Neil Fortner 692fa69934 [svn-r23237] Purpose: Implement H5Dscatter and H5Dgather ...

Description:
Adds 2 new API functions, H5Dscatter and H5Dgather.  H5Dscatter retrieves data
from a specified callback function and scatters it into a selection, defined by
a supplied dataspace, within a supplied memory buffer.  H5Dgather gathers data
from a selection within a supplied memory buffer and passes it in a contiguous
form to a supplied callback function.  Added tests for these functions

Tested: jam, ostrich, koala (h5committest); ummon

2013-02-08 11:49:21 -05:00

..

testfiles

[svn-r23017] I added a prototype function H5DOwrite_chunk in HL library for Dectris people to test performance. The library's API function H5PSIdirect_write

2012-11-07 12:08:46 -05:00

accum.c

[svn-r23219] Description:

2013-02-01 20:53:32 -05:00

app_ref.c

[svn-r17838] Description:

2009-11-05 08:45:35 -05:00

bad_compound.h5

[svn-r20513] Description:

2011-04-15 14:06:38 -05:00

be_data.h5

[svn-r20855] Issue 2599 - Cross-test BE and LE data. I added the test for deflate, szip, fletcher32, shuffle and nbit filter in cross_read.c and gen_cross.c. I also took out the data file for OpenVMS because the data isn't native but IEEE for floating-numbers.

2011-05-17 17:18:05 -05:00

be_extlink1.h5

…

be_extlink2.h5

…

big.c

[svn-r22024] Add HD prefix to tools library based tests. Cleaned allocation/free in tests.

2012-03-05 09:17:14 -05:00

bittests.c

[svn-r22287] Description:

2012-04-16 16:20:26 -05:00

btree2.c

[svn-r20529] Purpose: Add testing for bug 1864

2011-04-15 17:05:23 -05:00

cache_api.c

[svn-r19096] Description:

2010-07-19 05:54:51 -05:00

cache_common.c

[svn-r22646] Description:

2012-08-08 18:01:20 -05:00

cache_common.h

[svn-r19096] Description:

2010-07-19 05:54:51 -05:00

cache_tagging.c

[svn-r22676] Changes needed to make the default free-list mapping from H5FD_FLMAP_SINGLE to H5FD_FLMAP_DICHOTOMY.

2012-08-13 15:04:20 -05:00

cache.c

[svn-r22646] Description:

2012-08-08 18:01:20 -05:00

chunk_info.c

…

CMakeLists.txt

[svn-r23161] ported revisions 23146:23160 from the trunk

2013-01-14 14:45:59 -05:00

cmpd_dset.c

[svn-r22287] Description:

2012-04-16 16:20:26 -05:00

COPYING

[svn-r22110] Removed incorrect 'executable' svn properties.

2012-03-21 14:50:28 -05:00

corrupt_stab_msg.h5

[svn-r22110] Removed incorrect 'executable' svn properties.

2012-03-21 14:50:28 -05:00

cross_read.c

[svn-r22110] Removed incorrect 'executable' svn properties.

2012-03-21 14:50:28 -05:00

dangle.c

[svn-r19697] Description:

2010-10-29 10:31:57 -05:00

deflate.h5

…

dsets.c

[svn-r23237] Purpose: Implement H5Dscatter and H5Dgather

2013-02-08 11:49:21 -05:00

dt_arith.c

[svn-r22646] Description:

2012-08-08 18:01:20 -05:00

dtransform.c

[svn-r22076] #Issue 7922 - H5Pset_data_transform had seg fault with some operations like x*-100.

2012-03-15 15:53:14 -05:00

dtypes.c

[svn-r22646] Description:

2012-08-08 18:01:20 -05:00

earray.c

[svn-r20529] Purpose: Add testing for bug 1864

2011-04-15 17:05:23 -05:00

efc.c

[svn-r20529] Purpose: Add testing for bug 1864

2011-04-15 17:05:23 -05:00

enc_dec_plist_with_endianess.c

[svn-r22987] ported revisions from 22742 to 22986 from the trunk

2012-10-29 13:59:05 -05:00

enc_dec_plist.c

[svn-r22987] ported revisions from 22742 to 22986 from the trunk

2012-10-29 13:59:05 -05:00

enum.c

[svn-r22987] ported revisions from 22742 to 22986 from the trunk

2012-10-29 13:59:05 -05:00

err_compat.c

[svn-r19578] Bug fix for 1707 - H5Eset_auto causes a seg fault when an application uses -DH5_USE_16_API

2010-10-11 17:15:54 -05:00

error_test.c

[svn-r20971] Issue 4278 - When reading data fails, the error message should say which filter isn't registered. This is the follow-up commit. The previous way to construct the name of the existent data file wasn't very safe. It could be cleaned up if any user builds the library in the source directory.

2011-06-13 16:28:49 -05:00

extend.c

[svn-r20529] Purpose: Add testing for bug 1864

2011-04-15 17:05:23 -05:00

external.c

[svn-r22287] Description:

2012-04-16 16:20:26 -05:00

family_v16_00000.h5

[svn-r16759] The test of family file compatibility with v1.6 used the original family files under the

2009-04-15 16:42:02 -05:00

family_v16_00001.h5

…

family_v16_00002.h5

…

family_v16_00003.h5

…

farray.c

[svn-r20529] Purpose: Add testing for bug 1864

2011-04-15 17:05:23 -05:00

fheap.c

[svn-r22233] Description:

2012-04-01 18:53:17 -05:00

file_image_core_test.h5

[svn-r22219] Description:

2012-03-31 03:49:35 -05:00

file_image.c

[svn-r22987] ported revisions from 22742 to 22986 from the trunk

2012-10-29 13:59:05 -05:00

filespace_1_6.h5

[svn-r17582] Description:

2009-10-01 21:08:59 -05:00

filespace_1_8.h5

[svn-r17582] Description:

2009-10-01 21:08:59 -05:00

fill_old.h5

…

fillval.c

[svn-r20529] Purpose: Add testing for bug 1864

2011-04-15 17:05:23 -05:00

filter_error.h5

[svn-r20930] Issue 4278 - When reading data fails, the error message should say which filter isn't registered. This is the follow-up commit. When I checked in the fix and test (revision 20929), I forgot to add the data file test/filter_error.h5.

2011-06-03 14:59:34 -05:00

filter_fail.c

[svn-r20529] Purpose: Add testing for bug 1864

2011-04-15 17:05:23 -05:00

flush1.c

…

flush2.c

[svn-r21366] JIRA HDFFV-2748 replace use of _WIN32 in source. Created new defines H5_HAVE_WIN32_API and H5_HAVE_VISUAL_STUDIO defines to use. These can be properly set during configurration.

2011-09-06 11:50:32 -05:00

freespace.c

[svn-r22646] Description:

2012-08-08 18:01:20 -05:00

gen_bad_compound.c

[svn-r20513] Description:

2011-04-15 14:06:38 -05:00

gen_bad_ohdr.c

[svn-r18031] Description:

2009-12-17 17:21:08 -05:00

gen_bogus.c

[svn-r18031] Description:

2009-12-17 17:21:08 -05:00

gen_cross.c

[svn-r22110] Removed incorrect 'executable' svn properties.

2012-03-21 14:50:28 -05:00

gen_deflate.c

[svn-r18030] Description:

2009-12-17 10:07:35 -05:00

gen_file_image.c

[svn-r22219] Description:

2012-03-31 03:49:35 -05:00

gen_filespace.c

[svn-r20480] Description:

2011-04-12 11:59:33 -05:00

gen_filters.c

[svn-r20929] Issue 4278 - When reading data fails, the error message should say which filter isn't registered. The fix is simple. Most of the effort is on the test. The file with filter enabled is created in gen_filter.c. The verification of the error message is in test_error.c. The output is compared against the standard output.

2011-06-03 10:58:49 -05:00

gen_mergemsg.c

…

gen_new_array.c

…

gen_new_fill.c

…

gen_new_group.c

…

gen_new_mtime.c

…

gen_new_super.c

…

gen_noencoder.c

[svn-r18030] Description:

2009-12-17 10:07:35 -05:00

gen_nullspace.c

…

gen_old_array.c

…

gen_old_group.c

…

gen_old_layout.c

…

gen_old_mtime.c

…

gen_plist.c

[svn-r22987] ported revisions from 22742 to 22986 from the trunk

2012-10-29 13:59:05 -05:00

gen_sizes_lheap.c

[svn-r19076] Purpose: Fix bug 1951

2010-07-16 11:32:49 -05:00

gen_specmetaread.c

[svn-r17624] Description:

2009-10-08 23:09:34 -05:00

gen_udlinks.c

…

getname.c

[svn-r21923] Description:

2012-02-09 21:16:52 -05:00

gheap.c

[svn-r20529] Purpose: Add testing for bug 1864

2011-04-15 17:05:23 -05:00

group_old.h5

…

h5test.c

[svn-r22987] ported revisions from 22742 to 22986 from the trunk

2012-10-29 13:59:05 -05:00

h5test.h

[svn-r22987] ported revisions from 22742 to 22986 from the trunk

2012-10-29 13:59:05 -05:00

H5srcdir_str.h.in

[svn-r18419] Description:

2010-03-18 07:23:04 -05:00

H5srcdir.h

[svn-r20315] brought revisions 19868:20300 from the 1.8.6_vms branch to the trunk for VMS work

2011-03-24 13:33:45 -05:00

hyperslab.c

[svn-r19272] Description:

2010-08-20 16:37:12 -05:00

istore.c

[svn-r22161] Added a message when the time-consuming test is skipped due to a lack of sparse file support.

2012-03-27 16:49:08 -05:00

le_data.h5

[svn-r20855] Issue 2599 - Cross-test BE and LE data. I added the test for deflate, szip, fletcher32, shuffle and nbit filter in cross_read.c and gen_cross.c. I also took out the data file for OpenVMS because the data isn't native but IEEE for floating-numbers.

2011-05-17 17:18:05 -05:00

le_extlink1.h5

…

le_extlink2.h5

…

lheap.c

[svn-r20529] Purpose: Add testing for bug 1864

2011-04-15 17:05:23 -05:00

links_env.c

[svn-r20529] Purpose: Add testing for bug 1864

2011-04-15 17:05:23 -05:00

links.c

[svn-r22987] ported revisions from 22742 to 22986 from the trunk

2012-10-29 13:59:05 -05:00

Makefile.am

[svn-r23152] I took out the obsolete function H5PSIwrite_chunk and its related test and performance test.

2013-01-11 16:34:31 -05:00

Makefile.in

[svn-r23152] I took out the obsolete function H5PSIwrite_chunk and its related test and performance test.

2013-01-11 16:34:31 -05:00

mergemsg.h5

…

mf.c

[svn-r22676] Changes needed to make the default free-list mapping from H5FD_FLMAP_SINGLE to H5FD_FLMAP_DICHOTOMY.

2012-08-13 15:04:20 -05:00

mount.c

[svn-r22987] ported revisions from 22742 to 22986 from the trunk

2012-10-29 13:59:05 -05:00

mtime.c

[svn-r20529] Purpose: Add testing for bug 1864

2011-04-15 17:05:23 -05:00

multi_file_v16-r.h5

[svn-r21015] Bug fix for Issue 2598 - In v1.6 library, there was EOA for the whole MULTI file saved in the

2011-06-22 10:47:57 -05:00

multi_file_v16-s.h5

[svn-r21015] Bug fix for Issue 2598 - In v1.6 library, there was EOA for the whole MULTI file saved in the

2011-06-22 10:47:57 -05:00

noencoder.h5

…

ntypes.c

[svn-r22646] Description:

2012-08-08 18:01:20 -05:00

objcopy.c

[svn-r22646] Description:

2012-08-08 18:01:20 -05:00

ohdr.c

[svn-r20529] Purpose: Add testing for bug 1864

2011-04-15 17:05:23 -05:00

pool.c

[svn-r19272] Description:

2010-08-20 16:37:12 -05:00

reserved.c

[svn-r22110] Removed incorrect 'executable' svn properties.

2012-03-21 14:50:28 -05:00

set_extent.c

[svn-r20529] Purpose: Add testing for bug 1864

2011-04-15 17:05:23 -05:00

space_overflow.c

…

specmetaread.h5

[svn-r17624] Description:

2009-10-08 23:09:34 -05:00

stab.c

[svn-r23219] Description:

2013-02-01 20:53:32 -05:00

tarray.c

[svn-r18419] Description:

2010-03-18 07:23:04 -05:00

tarrold.h5

…

tattr.c

[svn-r22072] Purpose: Fix rare corruption bug (HDFFV-7879)

2012-03-15 14:16:24 -05:00

tbad_msg_count.h5

…

tbogus.h5

…

tcheck_version.c

[svn-r17832] Bug fix:(sort of)

2009-11-04 17:08:49 -05:00

tchecksum.c

…

tconfig.c

[svn-r18197] Description:

2010-01-29 23:29:13 -05:00

tcoords.c

…

test_filters_be.h5

[svn-r23147] ported revisions 23081:23145 from the trunk

2013-01-09 15:23:07 -05:00

test_filters_le.h5

[svn-r23147] ported revisions 23081:23145 from the trunk

2013-01-09 15:23:07 -05:00

testcheck_version.sh.in

[svn-r22709] HDFFV-8129: reconfigured on jam, Remove overloading of autotools TESTS var, rename configure.in to configure.ac, convert test scripts from hard *.sh to configure managed *sh.in files.

2012-08-23 11:07:43 -05:00

testerror.sh.in

[svn-r22709] HDFFV-8129: reconfigured on jam, Remove overloading of autotools TESTS var, rename configure.in to configure.ac, convert test scripts from hard *.sh to configure managed *sh.in files.

2012-08-23 11:07:43 -05:00

testframe.c

[svn-r22987] ported revisions from 22742 to 22986 from the trunk

2012-10-29 13:59:05 -05:00

testhdf5.c

[svn-r17351] Description:

2009-08-13 12:09:55 -05:00

testhdf5.h

[svn-r22987] ported revisions from 22742 to 22986 from the trunk

2012-10-29 13:59:05 -05:00

testlibinfo.sh.in

[svn-r22709] HDFFV-8129: reconfigured on jam, Remove overloading of autotools TESTS var, rename configure.in to configure.ac, convert test scripts from hard *.sh to configure managed *sh.in files.

2012-08-23 11:07:43 -05:00

testlinks_env.sh.in

[svn-r22709] HDFFV-8129: reconfigured on jam, Remove overloading of autotools TESTS var, rename configure.in to configure.ac, convert test scripts from hard *.sh to configure managed *sh.in files.

2012-08-23 11:07:43 -05:00

testmeta.c

…

tfile.c

[svn-r22676] Changes needed to make the default free-list mapping from H5FD_FLMAP_SINGLE to H5FD_FLMAP_DICHOTOMY.

2012-08-13 15:04:20 -05:00

tgenprop.c

[svn-r22987] ported revisions from 22742 to 22986 from the trunk

2012-10-29 13:59:05 -05:00

th5o.c

[svn-r20610] OpenVMS complainted about a test case in th5o.c which opened the same file twice. VMS doesn't allow it. I used the macro H5_CANNOT_OPEN_TWICE to skip the test case. In th5s.c, I created an attribute but fogot to close it in the test case for zero dimension size.

2011-04-22 15:28:43 -05:00

th5s.c

[svn-r23161] ported revisions 23146:23160 from the trunk

2013-01-14 14:45:59 -05:00

th5s.h5

…

theap.c

[svn-r17980] Description:

2009-12-10 07:36:56 -05:00

tid.c

[svn-r22582] Description:

2012-07-16 14:54:26 -05:00

titerate.c

…

tlayouto.h5

…

tmeta.c

…

tmisc.c

[svn-r22287] Description:

2012-04-16 16:20:26 -05:00

tmtimen.h5

…

tmtimeo.h5

…

trefer.c

[svn-r21124] Issue 2763 - adding OAPL_ID as a new parameter to H5Rdereference. A followup commit for r21117. I made 2 changes:

2011-07-19 15:20:01 -05:00

trefstr.c

[svn-r18388] Description:

2010-03-06 16:19:57 -05:00

tselect.c

[svn-r19472] Description:

2010-09-23 10:03:42 -05:00

tsizeslheap.h5

[svn-r19076] Purpose: Fix bug 1951

2010-07-16 11:32:49 -05:00

tskiplist.c

[svn-r21603] Purpose: Add generic skip list implementation

2011-10-18 16:27:58 -05:00

tsohm.c

[svn-r22668] Description:

2012-08-11 16:27:58 -05:00

ttime.c

…

ttsafe_acreate.c

[svn-r19367] Purpose:

2010-09-10 11:15:34 -05:00

ttsafe_cancel.c

[svn-r19367] Purpose:

2010-09-10 11:15:34 -05:00

ttsafe_dcreate.c

[svn-r19367] Purpose:

2010-09-10 11:15:34 -05:00

ttsafe_error.c

[svn-r19481] I'm backing out my fix for bug 1707 because there're some unresolved issues - r19441 and 19467.

2010-09-27 14:02:48 -05:00

ttsafe.c

[svn-r19367] Purpose:

2010-09-10 11:15:34 -05:00

ttsafe.h

[svn-r19367] Purpose:

2010-09-10 11:15:34 -05:00

ttst.c

[svn-r17980] Description:

2009-12-10 07:36:56 -05:00

tunicode.c

[svn-r22646] Description:

2012-08-08 18:01:20 -05:00

tvlstr.c

[svn-r20536] Description:

2011-04-17 13:57:07 -05:00

tvltypes.c

[svn-r17351] Description:

2009-08-13 12:09:55 -05:00

unlink.c

[svn-r21923] Description:

2012-02-09 21:16:52 -05:00

vfd.c

[svn-r23219] Description:

2013-02-01 20:53:32 -05:00