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Tested on:
None - eyeballed only
612 lines
22 KiB
Fortran
612 lines
22 KiB
Fortran
! * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
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! Copyright by The HDF Group. *
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! Copyright by the Board of Trustees of the University of Illinois. *
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! All rights reserved. *
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! *
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! This file is part of HDF5. The full HDF5 copyright notice, including *
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! terms governing use, modification, and redistribution, is contained in *
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! the files COPYING and Copyright.html. COPYING can be found at the root *
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! of the source code distribution tree; Copyright.html can be found at the *
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! root level of an installed copy of the electronic HDF5 document set and *
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! is linked from the top-level documents page. It can also be found at *
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! http://hdfgroup.org/HDF5/doc/Copyright.html. If you do not have *
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! access to either file, you may request a copy from help@hdfgroup.org. *
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! * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
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!
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SUBROUTINE attribute_test(cleanup, total_error)
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! This subroutine tests following functionalities:
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! h5acreate_f, h5awrite_f, h5aclose_f,h5aread_f, h5aopen_name_f,
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! h5aget_name_f,h5aget_space_f, h5aget_type_f,
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!
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USE HDF5 ! This module contains all necessary modules
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IMPLICIT NONE
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LOGICAL, INTENT(IN) :: cleanup
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INTEGER, INTENT(OUT) :: total_error
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CHARACTER(LEN=5), PARAMETER :: filename = "atest" !File name
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CHARACTER(LEN=80) :: fix_filename
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CHARACTER(LEN=9), PARAMETER :: dsetname = "atestdset" !Dataset name
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CHARACTER(LEN=11), PARAMETER :: aname = "attr_string" !String Attribute name
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CHARACTER(LEN=14), PARAMETER :: aname2 = "attr_character"!Character Attribute name
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CHARACTER(LEN=11), PARAMETER :: aname3 = "attr_double" !DOuble Attribute name
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CHARACTER(LEN=9), PARAMETER :: aname4 = "attr_real" !Real Attribute name
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CHARACTER(LEN=12), PARAMETER :: aname5 = "attr_integer" !Integer Attribute name
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CHARACTER(LEN=9), PARAMETER :: aname6 = "attr_null" !Null Attribute name
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!
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!data space rank and dimensions
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!
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INTEGER, PARAMETER :: RANK = 2
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INTEGER, PARAMETER :: NX = 4
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INTEGER, PARAMETER :: NY = 5
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INTEGER(HID_T) :: file_id ! File identifier
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INTEGER(HID_T) :: dset_id ! Dataset identifier
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INTEGER(HID_T) :: dataspace ! Dataspace identifier for dataset
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INTEGER(HID_T) :: attr_id !String Attribute identifier
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INTEGER(HID_T) :: attr2_id !Character Attribute identifier
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INTEGER(HID_T) :: attr3_id !Double Attribute identifier
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INTEGER(HID_T) :: attr4_id !Real Attribute identifier
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INTEGER(HID_T) :: attr5_id !Integer Attribute identifier
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INTEGER(HID_T) :: attr6_id !Null Attribute identifier
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INTEGER(HID_T) :: aspace_id !String Attribute Dataspace identifier
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INTEGER(HID_T) :: aspace2_id !Character Attribute Dataspace identifier
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INTEGER(HID_T) :: aspace6_id !Null Attribute Dataspace identifier
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INTEGER(HID_T) :: atype_id !String Attribute Datatype identifier
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INTEGER(HID_T) :: atype2_id !Character Attribute Datatype identifier
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INTEGER(HID_T) :: atype3_id !Double Attribute Datatype identifier
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INTEGER(HID_T) :: atype4_id !Real Attribute Datatype identifier
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INTEGER(HID_T) :: atype5_id !Integer Attribute Datatype identifier
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INTEGER(HSIZE_T), DIMENSION(1) :: adims = (/2/) ! Attribute dimension
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INTEGER(HSIZE_T), DIMENSION(1) :: adims2 = (/1/) ! Attribute dimension
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INTEGER :: arank = 1 ! Attribure rank
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INTEGER(SIZE_T) :: attrlen ! Length of the attribute string
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INTEGER(HID_T) :: attr_space !Returned String Attribute Space identifier
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INTEGER(HID_T) :: attr2_space !Returned other Attribute Space identifier
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INTEGER(HID_T) :: attr_type !Returned Attribute Datatype identifier
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INTEGER(HID_T) :: attr2_type !Returned CHARACTER Attribute Datatype identifier
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INTEGER(HID_T) :: attr3_type !Returned DOUBLE Attribute Datatype identifier
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INTEGER(HID_T) :: attr4_type !Returned REAL Attribute Datatype identifier
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INTEGER(HID_T) :: attr5_type !Returned INTEGER Attribute Datatype identifier
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INTEGER(HID_T) :: attr6_type !Returned NULL Attribute Datatype identifier
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INTEGER :: num_attrs !number of attributes
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INTEGER(HSIZE_T) :: attr_storage ! attributes storage requirements .MSB.
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CHARACTER(LEN=256) :: attr_name !buffer to put attr_name
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INTEGER(SIZE_T) :: name_size = 80 !attribute name length
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CHARACTER(LEN=35), DIMENSION(2) :: attr_data ! String attribute data
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CHARACTER(LEN=35), DIMENSION(2) :: aread_data ! Buffer to put read back
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! string attr data
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CHARACTER :: attr_character_data = 'A'
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DOUBLE PRECISION, DIMENSION(1) :: attr_double_data = 3.459
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REAL, DIMENSION(1) :: attr_real_data = 4.0
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INTEGER, DIMENSION(1) :: attr_integer_data = 5
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INTEGER(HSIZE_T), DIMENSION(7) :: data_dims
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CHARACTER :: aread_character_data ! variable to put read back Character attr data
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INTEGER, DIMENSION(1) :: aread_integer_data ! variable to put read back integer attr data
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INTEGER, DIMENSION(1) :: aread_null_data = 7 ! variable to put read back null attr data
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DOUBLE PRECISION, DIMENSION(1) :: aread_double_data ! variable to put read back double attr data
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REAL, DIMENSION(1) :: aread_real_data ! variable to put read back real attr data
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!
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!general purpose integer
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!
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INTEGER :: i, j
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INTEGER :: error ! Error flag
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!
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!The dimensions for the dataset.
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!
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INTEGER(HSIZE_T), DIMENSION(2) :: dims = (/NX,NY/)
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!
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!data buffers
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!
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INTEGER, DIMENSION(NX,NY) :: data_in
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!
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!Initialize data_in buffer
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!
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DO i = 1, NX
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DO j = 1, NY
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data_in(i,j) = (i-1) + (j-1)
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END DO
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END DO
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!
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! Initialize attribute's data
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!
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attr_data(1) = 'Dataset character attribute'
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attr_data(2) = 'Some other string here '
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attrlen = LEN(attr_data(1))
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!
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! Create the file.
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!
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CALL h5_fixname_f(filename, fix_filename, H5P_DEFAULT_F, error)
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IF (error .NE. 0) THEN
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WRITE(*,*) "Cannot modify file name"
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STOP
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ENDIF
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CALL h5fcreate_f(fix_filename, H5F_ACC_TRUNC_F, file_id, error)
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CALL check("h5fcreate_f",error,total_error)
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!
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!Create data space for the dataset.
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!
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CALL h5screate_simple_f(RANK, dims, dataspace, error)
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CALL check("h5screate_simple_f",error,total_error)
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!
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! create dataset in the file.
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!
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CALL h5dcreate_f(file_id, dsetname, H5T_NATIVE_INTEGER, dataspace, &
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dset_id, error)
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CALL check("h5dcreate_f",error,total_error)
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!
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! Write data_in to the dataset
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!
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data_dims(1) = NX
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data_dims(2) = NY
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CALL h5dwrite_f(dset_id, H5T_NATIVE_INTEGER, data_in, data_dims, error)
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CALL check("h5dwrite_f",error,total_error)
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!
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! Create scalar data space for the String attribute.
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!
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CALL h5screate_simple_f(arank, adims, aspace_id, error)
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CALL check("h5screate_simple_f",error,total_error)
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!
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! Create scalar data space for all other attributes.
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!
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CALL h5screate_simple_f(arank, adims2, aspace2_id, error)
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CALL check("h5screate_simple_f",error,total_error)
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!
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! Create null data space for null attributes.
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!
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CALL h5screate_f(H5S_NULL_F, aspace6_id, error)
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CALL check("h5screate_f",error,total_error)
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!
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! Create datatype for the String attribute.
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!
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CALL h5tcopy_f(H5T_NATIVE_CHARACTER, atype_id, error)
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CALL check("h5tcopy_f",error,total_error)
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CALL h5tset_size_f(atype_id, attrlen, error)
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CALL check("h5tset_size_f",error,total_error)
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!
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! Create datatype for the Character attribute.
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!
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CALL h5tcopy_f(H5T_NATIVE_CHARACTER, atype2_id, error)
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CALL check("h5tcopy_f",error,total_error)
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!
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! Create datatype for the Double attribute.
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!
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CALL h5tcopy_f(H5T_NATIVE_DOUBLE, atype3_id, error)
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CALL check("h5tcopy_f",error,total_error)
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!
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! Create datatype for the Real attribute.
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!
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CALL h5tcopy_f(H5T_NATIVE_REAL, atype4_id, error)
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CALL check("h5tcopy_f",error,total_error)
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!
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! Create datatype for the Integer attribute.
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!
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CALL h5tcopy_f(H5T_NATIVE_INTEGER, atype5_id, error)
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CALL check("h5tcopy_f",error,total_error)
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!
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! Create dataset String attribute.
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!
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CALL h5acreate_f(dset_id, aname, atype_id, aspace_id, &
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attr_id, error)
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CALL check("h5acreate_f",error,total_error)
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!
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! Create dataset CHARACTER attribute.
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!
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CALL h5acreate_f(dset_id, aname2, atype2_id, aspace2_id, &
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attr2_id, error)
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CALL check("h5acreate_f",error,total_error)
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!
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! Create dataset DOUBLE attribute.
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!
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CALL h5acreate_f(dset_id, aname3, atype3_id, aspace2_id, &
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attr3_id, error)
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CALL check("h5acreate_f",error,total_error)
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!
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! Create dataset REAL attribute.
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!
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CALL h5acreate_f(dset_id, aname4, atype4_id, aspace2_id, &
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attr4_id, error)
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CALL check("h5acreate_f",error,total_error)
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!
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! Create dataset INTEGER attribute.
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!
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CALL h5acreate_f(dset_id, aname5, atype5_id, aspace2_id, &
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attr5_id, error)
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CALL check("h5acreate_f",error,total_error)
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!
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! Create dataset NULL attribute of INTEGER.
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!
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CALL h5acreate_f(dset_id, aname6, atype5_id, aspace6_id, &
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attr6_id, error)
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CALL check("h5acreate_f",error,total_error)
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!
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! Write the String attribute data.
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!
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data_dims(1) = 2
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CALL h5awrite_f(attr_id, atype_id, attr_data, data_dims, error)
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CALL check("h5awrite_f",error,total_error)
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!
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! Write the Character attribute data.
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!
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CALL h5awrite_f(attr2_id, atype2_id, attr_character_data, data_dims, error)
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CALL check("h5awrite_f",error,total_error)
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!
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! Write the DOUBLE attribute data.
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!
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data_dims(1) = 1
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CALL h5awrite_f(attr3_id, atype3_id, attr_double_data, data_dims, error)
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CALL check("h5awrite_f",error,total_error)
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!
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! Write the Real attribute data.
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!
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data_dims(1) = 1
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CALL h5awrite_f(attr4_id, atype4_id, attr_real_data, data_dims, error)
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CALL check("h5awrite_f",error,total_error)
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!
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! Write the Integer attribute data.
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!
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data_dims(1) = 1
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CALL h5awrite_f(attr5_id, atype5_id, attr_integer_data, data_dims, error)
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CALL check("h5awrite_f",error,total_error)
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!
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! Write the NULL attribute data(nothing can be written).
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!
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CALL h5awrite_f(attr6_id, atype5_id, attr_integer_data, data_dims, error)
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CALL check("h5awrite_f",error,total_error)
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!
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! check the amount of storage that is required for the specified attribute .MSB.
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!
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CALL h5aget_storage_size_f(attr_id, attr_storage, error)
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CALL check("h5aget_storage_size_f",error,total_error)
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! CALL VERIFY("h5aget_storage_size_f",attr_storage,*SizeOf(attr_storage),total_error)
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CALL h5aget_storage_size_f(attr2_id, attr_storage, error)
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CALL check("h5aget_storage_size_f",error,total_error)
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! CALL verify("h5aget_storage_size_f",attr_storage,1,total_error)
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CALL h5aget_storage_size_f(attr3_id, attr_storage, error)
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CALL check("h5aget_storage_size_f",error,total_error)
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! CALL verify("h5aget_storage_size_f",attr_storage,8,total_error)
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CALL h5aget_storage_size_f(attr4_id, attr_storage, error)
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CALL check("h5aget_storage_size_f",error,total_error)
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! CALL verify("h5aget_storage_size_f",attr_storage,4,total_error)
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CALL h5aget_storage_size_f(attr5_id, attr_storage, error)
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CALL check("h5aget_storage_size_f",error,total_error)
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! CALL verify("h5aget_storage_size_f",attr_storage,4,total_error)
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CALL h5aget_storage_size_f(attr6_id, attr_storage, error)
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CALL check("h5aget_storage_size_f",error,total_error)
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! CALL verify("h5aget_storage_size_f",attr_storage,0,total_error)
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!
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! Close the attribute.
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!
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CALL h5aclose_f(attr_id, error)
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CALL check("h5aclose_f",error,total_error)
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CALL h5aclose_f(attr2_id, error)
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CALL check("h5aclose_f",error,total_error)
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CALL h5aclose_f(attr3_id, error)
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CALL check("h5aclose_f",error,total_error)
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CALL h5aclose_f(attr4_id, error)
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CALL check("h5aclose_f",error,total_error)
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CALL h5aclose_f(attr5_id, error)
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CALL check("h5aclose_f",error,total_error)
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CALL h5aclose_f(attr6_id, error)
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CALL check("h5aclose_f",error,total_error)
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CALL h5tclose_f(atype_id, error)
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CALL check("h5tclose_f",error,total_error)
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CALL h5tclose_f(atype2_id, error)
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CALL check("h5tclose_f",error,total_error)
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CALL h5tclose_f(atype3_id, error)
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CALL check("h5tclose_f",error,total_error)
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CALL h5tclose_f(atype4_id, error)
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CALL check("h5tclose_f",error,total_error)
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CALL h5tclose_f(atype5_id, error)
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CALL check("h5tclose_f",error,total_error)
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!
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! Terminate access to the data space.
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!
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CALL h5sclose_f(aspace_id, error)
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CALL check("h5sclose_f",error,total_error)
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CALL h5sclose_f(aspace2_id, error)
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CALL check("h5sclose_f",error,total_error)
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CALL h5sclose_f(aspace6_id, error)
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CALL check("h5sclose_f",error,total_error)
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!
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! Terminate access to the dataset.
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!
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CALL h5dclose_f(dset_id, error)
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CALL check("h5dclose_f",error,total_error)
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!
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! Terminate access to the file.
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!
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CALL h5fclose_f(file_id, error)
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CALL check("h5fclose_f",error,total_error)
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!
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! Open file
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!
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CALL h5fopen_f(fix_filename, H5F_ACC_RDWR_F, file_id, error)
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CALL check("h5open_f",error,total_error)
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!
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! Reopen dataset
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!
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CALL h5dopen_f(file_id, dsetname, dset_id, error)
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CALL check("h5dopen_f",error,total_error)
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!
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!open the String attrbute by name
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!
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CALL h5aopen_name_f(dset_id, aname, attr_id, error)
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CALL check("h5aopen_name_f",error,total_error)
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!
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!open the CHARACTER attrbute by name
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!
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CALL h5aopen_name_f(dset_id, aname2, attr2_id, error)
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CALL check("h5aopen_name_f",error,total_error)
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!
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!open the DOUBLE attrbute by name
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!
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CALL h5aopen_name_f(dset_id, aname3, attr3_id, error)
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CALL check("h5aopen_name_f",error,total_error)
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!
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!open the REAL attrbute by name
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!
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CALL h5aopen_name_f(dset_id, aname4, attr4_id, error)
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CALL check("h5aopen_name_f",error,total_error)
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!
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!open the INTEGER attrbute by name
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!
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CALL h5aopen_name_f(dset_id, aname5, attr5_id, error)
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CALL check("h5aopen_idx_f",error,total_error)
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!
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!open the NULL attrbute by name
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!
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CALL h5aopen_name_f(dset_id, aname6, attr6_id, error)
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CALL check("h5aopen_idx_f",error,total_error)
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!
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!get the attrbute name
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!
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CALL h5aget_name_f(attr5_id, name_size, attr_name, error)
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CALL check("h5aget_name_f",error,total_error)
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IF (attr_name(1:12) .NE. aname5) THEN
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total_error = total_error + 1
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END IF
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IF (error .NE. 12) THEN
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total_error = total_error + 1
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END IF
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!
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!get the STRING attrbute space
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!
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CALL h5aget_space_f(attr_id, attr_space, error)
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CALL check("h5aget_space_f",error,total_error)
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!
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!get other attrbute space
|
|
!
|
|
CALL h5aget_space_f(attr2_id, attr2_space, error)
|
|
CALL check("h5aget_space_f",error,total_error)
|
|
!
|
|
!get the string attrbute datatype
|
|
!
|
|
CALL h5aget_type_f(attr_id, attr_type, error)
|
|
CALL check("h5aget_type_f",error,total_error)
|
|
!
|
|
!get the character attrbute datatype
|
|
!
|
|
CALL h5aget_type_f(attr2_id, attr2_type, error)
|
|
CALL check("h5aget_type_f",error,total_error)
|
|
!
|
|
!get the double attrbute datatype
|
|
!
|
|
CALL h5aget_type_f(attr3_id, attr3_type, error)
|
|
CALL check("h5aget_type_f",error,total_error)
|
|
!
|
|
!get the real attrbute datatype
|
|
!
|
|
CALL h5aget_type_f(attr4_id, attr4_type, error)
|
|
CALL check("h5aget_type_f",error,total_error)
|
|
|
|
!
|
|
!get the integer attrbute datatype
|
|
!
|
|
CALL h5aget_type_f(attr5_id, attr5_type, error)
|
|
CALL check("h5aget_type_f",error,total_error)
|
|
|
|
!
|
|
!get the null attrbute datatype
|
|
!
|
|
CALL h5aget_type_f(attr6_id, attr6_type, error)
|
|
CALL check("h5aget_type_f",error,total_error)
|
|
|
|
!
|
|
!get number of attributes
|
|
!
|
|
CALL h5aget_num_attrs_f(dset_id, num_attrs, error)
|
|
CALL check("h5aget_num_attrs_f",error,total_error)
|
|
IF (num_attrs .NE. 6) THEN
|
|
WRITE(*,*) "got number of attributes wrong", num_attrs
|
|
total_error = total_error +1
|
|
END IF
|
|
|
|
!
|
|
!set the read back data type's size
|
|
!
|
|
CALL h5tcopy_f(H5T_NATIVE_CHARACTER, atype_id, error)
|
|
CALL check("h5tcopy_f",error,total_error)
|
|
|
|
CALL h5tset_size_f(atype_id, attrlen, error)
|
|
CALL check("h5tset_size_f",error,total_error)
|
|
!
|
|
!read the string attribute data back to memory
|
|
!
|
|
data_dims(1) = 2
|
|
CALL h5aread_f(attr_id, atype_id, aread_data, data_dims, error)
|
|
CALL check("h5aread_f",error,total_error)
|
|
|
|
IF ( (aread_data(1) .NE. attr_data(1)) .OR. (aread_data(2) .NE. attr_data(2)) ) THEN
|
|
WRITE(*,*) "Read back string attrbute is wrong", aread_data(1), aread_data(2)
|
|
total_error = total_error + 1
|
|
END IF
|
|
|
|
!
|
|
!read the CHARACTER attribute data back to memory
|
|
!
|
|
CALL h5aread_f(attr2_id, H5T_NATIVE_CHARACTER, aread_character_data, data_dims, error)
|
|
CALL check("h5aread_f",error,total_error)
|
|
IF (aread_character_data .NE. 'A' ) THEN
|
|
WRITE(*,*) "Read back character attrbute is wrong ",aread_character_data
|
|
total_error = total_error + 1
|
|
END IF
|
|
!
|
|
!read the double attribute data back to memory
|
|
!
|
|
data_dims(1) = 1
|
|
CALL h5aread_f(attr3_id, H5T_NATIVE_DOUBLE, aread_double_data, data_dims, error)
|
|
CALL check("h5aread_f",error,total_error)
|
|
IF (aread_double_data(1) .NE. 3.459 ) THEN
|
|
WRITE(*,*) "Read back double attrbute is wrong", aread_double_data(1)
|
|
total_error = total_error + 1
|
|
END IF
|
|
!
|
|
!read the real attribute data back to memory
|
|
!
|
|
data_dims(1) = 1
|
|
CALL h5aread_f(attr4_id, H5T_NATIVE_REAL, aread_real_data, data_dims, error)
|
|
CALL check("h5aread_f",error,total_error)
|
|
IF (aread_real_data(1) .NE. 4.0 ) THEN
|
|
WRITE(*,*) "Read back real attrbute is wrong ", aread_real_data
|
|
total_error = total_error + 1
|
|
END IF
|
|
!
|
|
!read the Integer attribute data back to memory
|
|
!
|
|
data_dims(1) = 1
|
|
CALL h5aread_f(attr5_id, H5T_NATIVE_INTEGER, aread_integer_data, data_dims, error)
|
|
CALL check("h5aread_f",error,total_error)
|
|
IF (aread_integer_data(1) .NE. 5 ) THEN
|
|
WRITE(*,*) "Read back integer attrbute is wrong ", aread_integer_data
|
|
total_error = total_error + 1
|
|
END IF
|
|
!
|
|
!read the null attribute data. nothing can be read.
|
|
!
|
|
data_dims(1) = 1
|
|
CALL h5aread_f(attr6_id, H5T_NATIVE_INTEGER, aread_null_data, data_dims, error)
|
|
CALL check("h5aread_f",error,total_error)
|
|
IF (aread_null_data(1) .NE. 7 ) THEN
|
|
WRITE(*,*) "Read back null attrbute is wrong ", aread_null_data
|
|
total_error = total_error + 1
|
|
END IF
|
|
|
|
!
|
|
! Close the attribute.
|
|
!
|
|
CALL h5aclose_f(attr_id, error)
|
|
CALL check("h5aclose_f",error,total_error)
|
|
CALL h5aclose_f(attr2_id, error)
|
|
CALL check("h5aclose_f",error,total_error)
|
|
CALL h5aclose_f(attr3_id, error)
|
|
CALL check("h5aclose_f",error,total_error)
|
|
CALL h5aclose_f(attr4_id, error)
|
|
CALL check("h5aclose_f",error,total_error)
|
|
CALL h5aclose_f(attr5_id, error)
|
|
CALL check("h5aclose_f",error,total_error)
|
|
CALL h5aclose_f(attr6_id, error)
|
|
CALL check("h5aclose_f",error,total_error)
|
|
|
|
!
|
|
! Delete the attribute from the Dataset.
|
|
!
|
|
CALL h5adelete_f(dset_id, aname, error)
|
|
CALL check("h5adelete_f",error,total_error)
|
|
|
|
!
|
|
!get number of attributes
|
|
!
|
|
CALL h5aget_num_attrs_f(dset_id, num_attrs, error)
|
|
CALL check("h5aget_num_attrs_f",error,total_error)
|
|
IF (num_attrs .NE. 5) THEN
|
|
WRITE(*,*) "got number of attributes wrong", num_attrs
|
|
total_error = total_error +1
|
|
END IF
|
|
|
|
|
|
|
|
CALL h5sclose_f(attr_space, error)
|
|
CALL check("h5sclose_f",error,total_error)
|
|
CALL h5sclose_f(attr2_space, error)
|
|
CALL check("h5sclose_f",error,total_error)
|
|
|
|
!
|
|
! Terminate access to the data type.
|
|
!
|
|
CALL h5tclose_f(attr_type, error)
|
|
CALL check("h5tclose_f",error,total_error)
|
|
CALL h5tclose_f(attr2_type, error)
|
|
CALL check("h5tclose_f",error,total_error)
|
|
CALL h5tclose_f(attr3_type, error)
|
|
CALL check("h5tclose_f",error,total_error)
|
|
CALL h5tclose_f(attr4_type, error)
|
|
CALL check("h5tclose_f",error,total_error)
|
|
CALL h5tclose_f(attr5_type, error)
|
|
CALL check("h5tclose_f",error,total_error)
|
|
CALL h5tclose_f(attr6_type, error)
|
|
CALL check("h5tclose_f",error,total_error)
|
|
|
|
!
|
|
! End access to the dataset and release resources used by it.
|
|
!
|
|
CALL h5dclose_f(dset_id, error)
|
|
CALL check("h5dclose_f",error,total_error)
|
|
|
|
!
|
|
! Close the file.
|
|
!
|
|
CALL h5fclose_f(file_id, error)
|
|
CALL check("h5fclose_f",error,total_error)
|
|
!
|
|
! Remove the file
|
|
!
|
|
IF (cleanup) CALL h5_cleanup_f(filename, H5P_DEFAULT_F, error)
|
|
|
|
RETURN
|
|
END SUBROUTINE attribute_test
|