mirror of
https://github.com/HDFGroup/hdf5.git
synced 2024-11-21 01:04:10 +08:00
73683e4380
Migrate from configure macros of XYZ_ABC to H5_XYZ_ABC
Description:
configure generates many macros definitions on the fly and
were stored in src/H5config.h which is included by H5public.h.
But other software that uses hdf5 may also run their own configure.
There can be a clash in macro name space. We decided awhile ago
to prepend all generated macros with "H5_" to avoid conflicts.
The process has started and this commit completes it (at least attempt
to).
Solution:
Many macros symbols (e.g. SIZEOF_xxx and HAVE_xxx were changed to
H5_SIZEOF_xxx and H5_HAVE_xxx). Then H5private.h no longer includes
H5config.h. This cuts H5config.h away from HDF5 source code.
Pending issues:
The module of fortran and pablo are to be resolved in a different
commit.
Platforms tested:
eirene (parallel), arabica (solaris 7 --enable-fortran, --enable-cxx)
506 lines
12 KiB
C
506 lines
12 KiB
C
/*
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* Copyright (C) 1998-2002 NCSA
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* All rights reserved.
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*
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* Programmer: Robb Matzke <matzke@llnl.gov>
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* Wednesday, April 8, 1998
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*/
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#include "h5test.h"
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const char *FILENAME[] = {
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"big",
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NULL
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};
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#define DNAME "big.data"
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#define WRT_N 50
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#define WRT_SIZE 4*1024
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#define FAMILY_SIZE 1024*1024*1024
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#if H5_SIZEOF_LONG_LONG >= 8
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# define GB8LL ((unsigned long_long)8*1024*1024*1024)
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#else
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# define GB8LL 0 /*cannot do the test*/
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#endif
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/* Protocols */
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static void usage(void);
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/*-------------------------------------------------------------------------
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* Function: randll
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*
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* Purpose: Create a random long_long value.
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*
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* Return: Success: Random value
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*
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* Failure: never fails
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*
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* Programmer: Robb Matzke
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* Tuesday, November 24, 1998
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*
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* Modifications:
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*
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*-------------------------------------------------------------------------
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*/
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static hsize_t
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randll(hsize_t limit)
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{
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hsize_t acc = rand ();
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acc *= rand ();
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return acc % limit;
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}
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/*-------------------------------------------------------------------------
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* Function: is_sparse
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*
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* Purpose: Determines if the file system of the current working
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* directory supports holes.
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*
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* Return: Success: Non-zero if holes are supported; zero
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* otherwise.
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*
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* Failure: zero
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*
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* Programmer: Robb Matzke
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* Wednesday, July 15, 1998
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*
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* Modifications:
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*
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*-------------------------------------------------------------------------
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*/
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static int
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is_sparse(void)
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{
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int fd;
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h5_stat_t sb;
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if ((fd=open("x.h5", O_RDWR|O_TRUNC|O_CREAT, 0666))<0) return 0;
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if (lseek(fd, (off_t)(1024*1024), SEEK_SET)!=1024*1024) return 0;
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if (5!=write(fd, "hello", 5)) return 0;
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if (close(fd)<0) return 0;
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if (stat("x.h5", &sb)<0) return 0;
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if (unlink("x.h5")<0) return 0;
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#ifdef H5_HAVE_STAT_ST_BLOCKS
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return ((unsigned long)sb.st_blocks*512 < (unsigned long)sb.st_size);
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#else
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return (0);
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#endif
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}
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/*-------------------------------------------------------------------------
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* Function: enough_room
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*
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* Purpose: Tries to create a bunch of sparse files to see if quotas will
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* get in the way. Some systems also have problems opening
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* enough files and we'll check that too.
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*
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* Return: Success: Non-zero
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*
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* Failure: zero
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*
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* Programmer: Robb Matzke
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* Thursday, August 6, 1998
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*
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* Modifications:
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*
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*-------------------------------------------------------------------------
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*/
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static int
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enough_room(hid_t fapl)
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{
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int ret_value=0;
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int fd[68];
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size_t i, size = (size_t)1 << 30;
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char filename[1024], name[1024];
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/* Initialize file descriptors */
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for (i=0; i<NELMTS(fd); i++) fd[i] = -1;
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/* Get file name template */
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assert(H5FD_FAMILY==H5Pget_driver(fapl));
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h5_fixname(FILENAME[0], fapl, filename, sizeof filename);
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/* Create files */
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for (i=0; i<NELMTS(fd); i++) {
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HDsnprintf(name, sizeof name, filename, i);
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if ((fd[i]=open(name, O_RDWR|O_CREAT|O_TRUNC, 0666))<0) {
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goto done;
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}
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if ((off_t)size != lseek(fd[i], (off_t)size, SEEK_SET)) {
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goto done;
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}
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if (1!=write(fd[i], "X", 1)) {
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goto done;
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}
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}
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ret_value = 1;
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done:
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for (i=0; i<NELMTS(fd) && fd[i]>=0; i++) {
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HDsnprintf(name, sizeof name, filename, i);
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if(close(fd[i])<0)
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ret_value=0;
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unlink(name);
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}
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return ret_value;
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}
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/*-------------------------------------------------------------------------
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* Function: writer
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*
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* Purpose: Creates a *big* dataset.
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*
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* Return: Success: 0
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*
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* Failure: >0
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*
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* Programmer: Robb Matzke
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* Wednesday, April 8, 1998
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*
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* Modifications:
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* Robb Matzke, 15 Jul 1998
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* Addresses are written to the file DNAME instead of stdout.
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*
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*-------------------------------------------------------------------------
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*/
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static int
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writer (hid_t fapl, int wrt_n)
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{
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hsize_t size1[4] = {8, 1024, 1024, 1024};
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hsize_t size2[1] = {GB8LL};
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hssize_t hs_start[1];
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hsize_t hs_size[1];
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hid_t file=-1, space1=-1, space2=-1, mem_space=-1, d1=-1, d2=-1;
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int *buf = malloc (sizeof(int) * WRT_SIZE);
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int i, j;
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FILE *out = fopen(DNAME, "w");
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char filename[1024];
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TESTING("large dataset write");
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/*
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* We might be on a machine that has 32-bit files, so create an HDF5 file
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* which is a family of files. Each member of the family will be 1GB
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*/
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h5_fixname(FILENAME[0], fapl, filename, sizeof filename);
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if ((file=H5Fcreate(filename, H5F_ACC_TRUNC, H5P_DEFAULT, fapl))<0) {
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goto error;
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}
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/* Create simple data spaces according to the size specified above. */
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if ((space1 = H5Screate_simple (4, size1, size1))<0 ||
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(space2 = H5Screate_simple (1, size2, size2))<0) {
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goto error;
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}
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/* Create the datasets */
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if ((d1=H5Dcreate (file, "d1", H5T_NATIVE_INT, space1, H5P_DEFAULT))<0 ||
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(d2=H5Dcreate (file, "d2", H5T_NATIVE_INT, space2, H5P_DEFAULT))<0) {
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goto error;
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}
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/* Write some things to them randomly */
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hs_size[0] = WRT_SIZE;
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if ((mem_space = H5Screate_simple (1, hs_size, hs_size))<0) goto error;
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for (i=0; i<wrt_n; i++) {
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hs_start[0] = randll (size2[0]);
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HDfprintf (out, "#%03d 0x%016Hx\n", i, hs_start[0]);
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if (H5Sselect_hyperslab (space2, H5S_SELECT_SET, hs_start, NULL,
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hs_size, NULL)<0) goto error;
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for (j=0; j<WRT_SIZE; j++) {
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buf[j] = i+1;
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}
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if (H5Dwrite (d2, H5T_NATIVE_INT, mem_space, space2,
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H5P_DEFAULT, buf)<0) goto error;
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}
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if (H5Dclose (d1)<0) goto error;
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if (H5Dclose (d2)<0) goto error;
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if (H5Sclose (mem_space)<0) goto error;
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if (H5Sclose (space1)<0) goto error;
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if (H5Sclose (space2)<0) goto error;
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if (H5Fclose (file)<0) goto error;
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free (buf);
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fclose(out);
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PASSED();
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return 0;
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error:
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H5E_BEGIN_TRY {
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H5Dclose(d1);
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H5Dclose(d2);
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H5Sclose(space1);
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H5Sclose(space2);
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H5Sclose(mem_space);
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H5Fclose(file);
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} H5E_END_TRY;
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if (buf) free(buf);
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if (out) fclose(out);
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return 1;
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}
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/*-------------------------------------------------------------------------
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* Function: reader
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*
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* Purpose: Reads some data from random locations in the dataset.
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*
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* Return: Success: 0
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*
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* Failure: >0
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*
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* Programmer: Robb Matzke
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* Friday, April 10, 1998
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*
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* Modifications:
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*
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*-------------------------------------------------------------------------
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*/
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static int
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reader (hid_t fapl)
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{
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FILE *script = NULL;
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hid_t file=-1, mspace=-1, fspace=-1, d2=-1;
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char ln[128], *s;
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hssize_t hs_offset[1];
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hsize_t hs_size[1] = {WRT_SIZE};
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int *buf = malloc (sizeof(int) * WRT_SIZE);
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int i, j, zero, wrong, nerrors=0;
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char filename[1024];
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/* Open script file */
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script = fopen (DNAME, "r");
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/* Open HDF5 file */
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h5_fixname(FILENAME[0], fapl, filename, sizeof filename);
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if ((file=H5Fopen(filename, H5F_ACC_RDONLY, fapl))<0) goto error;
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/* Open the dataset */
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if ((d2 = H5Dopen (file, "d2"))<0) goto error;
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if ((fspace = H5Dget_space (d2))<0) goto error;
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/* Describe `buf' */
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if ((mspace = H5Screate_simple (1, hs_size, hs_size))<0) goto error;
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/* Read each region */
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while (fgets (ln, sizeof(ln), script)) {
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if ('#'!=ln[0]) break;
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i = (int)strtol (ln+1, &s, 10);
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hs_offset[0] = HDstrtoll (s, NULL, 0);
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HDfprintf (stdout, "#%03d 0x%016Hx%47s", i, hs_offset[0], "");
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fflush (stdout);
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if (H5Sselect_hyperslab (fspace, H5S_SELECT_SET, hs_offset, NULL,
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hs_size, NULL)<0) goto error;
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if (H5Dread (d2, H5T_NATIVE_INT, mspace, fspace, H5P_DEFAULT, buf)<0) {
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goto error;
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}
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/* Check */
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for (j=zero=wrong=0; j<WRT_SIZE; j++) {
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if (0==buf[j]) zero++;
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else if (buf[j]!=i+1) wrong++;
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}
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if (zero) {
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H5_FAILED();
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printf(" %d zero%s\n", zero, 1==zero?"":"s");
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} else if (wrong) {
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SKIPPED();
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puts(" Possible overlap with another region.");
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nerrors++;
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} else {
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PASSED();
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}
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}
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if (H5Dclose (d2)<0) goto error;
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if (H5Sclose (mspace)<0) goto error;
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if (H5Sclose (fspace)<0) goto error;
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if (H5Fclose (file)<0) goto error;
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free (buf);
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fclose (script);
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return nerrors;
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error:
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H5E_BEGIN_TRY {
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H5Dclose(d2);
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H5Sclose(mspace);
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H5Sclose(fspace);
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H5Fclose(file);
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} H5E_END_TRY;
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if (buf) free(buf);
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if (script) fclose(script);
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return 1;
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}
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/*-------------------------------------------------------------------------
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* Function: usage
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*
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* Purpose: Print command usage
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*
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* Return: void
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*
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* Programmer: Albert Chent
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* Mar 28, 2002
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*
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* Modifications:
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*
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*-------------------------------------------------------------------------
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*/
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static void
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usage(void)
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{
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HDfprintf(stdout,
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"Usage: big [-h] [-c] [-fsize <fsize>}\n"
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"\t-h\tPrint the help page\n"
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"\t-c\tFile system Checking skipped. Caution: this test generates\n"
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"\t\tmany big files and may fill up the file system.\n"
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"\t-fsize\tChange family size default to <fsize> where <fsize> is\n"
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"\t\ta positive float point number. Default value is %Hu.\n"
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"Examples:\n"
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"\tbig -fsize 2.1e9 \t# test with file size just under 2GB\n"
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"\tbig -fsize 2.2e9 \t# test with file size just above 2GB\n"
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"\tBe sure the file system can support the file size requested\n"
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, (hsize_t)FAMILY_SIZE);
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}
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/*-------------------------------------------------------------------------
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* Function: main
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*
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* Purpose:
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*
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* Return: Success:
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*
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* Failure:
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*
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* Programmer: Robb Matzke
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* Friday, April 10, 1998
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*
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* Modifications:
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* Albert Cheng, 2002/03/28
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* Added command option -fsize.
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* Albert Cheng, 2002/04/19
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* Added command option -c.
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*
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*-------------------------------------------------------------------------
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*/
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int
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main (int ac, char **av)
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{
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hid_t fapl=-1;
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hsize_t family_size;
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hsize_t family_size_def; /* default family file size */
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double family_size_def_dbl; /* default family file size */
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int cflag=1; /* check file system before test */
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/* parameters setup */
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family_size_def = FAMILY_SIZE;
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while (--ac > 0){
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av++;
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if (strcmp("-fsize", *av)==0){
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/* specify a different family file size */
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ac--; av++;
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if (ac > 0){
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family_size_def_dbl = atof(*av);
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H5_ASSIGN_OVERFLOW(family_size_def,family_size_def_dbl,double,hsize_t);
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if (family_size_def <= 0)
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family_size_def = (hsize_t)FAMILY_SIZE;
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}
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else{
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printf("***Missing fsize value***\n");
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usage();
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return 1;
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}
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}
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else if (strcmp("-c", *av)==0){
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/* turn off file system check before test */
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cflag=0;
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}
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else if (strcmp("-h", *av)==0){
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usage();
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return 0;
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}else{
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usage();
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return 1;
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}
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}
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/* Reset library */
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h5_reset();
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fapl = h5_fileaccess();
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/* The file driver must be the family driver */
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if (H5FD_FAMILY!=H5Pget_driver(fapl)) {
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HDfprintf(stdout,
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"Changing file drivers to the family driver, %Hu bytes each\n",
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family_size_def);
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if (H5Pset_fapl_family(fapl, family_size_def, H5P_DEFAULT)<0) goto error;
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} else if (H5Pget_fapl_family(fapl, &family_size, NULL)<0) {
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goto error;
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} else if (family_size!=family_size_def) {
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HDfprintf(stdout, "Changing family member size from %Hu to %Hu\n",
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family_size, family_size_def);
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if (H5Pset_fapl_family(fapl, family_size_def, H5P_DEFAULT)<0)
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goto error;
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}
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if (cflag){
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/*
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* We shouldn't run this test if the file system doesn't support holes
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* because we would generate multi-gigabyte files.
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*/
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puts("Checking if file system is adequate for this test...");
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if (sizeof(long_long)<8 || 0==GB8LL) {
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puts("Test skipped because sizeof(long_long) is too small. This");
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puts("hardware apparently doesn't support 64-bit integer types.");
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usage();
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goto quit;
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}
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if (!is_sparse()) {
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puts("Test skipped because file system does not support holes.");
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usage();
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goto quit;
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}
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if (!enough_room(fapl)) {
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puts("Test skipped because of quota (file size or num open files).");
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usage();
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goto quit;
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}
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if (sizeof(hsize_t)<=4) {
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puts("Test skipped because the hdf5 library was configured with the");
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puts("--disable-hsizet flag in order to work around a compiler bug.");
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usage();
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goto quit;
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}
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}
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/* Do the test */
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if (writer(fapl, WRT_N)) goto error;
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if (reader(fapl)) goto error;
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puts("All big tests passed.");
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quit:
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/* End with normal exit code */
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if (h5_cleanup(FILENAME, fapl)) remove(DNAME);
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return 0;
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error:
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if (fapl>=0) H5Pclose(fapl);
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puts("*** TEST FAILED ***");
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return 1;
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}
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