mirror of
https://github.com/HDFGroup/hdf5.git
synced 2024-11-27 02:10:55 +08:00
71f3513337
new feature. Description: Added tests of 1wMr with options to apply Atomicity or File_sync. Platforms tested: only tested in eirene and Teragrid as this is just an MPI test. Misc. update:
712 lines
22 KiB
C
712 lines
22 KiB
C
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
|
|
* Copyright by the Board of Trustees of the University of Illinois. *
|
|
* All rights reserved. *
|
|
* *
|
|
* This file is part of HDF5. The full HDF5 copyright notice, including *
|
|
* terms governing use, modification, and redistribution, is contained in *
|
|
* the files COPYING and Copyright.html. COPYING can be found at the root *
|
|
* of the source code distribution tree; Copyright.html can be found at the *
|
|
* root level of an installed copy of the electronic HDF5 document set and *
|
|
* is linked from the top-level documents page. It can also be found at *
|
|
* http://hdf.ncsa.uiuc.edu/HDF5/doc/Copyright.html. If you do not have *
|
|
* access to either file, you may request a copy from hdfhelp@ncsa.uiuc.edu. *
|
|
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
|
|
|
|
/*
|
|
* MPIO independent overlapping writes.
|
|
*
|
|
* First n-1 processes open 1 file.
|
|
* Each of the n-1 process writes chunks of data to the file in round-robin
|
|
* fashion, in a interleaved but not overlapped fashion. Using increasing
|
|
* chunk sizes for the benefits of testing different write sizes and also
|
|
* reducing the numbers of writes.
|
|
*
|
|
* Last process (n-1) just waits.
|
|
* First n-1 processes finish writing and cloose the file.
|
|
* Last process opens the same file and verifies the data.
|
|
*/
|
|
|
|
#include "testphdf5.h"
|
|
|
|
/* FILENAME and filenames must have the same number of names */
|
|
const char *FILENAME[2]={
|
|
"MPItest",
|
|
NULL};
|
|
char filenames[2][200];
|
|
int nerrors = 0;
|
|
int verbose = 0;
|
|
hid_t fapl; /* file access property list */
|
|
|
|
/* protocols */
|
|
static void test_mpio_overlap_writes(char *filename);
|
|
static void test_mpio_gb_file(char *filename);
|
|
static int parse_options(int argc, char **argv);
|
|
static void usage(void);
|
|
|
|
#define MPIO_TEST_WRITE_SIZE 1024*1024 /* 1 MB */
|
|
|
|
void
|
|
test_mpio_overlap_writes(char *filename)
|
|
{
|
|
int mpi_size, mpi_rank;
|
|
MPI_Comm comm;
|
|
MPI_Info info = MPI_INFO_NULL;
|
|
int color, mrc;
|
|
MPI_File fh;
|
|
int i;
|
|
int vrfyerrs;
|
|
char buf[4093]; /* use some prime number for size */
|
|
int bufsize = sizeof(buf);
|
|
int stride;
|
|
MPI_Offset mpi_off;
|
|
MPI_Status mpi_stat;
|
|
|
|
|
|
if (verbose)
|
|
printf("MPIO independent overlapping writes test on file %s\n",
|
|
filename);
|
|
|
|
/* set up MPI parameters */
|
|
MPI_Comm_size(MPI_COMM_WORLD,&mpi_size);
|
|
MPI_Comm_rank(MPI_COMM_WORLD,&mpi_rank);
|
|
|
|
/* Need at least 2 processes */
|
|
if (mpi_size < 2) {
|
|
if (MAINPROCESS)
|
|
printf("Need at least 2 processes to run MPIO test.\n");
|
|
printf(" -SKIP- \n");
|
|
return;
|
|
}
|
|
|
|
/* splits processes 0 to n-2 into one comm. and the last one into another */
|
|
color = ((mpi_rank < (mpi_size - 1)) ? 0 : 1);
|
|
mrc = MPI_Comm_split (MPI_COMM_WORLD, color, mpi_rank, &comm);
|
|
VRFY((mrc==MPI_SUCCESS), "Comm_split succeeded");
|
|
|
|
if (color==0){
|
|
/* First n-1 processes (color==0) open a file and write it */
|
|
mrc = MPI_File_open(comm, filename, MPI_MODE_CREATE|MPI_MODE_RDWR,
|
|
info, &fh);
|
|
VRFY((mrc==MPI_SUCCESS), "");
|
|
|
|
stride = 1;
|
|
mpi_off = mpi_rank*stride;
|
|
while (mpi_off < MPIO_TEST_WRITE_SIZE){
|
|
/* make sure the write does not exceed the TEST_WRITE_SIZE */
|
|
if (mpi_off+stride > MPIO_TEST_WRITE_SIZE)
|
|
stride = MPIO_TEST_WRITE_SIZE - mpi_off;
|
|
|
|
/* set data to some trivial pattern for easy verification */
|
|
for (i=0; i<stride; i++)
|
|
buf[i] = (mpi_off+i) & 0x7f;
|
|
mrc = MPI_File_write_at(fh, mpi_off, buf, stride, MPI_BYTE,
|
|
&mpi_stat);
|
|
VRFY((mrc==MPI_SUCCESS), "");
|
|
|
|
/* move the offset pointer to last byte written by all processes */
|
|
mpi_off += (mpi_size - 1 - mpi_rank) * stride;
|
|
|
|
/* Increase chunk size without exceeding buffer size. */
|
|
/* Then move the starting offset for next write. */
|
|
stride *= 2;
|
|
if (stride > bufsize)
|
|
stride = bufsize;
|
|
mpi_off += mpi_rank*stride;
|
|
}
|
|
|
|
/* close file and free the communicator */
|
|
mrc = MPI_File_close(&fh);
|
|
VRFY((mrc==MPI_SUCCESS), "MPI_FILE_CLOSE");
|
|
mrc = MPI_Comm_free(&comm);
|
|
VRFY((mrc==MPI_SUCCESS), "MPI_Comm_free");
|
|
|
|
/* sync with the other waiting processes */
|
|
mrc = MPI_Barrier(MPI_COMM_WORLD);
|
|
VRFY((mrc==MPI_SUCCESS), "Sync after writes");
|
|
}else{
|
|
/* last process waits till writes are done,
|
|
* then opens file to verify data.
|
|
*/
|
|
mrc = MPI_Barrier(MPI_COMM_WORLD);
|
|
VRFY((mrc==MPI_SUCCESS), "Sync after writes");
|
|
|
|
mrc = MPI_File_open(comm, filename, MPI_MODE_RDONLY,
|
|
info, &fh);
|
|
VRFY((mrc==MPI_SUCCESS), "");
|
|
|
|
stride = bufsize;
|
|
for (mpi_off=0; mpi_off < MPIO_TEST_WRITE_SIZE; mpi_off += bufsize){
|
|
/* make sure it does not read beyond end of data */
|
|
if (mpi_off+stride > MPIO_TEST_WRITE_SIZE)
|
|
stride = MPIO_TEST_WRITE_SIZE - mpi_off;
|
|
mrc = MPI_File_read_at(fh, mpi_off, buf, stride, MPI_BYTE,
|
|
&mpi_stat);
|
|
VRFY((mrc==MPI_SUCCESS), "");
|
|
vrfyerrs=0;
|
|
for (i=0; i<stride; i++){
|
|
char expected;
|
|
expected = (mpi_off+i) & 0x7f;
|
|
if ((buf[i] != expected) &&
|
|
(vrfyerrs++ < MAX_ERR_REPORT || verbose))
|
|
printf("proc %d: found data error at [%ld], expect %d, got %d\n",
|
|
mpi_rank, (long)(mpi_off+i), expected, buf[i]);
|
|
}
|
|
if (vrfyerrs > MAX_ERR_REPORT && !verbose)
|
|
printf("proc %d: [more errors ...]\n", mpi_rank);
|
|
}
|
|
|
|
/* close file and free the communicator */
|
|
mrc = MPI_File_close(&fh);
|
|
VRFY((mrc==MPI_SUCCESS), "MPI_FILE_CLOSE");
|
|
mrc = MPI_Comm_free(&comm);
|
|
VRFY((mrc==MPI_SUCCESS), "MPI_Comm_free");
|
|
}
|
|
|
|
/*
|
|
* one more sync to ensure all processes have done reading
|
|
* before ending this test.
|
|
*/
|
|
mrc = MPI_Barrier(MPI_COMM_WORLD);
|
|
VRFY((mrc==MPI_SUCCESS), "Sync before leaving test");
|
|
}
|
|
|
|
|
|
#define MB 1048576 /* 1024*1024 == 2**20 */
|
|
#define GB 1073741824 /* 1024**3 == 2**30 */
|
|
#define TWO_GB_LESS1 2147483647 /* 2**31 - 1 */
|
|
#define FOUR_GB_LESS1 4294967295L /* 2**32 - 1 */
|
|
/*
|
|
* Verify that MPI_Offset exceeding 2**31 can be computed correctly.
|
|
* Print any failure as information only, not as an error so that this
|
|
* won't abort the remaining test or other separated tests.
|
|
*
|
|
* Test if MPIO can write file from under 2GB to over 2GB and then
|
|
* from under 4GB to over 4GB.
|
|
* Each process writes 1MB in round robin fashion.
|
|
* Then reads the file back in by reverse order, that is process 0
|
|
* reads the data of process n-1 and vice versa.
|
|
*/
|
|
void
|
|
test_mpio_gb_file(char *filename)
|
|
{
|
|
int mpi_size, mpi_rank;
|
|
MPI_Info info = MPI_INFO_NULL;
|
|
int mrc;
|
|
MPI_File fh;
|
|
int i, j, n;
|
|
int vrfyerrs;
|
|
int writerrs; /* write errors */
|
|
int ntimes; /* how many times */
|
|
char *buf = NULL;
|
|
char expected;
|
|
MPI_Offset mpi_off;
|
|
MPI_Offset mpi_off_old;
|
|
MPI_Status mpi_stat;
|
|
int is_signed, sizeof_mpi_offset;
|
|
|
|
|
|
/* set up MPI parameters */
|
|
MPI_Comm_size(MPI_COMM_WORLD,&mpi_size);
|
|
MPI_Comm_rank(MPI_COMM_WORLD,&mpi_rank);
|
|
|
|
if (verbose)
|
|
printf("MPI_Offset range test\n");
|
|
|
|
/* figure out the signness and sizeof MPI_Offset */
|
|
mpi_off = 0;
|
|
is_signed = ((MPI_Offset)(mpi_off - 1)) < 0;
|
|
sizeof_mpi_offset = (int)(sizeof(MPI_Offset));
|
|
|
|
if (MAINPROCESS){ /* only process 0 needs to check it*/
|
|
printf("MPI_Offset is %s %d bytes integeral type\n",
|
|
is_signed ? "signed" : "unsigned", (int)sizeof(MPI_Offset));
|
|
if (sizeof_mpi_offset <= 4 && is_signed){
|
|
printf("Skipped 2GB range test "
|
|
"because MPI_Offset cannot support it\n");
|
|
}else {
|
|
/* verify correctness of assigning 2GB sizes */
|
|
mpi_off = 2 * 1024 * (MPI_Offset)MB;
|
|
INFO((mpi_off>0), "2GB OFFSET assignment no overflow");
|
|
INFO((mpi_off-1)==TWO_GB_LESS1, "2GB OFFSET assignment succeed");
|
|
|
|
/* verify correctness of increasing from below 2 GB to above 2GB */
|
|
mpi_off = TWO_GB_LESS1;
|
|
for (i=0; i < 3; i++){
|
|
mpi_off_old = mpi_off;
|
|
mpi_off = mpi_off + 1;
|
|
/* no overflow */
|
|
INFO((mpi_off>0), "2GB OFFSET increment no overflow");
|
|
/* correct inc. */
|
|
INFO((mpi_off-1)==mpi_off_old, "2GB OFFSET increment succeed");
|
|
}
|
|
}
|
|
|
|
if (sizeof_mpi_offset <= 4){
|
|
printf("Skipped 4GB range test "
|
|
"because MPI_Offset cannot support it\n");
|
|
}else {
|
|
/* verify correctness of assigning 4GB sizes */
|
|
mpi_off = 4 * 1024 * (MPI_Offset)MB;
|
|
INFO((mpi_off>0), "4GB OFFSET assignment no overflow");
|
|
INFO((mpi_off-1)==FOUR_GB_LESS1, "4GB OFFSET assignment succeed");
|
|
|
|
/* verify correctness of increasing from below 4 GB to above 4 GB */
|
|
mpi_off = FOUR_GB_LESS1;
|
|
for (i=0; i < 3; i++){
|
|
mpi_off_old = mpi_off;
|
|
mpi_off = mpi_off + 1;
|
|
/* no overflow */
|
|
INFO((mpi_off>0), "4GB OFFSET increment no overflow");
|
|
/* correct inc. */
|
|
INFO((mpi_off-1)==mpi_off_old, "4GB OFFSET increment succeed");
|
|
}
|
|
}
|
|
}
|
|
|
|
/*================================*/
|
|
if (verbose)
|
|
printf("MPIO GB file test %s\n", filename);
|
|
|
|
if (sizeof_mpi_offset <= 4){
|
|
printf("Skipped GB file range test "
|
|
"because MPI_Offset cannot support it\n");
|
|
}else{
|
|
buf = malloc(MB);
|
|
VRFY((buf!=NULL), "malloc succeed");
|
|
|
|
/* open a new file. Remove it first in case it exists. */
|
|
if (MAINPROCESS)
|
|
remove(filename);
|
|
MPI_Barrier(MPI_COMM_WORLD); /* prevent racing condition */
|
|
|
|
mrc = MPI_File_open(MPI_COMM_WORLD, filename, MPI_MODE_CREATE|MPI_MODE_RDWR,
|
|
info, &fh);
|
|
VRFY((mrc==MPI_SUCCESS), "MPI_FILE_OPEN");
|
|
|
|
printf("MPIO GB file write test %s\n", filename);
|
|
|
|
/* instead of writing every bytes of the file, we will just write
|
|
* some data around the 2 and 4 GB boundaries. That should cover
|
|
* potential integer overflow and filesystem size limits.
|
|
*/
|
|
writerrs = 0;
|
|
for (n=2; n <= 4; n+=2){
|
|
ntimes = GB/MB*n/mpi_size + 1;
|
|
for (i=ntimes-2; i <= ntimes; i++){
|
|
mpi_off = (i*mpi_size + mpi_rank)*(MPI_Offset)MB;
|
|
if (verbose)
|
|
HDfprintf(stdout,"proc %d: write to mpi_off=%016llx, %lld\n",
|
|
mpi_rank, mpi_off, mpi_off);
|
|
/* set data to some trivial pattern for easy verification */
|
|
for (j=0; j<MB; j++)
|
|
*(buf+j) = i*mpi_size + mpi_rank;
|
|
if (verbose)
|
|
HDfprintf(stdout,"proc %d: writing %d bytes at offset %lld\n",
|
|
mpi_rank, MB, mpi_off);
|
|
mrc = MPI_File_write_at(fh, mpi_off, buf, MB, MPI_BYTE, &mpi_stat);
|
|
INFO((mrc==MPI_SUCCESS), "GB size file write");
|
|
if (mrc!=MPI_SUCCESS)
|
|
writerrs++;
|
|
}
|
|
}
|
|
|
|
/* close file and free the communicator */
|
|
mrc = MPI_File_close(&fh);
|
|
VRFY((mrc==MPI_SUCCESS), "MPI_FILE_CLOSE");
|
|
|
|
mrc = MPI_Barrier(MPI_COMM_WORLD);
|
|
VRFY((mrc==MPI_SUCCESS), "Sync after writes");
|
|
|
|
/* open it again to verify the data written */
|
|
/* but only if there was no write errors */
|
|
printf("MPIO GB file read test %s\n", filename);
|
|
if (writerrs){
|
|
printf("proc %d: Skip read test due to previous write errors\n",
|
|
mpi_rank);
|
|
goto finish;
|
|
}
|
|
mrc = MPI_File_open(MPI_COMM_WORLD, filename, MPI_MODE_RDONLY, info, &fh);
|
|
VRFY((mrc==MPI_SUCCESS), "");
|
|
|
|
/* Only read back parts of the file that have been written. */
|
|
for (n=2; n <= 4; n+=2){
|
|
ntimes = GB/MB*n/mpi_size + 1;
|
|
for (i=ntimes-2; i <= ntimes; i++){
|
|
mpi_off = (i*mpi_size + (mpi_size - mpi_rank - 1))*(MPI_Offset)MB;
|
|
if (verbose)
|
|
HDfprintf(stdout,"proc %d: read from mpi_off=%016llx, %lld\n",
|
|
mpi_rank, mpi_off, mpi_off);
|
|
mrc = MPI_File_read_at(fh, mpi_off, buf, MB, MPI_BYTE, &mpi_stat);
|
|
INFO((mrc==MPI_SUCCESS), "GB size file read");
|
|
expected = i*mpi_size + (mpi_size - mpi_rank - 1);
|
|
vrfyerrs=0;
|
|
for (j=0; j<MB; j++){
|
|
if ((*(buf+j) != expected) &&
|
|
(vrfyerrs++ < MAX_ERR_REPORT || verbose))
|
|
printf("proc %d: found data error at [%ld+%d], expect %d, got %d\n",
|
|
mpi_rank, (long)mpi_off, j, expected, *(buf+j));
|
|
}
|
|
if (vrfyerrs > MAX_ERR_REPORT && !verbose)
|
|
printf("proc %d: [more errors ...]\n", mpi_rank);
|
|
|
|
}
|
|
}
|
|
|
|
/* close file and free the communicator */
|
|
mrc = MPI_File_close(&fh);
|
|
VRFY((mrc==MPI_SUCCESS), "MPI_FILE_CLOSE");
|
|
|
|
/*
|
|
* one more sync to ensure all processes have done reading
|
|
* before ending this test.
|
|
*/
|
|
mrc = MPI_Barrier(MPI_COMM_WORLD);
|
|
VRFY((mrc==MPI_SUCCESS), "Sync before leaving test");
|
|
}
|
|
|
|
finish:
|
|
if (buf)
|
|
HDfree(buf);
|
|
}
|
|
|
|
|
|
/*
|
|
* MPI-IO Test: One writes, Many reads.
|
|
* Verify if only one process writes some data and then all other
|
|
* processes can read them back correctly. This tests if the
|
|
* underlaying parallel I/O and file system supports parallel I/O
|
|
* correctly.
|
|
*
|
|
* Algorithm: Only one process (e.g., process 0) writes some data.
|
|
* Then all processes, including the writing process, read the data
|
|
* back and verify them against the original values.
|
|
*/
|
|
|
|
/*
|
|
* Default filename can be specified via first program argument.
|
|
* Each process writes something, then reads all data back.
|
|
*/
|
|
|
|
#define DIMSIZE 32 /* Dimension size. */
|
|
#define PRINTID printf("Proc %d: ", mpi_rank)
|
|
#define USENONE 0
|
|
#define USEATOM 1 /* request atomic I/O */
|
|
#define USEFSYNC 2 /* request file_sync */
|
|
|
|
|
|
test_mpio_1wMr(char *filename, int special_request)
|
|
{
|
|
char hostname[128];
|
|
int mpi_size, mpi_rank;
|
|
MPI_File fh;
|
|
char mpi_err_str[MPI_MAX_ERROR_STRING];
|
|
int mpi_err_strlen;
|
|
int mpi_err;
|
|
unsigned char writedata[DIMSIZE], readdata[DIMSIZE];
|
|
unsigned char expect_val;
|
|
int i, irank;
|
|
int nerrors = 0; /* number of errors */
|
|
int atomicity;
|
|
MPI_Offset mpi_off;
|
|
MPI_Status mpi_stat;
|
|
|
|
MPI_Comm_size(MPI_COMM_WORLD, &mpi_size);
|
|
MPI_Comm_rank(MPI_COMM_WORLD, &mpi_rank);
|
|
|
|
if (mpi_rank==0){
|
|
printf("Testing one process writes, all processes read.\n");
|
|
printf("Using %d processes accessing file %s\n", mpi_size, filename);
|
|
printf(" (Filename can be specified via program argument)\n");
|
|
}
|
|
|
|
/* show the hostname so that we can tell where the processes are running */
|
|
if (gethostname(hostname, 128) < 0){
|
|
PRINTID;
|
|
printf("gethostname failed\n");
|
|
return 1;
|
|
}
|
|
PRINTID;
|
|
printf("hostname=%s\n", hostname);
|
|
|
|
/* Delete any old file in order to start anew. */
|
|
/* Must delete because MPI_File_open does not have a Truncate mode. */
|
|
/* Don't care if it has error. */
|
|
MPI_File_delete(filename, MPI_INFO_NULL);
|
|
|
|
if ((mpi_err = MPI_File_open(MPI_COMM_WORLD, filename,
|
|
MPI_MODE_RDWR | MPI_MODE_CREATE ,
|
|
MPI_INFO_NULL, &fh))
|
|
!= MPI_SUCCESS){
|
|
MPI_Error_string(mpi_err, mpi_err_str, &mpi_err_strlen);
|
|
PRINTID;
|
|
printf("MPI_File_open failed (%s)\n", mpi_err_str);
|
|
return 1;
|
|
}
|
|
|
|
if (special_request & USEATOM){
|
|
/* ==================================================
|
|
* Set atomcity to true (1). A POSIX compliant filesystem
|
|
* should not need this.
|
|
* ==================================================*/
|
|
if ((mpi_err = MPI_File_get_atomicity(fh, &atomicity)) != MPI_SUCCESS){
|
|
MPI_Error_string(mpi_err, mpi_err_str, &mpi_err_strlen);
|
|
PRINTID;
|
|
printf("MPI_File_get_atomicity failed (%s)\n", mpi_err_str);
|
|
}
|
|
printf("Initial atomicity = %d\n", atomicity);
|
|
if ((mpi_err = MPI_File_set_atomicity(fh, 1)) != MPI_SUCCESS){
|
|
MPI_Error_string(mpi_err, mpi_err_str, &mpi_err_strlen);
|
|
PRINTID;
|
|
printf("MPI_File_set_atomicity failed (%s)\n", mpi_err_str);
|
|
}
|
|
if ((mpi_err = MPI_File_get_atomicity(fh, &atomicity)) != MPI_SUCCESS){
|
|
MPI_Error_string(mpi_err, mpi_err_str, &mpi_err_strlen);
|
|
PRINTID;
|
|
printf("MPI_File_get_atomicity failed (%s)\n", mpi_err_str);
|
|
}
|
|
printf("After set_atomicity atomicity = %d\n", atomicity);
|
|
}
|
|
|
|
/* This barrier is not necessary but do it anyway. */
|
|
MPI_Barrier(MPI_COMM_WORLD);
|
|
PRINTID;
|
|
printf("between MPI_Barrier and MPI_File_write_at\n");
|
|
|
|
/* ==================================================
|
|
* Each process calculates what to write but
|
|
* only process irank(0) writes.
|
|
* ==================================================*/
|
|
irank=0;
|
|
for (i=0; i < DIMSIZE; i++)
|
|
writedata[i] = irank*DIMSIZE + i;
|
|
mpi_off = irank*DIMSIZE;
|
|
|
|
/* Only one process writes */
|
|
if (mpi_rank==irank){
|
|
PRINTID; printf("wrote %d bytes at %d\n", DIMSIZE, mpi_off);
|
|
if ((mpi_err = MPI_File_write_at(fh, mpi_off, writedata, DIMSIZE,
|
|
MPI_BYTE, &mpi_stat))
|
|
!= MPI_SUCCESS){
|
|
MPI_Error_string(mpi_err, mpi_err_str, &mpi_err_strlen);
|
|
PRINTID;
|
|
printf("MPI_File_write_at offset(%ld), bytes (%d), failed (%s)\n",
|
|
(long) mpi_off, (int) DIMSIZE, mpi_err_str);
|
|
return 1;
|
|
};
|
|
};
|
|
|
|
/* Bcast the return code and */
|
|
/* make sure all writing are done before reading. */
|
|
MPI_Bcast(&mpi_err, 1, MPI_INT, irank, MPI_COMM_WORLD);
|
|
PRINTID;
|
|
printf("MPI_Bcast: mpi_err = %d\n", mpi_err);
|
|
|
|
if (special_request & USEFSYNC){
|
|
/* ==================================================
|
|
* Do a file sync. A POSIX compliant filesystem
|
|
* should not need this.
|
|
* ==================================================*/
|
|
printf("Apply MPI_File_sync\n");
|
|
/* call file_sync to force the write out */
|
|
if ((mpi_err = MPI_File_sync(fh)) != MPI_SUCCESS){
|
|
MPI_Error_string(mpi_err, mpi_err_str, &mpi_err_strlen);
|
|
PRINTID;
|
|
printf("MPI_File_sync failed (%s)\n", mpi_err_str);
|
|
}
|
|
MPI_Barrier(MPI_COMM_WORLD);
|
|
/* call file_sync to force the write out */
|
|
if ((mpi_err = MPI_File_sync(fh)) != MPI_SUCCESS){
|
|
MPI_Error_string(mpi_err, mpi_err_str, &mpi_err_strlen);
|
|
PRINTID;
|
|
printf("MPI_File_sync failed (%s)\n", mpi_err_str);
|
|
}
|
|
}
|
|
|
|
/* This barrier is not necessary because the Bcase or File_sync above */
|
|
/* should take care of it. Do it anyway. */
|
|
MPI_Barrier(MPI_COMM_WORLD);
|
|
PRINTID;
|
|
printf("after MPI_Barrier\n");
|
|
|
|
/* ==================================================
|
|
* Each process reads what process 0 wrote and verify.
|
|
* ==================================================*/
|
|
irank=0;
|
|
mpi_off = irank*DIMSIZE;
|
|
if ((mpi_err = MPI_File_read_at(fh, mpi_off, readdata, DIMSIZE, MPI_BYTE,
|
|
&mpi_stat))
|
|
!= MPI_SUCCESS){
|
|
MPI_Error_string(mpi_err, mpi_err_str, &mpi_err_strlen);
|
|
PRINTID;
|
|
printf("MPI_File_read_at offset(%ld), bytes (%d), failed (%s)\n",
|
|
(long) mpi_off, (int) DIMSIZE, mpi_err_str);
|
|
return 1;
|
|
};
|
|
for (i=0; i < DIMSIZE; i++){
|
|
expect_val = irank*DIMSIZE + i;
|
|
if (readdata[i] != expect_val){
|
|
PRINTID;
|
|
printf("read data[%d:%d] got %02x, expect %02x\n", irank, i,
|
|
readdata[i], expect_val);
|
|
nerrors++;
|
|
}
|
|
}
|
|
|
|
MPI_File_close(&fh);
|
|
|
|
PRINTID;
|
|
printf("%d data errors detected\n", nerrors);
|
|
|
|
{
|
|
int temp;
|
|
MPI_Reduce(&nerrors, &temp, 1, MPI_INT, MPI_SUM, 0, MPI_COMM_WORLD);
|
|
if (mpi_rank == 0 && temp > 0)
|
|
nerrors = temp;
|
|
}
|
|
|
|
mpi_err = MPI_Barrier(MPI_COMM_WORLD);
|
|
return nerrors;
|
|
}
|
|
|
|
|
|
/*
|
|
* parse the command line options
|
|
*/
|
|
int
|
|
parse_options(int argc, char **argv)
|
|
{
|
|
while (--argc){
|
|
if (**(++argv) != '-'){
|
|
break;
|
|
}else{
|
|
switch(*(*argv+1)){
|
|
case 'v': verbose = 1;
|
|
break;
|
|
case 'f': if (--argc < 1) {
|
|
nerrors++;
|
|
return(1);
|
|
}
|
|
if (**(++argv) == '-') {
|
|
nerrors++;
|
|
return(1);
|
|
}
|
|
paraprefix = *argv;
|
|
break;
|
|
case 'h': /* print help message--return with nerrors set */
|
|
return(1);
|
|
default: nerrors++;
|
|
return(1);
|
|
}
|
|
}
|
|
} /*while*/
|
|
|
|
/* compose the test filenames */
|
|
{
|
|
int i, n;
|
|
hid_t plist;
|
|
|
|
plist = H5Pcreate (H5P_FILE_ACCESS);
|
|
H5Pset_fapl_mpio(plist, MPI_COMM_WORLD, MPI_INFO_NULL);
|
|
n = sizeof(FILENAME)/sizeof(FILENAME[0]) - 1; /* exclude the NULL */
|
|
|
|
for (i=0; i < n; i++)
|
|
if (h5_fixname(FILENAME[i],plist,filenames[i],sizeof(filenames[i]))
|
|
== NULL){
|
|
printf("h5_fixname failed\n");
|
|
nerrors++;
|
|
return(1);
|
|
}
|
|
H5Pclose(plist);
|
|
printf("Test filenames are:\n");
|
|
for (i=0; i < n; i++)
|
|
printf(" %s\n", filenames[i]);
|
|
}
|
|
|
|
return(0);
|
|
}
|
|
|
|
|
|
/*
|
|
* Show command usage
|
|
*/
|
|
void
|
|
usage(void)
|
|
{
|
|
printf("Usage: t_mpi [-v] [-f <prefix>]\n");
|
|
printf("\t-v\t\tverbose on\n");
|
|
printf("\t-f <prefix>\tfilename prefix\n");
|
|
printf("\n");
|
|
}
|
|
|
|
|
|
int
|
|
main(int argc, char **argv)
|
|
{
|
|
int mpi_size, mpi_rank; /* mpi variables */
|
|
int ret_code;
|
|
|
|
MPI_Init(&argc, &argv);
|
|
MPI_Comm_size(MPI_COMM_WORLD, &mpi_size);
|
|
MPI_Comm_rank(MPI_COMM_WORLD, &mpi_rank);
|
|
|
|
if (MAINPROCESS){
|
|
printf("===================================\n");
|
|
printf("MPI functionality tests\n");
|
|
printf("===================================\n");
|
|
}
|
|
H5open();
|
|
h5_show_hostname();
|
|
|
|
fapl = H5Pcreate (H5P_FILE_ACCESS);
|
|
H5Pset_fapl_mpio(fapl, MPI_COMM_WORLD, MPI_INFO_NULL);
|
|
|
|
if (parse_options(argc, argv) != 0){
|
|
if (MAINPROCESS)
|
|
usage();
|
|
goto finish;
|
|
}
|
|
|
|
MPI_BANNER("MPIO 1 write Many read test...");
|
|
ret_code = test_mpio_1wMr(filenames[0], USENONE);
|
|
if (mpi_rank==0 && ret_code > 0)
|
|
printf("***FAILED with %d total errors\n", ret_code);
|
|
MPI_BANNER("MPIO 1 write Many read test with atomicity...");
|
|
ret_code = test_mpio_1wMr(filenames[0], USEATOM);
|
|
if (mpi_rank==0 && ret_code > 0)
|
|
printf("***FAILED with %d total errors\n", ret_code);
|
|
MPI_BANNER("MPIO 1 write Many read test with file sync...");
|
|
ret_code = test_mpio_1wMr(filenames[0], USEFSYNC);
|
|
if (mpi_rank==0 && ret_code > 0)
|
|
printf("***FAILED with %d total errors\n", ret_code);
|
|
MPI_BANNER("MPIO File size range test...");
|
|
test_mpio_gb_file(filenames[0]);
|
|
MPI_BANNER("MPIO independent overlapping writes...");
|
|
test_mpio_overlap_writes(filenames[0]);
|
|
|
|
finish:
|
|
/* make sure all processes are finished before final report, cleanup
|
|
* and exit.
|
|
*/
|
|
MPI_Barrier(MPI_COMM_WORLD);
|
|
if (MAINPROCESS){ /* only process 0 reports */
|
|
printf("===================================\n");
|
|
if (nerrors){
|
|
printf("***MPI tests detected %d errors***\n", nerrors);
|
|
}
|
|
else{
|
|
printf("MPI tests finished with no errors\n");
|
|
}
|
|
printf("===================================\n");
|
|
}
|
|
|
|
h5_cleanup(FILENAME, fapl);
|
|
H5close();
|
|
|
|
/* MPI_Finalize must be called AFTER H5close which may use MPI calls */
|
|
MPI_Finalize();
|
|
|
|
/* always return 0 as this test is informational only. */
|
|
return(0);
|
|
}
|
|
|