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---------------------- ./src/H5T.c Fixed a typo in the registration of the `unsigned char' to `unsigned long long' type conversion that caused it to not be registered, falling back to software whenever that conversion path was taken. ./MANIFEST ./test/Makefile.in ./test/testhdf5.c ./test/testhdf5.h ./test/theap.c [REMOVED] ./test/lheap.c [NEW] ./test/tohdr.c [REMOVED] ./test/ohdr.c [NEW] ./test/tstab.c [REMOVED] ./test/stab.c [NEW] Removed the `t' from the front of these names and made each test a stand-alone program following the format of most of the other tests. ./test/big.c Uses libh5test.a but always sets the low-level driver to 1GB file family. The `#if' near the top to set the data space to 8GB has been simplified now that `long_long' is always defined and the error message is improved when `long_long' isn't wide enough. Cleanup code was added to the error handling. ./test/gheap.c ./test/istore.c Uses libh5test.a. Added error cleanup code. ./test/dtypes.c ./test/h5test.c Added 68 new tests that check hardware and software conversions between `long long' and `unsigned long long' and the other integer types. The tests only run on machines where sizeof(long_long)!=sizeof(long). We test a total of 180 different integer conversions, half in hardware and half in software. Cut down the number of times each test is run from 5 to 1 so it doesn't take so long. If you want to run more times there's a constant that can be changed at the top of the file. ./test/extend.c Removed unused variable. ./test/h5test.c ./test/h5test.h ./test/external.c ./test/fillval.c The h5_cleanup() returns true/false so it can be used in an `if' statement to clean up additional files. ./doc/html/Environment.html Indented. Added HDF5_PREFIX and HDF5_DRIVER descriptions. ./src/H5P.c Changed the trace type for the second argument from `Iu' to `x' since it's an output parameter. ./INSTALL Added a warning that the GNU zlib that comes with the latest version of HDF4 is too old to use with HDF5 and must be renamed so configure doesn't see it when `--enable-hdf4' is used.
197 lines
7.3 KiB
Plaintext
197 lines
7.3 KiB
Plaintext
This file contains instructions for the installation of HDF5 on
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Unix-like systems. First, one must obtain a tarball of the HDF5
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release from the ftp://hdf.ncsa.uiuc.edu/pub/dist/HDF5 repository.
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The files are available in uncompressed tar, gzip, bzip2, and compress
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formats.
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For those that like to live dangerously and don't like to read ;-) you
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can do the following:
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$ tar xf hdf5-1.0.0a.tar
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$ cd hdf5-1.0.0a
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$ sh configure
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$ make # Builds library and tools
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$ make test # Builds and runs confidence tests.
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# NOTE: if fails, run the
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# command in the test directory
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$ make install # Optional
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Note:
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For the users of the Intel TFLOPS machine, a special sequence of steps
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for the install may be found in the file: INSTALL.ascired.
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=======
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Step 0: Install optional third-party packages.
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* GNU zlib compression library, version 1.0.2 or later is used for
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the `deflate' compression method if available; otherwise no
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compression filters will be predefined.
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Step 1. Unpack the source tree.
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* The tarball will unpack into an hdf5-1.1.0 directory with one of
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the following commands:
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$ tar xf hdf5-1.1.0.tar OR
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$ gunzip <hdf5-1.1.0.tar.gz |tar xf - OR
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$ bunzip2 <hdf5-1.1.0.tar.bz2 |tar xf - OR
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$ uncompress -c <hdf5-1.1.0.tar.Z |tar xf -
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Step 2. Configure.
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* HDF5 uses the GNU autoconf program for configuration. Most
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installations can be configured by typing just (from the
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hdf5-1.1.0 directory)
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$ sh configure
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* The configuration process can be controlled through environment
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variables, command-line switches, and host configuration files.
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For a complete list of switches say `sh configure --help'.
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* Host configuration files are located in the `config' directory
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and are based on architecture name, vendor name, and/or operating
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system which are displayed near the beginning of the `configure'
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output. Not all hosts require a host configuration file.
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* The C compiler and flags, the `ar' and `ranlib' program names,
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and the `make' program can be specified with environment
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variables if configure doesn't properly detect them and they are
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not defined in a host config file.
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CC Name of the C compiler.
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CFLAGS Switches for the C compiler.
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CPPFLAGS Additional switches for the .c -> .o step.
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AR Name of the `ar' program.
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RANLIB Name of the `ranlib' program or `:' if none.
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MAKE Name of the `make' program (GNU make is preferred)
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* This version of HDF5 is normally built with various debugging
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code enabled. To turn it off add the `--disable-debug' switch
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to the configure command. Even if debugging support is compiled
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into the library one must still enable the code at runtime with
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the HDF5_DEBUG environment variable (see Debugging.html).
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* This version of HDF5 is normally built with support for symbolic
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debugging with dbx or gdb and without compiler optimization
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switches. To disable symbolic debugging and enable
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optimizations add `--enable-production' to the configure
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command.
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* This version of HDF5 is normally built with the ability to print
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the names, arguments, and return values of all API functions
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when they're called. For more information refer to the
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Debugging.html file. To disable tracing support add
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`--disable-trace' to the configure command.
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* Configure will look for the GNU zlib (a compression library) in
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the standard places for your environment. If it's installed in
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a non-standard place then absolute path names can be specified
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with `--with-zlib=INCDIR,LIBDIR' for the include file and/or
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library. To prevent detection of zlib use `--without-zlib'.
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* The HDF5-to-HDF4 conversion tool requires the HDF4 library and header
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files which are auto-detected by configure. If they are in a
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non-standard place then absolute path names can be specified with
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`--with-hdf4=INCDIR,LIBDIR' for the include file and/or library. To
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prevent detection of hdf4 use `--without-hdf4'. Beware of the GNU zlib
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that comes with hdf4 -- it's too old to use with hdf5 (hdf4 tools can be
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linked with the newer versions of zlib).
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* Old versions of gcc (<2.8.0) may experience register allocation
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problems on some architectures. If this happens then the
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`--disable-hsizet' can be given but the resulting library will
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be unable to handle datasets larger than 4GB.
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* Libraries, include files, programs, and documentation are
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installed (when one says `make install') under /usr/local/lib,
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/usr/local/include, /usr/local/bin, and /usr/local/man.
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However, if you want them in some other location you can specify
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a prefix to use instead of /usr/local. For instance, to install
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in /usr/lib, /usr/include, /usr/bin, and /usr/man one would say
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$ ./configure --prefix=/usr
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The library can be used directly from the source tree without
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installing it.
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Step 3. Compile library, tests, and programs.
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* Build library targets by saying
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$ make
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Note: If you supplied some other make command through the MAKE
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environment variable in the previous step then use that command
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instead. The same applies below.
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Note: When using GNU make you can add `-j -l6' to the make
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command to compile in parallel on SMP machines. Do not give a
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number after the `-j' since GNU make will turn it off for
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recursive invocations of make.
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Step 4. Run confidence tests.
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* All confidence tests should be run by saying
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$ make test
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The command will fail if any test fails, and one will see the
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word "*FAIL*" in the output.
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* Some old versions of make will report that `test is up to
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date'. If this happens then run `make _test' instead or run
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`make test' from within the test directory.
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* Temporary files will be deleted by each test when it completes,
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but may continue to exist in an incomplete state if the test
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fails. To prevent deletion of the files define the
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HDF5_NOCLEANUP environment variable.
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Step 5. Install public files.
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* Install the library, header files, and programs by saying:
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$ make install
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* This step will fail unless you have permission to write to the
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installation directories. Of course, you can use the header
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files, library, and programs directly out of the source tree if
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you like, skipping this step. The directory specified for the
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--prefix switch (or "/usr/local") must exist, but the
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directories under it are created automatically by make.
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* The minimum which must be installed are:
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The library:
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./src/libhdf5.a
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The public header files:
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./src/H5*public.h
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The main header file:
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./src/hdf5.h
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The configuration information:
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./src/H5config.h
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* Additional useful things which are installed:
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The tools library:
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./tools/libh5tools.a
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Some tools:
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./tools/h5ls (list file contents)
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./tools/h5dump (dump file contents)
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./tools/h5repart (repartition file families)
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./tools/h5toh4 (hdf5 to hdf4 file converter)
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./tools/h5debug (low-level file debugging)
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./tools/h5import (a demo)
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Step 6. Subscribe to mailing lists.
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* Subscribe to the mailing lists described in the README file.
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