose(gid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_dataset_named_dtype_hier */
/*-------------------------------------------------------------------------
* Function: test_copy_dataset_named_dtype_hier_outside
*
* Purpose: Create a hierarchy of datasets that use a named datatype that
* is outside of hierarchy in SRC file and copy hierarchy to DST
* file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Quincey Koziol
* Tuesday, October 31, 2005
*
*-------------------------------------------------------------------------
*/
static int
test_copy_dataset_named_dtype_hier_outside(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t tid = -1; /* Datatype ID */
hid_t sid = -1; /* Dataspace ID */
hid_t did = -1; /* Dataset ID */
hid_t gid = -1, gid2 = -1; /* Group IDs */
int i;
hsize_t dim1d[1];
int buf[DIM_SIZE_1];
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): hier. of datasets using named datatype outside hier.");
/* set initial data values */
for (i=0; i<DIM_SIZE_1; i++)
buf[i] = i;
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* Create group to place all objects in */
if((gid = H5Gcreate2(fid_src, NAME_GROUP_TOP, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim1d[0]=DIM_SIZE_1;
/* create dataspace */
if((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR
/* create named datatype _outside_ hierarchy to copy */
if((tid = H5Tcopy(H5T_NATIVE_INT)) < 0) TEST_ERROR
if((H5Tcommit2(fid_src, NAME_DATATYPE_SIMPLE, tid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* create first dataset at SRC file */
if((did = H5Dcreate2(gid, NAME_DATASET_NAMED_DTYPE, tid, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* write data into file */
if(H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* create second dataset at SRC file */
if((did = H5Dcreate2(gid, NAME_DATASET_NAMED_DTYPE2, tid, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* write data into file */
if(H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the datatype */
if(H5Tclose(tid) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
/* close group */
if(H5Gclose(gid) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* copy the dataset from SRC to DST */
if(H5Ocopy(fid_src, NAME_GROUP_TOP, fid_dst, NAME_GROUP_TOP, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the group for copy */
if((gid = H5Gopen2(fid_src, NAME_GROUP_TOP, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR
/* open the destination group */
if((gid2 = H5Gopen2(fid_dst, NAME_GROUP_TOP, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR
/* Check if the groups are equal */
if(compare_groups(gid, gid2, H5P_DEFAULT, -1, 0) != TRUE) TEST_ERROR
/* close the destination group */
if(H5Gclose(gid2) < 0) TEST_ERROR
/* close the source group */
if(H5Gclose(gid) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Dclose(did);
H5Tclose(tid);
H5Sclose(sid);
H5Gclose(gid2);
H5Gclose(gid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_dataset_named_dtype_hier_outside */
/*-------------------------------------------------------------------------
* Function: test_copy_dataset_multi_ohdr_chunks
*
* Purpose: Create a pair of datasets that add attributes in a way that
* creates lots of object header chunks in SRC file and copy
* datasets to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Quincey Koziol
* Tuesday, October 31, 2005
*
*-------------------------------------------------------------------------
*/
static int
test_copy_dataset_multi_ohdr_chunks(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t sid = -1; /* Dataspace ID */
hid_t did = -1, did2 = -1; /* Dataset IDs */
hid_t gid = -1, gid2 = -1; /* Group IDs */
int i;
hsize_t dim1d[1];
int buf[DIM_SIZE_1];
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): datasets that have multiple ohdr chunks");
/* set initial data values */
for (i=0; i<DIM_SIZE_1; i++)
buf[i] = i;
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* Create group to place all objects in */
if((gid = H5Gcreate2(fid_src, NAME_GROUP_TOP, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim1d[0]=DIM_SIZE_1;
/* create dataspace */
if((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR
/* create first dataset at SRC file */
if((did = H5Dcreate2(gid, NAME_DATASET_MULTI_OHDR, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* write data into file */
if(H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* create second dataset at SRC file */
if((did2 = H5Dcreate2(gid, NAME_DATASET_MULTI_OHDR2, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* write data into file */
if(H5Dwrite(did2, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* Add attributes to datasets in a way that creates lots of chunks */
if(test_copy_attach_paired_attributes(did, did2, H5T_NATIVE_INT) < 0) TEST_ERROR
/* close the first dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the second dataset */
if(H5Dclose(did2) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
/* close group */
if(H5Gclose(gid) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* copy the dataset from SRC to DST */
if(H5Ocopy(fid_src, NAME_GROUP_TOP, fid_dst, NAME_GROUP_TOP, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the group for copy */
if((gid = H5Gopen2(fid_src, NAME_GROUP_TOP, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR
/* open the destination group */
if((gid2 = H5Gopen2(fid_dst, NAME_GROUP_TOP, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR
/* Check if the groups are equal */
if(compare_groups(gid, gid2, H5P_DEFAULT, -1, 0) != TRUE) TEST_ERROR
/* close the destination group */
if(H5Gclose(gid2) < 0) TEST_ERROR
/* close the source group */
if(H5Gclose(gid) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Dclose(did2);
H5Dclose(did);
H5Sclose(sid);
H5Gclose(gid2);
H5Gclose(gid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_dataset_multi_ohdr_chunks */
/*-------------------------------------------------------------------------
* Function: test_copy_dataset_attr_named_dtype
*
* Purpose: Create a pair of datasets that add attributes that use
* named datatypes in SRC file and copy datasets to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Quincey Koziol
* Tuesday, October 31, 2005
*
*-------------------------------------------------------------------------
*/
static int
test_copy_dataset_attr_named_dtype(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t tid = -1; /* Datatype ID */
hid_t sid = -1; /* Dataspace ID */
hid_t did = -1, did2 = -1; /* Dataset IDs */
hid_t gid = -1, gid2 = -1; /* Group IDs */
int i;
hsize_t dim1d[1];
int buf[DIM_SIZE_1];
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): objects with attributes using named datatypes");
/* set initial data values */
for (i=0; i<DIM_SIZE_1; i++)
buf[i] = i;
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* Create group to place all objects in */
if((gid = H5Gcreate2(fid_src, NAME_GROUP_TOP, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim1d[0]=DIM_SIZE_1;
/* create dataspace */
if((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR
/* create named datatype _outside_ hierarchy to copy */
if((tid = H5Tcopy(H5T_NATIVE_INT)) < 0) TEST_ERROR
if((H5Tcommit2(fid_src, NAME_DATATYPE_SIMPLE, tid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* create first dataset at SRC file */
if((did = H5Dcreate2(gid, NAME_DATASET_MULTI_OHDR, tid, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* write data into file */
if(H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* create second dataset at SRC file */
if((did2 = H5Dcreate2(gid, NAME_DATASET_MULTI_OHDR2, tid, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* write data into file */
if(H5Dwrite(did2, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* Add attributes to datasets in a way that creates lots of chunks */
if(test_copy_attach_paired_attributes(did, did2, tid) < 0) TEST_ERROR
/* close the datatype */
if(H5Tclose(tid) < 0) TEST_ERROR
/* close the first dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the second dataset */
if(H5Dclose(did2) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
/* close group */
if(H5Gclose(gid) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* copy the dataset from SRC to DST */
if(H5Ocopy(fid_src, NAME_GROUP_TOP, fid_dst, NAME_GROUP_TOP, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the group for copy */
if((gid = H5Gopen2(fid_src, NAME_GROUP_TOP, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR
/* open the destination group */
if((gid2 = H5Gopen2(fid_dst, NAME_GROUP_TOP, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR
/* Check if the groups are equal */
if(compare_groups(gid, gid2, H5P_DEFAULT, -1, 0) != TRUE) TEST_ERROR
/* close the destination group */
if(H5Gclose(gid2) < 0) TEST_ERROR
/* close the source group */
if(H5Gclose(gid) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Dclose(did2);
H5Dclose(did);
H5Tclose(tid);
H5Sclose(sid);
H5Gclose(gid2);
H5Gclose(gid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_dataset_attr_named_dtype */
/*-------------------------------------------------------------------------
* Function: test_copy_dataset_contig_vl
*
* Purpose: Create a contiguous dataset w/VLEN datatype in SRC
* file and copy it to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Peter Cao
* Friday, September 30, 2005
*
*-------------------------------------------------------------------------
*/
static int
test_copy_dataset_contig_vl(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t tid = -1; /* Datatype ID */
hid_t sid = -1; /* Dataspace ID */
hid_t did = -1, did2 = -1; /* Dataset IDs */
unsigned int i, j; /* Local index variables */
hsize_t dim1d[1]; /* Dataset dimensions */
hvl_t buf[DIM_SIZE_1]; /* Buffer for writing data */
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): contiguous dataset with VLEN datatype");
/* set initial data values */
for(i = 0; i < DIM_SIZE_1; i++) {
buf[i].len = i+1;
buf[i].p = (int *)HDmalloc(buf[i].len * sizeof(int));
for(j = 0; j < buf[i].len; j++)
((int *)buf[i].p)[j] = (int)(i * 10 + j);
} /* end for */
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim1d[0]=DIM_SIZE_1;
/* create dataspace */
if((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR
/* create datatype */
if((tid = H5Tvlen_create(H5T_NATIVE_INT)) < 0) TEST_ERROR
/* create dataset at SRC file */
if((did = H5Dcreate2(fid_src, NAME_DATASET_VL, tid, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* write data into file */
if(H5Dwrite(did, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* copy the dataset from SRC to DST */
if(H5Ocopy(fid_src, NAME_DATASET_VL, fid_dst, NAME_DATASET_VL, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the dataset for copy */
if((did = H5Dopen2(fid_src, NAME_DATASET_VL, H5P_DEFAULT)) < 0) TEST_ERROR
/* open the destination dataset */
if((did2 = H5Dopen2(fid_dst, NAME_DATASET_VL, H5P_DEFAULT)) < 0) TEST_ERROR
/* Check if the datasets are equal */
if(compare_datasets(did, did2, H5P_DEFAULT, buf) != TRUE) TEST_ERROR
/* close the destination dataset */
if(H5Dclose(did2) < 0) TEST_ERROR
/* close the source dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
/* Reclaim vlen buffer */
if(H5Dvlen_reclaim(tid, sid, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close datatype */
if(H5Tclose(tid) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Dclose(did2);
H5Dclose(did);
H5Dvlen_reclaim(tid, sid, H5P_DEFAULT, buf);
H5Tclose(tid);
H5Sclose(sid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_dataset_contig_vl */
/*-------------------------------------------------------------------------
* Function: test_copy_dataset_chunked_vl
*
* Purpose: Create a chunked dataset w/VLEN datatype in SRC
* file and copy it to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Peter Cao
* Saturday, December 10, 2005
*
*-------------------------------------------------------------------------
*/
static int
test_copy_dataset_chunked_vl(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t tid = -1; /* Datatype ID */
hid_t sid = -1; /* Dataspace ID */
hid_t pid = -1; /* Dataset creation property list ID */
hid_t did = -1, did2 = -1; /* Dataset IDs */
unsigned int i, j; /* Local index variables */
hsize_t dim1d[1]; /* Dataset dimensions */
hsize_t chunk_dim1d[1] = {CHUNK_SIZE_1}; /* Chunk dimensions */
hvl_t buf[DIM_SIZE_1]; /* Buffer for writing data */
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): chunked dataset with VLEN datatype");
/* set initial data values */
for(i = 0; i < DIM_SIZE_1; i++) {
buf[i].len = i+1;
buf[i].p = (int *)HDmalloc(buf[i].len * sizeof(int));
for(j = 0; j < buf[i].len; j++)
((int *)buf[i].p)[j] = (int)(i * 10 + j);
} /* end for */
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim1d[0]=DIM_SIZE_1;
/* create dataspace */
if((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR
/* create datatype */
if((tid = H5Tvlen_create(H5T_NATIVE_INT)) < 0) TEST_ERROR
/* create and set chunk plist */
if((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR
if(H5Pset_chunk(pid, 1, chunk_dim1d) < 0) TEST_ERROR
/* create dataset at SRC file */
if((did = H5Dcreate2(fid_src, NAME_DATASET_VL, tid, sid, H5P_DEFAULT, pid, H5P_DEFAULT)) < 0) TEST_ERROR
/* close chunk plist */
if(H5Pclose(pid) < 0) TEST_ERROR
/* write data into file */
if(H5Dwrite(did, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* copy the dataset from SRC to DST */
if(H5Ocopy(fid_src, NAME_DATASET_VL, fid_dst, NAME_DATASET_VL, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the dataset for copy */
if((did = H5Dopen2(fid_src, NAME_DATASET_VL, H5P_DEFAULT)) < 0) TEST_ERROR
/* open the destination dataset */
if((did2 = H5Dopen2(fid_dst, NAME_DATASET_VL, H5P_DEFAULT)) < 0) TEST_ERROR
/* Check if the datasets are equal */
if(compare_datasets(did, did2, H5P_DEFAULT, buf) != TRUE) TEST_ERROR
/* close the destination dataset */
if(H5Dclose(did2) < 0) TEST_ERROR
/* close the source dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
/* Reclaim vlen buffer */
if(H5Dvlen_reclaim(tid, sid, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close datatype */
if(H5Tclose(tid) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Dclose(did2);
H5Dclose(did);
H5Dvlen_reclaim(tid, sid, H5P_DEFAULT, buf);
H5Tclose(tid);
H5Sclose(sid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_dataset_chunked_vl */
/*-------------------------------------------------------------------------
* Function: test_copy_dataset_compact_vl
*
* Purpose: Create a compact dataset w/VLEN datatype in SRC
* file and copy it to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Peter Cao
* Sunday, December 11, 2005
*
*-------------------------------------------------------------------------
*/
static int
test_copy_dataset_compact_vl(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t tid = -1; /* Datatype ID */
hid_t sid = -1; /* Dataspace ID */
hid_t pid = -1; /* Dataset creation property list ID */
hid_t did = -1, did2 = -1; /* Dataset IDs */
unsigned int i, j; /* Local index variables */
hsize_t dim1d[1]; /* Dataset dimensions */
hvl_t buf[DIM_SIZE_1]; /* Buffer for writing data */
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): compact dataset with VLEN datatype");
/* set initial data values */
for(i = 0; i < DIM_SIZE_1; i++) {
buf[i].len = i+1;
buf[i].p = (int *)HDmalloc(buf[i].len * sizeof(int));
for(j = 0; j < buf[i].len; j++)
((int *)buf[i].p)[j] = (int)(i * 10 + j);
} /* end for */
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim1d[0]=DIM_SIZE_1;
/* create dataspace */
if((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR
/* create datatype */
if((tid = H5Tvlen_create(H5T_NATIVE_INT)) < 0) TEST_ERROR
/* create and set compact plist */
if((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR
if(H5Pset_layout(pid, H5D_COMPACT) < 0) TEST_ERROR
/* create dataset at SRC file */
if((did = H5Dcreate2(fid_src, NAME_DATASET_VL, tid, sid, H5P_DEFAULT, pid, H5P_DEFAULT)) < 0) TEST_ERROR
/* write data into file */
if(H5Dwrite(did, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close compact plist */
if(H5Pclose(pid) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* copy the dataset from SRC to DST */
if(H5Ocopy(fid_src, NAME_DATASET_VL, fid_dst, NAME_DATASET_VL, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the dataset for copy */
if((did = H5Dopen2(fid_src, NAME_DATASET_VL, H5P_DEFAULT)) < 0) TEST_ERROR
/* open the destination dataset */
if((did2 = H5Dopen2(fid_dst, NAME_DATASET_VL, H5P_DEFAULT)) < 0) TEST_ERROR
/* Check if the datasets are equal */
if(compare_datasets(did, did2, H5P_DEFAULT, buf) != TRUE) TEST_ERROR
/* close the destination dataset */
if(H5Dclose(did2) < 0) TEST_ERROR
/* close the source dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
/* Reclaim vlen buffer */
if(H5Dvlen_reclaim(tid, sid, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close datatype */
if(H5Tclose(tid) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Dclose(did2);
H5Dclose(did);
H5Dvlen_reclaim(tid, sid, H5P_DEFAULT, buf);
H5Tclose(tid);
H5Sclose(sid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_dataset_compact_vl */
/*-------------------------------------------------------------------------
* Function: test_copy_attribute_vl
*
* Purpose: Create a simple dataset with vlen attributes in SRC file
* and copy it to DST file (Note: dataset has no data)
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Peter Cao
* Saturday, December , 2005
*
*-------------------------------------------------------------------------
*/
static int
test_copy_attribute_vl(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t sid = -1; /* Dataspace ID */
hid_t did = -1, did2 = -1; /* Dataset IDs */
hid_t aid = -1, aid2 = -1; /* Attribute IDs */
hsize_t dim2d[2]; /* Dataset dimensions */
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): variable length attribute");
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim2d[0] = DIM_SIZE_1;
dim2d[1] = DIM_SIZE_2;
/* create 2D dataspace */
if((sid = H5Screate_simple(2, dim2d, NULL)) < 0) TEST_ERROR
/* create 2D int dataset at SRC file */
if((did = H5Dcreate2(fid_src, NAME_DATASET_SIMPLE, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
/* attach VL attribute to the dataset */
if(test_copy_attach_attribute_vl(did) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* copy the dataset from SRC to DST */
if(H5Ocopy(fid_src, NAME_DATASET_SIMPLE, fid_dst, NAME_DATASET_SIMPLE, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the dataset for copy */
if((did = H5Dopen2(fid_src, NAME_DATASET_SIMPLE, H5P_DEFAULT)) < 0) TEST_ERROR
/* open the destination dataset */
if((did2 = H5Dopen2(fid_dst, NAME_DATASET_SIMPLE, H5P_DEFAULT)) < 0) TEST_ERROR
/* Check if the attributes are equal */
if((aid = H5Aopen_by_idx(did, ".", H5_INDEX_CRT_ORDER, H5_ITER_INC, (hsize_t)0, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
if((aid2 = H5Aopen_by_idx(did2, ".", H5_INDEX_CRT_ORDER, H5_ITER_INC, (hsize_t)0, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
if(compare_attribute(aid, aid2, H5P_DEFAULT, NULL, did) != TRUE) TEST_ERROR
if(H5Aclose(aid) < 0) TEST_ERROR
if(H5Aclose(aid2) < 0) TEST_ERROR
/* close the destination dataset */
if(H5Dclose(did2) < 0) TEST_ERROR
/* close the source dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Aclose(aid2);
H5Aclose(aid);
H5Dclose(did2);
H5Dclose(did);
H5Sclose(sid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_dataset_simple_empty */
/*-------------------------------------------------------------------------
* Function: test_copy_dataset_compressed_vl
*
* Purpose: Create a compressed, chunked, VLEN dataset in SRC
* file and copy it to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Peter Cao
* Tuesday, December 27, 2005
*
*-------------------------------------------------------------------------
*/
static int
test_copy_dataset_compressed_vl(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
#ifdef H5_HAVE_FILTER_DEFLATE
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t sid = -1; /* Dataspace ID */
hid_t tid = -1; /* Datatype ID */
hid_t pid = -1; /* Dataset creation property list ID */
hid_t did = -1, did2 = -1; /* Dataset IDs */
hsize_t dim2d[2]; /* Dataset dimensions */
hsize_t chunk_dim2d[2] ={CHUNK_SIZE_1, CHUNK_SIZE_2}; /* Chunk dimensions */
hvl_t buf[DIM_SIZE_1][DIM_SIZE_2]; /* Buffer for writing data */
int i, j, k; /* Local index variables */
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
#endif /* H5_HAVE_FILTER_DEFLATE */
TESTING("H5Ocopy(): compressed dataset with VLEN datatype");
#ifndef H5_HAVE_FILTER_DEFLATE
SKIPPED();
puts(" Deflation filter not available");
#else /* H5_HAVE_FILTER_DEFLATE */
/* set initial data values */
for (i = 0; i < DIM_SIZE_1; i++) {
for (j = 0; j < DIM_SIZE_2; j++) {
buf[i][j].len = (size_t)(j + 1);
buf[i][j].p = (int *)HDmalloc(buf[i][j].len * sizeof(int));
for (k = 0; k < (int)buf[i][j].len; k++)
((int *)buf[i][j].p)[k] = i * 10000 + j * 100 + k;
}
}
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim2d[0]=DIM_SIZE_1;
dim2d[1]=DIM_SIZE_2;
/* create dataspace */
if((sid = H5Screate_simple(2, dim2d, NULL)) < 0) TEST_ERROR
/* create datatype */
if((tid = H5Tvlen_create(H5T_NATIVE_INT)) < 0) TEST_ERROR
/* create and set comp & chunk plist */
if((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR
if(H5Pset_chunk(pid, 2, chunk_dim2d) < 0) TEST_ERROR
if(H5Pset_deflate(pid, 9) < 0) TEST_ERROR
/* create dataset */
if((did = H5Dcreate2(fid_src, NAME_DATASET_CHUNKED, tid, sid, H5P_DEFAULT, pid, H5P_DEFAULT)) < 0) TEST_ERROR
/* close chunk plist */
if(H5Pclose(pid) < 0) TEST_ERROR
/* write data into file */
if(H5Dwrite(did, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* copy the dataset from SRC to DST */
if(H5Ocopy(fid_src, NAME_DATASET_CHUNKED, fid_dst, NAME_DATASET_CHUNKED, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the dataset for copy */
if((did = H5Dopen2(fid_src, NAME_DATASET_CHUNKED, H5P_DEFAULT)) < 0) TEST_ERROR
/* open the destination dataset */
if((did2 = H5Dopen2(fid_dst, NAME_DATASET_CHUNKED, H5P_DEFAULT)) < 0) TEST_ERROR
/* Check if the datasets are equal */
if(compare_datasets(did, did2, H5P_DEFAULT, NULL) != TRUE) TEST_ERROR
/* close the destination dataset */
if(H5Dclose(did2) < 0) TEST_ERROR
/* close the source dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
/* Reclaim vlen buffer */
if(H5Dvlen_reclaim(tid, sid, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close datatype */
if(H5Tclose(tid) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
PASSED();
#endif /* H5_HAVE_FILTER_DEFLATE */
return 0;
#ifdef H5_HAVE_FILTER_DEFLATE
error:
H5E_BEGIN_TRY {
H5Dclose(did2);
H5Dclose(did);
H5Pclose(pid);
H5Dvlen_reclaim(tid, sid, H5P_DEFAULT, buf);
H5Tclose(tid);
H5Sclose(sid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
#endif /* H5_HAVE_FILTER_DEFLATE */
} /* end test_copy_dataset_compressed_vl */
/*-------------------------------------------------------------------------
* Function: test_copy_group_empty
*
* Purpose: Create an empty group in SRC file and copy it to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Peter Cao
* Friday, September 30, 2005
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
static int
test_copy_group_empty(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t gid = -1, gid2 = -1; /* Group IDs */
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): empty group");
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* create group at the SRC file */
if((gid = H5Gcreate2(fid_src, NAME_GROUP_EMPTY, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* attach attributes to the group */
if(test_copy_attach_attributes(gid, H5T_NATIVE_INT) < 0) TEST_ERROR
/* close the group */
if(H5Gclose(gid) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* copy the group from SRC to DST */
if(H5Ocopy(fid_src, NAME_GROUP_EMPTY, fid_dst, NAME_GROUP_EMPTY, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the group for copy */
if((gid = H5Gopen2(fid_src, NAME_GROUP_EMPTY, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR
/* open the destination group */
if((gid2 = H5Gopen2(fid_dst, NAME_GROUP_EMPTY, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR
/* Check if the groups are equal */
if(compare_groups(gid, gid2, H5P_DEFAULT, -1, 0) != TRUE) TEST_ERROR
/* close the destination group */
if(H5Gclose(gid2) < 0) TEST_ERROR
/* close the source group */
if(H5Gclose(gid) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Gclose(gid2);
H5Gclose(gid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_group_empty */
/*-------------------------------------------------------------------------
* Function: test_copy_group
*
* Purpose: Create a group in SRC file and copy it to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Peter Cao
* Friday, September 30, 2005
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
static int
test_copy_group(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t sid = -1; /* Dataspace ID */
hid_t did = -1; /* Dataset ID */
hid_t gid = -1, gid2 = -1; /* Group IDs */
hid_t gid_sub = -1; /* Sub-group ID */
hsize_t dim2d[2];
int buf[DIM_SIZE_1][DIM_SIZE_2];
int i, j;
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): simple nested groups");
/* set initial data values */
for (i=0; i<DIM_SIZE_1; i++)
for (j=0; j<DIM_SIZE_2; j++)
buf[i][j] = 10000 + 100*i+j;
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* create group at the SRC file */
if((gid = H5Gcreate2(fid_src, NAME_GROUP_TOP, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* attach attributes to the group */
if(test_copy_attach_attributes(gid, H5T_NATIVE_INT) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim2d[0]=DIM_SIZE_1;
dim2d[1]=DIM_SIZE_2;
/* create dataspace */
if((sid = H5Screate_simple(2, dim2d, NULL)) < 0) TEST_ERROR
/* add a dataset to the group */
if((did = H5Dcreate2(fid_src, NAME_GROUP_DATASET, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
if(H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* create a sub-group */
if((gid_sub = H5Gcreate2(fid_src, NAME_GROUP_SUB, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
if( H5Gclose(gid_sub) < 0) TEST_ERROR
/* create another sub-group */
if((gid_sub = H5Gcreate2(fid_src, NAME_GROUP_SUB_2, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
if( H5Gclose(gid_sub) < 0) TEST_ERROR
/* close the group */
if(H5Gclose(gid) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* copy the group from SRC to DST */
if(H5Ocopy(fid_src, NAME_GROUP_TOP, fid_dst, NAME_GROUP_TOP, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the group for copy */
if((gid = H5Gopen2(fid_src, NAME_GROUP_TOP, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR
/* open the destination group */
if((gid2 = H5Gopen2(fid_dst, NAME_GROUP_TOP, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR
/* Check if the groups are equal */
if(compare_groups(gid, gid2, H5P_DEFAULT, -1, 0) != TRUE) TEST_ERROR
/* close the destination group */
if(H5Gclose(gid2) < 0) TEST_ERROR
/* close the source group */
if(H5Gclose(gid) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Sclose(sid);
H5Dclose(did);
H5Gclose(gid_sub);
H5Gclose(gid2);
H5Gclose(gid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_group */
/*-------------------------------------------------------------------------
* Function: test_copy_root_group
*
* Purpose: Create a root group in SRC file and copy it to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Peter Cao
* August 8, 2006
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
static int
test_copy_root_group(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t sid = -1; /* Dataspace ID */
hid_t did = -1; /* Dataset ID */
hid_t gid = -1, gid2 = -1; /* Group IDs */
hid_t gid_sub = -1; /* Sub-group ID */
hsize_t dim2d[2];
int buf[DIM_SIZE_1][DIM_SIZE_2];
int i, j;
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): root group");
/* set initial data values */
for (i=0; i<DIM_SIZE_1; i++)
for (j=0; j<DIM_SIZE_2; j++)
buf[i][j] = 10000 + 100*i+j;
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* create group at the SRC file */
if((gid = H5Gcreate2(fid_src, NAME_GROUP_TOP, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* attach attributes to the group */
if(test_copy_attach_attributes(gid, H5T_NATIVE_INT) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim2d[0] = DIM_SIZE_1;
dim2d[1] = DIM_SIZE_2;
/* create dataspace */
if((sid = H5Screate_simple(2, dim2d, NULL)) < 0) TEST_ERROR
/* add a dataset to the group */
if((did = H5Dcreate2(fid_src, NAME_GROUP_DATASET, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
if(H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* create a sub-group */
if((gid_sub = H5Gcreate2(fid_src, NAME_GROUP_SUB, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
if(H5Gclose(gid_sub) < 0) TEST_ERROR
/* create another sub-group */
if((gid_sub = H5Gcreate2(fid_src, NAME_GROUP_SUB_2, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
if(H5Gclose(gid_sub) < 0) TEST_ERROR
/* close the group */
if(H5Gclose(gid) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* copy the group from SRC to DST */
if(H5Ocopy(fid_src, "/", fid_dst, "/root_from_src", H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the group for copy */
if((gid = H5Gopen2(fid_src, "/", H5P_DEFAULT)) < 0) FAIL_STACK_ERROR
/* open the destination group */
if((gid2 = H5Gopen2(fid_dst, "/root_from_src", H5P_DEFAULT)) < 0) FAIL_STACK_ERROR
/* Check if the groups are equal */
if(compare_groups(gid, gid2, H5P_DEFAULT, -1, 0) != TRUE) TEST_ERROR
/* close the destination group */
if(H5Gclose(gid2) < 0) TEST_ERROR
/* close the source group */
if(H5Gclose(gid) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Sclose(sid);
H5Dclose(did);
H5Gclose(gid_sub);
H5Gclose(gid2);
H5Gclose(gid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_root_group */
/*-------------------------------------------------------------------------
* Function: test_copy_group_deep
*
* Purpose: Create a deep group hier. in SRC file and copy it to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Quincey Koziol
* Tuesday, November 1, 2005
*
*-------------------------------------------------------------------------
*/
static int
test_copy_group_deep(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t sid = -1; /* Dataspace ID */
hid_t did = -1; /* Dataset ID */
hid_t gid = -1, gid2 = -1; /* Group IDs */
hid_t gid_sub = -1, gid_sub2; /* Sub-group IDs */
hsize_t dim2d[2];
int buf[DIM_SIZE_1][DIM_SIZE_2];
int i, j, k; /* Local index variables */
char objname[NAME_BUF_SIZE]; /* Sub-group & dataset name buffer */
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): deep nested groups");
/* set initial data values */
for (i=0; i<DIM_SIZE_1; i++)
for (j=0; j<DIM_SIZE_2; j++)
buf[i][j] = 10000 + 100*i+j;
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* create group at the SRC file */
if((gid = H5Gcreate2(fid_src, NAME_GROUP_TOP, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* attach attributes to the group */
if(test_copy_attach_attributes(gid, H5T_NATIVE_INT) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim2d[0]=DIM_SIZE_1;
dim2d[1]=DIM_SIZE_2;
/* create dataspace */
if((sid = H5Screate_simple(2, dim2d, NULL)) < 0) TEST_ERROR
/* create nested sub-groups & datasets */
for(i = 0; i < NUM_SUB_GROUPS; i++) {
sprintf(objname, "Group #%d", i);
if((gid_sub = H5Gcreate2(gid, objname, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
for(j = 0; j < NUM_SUB_GROUPS; j++) {
sprintf(objname, "Group #%d", j);
if((gid_sub2 = H5Gcreate2(gid_sub, objname, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
for(k = 0; k < NUM_DATASETS; k++) {
sprintf(objname, "Dataset #%d", k);
/* add a dataset to the group */
if((did = H5Dcreate2(gid_sub2, objname, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
if(H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
if(H5Dclose(did) < 0) TEST_ERROR
} /* end for */
if(H5Gclose(gid_sub2) < 0) TEST_ERROR
} /* end for */
if(H5Gclose(gid_sub) < 0) TEST_ERROR
} /* end for */
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
/* close the group */
if(H5Gclose(gid) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* copy the group from SRC to DST */
if(H5Ocopy(fid_src, NAME_GROUP_TOP, fid_dst, NAME_GROUP_TOP, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the group for copy */
if((gid = H5Gopen2(fid_src, NAME_GROUP_TOP, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR
/* open the destination group */
if((gid2 = H5Gopen2(fid_dst, NAME_GROUP_TOP, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR
/* Check if the groups are equal */
if(compare_groups(gid, gid2, H5P_DEFAULT, -1, 0) != TRUE) TEST_ERROR
/* close the destination group */
if(H5Gclose(gid2) < 0) TEST_ERROR
/* close the source group */
if(H5Gclose(gid) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Sclose(sid);
H5Dclose(did);
H5Gclose(gid_sub);
H5Gclose(gid2);
H5Gclose(gid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_group_deep */
/*-------------------------------------------------------------------------
* Function: test_copy_group_loop
*
* Purpose: Create a group hier. with loops in SRC file and copy it to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Quincey Koziol
* Tuesday, November 1, 2005
*
*-------------------------------------------------------------------------
*/
static int
test_copy_group_loop(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t gid = -1, gid2 = -1; /* Group IDs */
hid_t gid_sub = -1, gid_sub2=-1; /* Sub-group IDs */
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): nested groups with loop");
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* create group at the SRC file */
if((gid = H5Gcreate2(fid_src, NAME_GROUP_TOP, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* attach attributes to the group */
if(test_copy_attach_attributes(gid, H5T_NATIVE_INT) < 0) TEST_ERROR
/* create sub-groups */
if((gid_sub = H5Gcreate2(gid, NAME_GROUP_SUB, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
if((gid_sub2 = H5Gcreate2(gid, NAME_GROUP_SUB_SUB, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* Create link to top group */
if(H5Lcreate_hard(gid, ".", gid_sub2, NAME_GROUP_LOOP, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* close sub sub group */
if( H5Gclose(gid_sub2) < 0) TEST_ERROR
/* close sub group */
if( H5Gclose(gid_sub) < 0) TEST_ERROR
/* close the group */
if(H5Gclose(gid) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* copy the group from SRC to DST */
if(H5Ocopy(fid_src, NAME_GROUP_TOP, fid_dst, NAME_GROUP_TOP, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the group for copy */
if((gid = H5Gopen2(fid_src, NAME_GROUP_TOP, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR
/* open the destination group */
if((gid2 = H5Gopen2(fid_dst, NAME_GROUP_TOP, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR
/* Check if the groups are equal */
if(compare_groups(gid, gid2, H5P_DEFAULT, -1, 0) != TRUE) TEST_ERROR
/* close the destination group */
if(H5Gclose(gid2) < 0) TEST_ERROR
/* close the source group */
if(H5Gclose(gid) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Gclose(gid_sub2);
H5Gclose(gid_sub);
H5Gclose(gid2);
H5Gclose(gid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_group_loop */
/*-------------------------------------------------------------------------
* Function: test_copy_group_wide_loop
*
* Purpose: Create a group hier. with loops in SRC file and copy it to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Quincey Koziol
* Tuesday, November 1, 2005
*
* Note: Create groups w/lots of entries in each level, so that "dense"
* group form is used.
*
* Note: Also tests multiple links to a locked group during copy.
*
*-------------------------------------------------------------------------
*/
static int
test_copy_group_wide_loop(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t gid = -1, gid2 = -1; /* Group IDs */
hid_t gid_sub = -1, gid_sub2=-1; /* Sub-group IDs */
unsigned u, v; /* Local index variables */
char objname[NAME_BUF_SIZE]; /* Object name buffer */
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): wide nested groups with loop");
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* create group at the SRC file */
if((gid = H5Gcreate2(fid_src, NAME_GROUP_TOP, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* attach attributes to the group */
if(test_copy_attach_attributes(gid, H5T_NATIVE_INT) < 0) TEST_ERROR
/* create wide sub-group hierarchy, with multiple links to higher groups */
for(u = 0; u < NUM_WIDE_LOOP_GROUPS; u++) {
sprintf(objname, "%s-%u", NAME_GROUP_SUB, u);
if((gid_sub = H5Gcreate2(gid, objname, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
for(v = 0; v < NUM_WIDE_LOOP_GROUPS; v++) {
sprintf(objname, "%s-%u", NAME_GROUP_SUB_SUB2, v);
if((gid_sub2 = H5Gcreate2(gid_sub, objname, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR
/* Create link to top group */
if(H5Lcreate_hard(gid, ".", gid_sub2, NAME_GROUP_LOOP, H5P_DEFAULT, H5P_DEFAULT) < 0) FAIL_STACK_ERROR
/* Create link to sub-group */
if(H5Lcreate_hard(gid_sub, ".", gid_sub2, NAME_GROUP_LOOP2, H5P_DEFAULT, H5P_DEFAULT) < 0) FAIL_STACK_ERROR
/* Create link to self :-) */
if(H5Lcreate_hard(gid_sub2, ".", gid_sub2, NAME_GROUP_LOOP3, H5P_DEFAULT, H5P_DEFAULT) < 0) FAIL_STACK_ERROR
/* close sub sub group */
if(H5Gclose(gid_sub2) < 0) FAIL_STACK_ERROR
} /* end for */
/* close sub group */
if( H5Gclose(gid_sub) < 0) TEST_ERROR
} /* end for */
/* close the group */
if(H5Gclose(gid) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* copy the group from SRC to DST */
if(H5Ocopy(fid_src, NAME_GROUP_TOP, fid_dst, NAME_GROUP_TOP, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the group for copy */
if((gid = H5Gopen2(fid_src, NAME_GROUP_TOP, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR
/* open the destination group */
if((gid2 = H5Gopen2(fid_dst, NAME_GROUP_TOP, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR
/* Check if the groups are equal */
if(compare_groups(gid, gid2, H5P_DEFAULT, -1, 0) != TRUE) TEST_ERROR
/* close the destination group */
if(H5Gclose(gid2) < 0) TEST_ERROR
/* close the source group */
if(H5Gclose(gid) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Gclose(gid_sub2);
H5Gclose(gid_sub);
H5Gclose(gid2);
H5Gclose(gid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_group_wide_loop */
/*-------------------------------------------------------------------------
* Function: test_copy_group_links
*
* Purpose: Create a group and links in SRC file and copy it to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Peter Cao
* Friday, September 30, 2005
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
static int
test_copy_group_links(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t sid = -1; /* Dataspace ID */
hid_t did = -1; /* Dataset ID */
hid_t gid = -1, gid2 = -1; /* Group IDs */
hsize_t dim2d[2];
int buf[DIM_SIZE_1][DIM_SIZE_2];
int i, j;
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): group with links");
/* set initial data values */
for (i=0; i<DIM_SIZE_1; i++)
for (j=0; j<DIM_SIZE_2; j++)
buf[i][j] = 10000 + 100*i+j;
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* create group at the SRC file */
if((gid = H5Gcreate2(fid_src, NAME_GROUP_LINK, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* attach attributes to the group */
if(test_copy_attach_attributes(gid, H5T_NATIVE_INT) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim2d[0]=DIM_SIZE_1;
dim2d[1]=DIM_SIZE_2;
/* create dataspace */
if((sid = H5Screate_simple(2, dim2d, NULL)) < 0) TEST_ERROR
/* add a dataset to the group */
if((did = H5Dcreate2(fid_src, NAME_LINK_DATASET, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
if(H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* make a hard link to the dataset */
if(H5Lcreate_hard(fid_src, NAME_LINK_DATASET, H5L_SAME_LOC, NAME_LINK_HARD, H5P_DEFAULT, H5P_DEFAULT) < 0) FAIL_STACK_ERROR
/* make a soft link to the dataset */
if(H5Lcreate_soft(NAME_LINK_DATASET, fid_src, NAME_LINK_SOFT, H5P_DEFAULT, H5P_DEFAULT) < 0) FAIL_STACK_ERROR
/* make a soft link to nowhere */
if(H5Lcreate_soft("nowhere", fid_src, NAME_LINK_SOFT_DANGLE, H5P_DEFAULT, H5P_DEFAULT) < 0) FAIL_STACK_ERROR
/* make a dangling external link */
if(H5Lcreate_external("filename", "obj_name", fid_src, NAME_LINK_EXTERN, H5P_DEFAULT, H5P_DEFAULT) < 0) FAIL_STACK_ERROR
/* close the group */
if(H5Gclose(gid) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* copy the group from SRC to DST */
if(H5Ocopy(fid_src, NAME_GROUP_LINK, fid_dst, NAME_GROUP_LINK, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the group for copy */
if((gid = H5Gopen2(fid_src, NAME_GROUP_LINK, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR
/* open the destination group */
if((gid2 = H5Gopen2(fid_dst, NAME_GROUP_LINK, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR
/* Check if the groups are equal */
if(compare_groups(gid, gid2, H5P_DEFAULT, -1, 0) != TRUE) TEST_ERROR
/* close the destination group */
if(H5Gclose(gid2) < 0) TEST_ERROR
/* close the source group */
if(H5Gclose(gid) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Sclose(sid);
H5Dclose(did);
H5Gclose(gid2);
H5Gclose(gid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_group_links */
/*-------------------------------------------------------------------------
* Function: test_copy_soft_link
*
* Purpose: Create a soft link in SRC file and copy it to DST file
* copy a datast pointed by a soft link to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Quincey Koziol
* Tuesday, September 30, 2005
*
*-------------------------------------------------------------------------
*/
static int
test_copy_soft_link(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t sid = -1; /* Dataspace ID */
hid_t did = -1, did2 = -1; /* Dataset IDs */
hid_t gid = -1; /* Group ID */
hsize_t dim2d[2];
int buf[DIM_SIZE_1][DIM_SIZE_2];
int i, j;
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): object through soft link");
/* set initial data values */
for (i=0; i<DIM_SIZE_1; i++)
for (j=0; j<DIM_SIZE_2; j++)
buf[i][j] = 10000 + 100*i+j;
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* create group at the SRC file */
if((gid = H5Gcreate2(fid_src, NAME_GROUP_LINK, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* attach attributes to the group */
if(test_copy_attach_attributes(gid, H5T_NATIVE_INT) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim2d[0]=DIM_SIZE_1;
dim2d[1]=DIM_SIZE_2;
/* create dataspace */
if((sid = H5Screate_simple(2, dim2d, NULL)) < 0) TEST_ERROR
/* add a dataset to the group */
if((did = H5Dcreate2(fid_src, NAME_LINK_DATASET, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
if(H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) FAIL_STACK_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) FAIL_STACK_ERROR
/* make a soft link to the dataset */
if(H5Lcreate_soft(NAME_LINK_DATASET, fid_src, NAME_LINK_SOFT, H5P_DEFAULT, H5P_DEFAULT) < 0) FAIL_STACK_ERROR
/* close the group */
if(H5Gclose(gid) < 0) FAIL_STACK_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) FAIL_STACK_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* copy the dataset from SRC to DST */
if(H5Ocopy(fid_src, NAME_LINK_SOFT, fid_dst, NAME_DATASET_SIMPLE, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the dataset through the soft link for copy */
if((did = H5Dopen2(fid_src, NAME_LINK_SOFT, H5P_DEFAULT)) < 0) TEST_ERROR
/* open the destination dataset */
if((did2 = H5Dopen2(fid_dst, NAME_DATASET_SIMPLE, H5P_DEFAULT)) < 0) TEST_ERROR
/* Check if the datasets are equal */
if(compare_datasets(did, did2, H5P_DEFAULT, buf) != TRUE) TEST_ERROR
/* close the destination dataset */
if(H5Dclose(did2) < 0) TEST_ERROR
/* close the source dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Sclose(sid);
H5Dclose(did2);
H5Dclose(did);
H5Gclose(gid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_soft_link */
/*-------------------------------------------------------------------------
* Function: test_copy_ext_link
*
* Purpose: Create an external link in SRC file and copy it to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: James Laird
* Friday, June 16, 2006
*
*-------------------------------------------------------------------------
*/
static int
test_copy_ext_link(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1, fid_ext = -1; /* File IDs */
hid_t sid = -1; /* Dataspace ID */
hid_t did = -1, did2 = -1; /* Dataset IDs */
hid_t gid = -1; /* Group ID */
hsize_t dim2d[2];
int buf[DIM_SIZE_1][DIM_SIZE_2];
int i, j;
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
char ext_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): object through external link");
/* set initial data values */
for (i=0; i<DIM_SIZE_1; i++)
for (j=0; j<DIM_SIZE_2; j++)
buf[i][j] = 10000 + 100*i+j;
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
h5_fixname(FILENAME[2], fapl, ext_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* create group at the SRC file */
if((gid = H5Gcreate2(fid_src, NAME_GROUP_LINK, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* attach attributes to the group */
if(test_copy_attach_attributes(gid, H5T_NATIVE_INT) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim2d[0]=DIM_SIZE_1;
dim2d[1]=DIM_SIZE_2;
/* create dataspace */
if((sid = H5Screate_simple(2, dim2d, NULL)) < 0) TEST_ERROR
/* add a dataset to the group */
if((did = H5Dcreate2(fid_src, NAME_LINK_DATASET, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
if(H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the group */
if(H5Gclose(gid) < 0) TEST_ERROR
/* create file to hold external links to the src file */
if((fid_ext = H5Fcreate(ext_filename, H5F_ACC_TRUNC, H5P_DEFAULT, fapl)) < 0) TEST_ERROR
/* create group in the file that will hold the external link */
if((gid = H5Gcreate2(fid_ext, NAME_GROUP_LINK, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* Create an external link to the dataset in the source file */
if(H5Lcreate_external(src_filename, NAME_LINK_DATASET, fid_ext, NAME_LINK_EXTERN, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* close the group and file */
if(H5Gclose(gid) < 0) TEST_ERROR
if(H5Fclose(fid_ext) < 0) TEST_ERROR
/* open the "extern" file with read-only */
if((fid_ext = H5Fopen(ext_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* copy the dataset from SRC to DST */
if(H5Ocopy(fid_ext, NAME_LINK_EXTERN, fid_dst, NAME_DATASET_SIMPLE, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the dataset through the external link */
if((did = H5Dopen2(fid_ext, NAME_LINK_EXTERN, H5P_DEFAULT)) < 0) TEST_ERROR
/* open the destination dataset */
if((did2 = H5Dopen2(fid_dst, NAME_DATASET_SIMPLE, H5P_DEFAULT)) < 0) TEST_ERROR
/* Check if the datasets are equal */
if(compare_datasets(did, did2, H5P_DEFAULT, buf) != TRUE) TEST_ERROR
/* close the destination dataset */
if(H5Dclose(did2) < 0) TEST_ERROR
/* close the source dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the EXT file */
if(H5Fclose(fid_ext) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Sclose(sid);
H5Dclose(did2);
H5Dclose(did);
H5Gclose(gid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_ext_link */
/*-------------------------------------------------------------------------
* Function: test_copy_exist
*
* Purpose: Create a simple dataset in SRC file and copy it onto an
* existing object in DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Quincey Koziol
* Tuesday, November 8, 2005
*
*-------------------------------------------------------------------------
*/
static int
test_copy_exist(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t sid = -1; /* Dataspace ID */
hid_t did = -1; /* Dataset IDs */
int buf[DIM_SIZE_1][DIM_SIZE_2]; /* Buffer for writing data */
hsize_t dim2d[2]; /* Dataset dimensions */
int i, j; /* local index variables */
herr_t ret; /* Generic return value */
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): existing object");
/* Initialize write buffer */
for (i=0; i<DIM_SIZE_1; i++)
for (j=0; j<DIM_SIZE_2; j++)
buf[i][j] = 10000 + 100*i+j;
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim2d[0] = DIM_SIZE_1;
dim2d[1] = DIM_SIZE_2;
/* create 2D dataspace */
if((sid = H5Screate_simple(2, dim2d, NULL)) < 0) TEST_ERROR
/* create 2D int dataset at SRC file */
if((did = H5Dcreate2(fid_src, NAME_DATASET_SIMPLE, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* write data into file */
if(H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
/* attach attributes to the dataset */
if(test_copy_attach_attributes(did, H5T_NATIVE_INT) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* copy the dataset from SRC to DST */
if(H5Ocopy(fid_src, NAME_DATASET_SIMPLE,fid_dst, NAME_DATASET_SIMPLE, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* try to copy the dataset from SRC to DST again (should fail) */
H5E_BEGIN_TRY {
ret = H5Ocopy(fid_src, NAME_DATASET_SIMPLE, fid_dst, NAME_DATASET_SIMPLE, H5P_DEFAULT, H5P_DEFAULT);
} H5E_END_TRY;
if( ret >= 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Dclose(did);
H5Sclose(sid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_exist */
/*-------------------------------------------------------------------------
* Function: test_copy_path
*
* Purpose: Create a simple dataset in SRC file and copy it to DST file
* using a full path name
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Quincey Koziol
* Tuesday, November 8, 2005
*
*-------------------------------------------------------------------------
*/
static int
test_copy_path(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t sid = -1; /* Dataspace ID */
hid_t did = -1, did2 = -1; /* Dataset IDs */
hid_t gid = -1; /* Group ID */
int buf[DIM_SIZE_1][DIM_SIZE_2]; /* Buffer for writing data */
hsize_t dim2d[2]; /* Dataset dimensions */
int i, j; /* local index variables */
herr_t ret; /* Generic return value */
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): full path");
/* Initialize write buffer */
for (i=0; i<DIM_SIZE_1; i++)
for (j=0; j<DIM_SIZE_2; j++)
buf[i][j] = 10000 + 100*i+j;
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim2d[0] = DIM_SIZE_1;
dim2d[1] = DIM_SIZE_2;
/* create 2D dataspace */
if((sid = H5Screate_simple(2, dim2d, NULL)) < 0) TEST_ERROR
/* create 2D int dataset at SRC file */
if((did = H5Dcreate2(fid_src, NAME_DATASET_SIMPLE, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* write data into file */
if(H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
/* attach attributes to the dataset */
if(test_copy_attach_attributes(did, H5T_NATIVE_INT) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* copy the dataset from SRC to DST (should fail - intermediate groups not there) */
H5E_BEGIN_TRY {
ret = H5Ocopy(fid_src, NAME_DATASET_SUB_SUB, fid_dst, NAME_DATASET_SUB_SUB, H5P_DEFAULT, H5P_DEFAULT);
} H5E_END_TRY;
if( ret >= 0) TEST_ERROR
/* Create the intermediate groups in destination file */
if((gid = H5Gcreate2(fid_dst, NAME_GROUP_TOP, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
if(H5Gclose(gid) < 0) TEST_ERROR
if((gid = H5Gcreate2(fid_dst, NAME_GROUP_SUB, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
if(H5Gclose(gid) < 0) TEST_ERROR
if((gid = H5Gcreate2(fid_dst, NAME_GROUP_SUB_SUB, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
if(H5Gclose(gid) < 0) TEST_ERROR
/* copy the dataset from SRC to DST, using full path */
if(H5Ocopy(fid_src, NAME_DATASET_SIMPLE, fid_dst, NAME_DATASET_SUB_SUB, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the dataset for copy */
if((did = H5Dopen2(fid_src, NAME_DATASET_SIMPLE, H5P_DEFAULT)) < 0) TEST_ERROR
/* open the destination dataset */
if((did2 = H5Dopen2(fid_dst, NAME_DATASET_SUB_SUB, H5P_DEFAULT)) < 0) TEST_ERROR
/* Check if the datasets are equal */
if(compare_datasets(did, did2, H5P_DEFAULT, buf) != TRUE) TEST_ERROR
/* close the destination dataset */
if(H5Dclose(did2) < 0) TEST_ERROR
/* close the source dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Dclose(did2);
H5Dclose(did);
H5Sclose(sid);
H5Gclose(gid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_path */
/*-------------------------------------------------------------------------
* Function: test_copy_same_file_named_datatype
*
* Purpose: Create name datatype in SRC file and copy it to same file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Quincey Koziol
* Tuesday, November 8, 2005
*
*-------------------------------------------------------------------------
*/
static int
test_copy_same_file_named_datatype(hid_t fcpl_src, hid_t fapl)
{
hid_t fid = -1; /* File ID */
hid_t tid = -1, tid2 = -1; /* Datatype IDs */
char filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): named datatype in same file");
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, filename, sizeof filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid = H5Fcreate(filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* create datatype */
if((tid = H5Tcopy(H5T_NATIVE_INT)) < 0) TEST_ERROR
/* create named datatype */
if((H5Tcommit2(fid, NAME_DATATYPE_SIMPLE, tid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* copy the datatype from SRC to DST */
if(H5Ocopy(fid, NAME_DATATYPE_SIMPLE, fid, NAME_DATATYPE_SIMPLE2, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the copied datatype */
if((tid2 = H5Topen2(fid, NAME_DATATYPE_SIMPLE2, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR
/* Compare the datatypes */
if(H5Tequal(tid, tid2) != TRUE) TEST_ERROR
/* close the destination datatype */
if(H5Tclose(tid2) < 0) TEST_ERROR
/* close the source datatype */
if(H5Tclose(tid) < 0) TEST_ERROR
/* close the file */
if(H5Fclose(fid) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Tclose(tid2);
H5Tclose(tid);
H5Fclose(fid);
} H5E_END_TRY;
return 1;
} /* end test_copy_same_file_named_datatype */
/*-------------------------------------------------------------------------
* Function: test_copy_old_layout
*
* Purpose: Copy dataset that uses the "old" layout version (pre version 3)
* format.
*
* Note: This test uses the "fill_old.h5" file for convenience, since it
* has a dataset with the old layout format.
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Quincey Koziol
* Thursday, November 30, 2006
*
*-------------------------------------------------------------------------
*/
static int
test_copy_old_layout(hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t did = -1, did2 = -1; /* Dataset IDs */
char *srcdir = HDgetenv("srcdir"); /* Where the src code is located */
char src_filename[NAME_BUF_SIZE] = "";
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): dataset with old layout format");
/* Generate correct name for source file by prepending the source path */
if(srcdir && ((HDstrlen(srcdir) + HDstrlen(FILE_OLD_LAYOUT) + 1) < sizeof(src_filename))) {
HDstrcpy(src_filename, srcdir);
HDstrcat(src_filename, "/");
} /* end if */
HDstrcat(src_filename, FILE_OLD_LAYOUT);
/* Initialize the destination filename */
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* open source file (read-only) */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, H5P_DEFAULT)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* copy the dataset from SRC to DST */
if(H5Ocopy(fid_src, NAME_OLD_FORMAT, fid_dst, NAME_DATASET_SIMPLE, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the source dataset */
if((did = H5Dopen2(fid_src, NAME_OLD_FORMAT, H5P_DEFAULT)) < 0) TEST_ERROR
/* open the destination dataset */
if((did2 = H5Dopen2(fid_dst, NAME_DATASET_SIMPLE, H5P_DEFAULT)) < 0) TEST_ERROR
/* Check if the datasets are equal */
if(compare_datasets(did, did2, H5P_DEFAULT, NULL) != TRUE) TEST_ERROR
/* close the destination dataset */
if(H5Dclose(did2) < 0) TEST_ERROR
/* close the source dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Dclose(did2);
H5Dclose(did);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_old_layout */
/*-------------------------------------------------------------------------
* Function: test_copy_dataset_compact_named_vl
*
* Purpose: Create a dataset that uses a named variable length datatype
* in SRC file and copy it to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Peter Cao
* Saturday, February 4, 2006
*
*-------------------------------------------------------------------------
*/
static int
test_copy_dataset_compact_named_vl(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t tid = -1, tid_copy=-1; /* Datatype ID */
hid_t sid = -1; /* Dataspace ID */
hid_t pid = -1; /* Dataset creation property list ID */
hid_t did = -1, did2 = -1; /* Dataset IDs */
unsigned int i, j; /* Local index variables */
hsize_t dim1d[1]; /* Dataset dimensions */
hvl_t buf[DIM_SIZE_1]; /* Buffer for writing data */
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): compact dataset with named VLEN datatype");
/* set initial data values */
for(i = 0; i < DIM_SIZE_1; i++) {
buf[i].len = i+1;
buf[i].p = (int *)HDmalloc(buf[i].len * sizeof(int));
for(j = 0; j < buf[i].len; j++)
((int *)buf[i].p)[j] = (int)(i * 10 + j);
} /* end for */
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim1d[0]=DIM_SIZE_1;
/* create dataspace */
if((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR
/* create datatype */
if((tid = H5Tvlen_create(H5T_NATIVE_INT)) < 0) TEST_ERROR
/* make a copy of the datatype for later use */
if((tid_copy = H5Tcopy(tid)) < 0)TEST_ERROR
/* named data type */
if((H5Tcommit2(fid_src, NAME_DATATYPE_VL, tid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* create and set compact plist */
if((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR
if(H5Pset_layout(pid, H5D_COMPACT) < 0) TEST_ERROR
/* create dataset at SRC file */
if((did = H5Dcreate2(fid_src, NAME_DATASET_VL, tid, sid, H5P_DEFAULT, pid, H5P_DEFAULT)) < 0) TEST_ERROR
/* write data into file */
if(H5Dwrite(did, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close compact plist */
if(H5Pclose(pid) < 0) TEST_ERROR
/* close the datatype */
if(H5Tclose(tid) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* copy the dataset from SRC to DST */
if(H5Ocopy(fid_src, NAME_DATASET_VL, fid_dst, NAME_DATASET_VL, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the dataset for copy */
if((did = H5Dopen2(fid_src, NAME_DATASET_VL, H5P_DEFAULT)) < 0) TEST_ERROR
/* open the destination dataset */
if((did2 = H5Dopen2(fid_dst, NAME_DATASET_VL, H5P_DEFAULT)) < 0) TEST_ERROR
/* Check if the datasets are equal */
if(compare_datasets(did, did2, H5P_DEFAULT, buf) != TRUE) TEST_ERROR
/* close the destination dataset */
if(H5Dclose(did2) < 0) TEST_ERROR
/* close the source dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
/* Reclaim vlen buffer */
if(H5Dvlen_reclaim(tid_copy, sid, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close datatype */
if(H5Tclose(tid_copy) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Pclose(pid);
H5Dclose(did2);
H5Dclose(did);
H5Dvlen_reclaim(tid_copy, sid, H5P_DEFAULT, buf);
H5Tclose(tid);
H5Tclose(tid_copy);
H5Sclose(sid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_dataset_compact_named_vl */
/*-------------------------------------------------------------------------
* Function: test_copy_dataset_contig_named_vl
*
* Purpose: Create a dataset that uses a named variable length datatype
* in SRC file and copy it to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Peter Cao
* Saturday, February 11, 2006
*
*-------------------------------------------------------------------------
*/
static int
test_copy_dataset_contig_named_vl(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t tid = -1, tid_copy=-1; /* Datatype ID */
hid_t sid = -1; /* Dataspace ID */
hid_t did = -1, did2 = -1; /* Dataset IDs */
unsigned int i, j; /* Local index variables */
hsize_t dim1d[1]; /* Dataset dimensions */
hvl_t buf[DIM_SIZE_1]; /* Buffer for writing data */
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): contigous dataset with named VLEN datatype");
/* set initial data values */
for(i = 0; i < DIM_SIZE_1; i++) {
buf[i].len = i+1;
buf[i].p = (int *)HDmalloc(buf[i].len * sizeof(int));
for(j = 0; j < buf[i].len; j++)
((int *)buf[i].p)[j] = (int)(i * 10 + j);
} /* end for */
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim1d[0]=DIM_SIZE_1;
/* create dataspace */
if((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR
/* create datatype */
if((tid = H5Tvlen_create(H5T_NATIVE_INT)) < 0) TEST_ERROR
/* make a copy of the datatype for later use */
if((tid_copy = H5Tcopy(tid)) < 0)TEST_ERROR
/* named data type */
if((H5Tcommit2(fid_src, NAME_DATATYPE_VL, tid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* create dataset at SRC file */
if((did = H5Dcreate2(fid_src, NAME_DATASET_VL, tid, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* write data into file */
if(H5Dwrite(did, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close the datatype */
if(H5Tclose(tid) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* copy the dataset from SRC to DST */
if(H5Ocopy(fid_src, NAME_DATASET_VL, fid_dst, NAME_DATASET_VL, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the dataset for copy */
if((did = H5Dopen2(fid_src, NAME_DATASET_VL, H5P_DEFAULT)) < 0) TEST_ERROR
/* open the destination dataset */
if((did2 = H5Dopen2(fid_dst, NAME_DATASET_VL, H5P_DEFAULT)) < 0) TEST_ERROR
/* Check if the datasets are equal */
if(compare_datasets(did, did2, H5P_DEFAULT, buf) != TRUE) TEST_ERROR
/* close the destination dataset */
if(H5Dclose(did2) < 0) TEST_ERROR
/* close the source dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
/* Reclaim vlen buffer */
if(H5Dvlen_reclaim(tid_copy, sid, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close datatype */
if(H5Tclose(tid_copy) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Dclose(did2);
H5Dclose(did);
H5Dvlen_reclaim(tid_copy, sid, H5P_DEFAULT, buf);
H5Tclose(tid);
H5Tclose(tid_copy);
H5Sclose(sid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_dataset_contig_named_vl */
/*-------------------------------------------------------------------------
* Function: test_copy_dataset_chunked_named_vl
*
* Purpose: Create a dataset that uses a named variable length datatype
* in SRC file and copy it to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Peter Cao
* Saturday, February 11, 2006
*
*-------------------------------------------------------------------------
*/
static int
test_copy_dataset_chunked_named_vl(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t tid = -1, tid_copy=-1; /* Datatype ID */
hid_t sid = -1; /* Dataspace ID */
hid_t pid = -1; /* Dataset creation property list ID */
hid_t did = -1, did2 = -1; /* Dataset IDs */
unsigned int i, j; /* Local index variables */
hsize_t dim1d[1]; /* Dataset dimensions */
hvl_t buf[DIM_SIZE_1]; /* Buffer for writing data */
hsize_t chunk_dim1d[1] = {CHUNK_SIZE_1}; /* Chunk dimensions */
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): chunked dataset with named VLEN datatype");
/* set initial data values */
for(i = 0; i < DIM_SIZE_1; i++) {
buf[i].len = i+1;
buf[i].p = (int *)HDmalloc(buf[i].len * sizeof(int));
for(j = 0; j < buf[i].len; j++)
((int *)buf[i].p)[j] = (int)(i * 10 + j);
} /* end for */
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim1d[0]=DIM_SIZE_1;
/* create dataspace */
if((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR
/* create datatype */
if((tid = H5Tvlen_create(H5T_NATIVE_INT)) < 0) TEST_ERROR
/* make a copy of the datatype for later use */
if((tid_copy = H5Tcopy(tid)) < 0)TEST_ERROR
/* named data type */
if((H5Tcommit2(fid_src, NAME_DATATYPE_VL, tid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* create and set chunk plist */
if((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR
if(H5Pset_chunk(pid, 1, chunk_dim1d) < 0) TEST_ERROR
/* create dataset at SRC file */
if((did = H5Dcreate2(fid_src, NAME_DATASET_VL, tid, sid, H5P_DEFAULT, pid, H5P_DEFAULT)) < 0) TEST_ERROR
/* write data into file */
if(H5Dwrite(did, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close compact plist */
if(H5Pclose(pid) < 0) TEST_ERROR
/* close the datatype */
if(H5Tclose(tid) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* copy the dataset from SRC to DST */
if(H5Ocopy(fid_src, NAME_DATASET_VL, fid_dst, NAME_DATASET_VL, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the dataset for copy */
if((did = H5Dopen2(fid_src, NAME_DATASET_VL, H5P_DEFAULT)) < 0) TEST_ERROR
/* open the destination dataset */
if((did2 = H5Dopen2(fid_dst, NAME_DATASET_VL, H5P_DEFAULT)) < 0) TEST_ERROR
/* Check if the datasets are equal */
if(compare_datasets(did, did2, H5P_DEFAULT, buf) != TRUE) TEST_ERROR
/* close the destination dataset */
if(H5Dclose(did2) < 0) TEST_ERROR
/* close the source dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
/* Reclaim vlen buffer */
if(H5Dvlen_reclaim(tid_copy, sid, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close datatype */
if(H5Tclose(tid_copy) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Pclose(pid);
H5Dclose(did2);
H5Dclose(did);
H5Dvlen_reclaim(tid_copy, sid, H5P_DEFAULT, buf);
H5Tclose(tid);
H5Tclose(tid_copy);
H5Sclose(sid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_dataset_chunked_named_vl */
/*-------------------------------------------------------------------------
* Function: test_copy_dataset_compressed_named_vl
*
* Purpose: Create a dataset that uses a named variable length datatype
* in SRC file and copy it to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Peter Cao
* Saturday, February 11, 2006
*
*-------------------------------------------------------------------------
*/
static int
test_copy_dataset_compressed_named_vl(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t tid = -1, tid_copy=-1; /* Datatype ID */
hid_t sid = -1; /* Dataspace ID */
hid_t pid = -1; /* Dataset creation property list ID */
hid_t did = -1, did2 = -1; /* Dataset IDs */
unsigned int i, j; /* Local index variables */
hsize_t dim1d[1]; /* Dataset dimensions */
hvl_t buf[DIM_SIZE_1]; /* Buffer for writing data */
hsize_t chunk_dim1d[1] = {CHUNK_SIZE_1}; /* Chunk dimensions */
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): compressed dataset with named VLEN datatype");
/* set initial data values */
for(i = 0; i < DIM_SIZE_1; i++) {
buf[i].len = i+1;
buf[i].p = (int *)HDmalloc(buf[i].len * sizeof(int));
for(j = 0; j < buf[i].len; j++)
((int *)buf[i].p)[j] = (int)(i * 10 + j);
} /* end for */
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim1d[0]=DIM_SIZE_1;
/* create dataspace */
if((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR
/* create datatype */
if((tid = H5Tvlen_create(H5T_NATIVE_INT)) < 0) TEST_ERROR
/* make a copy of the datatype for later use */
if((tid_copy = H5Tcopy(tid)) < 0)TEST_ERROR
/* named data type */
if((H5Tcommit2(fid_src, NAME_DATATYPE_VL, tid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* create and set chunk plist */
if((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR
if(H5Pset_chunk(pid, 1, chunk_dim1d) < 0) TEST_ERROR
if(H5Pset_deflate(pid, 9) < 0) TEST_ERROR
/* create dataset at SRC file */
if((did = H5Dcreate2(fid_src, NAME_DATASET_VL, tid, sid, H5P_DEFAULT, pid, H5P_DEFAULT)) < 0) TEST_ERROR
/* write data into file */
if(H5Dwrite(did, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close compact plist */
if(H5Pclose(pid) < 0) TEST_ERROR
/* close the datatype */
if(H5Tclose(tid) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* copy the dataset from SRC to DST */
if(H5Ocopy(fid_src, NAME_DATASET_VL, fid_dst, NAME_DATASET_VL, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the dataset for copy */
if((did = H5Dopen2(fid_src, NAME_DATASET_VL, H5P_DEFAULT)) < 0) TEST_ERROR
/* open the destination dataset */
if((did2 = H5Dopen2(fid_dst, NAME_DATASET_VL, H5P_DEFAULT)) < 0) TEST_ERROR
/* Check if the datasets are equal */
if(compare_datasets(did, did2, H5P_DEFAULT, buf) != TRUE) TEST_ERROR
/* close the destination dataset */
if(H5Dclose(did2) < 0) TEST_ERROR
/* close the source dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
/* Reclaim vlen buffer */
if(H5Dvlen_reclaim(tid_copy, sid, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close datatype */
if(H5Tclose(tid_copy) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Pclose(pid);
H5Dclose(did2);
H5Dclose(did);
H5Dvlen_reclaim(tid_copy, sid, H5P_DEFAULT, buf);
H5Tclose(tid);
H5Tclose(tid_copy);
H5Sclose(sid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_dataset_compressed_named_vl */
/*-------------------------------------------------------------------------
* Function: test_copy_dataset_compact_vl_vl
*
* Purpose: Create a compact dataset w/nested VLEN datatype
* in SRC file and copy it to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Peter Cao
* Saturday, February 11, 2006
*
*-------------------------------------------------------------------------
*/
static int
test_copy_dataset_compact_vl_vl(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t tid=-1, tid2=-1; /* Datatype ID */
hid_t sid = -1; /* Dataspace ID */
hid_t pid = -1; /* Dataset creation property list ID */
hid_t did = -1, did2 = -1; /* Dataset IDs */
unsigned int i, j, k; /* Local index variables */
hsize_t dim1d[1]; /* Dataset dimensions */
hvl_t buf[DIM_SIZE_1]; /* Buffer for writing data */
hvl_t *tvl; /* Temporary pointer to VL information */
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): compact dataset with nested VLEN datatype");
/* set initial data values */
for(i=0; i<DIM_SIZE_1; i++) {
buf[i].p=HDmalloc((i+1)*sizeof(hvl_t));
if(buf[i].p==NULL) {
TestErrPrintf("Cannot allocate memory for VL data! i=%u\n",i);
return 1;
} /* end if */
buf[i].len=i+1;
for(tvl = (hvl_t *)buf[i].p,j=0; j<(i+1); j++, tvl++) {
tvl->p=HDmalloc((j+1)*sizeof(unsigned int));
if(tvl->p==NULL) {
TestErrPrintf("Cannot allocate memory for VL data! i=%u, j=%u\n",i,j);
return 1;
} /* end if */
tvl->len=j+1;
for(k=0; k<(j+1); k++)
((unsigned int *)tvl->p)[k]=i*100+j*10+k;
} /* end for */
} /* end for */
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim1d[0]=DIM_SIZE_1;
/* create dataspace */
if((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR
/* create datatype */
if((tid = H5Tvlen_create(H5T_NATIVE_INT)) < 0) TEST_ERROR
/* create nested VL datatype */
if((tid2 = H5Tvlen_create(tid)) < 0) TEST_ERROR
/* create and set compact plist */
if((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR
if(H5Pset_layout(pid, H5D_COMPACT) < 0) TEST_ERROR
/* create dataset at SRC file */
if((did = H5Dcreate2(fid_src, NAME_DATASET_VL_VL, tid2, sid, H5P_DEFAULT, pid, H5P_DEFAULT)) < 0) TEST_ERROR
/* write data into file */
if(H5Dwrite(did, tid2, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close compact plist */
if(H5Pclose(pid) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* copy the dataset from SRC to DST */
if(H5Ocopy(fid_src, NAME_DATASET_VL_VL, fid_dst, NAME_DATASET_VL_VL, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the dataset for copy */
if((did = H5Dopen2(fid_src, NAME_DATASET_VL_VL, H5P_DEFAULT)) < 0) TEST_ERROR
/* open the destination dataset */
if((did2 = H5Dopen2(fid_dst, NAME_DATASET_VL_VL, H5P_DEFAULT)) < 0) TEST_ERROR
/* Check if the datasets are equal */
if(compare_datasets(did, did2, H5P_DEFAULT, buf) != TRUE) TEST_ERROR
/* close the destination dataset */
if(H5Dclose(did2) < 0) TEST_ERROR
/* close the source dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
/* Reclaim vlen buffer */
if(H5Dvlen_reclaim(tid2, sid, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close datatype */
if(H5Tclose(tid) < 0) TEST_ERROR
if(H5Tclose(tid2) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Dclose(did2);
H5Dclose(did);
H5Dvlen_reclaim(tid2, sid, H5P_DEFAULT, buf);
H5Tclose(tid);
H5Tclose(tid2);
H5Sclose(sid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_dataset_compact_vl_vl */
/*-------------------------------------------------------------------------
* Function: test_copy_dataset_contig_vl_vl
*
* Purpose: Create a compact dataset w/nested VLEN datatype
* in SRC file and copy it to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Peter Cao
* Saturday, February 11, 2006
*
*-------------------------------------------------------------------------
*/
static int
test_copy_dataset_contig_vl_vl(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t tid=-1, tid2=-1; /* Datatype ID */
hid_t sid = -1; /* Dataspace ID */
hid_t pid = -1; /* Dataset creation property list ID */
hid_t did = -1, did2 = -1; /* Dataset IDs */
unsigned int i, j, k; /* Local index variables */
hsize_t dim1d[1]; /* Dataset dimensions */
hvl_t buf[DIM_SIZE_1]; /* Buffer for writing data */
hvl_t *tvl; /* Temporary pointer to VL information */
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): contigous dataset with nested VLEN datatype");
/* set initial data values */
for(i=0; i<DIM_SIZE_1; i++) {
buf[i].p=HDmalloc((i+1)*sizeof(hvl_t));
if(buf[i].p==NULL) {
TestErrPrintf("Cannot allocate memory for VL data! i=%u\n",i);
TEST_ERROR
} /* end if */
buf[i].len=i+1;
for(tvl = (hvl_t *)buf[i].p,j=0; j<(i+1); j++, tvl++) {
tvl->p=HDmalloc((j+1)*sizeof(unsigned int));
if(tvl->p==NULL) {
TestErrPrintf("Cannot allocate memory for VL data! i=%u, j=%u\n",i,j);
TEST_ERROR
} /* end if */
tvl->len=j+1;
for(k=0; k<(j+1); k++)
((unsigned int *)tvl->p)[k]=i*100+j*10+k;
} /* end for */
} /* end for */
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim1d[0]=DIM_SIZE_1;
/* create dataspace */
if((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR
/* create datatype */
if((tid = H5Tvlen_create(H5T_NATIVE_INT)) < 0) TEST_ERROR
/* create nested VL datatype */
if((tid2 = H5Tvlen_create(tid)) < 0) TEST_ERROR
/* create and set compact plist */
if((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR
/* create dataset at SRC file */
if((did = H5Dcreate2(fid_src, NAME_DATASET_VL_VL, tid2, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* write data into file */
if(H5Dwrite(did, tid2, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close compact plist */
if(H5Pclose(pid) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* copy the dataset from SRC to DST */
if(H5Ocopy(fid_src, NAME_DATASET_VL_VL, fid_dst, NAME_DATASET_VL_VL, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the dataset for copy */
if((did = H5Dopen2(fid_src, NAME_DATASET_VL_VL, H5P_DEFAULT)) < 0) TEST_ERROR
/* open the destination dataset */
if((did2 = H5Dopen2(fid_dst, NAME_DATASET_VL_VL, H5P_DEFAULT)) < 0) TEST_ERROR
/* Check if the datasets are equal */
if(compare_datasets(did, did2, H5P_DEFAULT, buf) != TRUE) TEST_ERROR
/* close the destination dataset */
if(H5Dclose(did2) < 0) TEST_ERROR
/* close the source dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
/* Reclaim vlen buffer */
if(H5Dvlen_reclaim(tid2, sid, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close datatype */
if(H5Tclose(tid) < 0) TEST_ERROR
if(H5Tclose(tid2) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Dclose(did2);
H5Dclose(did);
H5Dvlen_reclaim(tid2, sid, H5P_DEFAULT, buf);
H5Tclose(tid);
H5Tclose(tid2);
H5Sclose(sid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_dataset_contig_vl_vl */
/*-------------------------------------------------------------------------
* Function: test_copy_dataset_chunked_vl_vl
*
* Purpose: Create a dataset that uses a named variable length datatype
* in SRC file and copy it to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Peter Cao
* Saturday, March 11, 2006
*
*-------------------------------------------------------------------------
*/
static int
test_copy_dataset_chunked_vl_vl(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t tid = -1, tid2=-1; /* Datatype ID */
hid_t sid = -1; /* Dataspace ID */
hid_t pid = -1; /* Dataset creation property list ID */
hid_t did = -1, did2 = -1; /* Dataset IDs */
unsigned int i, j, k; /* Local index variables */
hsize_t dim1d[1]; /* Dataset dimensions */
hvl_t buf[DIM_SIZE_1]; /* Buffer for writing data */
hvl_t *tvl; /* Temporary pointer to VL information */
hsize_t chunk_dim1d[1] = {CHUNK_SIZE_1}; /* Chunk dimensions */
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): chunked dataset with nested VLEN datatype");
/* set initial data values */
for(i=0; i<DIM_SIZE_1; i++) {
buf[i].p=HDmalloc((i+1)*sizeof(hvl_t));
if(buf[i].p==NULL) {
TestErrPrintf("Cannot allocate memory for VL data! i=%u\n",i);
TEST_ERROR
} /* end if */
buf[i].len=i+1;
for(tvl = (hvl_t *)buf[i].p,j=0; j<(i+1); j++, tvl++) {
tvl->p=HDmalloc((j+1)*sizeof(unsigned int));
if(tvl->p==NULL) {
TestErrPrintf("Cannot allocate memory for VL data! i=%u, j=%u\n",i,j);
TEST_ERROR
} /* end if */
tvl->len=j+1;
for(k=0; k<(j+1); k++)
((unsigned int *)tvl->p)[k]=i*100+j*10+k;
} /* end for */
} /* end for */
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim1d[0]=DIM_SIZE_1;
/* create dataspace */
if((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR
/* create datatype */
if((tid = H5Tvlen_create(H5T_NATIVE_INT)) < 0) TEST_ERROR
/* create nested VL datatype */
if((tid2 = H5Tvlen_create(tid)) < 0) TEST_ERROR
/* create and set chunk plist */
if((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR
if(H5Pset_chunk(pid, 1, chunk_dim1d) < 0) TEST_ERROR
/* create dataset at SRC file */
if((did = H5Dcreate2(fid_src, NAME_DATASET_VL_VL, tid2, sid, H5P_DEFAULT, pid, H5P_DEFAULT)) < 0) TEST_ERROR
/* write data into file */
if(H5Dwrite(did, tid2, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close compact plist */
if(H5Pclose(pid) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
if(H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* copy the dataset from SRC to DST */
if(H5Ocopy(fid_src, NAME_DATASET_VL_VL, fid_dst, NAME_DATASET_VL_VL, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the dataset for copy */
if((did = H5Dopen2(fid_src, NAME_DATASET_VL_VL, H5P_DEFAULT)) < 0) TEST_ERROR
/* open the destination dataset */
if((did2 = H5Dopen2(fid_dst, NAME_DATASET_VL_VL, H5P_DEFAULT)) < 0) TEST_ERROR
/* Check if the datasets are equal */
if(compare_datasets(did, did2, H5P_DEFAULT, buf) != TRUE) TEST_ERROR
/* close the destination dataset */
if(H5Dclose(did2) < 0) TEST_ERROR
/* close the source dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
/* Reclaim vlen buffer */
if(H5Dvlen_reclaim(tid2, sid, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close datatype */
if(H5Tclose(tid) < 0) TEST_ERROR
if(H5Tclose(tid2) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Pclose(pid);
H5Dclose(did2);
H5Dclose(did);
H5Dvlen_reclaim(tid2, sid, H5P_DEFAULT, buf);
H5Tclose(tid);
H5Tclose(tid2);
H5Sclose(sid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_dataset_chunked_vl_vl */
/*-------------------------------------------------------------------------
* Function: test_copy_dataset_compressed_vl_vl
*
* Purpose: Create a dataset that uses a named variable length datatype
* in SRC file and copy it to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Peter Cao
* Saturday, March 11, 2006
*
*-------------------------------------------------------------------------
*/
static int
test_copy_dataset_compressed_vl_vl(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t tid = -1, tid2=-1; /* Datatype ID */
hid_t sid = -1; /* Dataspace ID */
hid_t pid = -1; /* Dataset creation property list ID */
hid_t did = -1, did2 = -1; /* Dataset IDs */
unsigned int i, j, k; /* Local index variables */
hsize_t dim1d[1]; /* Dataset dimensions */
hvl_t buf[DIM_SIZE_1]; /* Buffer for writing data */
hvl_t *tvl; /* Temporary pointer to VL information */
hsize_t chunk_dim1d[1] = {CHUNK_SIZE_1}; /* Chunk dimensions */
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): compressed dataset with nested VLEN datatype");
/* set initial data values */
for(i=0; i<DIM_SIZE_1; i++) {
buf[i].p=HDmalloc((i+1)*sizeof(hvl_t));
if(buf[i].p==NULL) {
TestErrPrintf("Cannot allocate memory for VL data! i=%u\n",i);
TEST_ERROR
} /* end if */
buf[i].len=i+1;
for(tvl = (hvl_t *)buf[i].p,j=0; j<(i+1); j++, tvl++) {
tvl->p=HDmalloc((j+1)*sizeof(unsigned int));
if(tvl->p==NULL) {
TestErrPrintf("Cannot allocate memory for VL data! i=%u, j=%u\n",i,j);
TEST_ERROR
} /* end if */
tvl->len=j+1;
for(k=0; k<(j+1); k++)
((unsigned int *)tvl->p)[k]=i*100+j*10+k;
} /* end for */
} /* end for */
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim1d[0]=DIM_SIZE_1;
/* create dataspace */
if((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR
/* create datatype */
if((tid = H5Tvlen_create(H5T_NATIVE_INT)) < 0) TEST_ERROR
/* create nested VL datatype */
if((tid2 = H5Tvlen_create(tid)) < 0) TEST_ERROR
/* create and set chunk plist */
if((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR
if(H5Pset_chunk(pid, 1, chunk_dim1d) < 0) TEST_ERROR
if(H5Pset_deflate(pid, 9) < 0) TEST_ERROR
/* create dataset at SRC file */
if((did = H5Dcreate2(fid_src, NAME_DATASET_VL_VL, tid2, sid, H5P_DEFAULT, pid, H5P_DEFAULT)) < 0) TEST_ERROR
/* write data into file */
if(H5Dwrite(did, tid2, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close compact plist */
if(H5Pclose(pid) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
if(H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* copy the dataset from SRC to DST */
if(H5Ocopy(fid_src, NAME_DATASET_VL_VL, fid_dst, NAME_DATASET_VL_VL, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the dataset for copy */
if((did = H5Dopen2(fid_src, NAME_DATASET_VL_VL, H5P_DEFAULT)) < 0) TEST_ERROR
/* open the destination dataset */
if((did2 = H5Dopen2(fid_dst, NAME_DATASET_VL_VL, H5P_DEFAULT)) < 0) TEST_ERROR
/* Check if the datasets are equal */
if(compare_datasets(did, did2, H5P_DEFAULT, buf) != TRUE) TEST_ERROR
/* close the destination dataset */
if(H5Dclose(did2) < 0) TEST_ERROR
/* close the source dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
/* Reclaim vlen buffer */
if(H5Dvlen_reclaim(tid2, sid, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close datatype */
if(H5Tclose(tid) < 0) TEST_ERROR
if(H5Tclose(tid2) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Pclose(pid);
H5Dclose(did2);
H5Dclose(did);
H5Dvlen_reclaim(tid2, sid, H5P_DEFAULT, buf);
H5Tclose(tid);
H5Tclose(tid2);
H5Sclose(sid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_dataset_compressed_vl_vl */
/*-------------------------------------------------------------------------
* Function: test_copy_option
*
* Purpose: Create a group in SRC file and copy it to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Peter Cao
* March 11, 2006
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
static int
test_copy_option(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl, unsigned flag, hbool_t crt_intermediate_grp, const char* test_desciption)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t sid = -1; /* Dataspace ID */
hid_t did = -1; /* Dataset ID */
hid_t gid=-1, gid2=-1, gid_ref=-1; /* Group IDs */
hid_t gid_sub=-1, gid_sub_sub=-1; /* Sub-group ID */
hid_t pid=-1, lcpl_id=-1; /* Property IDs */
unsigned cpy_flags; /* Object copy flags */
int depth = -1; /* Copy depth */
hsize_t dim2d[2];
int buf[DIM_SIZE_1][DIM_SIZE_2];
int i, j;
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING(test_desciption);
/* set initial data values */
for (i=0; i<DIM_SIZE_1; i++)
for (j=0; j<DIM_SIZE_2; j++)
buf[i][j] = 10000 + 100*i+j;
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* create group at the SRC file */
if((gid = H5Gcreate2(fid_src, NAME_GROUP_TOP, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* attach attributes to the group */
if(test_copy_attach_attributes(gid, H5T_NATIVE_INT) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim2d[0]=DIM_SIZE_1;
dim2d[1]=DIM_SIZE_2;
/* create dataspace */
if((sid = H5Screate_simple(2, dim2d, NULL)) < 0) TEST_ERROR
/* add a dataset to the top group */
if((did = H5Dcreate2(gid, NAME_DATASET_SIMPLE, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
if(H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
if(H5Dclose(did) < 0) TEST_ERROR
/* create a sub-group */
if((gid_sub = H5Gcreate2(fid_src, NAME_GROUP_SUB, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* add a dataset to the sub group */
if((did = H5Dcreate2(gid_sub, NAME_DATASET_SIMPLE, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
if(H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
if(H5Dclose(did) < 0) TEST_ERROR
/* create sub-sub-group */
if((gid_sub_sub = H5Gcreate2(gid_sub, NAME_GROUP_SUB_SUB2, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* add a dataset to the sub sub group */
if((did = H5Dcreate2(gid_sub_sub, NAME_DATASET_SIMPLE, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
if(H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
if(H5Gclose(gid_sub_sub) < 0) TEST_ERROR
if(H5Gclose(gid_sub) < 0) TEST_ERROR
/* close the group */
if(H5Gclose(gid) < 0) FAIL_STACK_ERROR
if((flag & H5O_COPY_EXPAND_SOFT_LINK_FLAG) > 0) {
/* Create group to copy */
if((gid = H5Gcreate2(fid_src, NAME_GROUP_LINK, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR
if(H5Lcreate_soft(NAME_DATASET_SUB_SUB, fid_src, NAME_LINK_SOFT, H5P_DEFAULT, H5P_DEFAULT) < 0) FAIL_STACK_ERROR
if(H5Lcreate_soft("nowhere", fid_src, NAME_LINK_SOFT_DANGLE, H5P_DEFAULT, H5P_DEFAULT) < 0) FAIL_STACK_ERROR
if(H5Gclose(gid) < 0) FAIL_STACK_ERROR
/* Create group to compare with */
if((gid = H5Gcreate2(fid_src, NAME_GROUP_LINK2, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR
if(H5Lcreate_hard(fid_src, NAME_DATASET_SUB_SUB, H5L_SAME_LOC, NAME_LINK_SOFT2, H5P_DEFAULT, H5P_DEFAULT) < 0) FAIL_STACK_ERROR
if(H5Lcreate_soft("nowhere", fid_src, NAME_LINK_SOFT_DANGLE2, H5P_DEFAULT, H5P_DEFAULT) < 0) FAIL_STACK_ERROR
if(H5Gclose(gid) < 0) FAIL_STACK_ERROR
} /* end if */
if((flag & H5O_COPY_EXPAND_REFERENCE_FLAG) > 0) {
if((gid_ref = H5Gcreate2(fid_src, NAME_GROUP_REF, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* create an attribute of object references */
if(attach_ref_attr(fid_src, gid_ref) < 0) TEST_ERROR
/* create an attribute of region references */
if(attach_reg_ref_attr(fid_src, gid_ref) < 0) TEST_ERROR
/* create a dataset of region references */
if(create_reg_ref_dataset(fid_src, gid_ref) < 0) TEST_ERROR
/* Close group holding reference objects */
if(H5Gclose(gid_ref) < 0) TEST_ERROR
} /* end if */
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
/* (except when expanding soft links */
if((flag & H5O_COPY_EXPAND_SOFT_LINK_FLAG) > 0) {
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDWR, fapl)) < 0) TEST_ERROR
} /* end if */
else
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination
files aren't the same */
if(H5Gclose(H5Gcreate2(fid_dst, NAME_GROUP_UNCOPIED, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) TEST_ERROR
/* create property to pass copy options */
if((pid = H5Pcreate(H5P_OBJECT_COPY)) < 0) TEST_ERROR
/* set options for object copy */
if(H5Pset_copy_object(pid, flag) < 0) TEST_ERROR
/* Verify object copy flags */
if(H5Pget_copy_object(pid, &cpy_flags) < 0) TEST_ERROR
if(cpy_flags != flag) TEST_ERROR
/* copy the group from SRC to DST */
if(crt_intermediate_grp) {
/* Create link creation plist to pass in intermediate group creation */
if((lcpl_id = H5Pcreate(H5P_LINK_CREATE)) < 0) TEST_ERROR
if(H5Pset_create_intermediate_group(lcpl_id, TRUE) < 0) TEST_ERROR
if(H5Ocopy(fid_src, NAME_GROUP_TOP, fid_dst, "/new_g0/new_g00", pid, lcpl_id) < 0) TEST_ERROR
if(H5Pclose(lcpl_id) < 0) TEST_ERROR
/* open the group for copy */
if((gid = H5Gopen2(fid_src, NAME_GROUP_TOP, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR
/* open the destination group */
if((gid2 = H5Gopen2(fid_dst, "/new_g0/new_g00", H5P_DEFAULT)) < 0) FAIL_STACK_ERROR
} else if((flag & H5O_COPY_EXPAND_SOFT_LINK_FLAG) > 0) {
if(H5Ocopy(fid_src, NAME_GROUP_LINK, fid_dst, NAME_GROUP_LINK, pid, H5P_DEFAULT) < 0) TEST_ERROR
/* Unlink dataset to copy from original location */
/* (So group comparison works properly) */
if(H5Ldelete(fid_src, NAME_DATASET_SUB_SUB, H5P_DEFAULT) < 0) FAIL_STACK_ERROR
/* open the group for copy */
if((gid = H5Gopen2(fid_src, NAME_GROUP_LINK2, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR
/* open the destination group */
if((gid2 = H5Gopen2(fid_dst, NAME_GROUP_LINK, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR
} else if(flag & (H5O_COPY_WITHOUT_ATTR_FLAG | H5O_COPY_PRESERVE_NULL_FLAG)) {
if(H5Ocopy(fid_src, NAME_GROUP_TOP, fid_dst, NAME_GROUP_TOP, pid, H5P_DEFAULT) < 0) TEST_ERROR
/* open the group for copy */
if((gid = H5Gopen2(fid_src, NAME_GROUP_TOP, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR
/* open the destination group */
if((gid2 = H5Gopen2(fid_dst, NAME_GROUP_TOP, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR
} else if(flag & H5O_COPY_SHALLOW_HIERARCHY_FLAG) {
if(H5Ocopy(fid_src, NAME_GROUP_TOP, fid_dst, NAME_GROUP_TOP, pid, H5P_DEFAULT) < 0) TEST_ERROR
/* open the group for copy */
if((gid = H5Gopen2(fid_src, NAME_GROUP_TOP, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR
/* open the destination group */
if((gid2 = H5Gopen2(fid_dst, NAME_GROUP_TOP, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR
/* Set the copy depth */
depth = 1;
} else if((flag & H5O_COPY_EXPAND_REFERENCE_FLAG) > 0) {
if(H5Ocopy(fid_src, NAME_GROUP_REF, fid_dst, NAME_GROUP_REF, pid, H5P_DEFAULT) < 0) TEST_ERROR
/* open the group for copy */
if((gid = H5Gopen2(fid_src, NAME_GROUP_REF, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR
/* open the destination group */
if((gid2 = H5Gopen2(fid_dst, NAME_GROUP_REF, H5P_DEFAULT)) < 0) FAIL_STACK_ERROR
} else {
/* Unknown flag */
TEST_ERROR
} /* end else */
/* Check if the groups are equal */
if(compare_groups(gid, gid2, pid, depth, flag) != TRUE) TEST_ERROR
if(H5Gclose(gid2) < 0) TEST_ERROR
if(H5Gclose(gid) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
/* close properties */
if(H5Pclose(pid) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Pclose(lcpl_id);
H5Pclose(pid);
H5Sclose(sid);
H5Dclose(did);
H5Gclose(gid_ref);
H5Gclose(gid_sub);
H5Gclose(gid2);
H5Gclose(gid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_option */
/*-------------------------------------------------------------------------
* Function: main
*
* Purpose: Test H5Ocopy()
*
* Tests a number of cases: messages can be stored in the
* new or old format, messages can be shared in either,
* both, or neither of the source and destination files.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Peter Cao
* Friday, September 30, 2005
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
int
main(void)
{
int nerrors = 0;
hid_t fapl, fapl2;
hid_t fcpl_shared, ocpl;
unsigned max_compact, min_dense;
int configuration; /* Configuration of tests. */
int ExpressMode;
/* Setup */
h5_reset();
fapl = h5_fileaccess();
ExpressMode = GetTestExpress();
if (ExpressMode > 1)
printf("***Express test mode on. Some tests may be skipped\n");
/* Copy the file access property list */
if((fapl2 = H5Pcopy(fapl)) < 0) TEST_ERROR
/* Set the "use the latest version of the format" bounds for creating objects in the file */
if(H5Pset_libver_bounds(fapl2, H5F_LIBVER_LATEST, H5F_LIBVER_LATEST) < 0) TEST_ERROR
/* Create an FCPL with sharing enabled */
if((fcpl_shared = H5Pcreate(H5P_FILE_CREATE)) < 0) TEST_ERROR
if(H5Pset_shared_mesg_nindexes(fcpl_shared, 1) < 0) TEST_ERROR
if(H5Pset_shared_mesg_index(fcpl_shared, 0, H5O_SHMESG_ALL_FLAG, (size_t) 10) < 0) TEST_ERROR
/* Obtain the default attribute storage phase change values */
if((ocpl = H5Pcreate(H5P_OBJECT_CREATE)) < 0) TEST_ERROR
if(H5Pget_attr_phase_change(ocpl, &max_compact, &min_dense) < 0) TEST_ERROR
if(H5Pclose(ocpl) < 0) TEST_ERROR
/* Test in all configurations */
for(configuration = 0; configuration <= MAX_CONFIGURATION; configuration++) {
hid_t my_fapl;
hid_t fcpl_src;
hid_t fcpl_dst;
/* Test with and without shared messages */
if(configuration & CONFIG_SHARE_SRC) {
puts("\nTesting with shared src messages:");
fcpl_src = fcpl_shared;
}
else {
puts("\nTesting without shared src messages:");
fcpl_src = H5P_DEFAULT;
}
if(configuration & CONFIG_SHARE_DST) {
puts("Testing with shared dst messages:");
fcpl_dst = fcpl_shared;
}
else {
puts("Testing without shared dst messages:");
fcpl_dst = H5P_DEFAULT;
}
/* Set the FAPL for the type of format */
if(configuration & CONFIG_NEW_FORMAT) {
puts("Testing with new group format:");
my_fapl = fapl2;
} /* end if */
else {
puts("Testing with old group format:");
my_fapl = fapl;
} /* end else */
/* Test with and without dense attributes */
if(configuration & CONFIG_DENSE) {
puts("Testing with dense attributes:");
num_attributes_g = max_compact + 1;
}
else {
puts("Testing without dense attributes:");
num_attributes_g = MAX(min_dense, 2) - 1;
}
/* The tests... */
nerrors += test_copy_dataset_simple(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_dataset_simple_samefile(fcpl_src, my_fapl);
nerrors += test_copy_dataset_simple_empty(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_dataset_compound(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_dataset_chunked(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_dataset_chunked_empty(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_dataset_chunked_sparse(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_dataset_compressed(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_dataset_compact(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_dataset_multi_ohdr_chunks(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_dataset_attr_named_dtype(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_group_empty(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_root_group(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_group(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_group_deep(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_group_loop(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_group_wide_loop(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_group_links(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_soft_link(fcpl_src, fcpl_dst, my_fapl);
#ifndef H5_CANNOT_OPEN_TWICE
nerrors += test_copy_ext_link(fcpl_src, fcpl_dst, my_fapl);
#endif /* H5_CANNOT_OPEN_TWICE */
nerrors += test_copy_exist(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_path(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_option(fcpl_src, fcpl_dst, my_fapl, H5O_COPY_WITHOUT_ATTR_FLAG,
FALSE, "H5Ocopy(): without attributes");
nerrors += test_copy_option(fcpl_src, fcpl_dst, my_fapl, 0, TRUE,
"H5Ocopy(): with missing groups");
nerrors += test_copy_option(fcpl_src, fcpl_dst, my_fapl, H5O_COPY_EXPAND_SOFT_LINK_FLAG,
FALSE, "H5Ocopy(): expand soft link");
nerrors += test_copy_option(fcpl_src, fcpl_dst, my_fapl, H5O_COPY_SHALLOW_HIERARCHY_FLAG,
FALSE, "H5Ocopy(): shallow group copy");
nerrors += test_copy_option(fcpl_src, fcpl_dst, my_fapl, H5O_COPY_EXPAND_REFERENCE_FLAG,
FALSE, "H5Ocopy(): expand object reference");
nerrors += test_copy_option(fcpl_src, fcpl_dst, my_fapl, H5O_COPY_PRESERVE_NULL_FLAG,
FALSE, "H5Ocopy(): preserve NULL messages");
nerrors += test_copy_option(fcpl_src, fcpl_dst, my_fapl, H5O_COPY_WITHOUT_ATTR_FLAG |
H5O_COPY_PRESERVE_NULL_FLAG, TRUE, "H5Ocopy(): preserve NULL messages");
/* Tests that do not use attributes and do not need to be tested
* multiple times for different attribute configurations */
if(configuration < CONFIG_DENSE) {
nerrors += test_copy_named_datatype(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_named_datatype_vl(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_named_datatype_vl_vl(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_dataset_external(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_dataset_named_dtype(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_dataset_named_dtype_hier(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_dataset_named_dtype_hier_outside(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_dataset_contig_vl(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_dataset_chunked_vl(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_dataset_compact_vl(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_dataset_compressed_vl(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_attribute_vl(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_dataset_compact_named_vl(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_dataset_contig_named_vl(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_dataset_chunked_named_vl(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_dataset_compressed_named_vl(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_dataset_compact_vl_vl(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_dataset_contig_vl_vl(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_dataset_chunked_vl_vl(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_dataset_compressed_vl_vl(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_same_file_named_datatype(fcpl_src, my_fapl);
nerrors += test_copy_old_layout(fcpl_dst, my_fapl);
}
/* TODO: not implemented
nerrors += test_copy_option(my_fapl, H5O_COPY_EXPAND_EXT_LINK_FLAG, FALSE, "H5Ocopy: expand external link");
nerrors += test_copy_mount(my_fapl);
*/
} /* end for */
/* Reset file address checking info */
addr_reset();
/* Results */
if(nerrors) {
printf("***** %d OBJECT COPY TEST%s FAILED! *****\n",
nerrors, (1 == nerrors ? "" : "S"));
exit(1);
} /* end if */
puts ("All object copying tests passed.");
h5_cleanup(FILENAME, fapl);
return 0;
error:
return 1;
} /* main */
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