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f40a245ce2
hdf5/tools/h5repack/h5repack.sh.in
Albert Cheng f40a245ce2 [svn-r18055] Bug fix: 1192 
Description:
Fixed exit code (sometimes return code in Main) to follow the HDF5 standards.

Tested:
H5committested plus serial test in Jam.
2009-12-26 03:36:37 -05:00

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#! /bin/sh
#
# Copyright by The HDF Group.
# Copyright by the Board of Trustees of the University of Illinois.
# All rights reserved.
#
# This file is part of HDF5. The full HDF5 copyright notice, including
# terms governing use, modification, and redistribution, is contained in
# the files COPYING and Copyright.html. COPYING can be found at the root
# of the source code distribution tree; Copyright.html can be found at the
# root level of an installed copy of the electronic HDF5 document set and
# is linked from the top-level documents page. It can also be found at
# http://hdfgroup.org/HDF5/doc/Copyright.html. If you do not have
# access to either file, you may request a copy from help@hdfgroup.org.
#
# Tests for the h5repack tool
#
# Modification:
# Pedro Vicente Nunes, 11/15/2006
# Added $FILEN variables for file names
#
USE_FILTER_SZIP="@USE_FILTER_SZIP@"
USE_FILTER_DEFLATE="@USE_FILTER_DEFLATE@"
USE_FILTER_SHUFFLE="@USE_FILTER_SHUFFLE@"
USE_FILTER_FLETCHER32="@USE_FILTER_FLETCHER32@"
USE_FILTER_NBIT="@USE_FILTER_NBIT@"
USE_FILTER_SCALEOFFSET="@USE_FILTER_SCALEOFFSET@"
TESTNAME=h5repack
EXIT_SUCCESS=0
EXIT_FAILURE=1
H5REPACK=h5repack # The tool name
H5REPACK_BIN=`pwd`/$H5REPACK # The path of the tool binary
H5DIFF=../h5diff/h5diff # The h5diff tool name
H5DIFF_BIN=`pwd`/$H5DIFF # The path of the h5diff tool binary
H5DETECTSZIP=testh5repack_detect_szip
H5DETECTSZIP_BIN=`pwd`/$H5DETECTSZIP
INFO_FILE=testfiles/h5repack.info
FILE0=h5repack_fill.h5
FILE1=h5repack_objs.h5
FILE2=h5repack_attr.h5
FILE3=h5repack_hlink.h5
FILE4=h5repack_layout.h5
FILE5=h5repack_early.h5
FILE7=h5repack_szip.h5
FILE8=h5repack_deflate.h5
FILE9=h5repack_shuffle.h5
FILE10=h5repack_fletcher.h5
FILE11=h5repack_filters.h5
FILE12=h5repack_nbit.h5
FILE13=h5repack_soffset.h5
FILE14=h5repack_layouto.h5 # A file with an older version of the layout message
# (copy of test/tlayouto.h5)
FILE15=h5repack_named_dtypes.h5
FILE16=tfamily%05d.h5 # located in common testfiles folder
nerrors=0
verbose=yes
# The build (current) directory might be different than the source directory.
#
if test -z "$srcdir"; then
srcdir=.
fi
# Print a line-line message left justified in a field of 70 characters
# beginning with the word "Testing".
#
TESTING() {
SPACES=" "
echo "Testing $* $SPACES" | cut -c1-70 | tr -d '\012'
}
# Print a line-line message left justified in a field of 70 characters
# beginning with the word "Verifying".
#
VERIFY() {
SPACES=" "
echo "Verifying h5diff output $* $SPACES" | cut -c1-70 | tr -d '\012'
}
# Print a message that a test has been skipped (because a required filter
# was unavailable)
SKIP() {
TESTING $H5REPACK $@
echo " -SKIP-"
}
# Call the h5diff tool
#
DIFFTEST()
{
VERIFY $@
$RUNSERIAL $H5DIFF_BIN -q "$@"
RET=$?
if [ $RET != 0 ] ; then
echo "*FAILED*"
nerrors="`expr $nerrors + 1`"
else
echo " PASSED"
fi
}
# Call h5repack
#
TOOLTEST()
{
# Run test.
TESTING $H5REPACK $@
infile=$srcdir/testfiles/$1
path=`pwd`
outfile=$path/out.$1
shift
$RUNSERIAL $H5REPACK_BIN "$@" $infile $outfile
RET=$?
if [ $RET != 0 ] ; then
echo "*FAILED*"
nerrors="`expr $nerrors + 1`"
else
echo " PASSED"
DIFFTEST $infile $outfile
fi
rm -f $outfile
}
# same as TOOLTEST, but it uses the old syntax -i input_file -o output_file
#
TOOLTEST0()
{
# Run test.
TESTING $H5REPACK $@
infile=$srcdir/testfiles/$1
path=`pwd`
outfile=$path/out.$1
shift
$RUNSERIAL $H5REPACK_BIN -i $infile -o $outfile "$@"
RET=$?
if [ $RET != 0 ] ; then
echo "*FAILED*"
nerrors="`expr $nerrors + 1`"
else
echo " PASSED"
DIFFTEST $infile $outfile
fi
rm -f $outfile
}
# same as TOOLTEST, but it uses the common testfiles at $srcdir/../testfiles/
# used to test the family driver, where these files reside
#
TOOLTEST1()
{
# Run test.
TESTING $H5REPACK $@
infile=$srcdir/../testfiles/$1
path=`pwd`
outfile=$path/out.$1
shift
$RUNSERIAL $H5REPACK_BIN "$@" $infile $outfile
RET=$?
if [ $RET != 0 ] ; then
echo "*FAILED*"
nerrors="`expr $nerrors + 1`"
else
echo " PASSED"
DIFFTEST $infile $outfile
fi
rm -f $outfile
}
#
# The tests
# We use the files generated by h5repacktst
# Each run generates "<file>.out.h5" and the tool h5diff is used to
# compare the input and output files
#
# the tests are the same as the program h5repacktst, but run from the CLI
#
# See which filters are usable (and skip tests for filters we
# don't have). Do this by searching H5pubconf.h to see which
# filters are defined.
# detect whether the encoder is present.
USE_FILTER_SZIP_ENCODER="no";
if test $USE_FILTER_SZIP = "yes"; then
USE_FILTER_SZIP_ENCODER=`$RUNSERIAL $H5DETECTSZIP_BIN`
fi
# copy files (these files have no filters)
TOOLTEST $FILE0
TOOLTEST $FILE1
TOOLTEST $FILE2
TOOLTEST $FILE3
TOOLTEST $FILE4
TOOLTEST $FILE5
# use $FILE4 to write some filters (this file has no filters)
# gzip with individual object
arg="$FILE4 -f dset1:GZIP=1 -l dset1:CHUNK=20x10"
if test $USE_FILTER_DEFLATE != "yes" ; then
SKIP $arg
else
TOOLTEST $arg
fi
# gzip for all
arg="$FILE4 -f GZIP=1"
if test $USE_FILTER_DEFLATE != "yes" ; then
SKIP $arg
else
TOOLTEST $arg
fi
# szip with individual object
arg="$FILE4 -f dset2:SZIP=8,EC -l dset2:CHUNK=20x10"
if test $USE_FILTER_SZIP_ENCODER != "yes" -o $USE_FILTER_SZIP != "yes" ; then
SKIP $arg
else
TOOLTEST $arg
fi
# szip for all
arg="$FILE4 -f SZIP=8,NN"
if test $USE_FILTER_SZIP_ENCODER != "yes" -o $USE_FILTER_SZIP != "yes" ; then
SKIP $arg
else
TOOLTEST $arg
fi
# shuffle with individual object
arg="$FILE4 -f dset2:SHUF -l dset2:CHUNK=20x10"
if test $USE_FILTER_SHUFFLE != "yes" ; then
SKIP $arg
else
TOOLTEST $arg
fi
# shuffle for all
arg="$FILE4 -f SHUF"
if test $USE_FILTER_SHUFFLE != "yes" ; then
SKIP $arg
else
TOOLTEST $arg
fi
# fletcher32 with individual object
arg="$FILE4 -f dset2:FLET -l dset2:CHUNK=20x10"
if test $USE_FILTER_FLETCHER32 != "yes" ; then
SKIP $arg
else
TOOLTEST $arg
fi
# fletcher32 for all
arg="$FILE4 -f FLET"
if test $USE_FILTER_FLETCHER32 != "yes" ; then
SKIP $arg
else
TOOLTEST $arg
fi
# all filters
arg="$FILE4 -f dset2:SHUF -f dset2:FLET -f dset2:SZIP=8,NN -f dset2:GZIP=1 -l dset2:CHUNK=20x10"
if test $USE_FILTER_SZIP_ENCODER != "yes" -o $USE_FILTER_SZIP != "yes" -o $USE_FILTER_SHUFFLE != "yes" -o $USE_FILTER_FLETCHER32 != "yes" -o $USE_FILTER_DEFLATE != "yes" ; then
SKIP $arg
else
TOOLTEST $arg
fi
###########################################################
# the following tests assume the input files have filters
###########################################################
# szip copy
arg="$FILE7"
if test $USE_FILTER_SZIP_ENCODER != "yes" -o $USE_FILTER_SZIP != "yes" ; then
SKIP $arg
else
TOOLTEST $arg
fi
# szip remove
arg="$FILE7 --filter=dset_szip:NONE"
if test $USE_FILTER_SZIP_ENCODER != "yes" -o $USE_FILTER_SZIP != "yes" ; then
SKIP $arg
else
TOOLTEST $arg
fi
# deflate copy
arg="$FILE8"
if test $USE_FILTER_DEFLATE != "yes" ; then
SKIP $arg
else
TOOLTEST $arg
fi
# deflate remove
arg="$FILE8 -f dset_deflate:NONE"
if test $USE_FILTER_DEFLATE != "yes" ; then
SKIP $arg
else
TOOLTEST $arg
fi
# shuffle copy
arg="$FILE9"
if test $USE_FILTER_SHUFFLE != "yes" ; then
SKIP $arg
else
TOOLTEST $arg
fi
# shuffle remove
arg="$FILE9 -f dset_shuffle:NONE"
if test $USE_FILTER_SHUFFLE != "yes" ; then
SKIP $arg
else
TOOLTEST $arg
fi
# fletcher32 copy
arg="$FILE10"
if test $USE_FILTER_FLETCHER32 != "yes" ; then
SKIP $arg
else
TOOLTEST $arg
fi
# fletcher32 remove
arg="$FILE10 -f dset_fletcher32:NONE"
if test $USE_FILTER_FLETCHER32 != "yes" ; then
SKIP $arg
else
TOOLTEST $arg
fi
# nbit copy
arg="$FILE12"
if test $USE_FILTER_NBIT != "yes" ; then
SKIP $arg
else
TOOLTEST $arg
fi
# nbit remove
arg="$FILE12 -f dset_nbit:NONE"
if test $USE_FILTER_NBIT != "yes" ; then
SKIP $arg
else
TOOLTEST $arg
fi
# nbit add
arg="$FILE12 -f dset_int31:NBIT"
if test $USE_FILTER_NBIT != "yes" ; then
SKIP $arg
else
TOOLTEST $arg
fi
# scaleoffset copy
arg="$FILE13"
if test $USE_FILTER_SCALEOFFSET != "yes" ; then
SKIP $arg
else
TOOLTEST $arg
fi
# scaleoffset add
arg="$FILE13 -f dset_none:SOFF=31,IN"
if test $USE_FILTER_SCALEOFFSET != "yes" ; then
SKIP $arg
else
TOOLTEST $arg
fi
# scaleoffset remove
arg="$FILE13 -f dset_scaleoffset:NONE"
if test $USE_FILTER_SCALEOFFSET != "yes" ; then
SKIP $arg
else
TOOLTEST $arg
fi
# remove all filters
arg="$FILE11 -f NONE"
if test $USE_FILTER_FLETCHER32 != "yes" -o $USE_FILTER_DEFLATE != "yes" -o $USE_FILTER_SZIP != "yes" -o $USE_FILTER_SZIP_ENCODER != "yes" -o $USE_FILTER_SHUFFLE != "yes" -o $USE_FILTER_NBIT != "yes" -o $USE_FILTER_SCALEOFFSET != "yes" ; then
SKIP $arg
else
TOOLTEST $arg
fi
#filter conversions
arg="$FILE8 -f dset_deflate:SZIP=8,NN"
if test $USE_FILTER_SZIP_ENCODER != "yes" -o $USE_FILTER_SZIP != "yes" -o $USE_FILTER_DEFLATE != "yes" ; then
SKIP $arg
else
TOOLTEST $arg
fi
arg="$FILE7 -f dset_szip:GZIP=1"
if test $USE_FILTER_SZIP != "yes" -o $USE_FILTER_SZIP_ENCODER != "yes" -o $USE_FILTER_DEFLATE != "yes" ; then
SKIP $arg
else
TOOLTEST $arg
fi
#limit
arg="$FILE4 -f GZIP=1 -m 1024"
if test $USE_FILTER_DEFLATE != "yes" ; then
SKIP $arg
else
TOOLTEST $arg
fi
#file
arg="$FILE4 -e $INFO_FILE"
if test $USE_FILTER_DEFLATE != "yes" ; then
SKIP $arg
else
TOOLTEST $arg
fi
#########################################################
# layout options (these files have no filters)
#########################################################
TOOLTEST $FILE4 --layout=dset2:CHUNK=20x10
TOOLTEST $FILE4 -l CHUNK=20x10
TOOLTEST $FILE4 -l dset2:CONTI
TOOLTEST $FILE4 -l CONTI
TOOLTEST $FILE4 -l dset2:COMPA
TOOLTEST $FILE4 -l COMPA
################################################################
# layout conversions (file has no filters)
###############################################################
TOOLTEST $FILE4 -l dset_compact:CONTI
TOOLTEST $FILE4 -l dset_compact:CHUNK=2x5
TOOLTEST $FILE4 -l dset_compact:COMPA
TOOLTEST $FILE4 -l dset_contiguous:COMPA
TOOLTEST $FILE4 -l dset_contiguous:CHUNK=3x6
TOOLTEST $FILE4 -l dset_contiguous:CONTI
TOOLTEST $FILE4 -l dset_chunk:COMPA
TOOLTEST $FILE4 -l dset_chunk:CONTI
TOOLTEST $FILE4 -l dset_chunk:CHUNK=18x13
# Native option
# Do not use FILE1, as the named dtype will be converted to native, and h5diff will
# report a difference.
TOOLTEST $FILE0 -n
TOOLTEST $FILE2 -n
# latest file format with long switches. use FILE4=h5repack_layout.h5 (no filters)
arg="$FILE4 --layout CHUNK=20x10 --filter GZIP=1 --minimum=10 --native --latest --compact=8 --indexed=6 --ssize=8[:dtype]"
if test $USE_FILTER_DEFLATE != "yes" ; then
SKIP $arg
else
TOOLTEST $arg
fi
# latest file format with short switches. use FILE4=h5repack_layout.h5 (no filters)
arg="$FILE4 -l CHUNK=20x10 -f GZIP=1 -m 10 -n -L -c 8 -d 6 -s 8[:dtype]"
if test $USE_FILTER_DEFLATE != "yes" ; then
SKIP $arg
else
TOOLTEST $arg
fi
# several global filters
arg="$FILE4 --filter GZIP=1 --filter SHUF"
if test $USE_FILTER_DEFLATE != "yes" -o $USE_FILTER_SHUFFLE != "yes" ; then
SKIP $arg
else
TOOLTEST $arg
fi
# syntax of -i infile -o outfile
# latest file format with short switches. use FILE4=h5repack_layout.h5 (no filters)
arg="$FILE4 -l CHUNK=20x10 -f GZIP=1 -m 10 -n -L -c 8 -d 6 -s 8[:dtype]"
if test $USE_FILTER_DEFLATE != "yes" ; then
SKIP $arg
else
TOOLTEST0 $arg
fi
# add a userblock to file
arg="$FILE1 -u ublock.bin -b 2048"
TOOLTEST $arg
# add alignment
arg="$FILE1 -t 1 -a 1 "
TOOLTEST $arg
# Check repacking file with old version of layout message (should get upgraded
# to new version and be readable, etc.)
TOOLTEST $FILE14
# test for datum size > H5TOOLS_MALLOCSIZE
TOOLTEST $FILE1 -f GZIP=1
# Check repacking file with committed datatypes in odd configurations
TOOLTEST $FILE15
# tests family driver (file is located in common testfiles folder, uses TOOLTEST1
TOOLTEST1 $FILE16
if test $nerrors -eq 0 ; then
echo "All $TESTNAME tests passed."
exit $EXIT_SUCCESS
else
echo "$TESTNAME tests failed with $nerrors errors."
exit $EXIT_FAILURE
fi
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