mirror of
https://github.com/HDFGroup/hdf5.git
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d28bc61b33
h5repack new features Description: implemented some features of h5repack , mostly borrowed from hrepack like 1) the parsing of options 2) building a list of options 3) printing formats added a test program that generates files and calls h5diff to compare the input and output files Platforms tested: Misc. update:
295 lines
7.5 KiB
C
295 lines
7.5 KiB
C
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
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* Copyright by the Board of Trustees of the University of Illinois. *
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* All rights reserved. *
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* *
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* This file is part of HDF5. The full HDF5 copyright notice, including *
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* terms governing use, modification, and redistribution, is contained in *
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* the files COPYING and Copyright.html. COPYING can be found at the root *
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* of the source code distribution tree; Copyright.html can be found at the *
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* root level of an installed copy of the electronic HDF5 document set and *
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* is linked from the top-level documents page. It can also be found at *
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* http://hdf.ncsa.uiuc.edu/HDF5/doc/Copyright.html. If you do not have *
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* access to either file, you may request a copy from hdfhelp@ncsa.uiuc.edu. *
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* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
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#include <stdlib.h>
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#include "h5repack_opttable.h"
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/*-------------------------------------------------------------------------
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* Function: options_table_init
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*
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* Purpose: init options table
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*
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* Return: 0, ok, -1, fail
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*
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*-------------------------------------------------------------------------
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*/
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int options_table_init( options_table_t **tbl )
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{
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int i;
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options_table_t* table = (options_table_t*) malloc(sizeof(options_table_t));
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if (table==NULL) {
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printf("Error: not enough memory for options table\n");
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return -1;
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}
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table->size = 3;
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table->nelems = 0;
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table->objs = (pack_info_t*) malloc(table->size * sizeof(pack_info_t));
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if (table->objs==NULL) {
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printf("Error: not enough memory for options table\n");
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return -1;
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}
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for (i = 0; i < table->size; i++) {
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strcpy(table->objs[i].path,"\0");
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table->objs[i].comp.info = -1;
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table->objs[i].comp.type = -1;
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table->objs[i].chunk.rank = -1;
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}
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*tbl = table;
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return 0;
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}
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/*-------------------------------------------------------------------------
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* Function: options_table_free
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*
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* Purpose: free table memory
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*
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* Return: 0
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*
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*-------------------------------------------------------------------------
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*/
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int options_table_free( options_table_t *table )
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{
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free(table->objs);
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free(table);
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return 0;
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}
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/*-------------------------------------------------------------------------
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* Function: options_add_chunk
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*
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* Purpose: add a chunking -c option to the option list
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*
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* Return: 0, ok, -1, fail
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*
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*-------------------------------------------------------------------------
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*/
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int options_add_chunk( obj_list_t *obj_list,
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int n_objs,
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hsize_t *chunk_lengths,
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int chunk_rank,
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options_table_t *table )
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{
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int i, j, k, I, added=0, found=0;
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if (table->nelems+n_objs >= table->size) {
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table->size += n_objs;
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table->objs = (pack_info_t*)realloc(table->objs, table->size * sizeof(pack_info_t));
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if (table->objs==NULL) {
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printf("Error: not enough memory for options table\n");
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return -1;
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}
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for (i = table->nelems; i < table->size; i++) {
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strcpy(table->objs[i].path,"\0");
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table->objs[i].comp.info = -1;
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table->objs[i].comp.type = -1;
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table->objs[i].chunk.rank = -1;
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}
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}
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/* search if this object is already in the table; "path" is the key */
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if (table->nelems>0)
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{
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/* go tru the supplied list of names */
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for (j = 0; j < n_objs; j++)
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{
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/* linear table search */
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for (i = 0; i < table->nelems; i++)
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{
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/*already on the table */
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if (strcmp(obj_list[j].obj,table->objs[i].path)==0)
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{
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/* already chunk info inserted for this one; exit */
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if (table->objs[i].chunk.rank>0)
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{
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printf("Input Error: chunk information already inserted for <%s>\n",obj_list[j].obj);
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exit(1);
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}
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/* insert the chunk info */
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else
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{
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table->objs[i].chunk.rank = chunk_rank;
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for (k = 0; k < chunk_rank; k++)
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table->objs[i].chunk.chunk_lengths[k] = chunk_lengths[k];
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found=1;
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break;
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}
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} /* if */
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} /* i */
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if (found==0)
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{
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/* keep the grow in a temp var */
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I = table->nelems + added;
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added++;
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strcpy(table->objs[I].path,obj_list[j].obj);
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table->objs[I].chunk.rank = chunk_rank;
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for (k = 0; k < chunk_rank; k++)
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table->objs[I].chunk.chunk_lengths[k] = chunk_lengths[k];
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}
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} /* j */
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}
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/* first time insertion */
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else
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{
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/* go tru the supplied list of names */
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for (j = 0; j < n_objs; j++)
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{
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I = table->nelems + added;
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added++;
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strcpy(table->objs[I].path,obj_list[j].obj);
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table->objs[I].chunk.rank = chunk_rank;
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for (k = 0; k < chunk_rank; k++)
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table->objs[I].chunk.chunk_lengths[k] = chunk_lengths[k];
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}
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}
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table->nelems+= added;
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return 0;
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}
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/*-------------------------------------------------------------------------
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* Function: options_add_comp
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*
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* Purpose: add a compression -t option to the option list
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*
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* Return: 0, ok, -1, fail
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*
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*-------------------------------------------------------------------------
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*/
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int options_add_comp( obj_list_t *obj_list,
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int n_objs,
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comp_info_t comp,
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options_table_t *table )
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{
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int i, j, I, added=0, found=0;
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if (table->nelems+n_objs >= table->size) {
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table->size += n_objs;
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table->objs = (pack_info_t*)realloc(table->objs, table->size * sizeof(pack_info_t));
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if (table->objs==NULL) {
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printf("Error: not enough memory for options table\n");
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return -1;
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}
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for (i = table->nelems; i < table->size; i++) {
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strcpy(table->objs[i].path,"\0");
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table->objs[i].comp.info = -1;
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table->objs[i].comp.type = -1;
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table->objs[i].chunk.rank = -1;
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}
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}
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/* search if this object is already in the table; "path" is the key */
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if (table->nelems>0)
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{
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/* go tru the supplied list of names */
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for (j = 0; j < n_objs; j++)
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{
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/* linear table search */
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for (i = 0; i < table->nelems; i++)
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{
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/*already on the table */
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if (strcmp(obj_list[j].obj,table->objs[i].path)==0)
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{
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/* already COMP info inserted for this one; exit */
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if (table->objs[i].comp.type>0)
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{
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printf("Input Error: compression information already inserted for <%s>\n",obj_list[j].obj);
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exit(1);
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}
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/* insert the comp info */
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else
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{
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table->objs[i].comp = comp;
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found=1;
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break;
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}
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} /* if */
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} /* i */
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if (found==0)
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{
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/* keep the grow in a temp var */
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I = table->nelems + added;
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added++;
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strcpy(table->objs[I].path,obj_list[j].obj);
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table->objs[I].comp = comp;
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}
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} /* j */
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}
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/* first time insertion */
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else
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{
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/* go tru the supplied list of names */
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for (j = 0; j < n_objs; j++)
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{
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I = table->nelems + added;
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added++;
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strcpy(table->objs[I].path,obj_list[j].obj);
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table->objs[I].comp = comp;
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}
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}
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table->nelems+= added;
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return 0;
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}
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/*-------------------------------------------------------------------------
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* Function: options_get_object
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*
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* Purpose: get object from table; "path" is the key
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*
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* Return: pack_info_t* OBJECT or NULL if not found; PATH is the key
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*
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*-------------------------------------------------------------------------
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*/
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pack_info_t* options_get_object( char *path,
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options_table_t *table )
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{
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int i;
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for ( i = 0; i < table->nelems; i++)
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{
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/* found it */
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if (strcmp(table->objs[i].path,path)==0)
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{
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return (&table->objs[i]);
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}
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}
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return NULL;
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}
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