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https://github.com/HDFGroup/hdf5.git
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edbd77302f
enhanced performance for h5diff Description: the comparison cycle for the 2 buffers read from file was using a compare function where the type must be checked for each datum (e.g due to recursive calls in compound types) for atomic types this checking can be avoided Solution: introduced cycles for each one of the atomic integer and float class types Platforms tested: linux aix solaris Misc. update:
378 lines
13 KiB
C
378 lines
13 KiB
C
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
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* Copyright by the Board of Trustees of the University of Illinois. *
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* All rights reserved. *
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* *
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* This file is part of HDF5. The full HDF5 copyright notice, including *
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* terms governing use, modification, and redistribution, is contained in *
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* the files COPYING and Copyright.html. COPYING can be found at the root *
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* of the source code distribution tree; Copyright.html can be found at the *
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* root level of an installed copy of the electronic HDF5 document set and *
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* is linked from the top-level documents page. It can also be found at *
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* http://hdf.ncsa.uiuc.edu/HDF5/doc/Copyright.html. If you do not have *
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* access to either file, you may request a copy from hdfhelp@ncsa.uiuc.edu. *
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* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
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#ifndef H5DIFF_H__
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#define H5DIFF_H__
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#include "hdf5.h"
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#include "h5trav.h"
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#if 0
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#define H5DIFF_DEBUG
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#endif
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/*-------------------------------------------------------------------------
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* printf formatting
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*-------------------------------------------------------------------------
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*/
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#define FFORMAT "%-15f %-15f %-15f\n"
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#define IFORMAT "%-15d %-15d %-15d\n"
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#define CFORMAT "%-16c %-17c\n"
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#define SFORMAT "%-16s %-17s\n"
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#define UIFORMAT "%-15u %-15u %-15u\n"
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#define LIFORMAT "%-15ld %-15ld %-15ld\n"
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#define ULIFORMAT "%-15lu %-15lu %-15lu\n"
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/* with -p option */
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#define FPFORMAT "%-15.10g %-15.10g %-15.10g %-14.10g\n"
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#define IPFORMAT "%-15d %-15d %-15d %-14d\n"
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#define UIPFORMAT "%-15u %-15u %-15u %-14u\n"
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#define LPIFORMAT "%-15ld %-15ld %-15ld %-14ld\n"
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#define ULPIFORMAT "%-15lu %-15lu %-15lu %-14lu\n"
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#define SPACES " "
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/*-------------------------------------------------------------------------
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* command line options
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*-------------------------------------------------------------------------
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*/
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typedef struct {
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int m_quiet; /* quiet mide: no output at all */
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int m_report; /* report mode: print the data */
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int m_verbose; /* verbose mode: print the data, list of objcets, warnings */
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int d; /* delta, absolute value to compare */
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double delta; /* delta value */
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int p; /* relative error to compare*/
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double percent; /* relative error value */
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int n; /* count, compare up to count */
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int count; /* count value */
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int err_stat; /* an error ocurred (1, error, 0, no error) */
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int cmn_objs; /* do we have comparable objects */
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} diff_opt_t;
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/*-------------------------------------------------------------------------
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* public functions
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*-------------------------------------------------------------------------
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*/
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#ifdef __cplusplus
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extern "C" {
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#endif
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hsize_t h5diff(const char *fname1,
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const char *fname2,
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const char *objname1,
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const char *objname2,
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diff_opt_t *options);
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#ifdef __cplusplus
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}
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#endif
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/*-------------------------------------------------------------------------
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* private functions
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*-------------------------------------------------------------------------
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*/
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hsize_t diff_dataset( hid_t file1_id,
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hid_t file2_id,
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const char *obj1_name,
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const char *obj2_name,
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diff_opt_t *options );
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hsize_t diff_datasetid( hid_t dset1_id,
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hid_t dset2_id,
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const char *obj1_name,
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const char *obj2_name,
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diff_opt_t *options );
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hsize_t diff( hid_t file1_id,
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const char *path1,
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hid_t file2_id,
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const char *path2,
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diff_opt_t *options,
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H5G_obj_t type );
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hsize_t diff_compare( hid_t file1_id,
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const char *file1_name,
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const char *obj1_name,
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int nobjects1,
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trav_info_t *info1,
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hid_t file2_id,
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const char *file2_name,
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const char *obj2_name,
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int nobjects2,
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trav_info_t *info2,
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diff_opt_t *options );
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hsize_t diff_match( hid_t file1_id,
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int nobjects1,
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trav_info_t *info1,
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hid_t file2_id,
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int nobjects2,
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trav_info_t *info2,
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diff_opt_t *options );
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hsize_t diff_array( void *_mem1,
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void *_mem2,
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hsize_t nelmts,
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int rank,
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hsize_t *dims,
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diff_opt_t *options,
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const char *name1,
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const char *name2,
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hid_t m_type,
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hid_t container1_id,
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hid_t container2_id); /* dataset where the reference came from*/
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int diff_can_type( hid_t f_type1, /* file data type */
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hid_t f_type2, /* file data type */
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int rank1,
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int rank2,
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hsize_t *dims1,
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hsize_t *dims2,
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hsize_t *maxdim1,
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hsize_t *maxdim2,
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const char *obj1_name,
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const char *obj2_name,
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diff_opt_t *options );
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int diff_attr(hid_t loc1_id,
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hid_t loc2_id,
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const char *path1,
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const char *path2,
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diff_opt_t *options
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);
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/*-------------------------------------------------------------------------
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* utility functions
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*-------------------------------------------------------------------------
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*/
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void print_found(hsize_t nfound);
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void print_type(hid_t type);
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const char* diff_basename(const char *name);
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const char* get_type(int type);
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const char* get_class(H5T_class_t tclass);
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const char* get_sign(H5T_sign_t sign);
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void print_dims( int r, hsize_t *d );
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void print_pos( int *ph,
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int per,
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hsize_t curr_pos,
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hsize_t *acc,
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hsize_t *pos,
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int rank,
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const char *obj1,
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const char *obj2 );
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int print_objname(diff_opt_t *options, hsize_t nfound);
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#if defined (H5DIFF_DEBUG)
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void print_sizes( const char *obj1, const char *obj2,
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hid_t f_type1, hid_t f_type2,
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hid_t m_type1, hid_t m_type2 );
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#endif
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hsize_t diff_native_uchar(unsigned char *mem1,
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unsigned char *mem2,
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hsize_t i,
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int rank,
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hsize_t *acc,
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hsize_t *pos,
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diff_opt_t *options,
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const char *obj1,
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const char *obj2,
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int *ph);
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hsize_t diff_char(unsigned char *mem1,
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unsigned char *mem2,
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hsize_t i,
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int rank,
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hsize_t *acc,
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hsize_t *pos,
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diff_opt_t *options,
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const char *obj1,
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const char *obj2,
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int *ph);
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hsize_t diff_datum(void *_mem1,
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void *_mem2,
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hid_t m_type,
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hsize_t i,
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int rank,
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hsize_t *acc,
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hsize_t *pos,
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diff_opt_t *options,
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const char *obj1,
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const char *obj2,
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hid_t container1_id,
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hid_t container2_id, /*where the reference came from*/
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int *ph); /*print header */
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hsize_t diff_float(unsigned char *mem1,
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unsigned char *mem2,
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hsize_t nelmts,
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int rank,
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hsize_t *acc,
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hsize_t *pos,
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diff_opt_t *options,
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const char *obj1,
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const char *obj2,
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int *ph);
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hsize_t diff_double(unsigned char *mem1,
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unsigned char *mem2,
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hsize_t nelmts,
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int rank,
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hsize_t *acc,
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hsize_t *pos,
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diff_opt_t *options,
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const char *obj1,
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const char *obj2,
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int *ph);
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hsize_t diff_schar(unsigned char *mem1,
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unsigned char *mem2,
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hsize_t nelmts,
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int rank,
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hsize_t *acc,
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hsize_t *pos,
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diff_opt_t *options,
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const char *obj1,
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const char *obj2,
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int *ph);
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hsize_t diff_uchar(unsigned char *mem1,
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unsigned char *mem2,
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hsize_t nelmts,
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int rank,
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hsize_t *acc,
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hsize_t *pos,
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diff_opt_t *options,
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const char *obj1,
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const char *obj2,
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int *ph);
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hsize_t diff_short(unsigned char *mem1,
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unsigned char *mem2,
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hsize_t nelmts,
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int rank,
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hsize_t *acc,
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hsize_t *pos,
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diff_opt_t *options,
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const char *obj1,
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const char *obj2,
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int *ph);
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hsize_t diff_ushort(unsigned char *mem1,
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unsigned char *mem2,
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hsize_t nelmts,
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int rank,
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hsize_t *acc,
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hsize_t *pos,
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diff_opt_t *options,
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const char *obj1,
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const char *obj2,
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int *ph);
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hsize_t diff_int(unsigned char *mem1,
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unsigned char *mem2,
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hsize_t nelmts,
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int rank,
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hsize_t *acc,
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hsize_t *pos,
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diff_opt_t *options,
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const char *obj1,
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const char *obj2,
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int *ph);
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hsize_t diff_uint(unsigned char *mem1,
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unsigned char *mem2,
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hsize_t nelmts,
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int rank,
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hsize_t *acc,
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hsize_t *pos,
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diff_opt_t *options,
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const char *obj1,
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const char *obj2,
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int *ph);
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hsize_t diff_long(unsigned char *mem1,
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unsigned char *mem2,
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hsize_t nelmts,
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int rank,
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hsize_t *acc,
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hsize_t *pos,
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diff_opt_t *options,
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const char *obj1,
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const char *obj2,
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int *ph);
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hsize_t diff_ulong(unsigned char *mem1,
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unsigned char *mem2,
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hsize_t nelmts,
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int rank,
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hsize_t *acc,
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hsize_t *pos,
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diff_opt_t *options,
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const char *obj1,
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const char *obj2,
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int *ph);
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hsize_t diff_llong(unsigned char *mem1,
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unsigned char *mem2,
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hsize_t nelmts,
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int rank,
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hsize_t *acc,
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hsize_t *pos,
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diff_opt_t *options,
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const char *obj1,
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const char *obj2,
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int *ph);
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hsize_t diff_ullong(unsigned char *mem1,
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unsigned char *mem2,
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hsize_t nelmts,
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int rank,
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hsize_t *acc,
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hsize_t *pos,
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diff_opt_t *options,
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const char *obj1,
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const char *obj2,
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int *ph);
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#endif /* H5DIFF_H__ */
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