mirror of
https://github.com/HDFGroup/hdf5.git
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e06bf9d263
Description:
- Added functions to query chunk information:
H5Dget_num_chunks(dset_id, fspace_id, *nchunks)
Gets the number of written chunks that intersect with the given
dataspace. However, in this version, the intersection is not
yet completed. Thus, the number of all written chunks will be
returned.
H5Dget_chunk_info_by_coord(dset_id, *offset, *filter_mask, *addr, *size)
Given a chunk's logical coordinates, returns the chunk's filter,
address, and size.
H5Dget_chunk_info(dset_id, fspace_id, index, *offset, *filter_mask, *addr, *size)
Given a chunk's index, returns the chunk's logical coordinates, filter,
address, and size. The chunk belongs to a set of chunks that have
nonempty intersection with the specified dataspace. However, in
this version, the intersection is not yet completed, and the index
is of all the written chunks.
These functions comply with VOL.
- Fixed some oversights found in the library for the tests in chunk_info.c
to work correctly. The returned value from a callback function was not
checked in H5EA_iterate(), H5FA_iterate(), and H5D__none_idx_iterate().
This oversight caused a callback function to continue iterating even though
it's supposed to stop.
Platforms tested:
Linux/64 (jelly)
Linux/64 (platypus)
Darwin (osx1011test)
235 lines
12 KiB
Makefile
235 lines
12 KiB
Makefile
#
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# Copyright by The HDF Group.
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# Copyright by the Board of Trustees of the University of Illinois.
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# All rights reserved.
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#
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# This file is part of HDF5. The full HDF5 copyright notice, including
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# terms governing use, modification, and redistribution, is contained in
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# the COPYING file, which can be found at the root of the source code
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# distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases.
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# If you do not have access to either file, you may request a copy from
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# help@hdfgroup.org.
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##
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## Makefile.am
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## Run automake to generate a Makefile.in from this file.
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##
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#
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# HDF5 Library Test Makefile(.in)
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#
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include $(top_srcdir)/config/commence.am
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AM_CPPFLAGS+=-I$(top_srcdir)/src -I$(top_builddir)/src
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# Test scripts--
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# testerror.sh: err_compat, error_test
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# testlibinfo.sh:
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# testcheck_version.sh: tcheck_version
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# testlinks_env.sh: links_env
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# testexternal_env.sh: external_env
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# testflushrefresh.sh: flushrefresh
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# testvds_env.sh: vds_env
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# testswmr.sh: swmr*
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# testvdsswmr.sh: vds_swmr*
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# testabort_fail.sh: filenotclosed.c and del_many_dense_attrs.c
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# test_filter_plugin.sh: filter_plugin.c
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# test_usecases.sh: use_append_chunk, use_append_mchunks, use_disable_mdc_flushes
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TEST_SCRIPT = testerror.sh testlibinfo.sh testcheck_version.sh testlinks_env.sh testexternal_env.sh \
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testswmr.sh testvds_env.sh testvdsswmr.sh testflushrefresh.sh test_usecases.sh testabort_fail.sh
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SCRIPT_DEPEND = error_test$(EXEEXT) err_compat$(EXEEXT) links_env$(EXEEXT) \
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external_env$(EXEEXT) filenotclosed$(EXEEXT) del_many_dense_attrs$(EXEEXT) \
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flushrefresh$(EXEEXT) use_append_chunk$(EXEEXT) use_append_mchunks$(EXEEXT) use_disable_mdc_flushes$(EXEEXT) \
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swmr_generator$(EXEEXT) swmr_reader$(EXEEXT) swmr_writer$(EXEEXT) \
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swmr_remove_reader$(EXEEXT) swmr_remove_writer$(EXEEXT) swmr_addrem_writer$(EXEEXT) \
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swmr_sparse_reader$(EXEEXT) swmr_sparse_writer$(EXEEXT) swmr_start_write$(EXEEXT) \
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vds_env$(EXEEXT) vds_swmr_gen$(EXEEXT) vds_swmr_reader$(EXEEXT) vds_swmr_writer$(EXEEXT)
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if HAVE_SHARED_CONDITIONAL
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TEST_SCRIPT += test_filter_plugin.sh test_vol_plugin.sh
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SCRIPT_DEPEND += filter_plugin$(EXEEXT) vol_plugin$(EXEEXT)
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endif
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check_SCRIPTS = $(TEST_SCRIPT)
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# These are our main targets. They should be listed in the order to be
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# executed, generally most specific tests to least specific tests.
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# As an exception, long-running tests should occur earlier in the list.
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# This gives them more time to run when tests are executing in parallel.
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TEST_PROG= testhdf5 \
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cache cache_api cache_image cache_tagging lheap ohdr \
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stab gheap evict_on_close farray earray btree2 fheap \
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pool accum hyperslab istore bittests dt_arith page_buffer \
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dtypes dsets chunk_info cmpd_dset filter_fail extend direct_chunk \
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external efc objcopy links unlink twriteorder big mtime fillval mount \
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flush1 flush2 app_ref enum set_extent ttsafe enc_dec_plist \
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enc_dec_plist_cross_platform getname vfd ros3 s3comms hdfs ntypes \
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dangle dtransform reserved cross_read freespace mf vds file_image \
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unregister cache_logging cork swmr vol
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# List programs to be built when testing here.
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# error_test and err_compat are built at the same time as the other tests, but executed by testerror.sh.
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# tcheck_version is used by testcheck_version.sh.
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# accum_swmr_reader is used by accum.c.
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# atomic_writer and atomic_reader are standalone programs.
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# links_env is used by testlinks_env.sh
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# external_env is used by testexternal_env.sh
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# filenotclosed and del_many_dense_attrs are used by testabort_fail.sh
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# flushrefresh is used by testflushrefresh.sh.
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# use_append_chunk, use_append_mchunks and use_disable_mdc_flushes are used by test_usecases.sh
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# swmr_* files (besides swmr.c) are used by testswmr.sh.
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# vds_swmr_* files are used by testvdsswmr.sh
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# vds_env is used by testvds_env.sh
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# 'make check' doesn't run them directly, so they are not included in TEST_PROG.
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# Also build testmeta, which is used for timings test. It builds quickly,
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# and this lets automake keep all its test programs in one place.
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check_PROGRAMS=$(TEST_PROG) error_test err_compat tcheck_version \
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testmeta accum_swmr_reader atomic_writer atomic_reader external_env \
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links_env filenotclosed del_many_dense_attrs flushrefresh \
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use_append_chunk use_append_mchunks use_disable_mdc_flushes \
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swmr_generator swmr_start_write swmr_reader swmr_writer swmr_remove_reader \
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swmr_remove_writer swmr_addrem_writer swmr_sparse_reader swmr_sparse_writer \
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swmr_check_compat_vfd vds_env vds_swmr_gen vds_swmr_reader vds_swmr_writer
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if HAVE_SHARED_CONDITIONAL
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check_PROGRAMS+= filter_plugin vol_plugin
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endif
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# These programs generate test files for the tests. They don't need to be
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# compiled every time we want to test the library. However, putting
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# them in a conditional causes automake to generate rules so that they
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# can be built by hand. They can also be built by specifying
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# --enable-build-all at configure time.
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# The gen_old_* files can only be compiled with older versions of the library
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# so do not appear in this list.
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BUILD_ALL_PROGS=gen_bad_ohdr gen_bogus gen_cross gen_deflate gen_filters gen_new_array \
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gen_new_fill gen_new_group gen_new_mtime gen_new_super gen_noencoder \
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gen_nullspace gen_udlinks space_overflow gen_filespace gen_specmetaread \
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gen_sizes_lheap gen_file_image gen_plist gen_bad_offset gen_bounds
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if BUILD_ALL_CONDITIONAL
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noinst_PROGRAMS=$(BUILD_ALL_PROGS)
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endif
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if HAVE_SHARED_CONDITIONAL
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# The libh5test library provides common support code for the tests.
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# The filter_plugin* libraries are for use in filter_plugin.c.
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# Build them as shared libraries if that option was enabled in configure.
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noinst_LTLIBRARIES=libh5test.la libfilter_plugin1_dsets.la libfilter_plugin2_dsets.la libfilter_plugin3_dsets.la libfilter_plugin4_groups.la libnull_vol_connector.la
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libfilter_plugin1_dsets_la_SOURCES=filter_plugin1_dsets.c
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libfilter_plugin2_dsets_la_SOURCES=filter_plugin2_dsets.c
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libfilter_plugin3_dsets_la_SOURCES=filter_plugin3_dsets.c
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libfilter_plugin4_groups_la_SOURCES=filter_plugin4_groups.c
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libfilter_plugin1_dsets_la_LDFLAGS=$(AM_LDFLAGS) -avoid-version -module -shared -export-dynamic -rpath /nowhere
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libfilter_plugin2_dsets_la_LDFLAGS=$(AM_LDFLAGS) -avoid-version -module -shared -export-dynamic -rpath /nowhere
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libfilter_plugin3_dsets_la_LDFLAGS=$(AM_LDFLAGS) -avoid-version -module -shared -export-dynamic -rpath /nowhere
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libfilter_plugin4_groups_la_LDFLAGS=$(AM_LDFLAGS) -avoid-version -module -shared -export-dynamic -rpath /nowhere
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libfilter_plugin3_dsets_la_LIBADD=$(LIBHDF5)
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libfilter_plugin4_groups_la_LIBADD=$(LIBHDF5)
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# VOL plugin test libraries
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#
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# null_vol_connector is used for testing basic VOL plugin functionality.
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libnull_vol_connector_la_SOURCES=null_vol_connector.c
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libnull_vol_connector_la_LDFLAGS=$(AM_LDFLAGS) -avoid-version -module -shared -export-dynamic -rpath /nowhere
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else
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# The libh5test library provides common support code for the tests.
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noinst_LTLIBRARIES=libh5test.la
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endif
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libh5test_la_SOURCES=h5test.c testframe.c cache_common.c swmr_common.c external_common.c
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# Use libhd5test.la to compile all of the tests
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LDADD=libh5test.la $(LIBHDF5)
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# List the source files for tests that have more than one
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ttsafe_SOURCES=ttsafe.c ttsafe_dcreate.c ttsafe_error.c ttsafe_cancel.c \
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ttsafe_acreate.c
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cache_image_SOURCES=cache_image.c genall5.c
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VFD_LIST = sec2 stdio core core_paged split multi family
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if DIRECT_VFD_CONDITIONAL
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VFD_LIST += direct
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endif
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# Test with just the native connector, with a single pass-through connector
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# and with a doubly-stacked pass-through.
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VOL_LIST = native "pass_through under_vol=0;under_info={}" \
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"pass_through under_vol=505;under_info={under_vol=0;under_info={}}"
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# Additional target for running timing test
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timings _timings: testmeta
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@for timing in $(TIMINGS) dummy; do \
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if test $$timing != dummy; then \
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echo "Running $$timing $(TEST_FLAGS)"; \
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$(RUNEXEC) ./$$timing $(TEST_FLAGS) || exit 1; \
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fi; \
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done;
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# The flush1 test must run before the flush2 test
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flush2.chkexe_: flush1.chkexe_
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# Temporary files. These files are the ones created by setting the
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# HDF5_NOCLEANUP environment variable and running `make test' without
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# specifying a file prefix or low-level driver. Changing the file
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# prefix or low-level driver with environment variables will influence
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# the temporary file name in ways that the makefile is not aware of.
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CHECK_CLEANFILES+=accum.h5 cmpd_dset.h5 compact_dataset.h5 dataset.h5 dset_offset.h5 \
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max_compact_dataset.h5 simple.h5 set_local.h5 random_chunks.h5 \
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huge_chunks.h5 chunk_cache.h5 big_chunk.h5 chunk_fast.h5 chunk_expand.h5 \
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chunk_fixed.h5 copy_dcpl_newfile.h5 partial_chunks.h5 layout_extend.h5 \
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zero_chunk.h5 chunk_single.h5 swmr_non_latest.h5 \
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earray_hdr_fd.h5 farray_hdr_fd.h5 bt2_hdr_fd.h5 \
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storage_size.h5 dls_01_strings.h5 \
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extend.h5 istore.h5 extlinks*.h5 frspace.h5 links*.h5 \
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sys_file1 tfile[1-7].h5 th5s[1-4].h5 lheap.h5 fheap.h5 ohdr.h5 \
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stab.h5 extern_[1-5].h5 extern_[1-4][rw].raw gheap[0-4].h5 \
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ohdr_min_a.h5 ohdr_min_b.h5 min_dset_ohdr_testfile.h5\
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dt_arith[1-2] links.h5 links[0-6]*.h5 extlinks[0-15].h5 \
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tmp tmp_links tmp2_links tmp_links_env tmp_vds_env \
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big.data big[0-9][0-9][0-9][0-9][0-9].h5 \
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stdio.h5 sec2.h5 dtypes[0-9].h5 dtypes1[0].h5 dt_arith[1-2].h5 tattr.h5 \
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tselect.h5 mtime.h5 unlink.h5 unicode.h5 coord.h5 \
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fillval_[0-9].h5 fillval.raw mount_[0-9].h5 testmeta.h5 ttime.h5 \
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trefer[1-3].h5 tvltypes.h5 tvlstr.h5 tvlstr2.h5 twriteorder.dat \
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flush.h5 flush-swmr.h5 noflush.h5 noflush-swmr.h5 flush_extend.h5 \
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flush_extend-swmr.h5 noflush_extend.h5 noflush_extend-swmr.h5 \
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enum1.h5 titerate.h5 ttsafe.h5 tarray1.h5 tgenprop.h5 \
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tmisc[0-9]*.h5 set_extent[1-5].h5 ext[12].bin \
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getname.h5 getname[1-3].h5 sec2_file.h5 direct_file.h5 \
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family_file000[0-3][0-9].h5 new_family_v16_000[0-3][0-9].h5 \
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multi_file-[rs].h5 core_file filter_plugin.h5 \
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new_move_[ab].h5 ntypes.h5 dangle.h5 error_test.h5 err_compat.h5 \
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dtransform.h5 test_filters.h5 get_file_name.h5 tstint[1-2].h5 \
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unlink_chunked.h5 btree2.h5 btree2_tmp.h5 objcopy_src.h5 objcopy_dst.h5 \
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objcopy_ext.dat trefer1.h5 trefer2.h5 app_ref.h5 farray.h5 farray_tmp.h5 \
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earray.h5 earray_tmp.h5 efc[0-5].h5 log_vfd_out.log log_ros3_out.log \
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log_s3comms_out.log new_multi_file_v16-r.h5 new_multi_file_v16-s.h5 \
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split_get_file_image_test-m.h5 split_get_file_image_test-r.h5 \
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file_image_core_test.h5.copy unregister_filter_1.h5 unregister_filter_2.h5 \
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vds_virt.h5 vds_dapl.h5 vds_src_[0-1].h5 \
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swmr_data.h5 use_use_append_chunk.h5 use_append_mchunks.h5 use_disable_mdc_flushes.h5 \
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flushrefresh.h5 flushrefresh_VERIFICATION_START \
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flushrefresh_VERIFICATION_CHECKPOINT1 flushrefresh_VERIFICATION_CHECKPOINT2 \
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flushrefresh_VERIFICATION_DONE atomic_data accum_swmr_big.h5 ohdr_swmr.h5 \
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test_swmr*.h5 cache_logging.h5 cache_logging.out vds_swmr.h5 vds_swmr_src_*.h5 \
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swmr[0-2].h5 swmr_writer.out swmr_writer.log.* swmr_reader.out.* swmr_reader.log.* \
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tbogus.h5.copy cache_image_test.h5 direct_chunk.h5 native_vol_test.h5
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# Sources for testhdf5 executable
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testhdf5_SOURCES=testhdf5.c tarray.c tattr.c tchecksum.c tconfig.c tfile.c \
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tgenprop.c th5o.c th5s.c tcoords.c theap.c tid.c titerate.c tmeta.c tmisc.c \
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trefer.c trefstr.c tselect.c tskiplist.c tsohm.c ttime.c ttst.c tunicode.c \
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tvlstr.c tvltypes.c
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# Sources for Use Cases
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use_append_chunk_SOURCES=use_append_chunk.c use_common.c
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use_append_mchunks_SOURCES=use_append_mchunks.c use_common.c
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use_disable_mdc_flushes_SOURCES=use_disable_mdc_flushes.c
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# Temporary files.
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DISTCLEANFILES=testerror.sh testlibinfo.sh testcheck_version.sh testlinks_env.sh test_filter_plugin.sh \
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testexternal_env.sh testswmr.sh testvds_env.sh testvdsswmr.sh test_usecases.sh testflushrefresh.sh testabort_fail.sh \
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test_vol_plugin.sh
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include $(top_srcdir)/config/conclude.am
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