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hdf5/src/H5S.c
Quincey Koziol 75f4e51a1a [svn-r22582] Description: 
Refactor ID class registration to be more like how other "class"s in the
library are registered, and clean up compiler warnings.

Tested on:
    Mac OSX/64 10.7.4 (amazon) w/debug
    (Too minor to require h5comittest)
2012-07-16 14:54:26 -05:00

2187 lines
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/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by The HDF Group. *
* Copyright by the Board of Trustees of the University of Illinois. *
* All rights reserved. *
* *
* This file is part of HDF5. The full HDF5 copyright notice, including *
* terms governing use, modification, and redistribution, is contained in *
* the files COPYING and Copyright.html. COPYING can be found at the root *
* of the source code distribution tree; Copyright.html can be found at the *
* root level of an installed copy of the electronic HDF5 document set and *
* is linked from the top-level documents page. It can also be found at *
* http://hdfgroup.org/HDF5/doc/Copyright.html. If you do not have *
* access to either file, you may request a copy from help@hdfgroup.org. *
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
/****************/
/* Module Setup */
/****************/
#define H5S_PACKAGE /*suppress error about including H5Spkg */
/* Interface initialization */
#define H5_INTERFACE_INIT_FUNC H5S_init_interface
/***********/
/* Headers */
/***********/
#include "H5private.h" /* Generic Functions */
#include "H5Eprivate.h" /* Error handling */
#include "H5Fprivate.h" /* Files */
#include "H5FLprivate.h" /* Free lists */
#include "H5Iprivate.h" /* IDs */
#include "H5MMprivate.h" /* Memory management */
#include "H5Oprivate.h" /* Object headers */
#include "H5Spkg.h" /* Dataspaces */
/****************/
/* Local Macros */
/****************/
/* Version of datatype encoding */
#define H5S_ENCODE_VERSION 0
/******************/
/* Local Typedefs */
/******************/
/********************/
/* Local Prototypes */
/********************/
static herr_t H5S_set_extent_simple (H5S_t *space, unsigned rank,
const hsize_t *dims, const hsize_t *max);
static htri_t H5S_is_simple(const H5S_t *sdim);
static herr_t H5S_encode(H5S_t *obj, unsigned char *buf, size_t *nalloc);
static H5S_t *H5S_decode(const unsigned char *buf);
/*********************/
/* Package Variables */
/*********************/
/*****************************/
/* Library Private Variables */
/*****************************/
#ifdef H5_HAVE_PARALLEL
/* Global vars whose value can be set from environment variable also */
hbool_t H5S_mpi_opt_types_g = TRUE;
#endif /* H5_HAVE_PARALLEL */
/*******************/
/* Local Variables */
/*******************/
/* Declare a free list to manage the H5S_extent_t struct */
H5FL_DEFINE(H5S_extent_t);
/* Declare a free list to manage the H5S_t struct */
H5FL_DEFINE(H5S_t);
/* Declare a free list to manage the array's of hsize_t's */
H5FL_ARR_DEFINE(hsize_t,H5S_MAX_RANK);
/* Dataspace ID class */
static const H5I_class_t H5I_DATASPACE_CLS[1] = {{
H5I_DATASPACE, /* ID class value */
0, /* Class flags */
64, /* Minimum hash size for class */
2, /* # of reserved IDs for class */
(H5I_free_t)H5S_close /* Callback routine for closing objects of this class */
}};
/*--------------------------------------------------------------------------
NAME
H5S_init_interface -- Initialize interface-specific information
USAGE
herr_t H5S_init_interface()
RETURNS
Non-negative on success/Negative on failure
DESCRIPTION
Initializes any interface-specific data or routines.
--------------------------------------------------------------------------*/
static herr_t
H5S_init_interface(void)
{
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_NOAPI_NOINIT
/* Initialize the atom group for the file IDs */
if(H5I_register_type(H5I_DATASPACE_CLS) < 0)
HGOTO_ERROR(H5E_DATASPACE, H5E_CANTINIT, FAIL, "unable to initialize interface")
#ifdef H5_HAVE_PARALLEL
{
/* Allow MPI buf-and-file-type optimizations? */
const char *s = HDgetenv ("HDF5_MPI_OPT_TYPES");
if (s && HDisdigit(*s))
H5S_mpi_opt_types_g = (hbool_t)HDstrtol (s, NULL, 0);
}
#endif /* H5_HAVE_PARALLEL */
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5S_init_interface() */
/*--------------------------------------------------------------------------
NAME
H5S_term_interface
PURPOSE
Terminate various H5S objects
USAGE
void H5S_term_interface()
RETURNS
Non-negative on success/Negative on failure
DESCRIPTION
Release the atom group and any other resources allocated.
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
Can't report errors...
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
int
H5S_term_interface(void)
{
int n = 0;
FUNC_ENTER_NOAPI_NOINIT_NOERR
if(H5_interface_initialize_g) {
if((n = H5I_nmembers(H5I_DATASPACE))) {
H5I_clear_type(H5I_DATASPACE, FALSE, FALSE);
} /* end if */
else {
/* Free data types */
H5I_dec_type_ref(H5I_DATASPACE);
/* Shut down interface */
H5_interface_initialize_g = 0;
n = 1; /*H5I*/
} /* end else */
} /* end if */
FUNC_LEAVE_NOAPI(n)
} /* end H5S_term_interface() */
/*--------------------------------------------------------------------------
NAME
H5S_create
PURPOSE
Create empty, typed dataspace
USAGE
H5S_t *H5S_create(type)
H5S_type_t type; IN: Dataspace type to create
RETURNS
Pointer to dataspace on success, NULL on failure
DESCRIPTION
Creates a new dataspace of a given type. The extent is undefined and the
selection is set to the "all" selection.
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
H5S_t *
H5S_create(H5S_class_t type)
{
H5S_t *new_ds = NULL; /* New dataspace created */
H5S_t *ret_value; /* Return value */
FUNC_ENTER_NOAPI(NULL)
/* Create a new dataspace */
if(NULL == (new_ds = H5FL_MALLOC(H5S_t)))
HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, NULL, "memory allocation failed")
/* Initialize default dataspace state */
new_ds->extent.type = type;
if(type == H5S_NULL)
new_ds->extent.version = H5O_SDSPACE_VERSION_2;
else
new_ds->extent.version = H5O_SDSPACE_VERSION_1;
new_ds->extent.rank = 0;
new_ds->extent.size = new_ds->extent.max = NULL;
switch(type) {
case H5S_SCALAR:
new_ds->extent.nelem = 1;
break;
case H5S_SIMPLE:
case H5S_NULL:
new_ds->extent.nelem = 0;
break;
case H5S_NO_CLASS:
default:
HDassert("unknown dataspace (extent) type" && 0);
break;
} /* end switch */
/* Start with "all" selection */
if(H5S_select_all(new_ds, FALSE) < 0)
HGOTO_ERROR(H5E_DATASPACE, H5E_CANTSET, NULL, "unable to set all selection")
/* Reset common selection info pointer */
new_ds->select.sel_info.hslab = NULL;
/* Reset "shared" info on extent */
if(H5O_msg_reset_share(H5O_SDSPACE_ID, &(new_ds->extent.sh_loc)) < 0)
HGOTO_ERROR(H5E_DATASPACE, H5E_CANTRESET, NULL, "unable to reset shared component info")
/* Set return value */
ret_value = new_ds;
done:
if(ret_value == NULL) {
if(new_ds && H5S_close(new_ds) < 0)
HDONE_ERROR(H5E_DATASPACE, H5E_CANTRELEASE, NULL, "unable to release dataspace")
} /* end if */
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5S_create() */
/*--------------------------------------------------------------------------
NAME
H5Screate
PURPOSE
Create empty, typed dataspace
USAGE
hid_t H5Screate(type)
H5S_type_t type; IN: Dataspace type to create
RETURNS
Valid dataspace ID on success, negative on failure
DESCRIPTION
Creates a new dataspace of a given type. The extent & selection are
undefined
GLOBAL VARIABLES
COMMENTS, BUGS, ASSUMPTIONS
EXAMPLES
REVISION LOG
--------------------------------------------------------------------------*/
hid_t
H5Screate(H5S_class_t type)
{
H5S_t *new_ds=NULL; /* New dataspace structure */
hid_t ret_value; /* Return value */
FUNC_ENTER_API(FAIL)
H5TRACE1("i", "Sc", type);
/* Check args */
if(type <= H5S_NO_CLASS || type > H5S_NULL) /* don't allow complex dataspace yet */
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "invalid dataspace type")
if(NULL == (new_ds = H5S_create(type)))
HGOTO_ERROR(H5E_DATASPACE, H5E_CANTCREATE, FAIL, "unable to create dataspace")
/* Atomize */
if((ret_value = H5I_register (H5I_DATASPACE, new_ds, TRUE)) < 0)
HGOTO_ERROR(H5E_ATOM, H5E_CANTREGISTER, FAIL, "unable to register dataspace atom")
done:
if(ret_value < 0) {
if(new_ds && H5S_close(new_ds) < 0)
HDONE_ERROR(H5E_DATASPACE, H5E_CANTRELEASE, FAIL, "unable to release dataspace")
} /* end if */
FUNC_LEAVE_API(ret_value)
} /* end H5Screate() */
/*-------------------------------------------------------------------------
* Function: H5S_extent_release
*
* Purpose: Releases all memory associated with a dataspace extent.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Quincey Koziol
* Thursday, July 23, 1998
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
herr_t
H5S_extent_release(H5S_extent_t *extent)
{
herr_t ret_value=SUCCEED; /* Return value */
FUNC_ENTER_NOAPI(FAIL)
assert(extent);
/* Release extent */
if(extent->type == H5S_SIMPLE) {
if(extent->size)
extent->size = H5FL_ARR_FREE(hsize_t, extent->size);
if(extent->max)
extent->max = H5FL_ARR_FREE(hsize_t, extent->max);
} /* end if */
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5S_extent_release() */
/*-------------------------------------------------------------------------
* Function: H5S_close
*
* Purpose: Releases all memory associated with a dataspace.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Robb Matzke
* Tuesday, December 9, 1997
*
*-------------------------------------------------------------------------
*/
herr_t
H5S_close(H5S_t *ds)
{
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_NOAPI(FAIL)
HDassert(ds);
/* Release selection (this should come before the extent release) */
if(H5S_SELECT_RELEASE(ds) < 0)
HDONE_ERROR(H5E_DATASPACE, H5E_CANTRELEASE, FAIL, "unable to release dataspace selection")
/* Release extent */
if(H5S_extent_release(&ds->extent) < 0)
HDONE_ERROR(H5E_DATASPACE, H5E_CANTRELEASE, FAIL, "unable to release dataspace extent")
/* Release the main structure */
ds = H5FL_FREE(H5S_t, ds);
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5S_close() */
/*-------------------------------------------------------------------------
* Function: H5Sclose
*
* Purpose: Release access to a dataspace object.
*
* Return: Non-negative on success/Negative on failure
*
* Errors:
*
* Programmer: Robb Matzke
* Tuesday, December 9, 1997
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
herr_t
H5Sclose(hid_t space_id)
{
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_API(FAIL)
H5TRACE1("e", "i", space_id);
/* Check args */
if (NULL == H5I_object_verify(space_id,H5I_DATASPACE))
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a dataspace")
/* When the reference count reaches zero the resources are freed */
if(H5I_dec_app_ref(space_id) < 0)
HGOTO_ERROR(H5E_DATASPACE, H5E_CANTDEC, FAIL, "problem freeing id")
done:
FUNC_LEAVE_API(ret_value)
} /* end H5Sclose() */
/*-------------------------------------------------------------------------
* Function: H5Scopy
*
* Purpose: Copies a dataspace.
*
* Return: Success: ID of the new dataspace
*
* Failure: Negative
*
* Programmer: Robb Matzke
* Friday, January 30, 1998
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
hid_t
H5Scopy(hid_t space_id)
{
H5S_t *src;
H5S_t *dst = NULL;
hid_t ret_value;
FUNC_ENTER_API(FAIL)
H5TRACE1("i", "i", space_id);
/* Check args */
if(NULL == (src = (H5S_t *)H5I_object_verify(space_id, H5I_DATASPACE)))
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a dataspace")
/* Copy */
if(NULL == (dst = H5S_copy(src, FALSE, TRUE)))
HGOTO_ERROR(H5E_DATASPACE, H5E_CANTINIT, FAIL, "unable to copy dataspace")
/* Atomize */
if((ret_value = H5I_register (H5I_DATASPACE, dst, TRUE)) < 0)
HGOTO_ERROR(H5E_ATOM, H5E_CANTREGISTER, FAIL, "unable to register dataspace atom")
done:
if(ret_value < 0) {
if(dst && H5S_close(dst) < 0)
HDONE_ERROR(H5E_DATASPACE, H5E_CANTRELEASE, FAIL, "unable to release dataspace")
} /* end if */
FUNC_LEAVE_API(ret_value)
} /* end H5Scopy() */
/*-------------------------------------------------------------------------
* Function: H5Sextent_copy
*
* Purpose: Copies a dataspace extent.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Quincey Koziol
* Thursday, July 23, 1998
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
herr_t
H5Sextent_copy(hid_t dst_id,hid_t src_id)
{
H5S_t *src;
H5S_t *dst;
hid_t ret_value = SUCCEED;
FUNC_ENTER_API(FAIL)
H5TRACE2("e", "ii", dst_id, src_id);
/* Check args */
if(NULL == (src = (H5S_t *)H5I_object_verify(src_id, H5I_DATASPACE)))
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a dataspace")
if(NULL == (dst = (H5S_t *)H5I_object_verify(dst_id, H5I_DATASPACE)))
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a dataspace")
/* Copy */
if(H5S_extent_copy(&(dst->extent), &(src->extent), TRUE) < 0)
HGOTO_ERROR(H5E_DATASPACE, H5E_CANTCOPY, FAIL, "can't copy extent")
done:
FUNC_LEAVE_API(ret_value)
} /* end H5Sextent_copy() */
/*-------------------------------------------------------------------------
* Function: H5S_extent_copy
*
* Purpose: Copies a dataspace extent
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Quincey Koziol
* Wednesday, June 3, 1998
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
herr_t
H5S_extent_copy(H5S_extent_t *dst, const H5S_extent_t *src, hbool_t copy_max)
{
unsigned u;
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_NOAPI(FAIL)
/* Copy the regular fields */
dst->type = src->type;
dst->version = src->version;
dst->nelem = src->nelem;
dst->rank = src->rank;
switch (src->type) {
case H5S_NULL:
case H5S_SCALAR:
dst->size = NULL;
dst->max = NULL;
break;
case H5S_SIMPLE:
if(src->size) {
dst->size = (hsize_t *)H5FL_ARR_MALLOC(hsize_t, (size_t)src->rank);
for(u = 0; u < src->rank; u++)
dst->size[u] = src->size[u];
} /* end if */
else
dst->size = NULL;
if(copy_max && src->max) {
dst->max = (hsize_t *)H5FL_ARR_MALLOC(hsize_t, (size_t)src->rank);
for(u = 0; u < src->rank; u++)
dst->max[u] = src->max[u];
} /* end if */
else
dst->max = NULL;
break;
case H5S_NO_CLASS:
default:
HDassert("unknown dataspace type" && 0);
break;
} /* end switch */
/* Copy the shared object info */
if(H5O_set_shared(&(dst->sh_loc), &(src->sh_loc)) < 0)
HGOTO_ERROR(H5E_DATASPACE, H5E_CANTCOPY, FAIL, "can't copy shared information")
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5S_extent_copy() */
/*-------------------------------------------------------------------------
* Function: H5S_copy
*
* Purpose: Copies a dataspace, by copying the extent and selection through
* H5S_extent_copy and H5S_select_copy. If the SHARE_SELECTION flag
* is set, then the selection can be shared between the source and
* destination dataspaces. (This should only occur in situations
* where the destination dataspace will immediately change to a new
* selection)
*
* Return: Success: A pointer to a new copy of SRC
*
* Failure: NULL
*
* Programmer: Robb Matzke
* Thursday, December 4, 1997
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
H5S_t *
H5S_copy(const H5S_t *src, hbool_t share_selection, hbool_t copy_max)
{
H5S_t *dst = NULL;
H5S_t *ret_value; /* Return value */
FUNC_ENTER_NOAPI(NULL)
if(NULL == (dst = H5FL_MALLOC(H5S_t)))
HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, NULL, "memory allocation failed")
/* Copy the source dataspace's extent */
if(H5S_extent_copy(&(dst->extent), &(src->extent), copy_max) < 0)
HGOTO_ERROR(H5E_DATASPACE, H5E_CANTCOPY, NULL, "can't copy extent")
/* Copy the source dataspace's selection */
if(H5S_select_copy(dst, src, share_selection) < 0)
HGOTO_ERROR(H5E_DATASPACE, H5E_CANTCOPY, NULL, "can't copy select")
/* Set the return value */
ret_value = dst;
done:
if(NULL == ret_value)
if(dst)
dst = H5FL_FREE(H5S_t, dst);
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5S_copy() */
/*-------------------------------------------------------------------------
* Function: H5S_get_simple_extent_npoints
*
* Purpose: Determines how many data points a dataset extent has.
*
* Return: Success: Number of data points in the dataset extent.
*
* Failure: negative
*
* Programmer: Robb Matzke
* Tuesday, December 9, 1997
*
* Note: This routine participates in the "Inlining C function pointers"
* pattern, don't call it directly, use the appropriate macro
* defined in H5Sprivate.h.
*
* Modifications:
* Changed Name - QAK 7/7/98
*
*-------------------------------------------------------------------------
*/
hssize_t
H5S_get_simple_extent_npoints(const H5S_t *ds)
{
hssize_t ret_value;
FUNC_ENTER_NOAPI(-1)
/* check args */
HDassert(ds);
/* Get the number of elements in extent */
ret_value = (hssize_t)ds->extent.nelem;
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5S_get_simple_extent_npoints() */
/*-------------------------------------------------------------------------
* Function: H5Sget_simple_extent_npoints
*
* Purpose: Determines how many data points a dataset extent has.
*
* Return: Success: Number of data points in the dataset.
*
* Failure: negative
*
* Programmer: Robb Matzke
* Tuesday, December 9, 1997
*
* Modifications:
* Changed Name - QAK 7/7/98
*
*-------------------------------------------------------------------------
*/
hssize_t
H5Sget_simple_extent_npoints(hid_t space_id)
{
H5S_t *ds;
hssize_t ret_value;
FUNC_ENTER_API(FAIL)
H5TRACE1("Hs", "i", space_id);
/* Check args */
if(NULL == (ds = (H5S_t *)H5I_object_verify(space_id, H5I_DATASPACE)))
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a dataspace")
ret_value = (hssize_t)H5S_GET_EXTENT_NPOINTS(ds);
done:
FUNC_LEAVE_API(ret_value)
} /* end H5Sget_simple_extent_npoints() */
/*-------------------------------------------------------------------------
* Function: H5S_get_npoints_max
*
* Purpose: Determines the maximum number of data points a dataspace may
* have. If the `max' array is null then the maximum number of
* data points is the same as the current number of data points
* without regard to the hyperslab. If any element of the `max'
* array is zero then the maximum possible size is returned.
*
* Return: Success: Maximum number of data points the dataspace
* may have.
*
* Failure: 0
*
* Programmer: Robb Matzke
* Tuesday, December 9, 1997
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
hsize_t
H5S_get_npoints_max(const H5S_t *ds)
{
hsize_t ret_value;
unsigned u;
FUNC_ENTER_NOAPI(0)
/* check args */
assert(ds);
switch (H5S_GET_EXTENT_TYPE(ds)) {
case H5S_NULL:
ret_value = 0;
break;
case H5S_SCALAR:
ret_value = 1;
break;
case H5S_SIMPLE:
if (ds->extent.max) {
for (ret_value=1, u=0; u<ds->extent.rank; u++) {
if (H5S_UNLIMITED==ds->extent.max[u]) {
ret_value = HSIZET_MAX;
break;
}
else
ret_value *= ds->extent.max[u];
}
}
else {
for (ret_value=1, u=0; u<ds->extent.rank; u++)
ret_value *= ds->extent.size[u];
}
break;
case H5S_NO_CLASS:
default:
assert("unknown dataspace class" && 0);
HGOTO_ERROR(H5E_DATASPACE, H5E_UNSUPPORTED, 0, "internal error (unknown dataspace class)")
}
done:
FUNC_LEAVE_NOAPI(ret_value)
}
/*-------------------------------------------------------------------------
* Function: H5Sget_simple_extent_ndims
*
* Purpose: Determines the dimensionality of a dataspace.
*
* Return: Success: The number of dimensions in a dataspace.
*
* Failure: Negative
*
* Programmer: Robb Matzke
* Thursday, December 11, 1997
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
int
H5Sget_simple_extent_ndims(hid_t space_id)
{
H5S_t *ds;
int ret_value;
FUNC_ENTER_API(FAIL)
H5TRACE1("Is", "i", space_id);
/* Check args */
if(NULL == (ds = (H5S_t *)H5I_object_verify(space_id, H5I_DATASPACE)))
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a dataspace")
ret_value = (int)H5S_GET_EXTENT_NDIMS(ds);
done:
FUNC_LEAVE_API(ret_value)
} /* end H5Sget_simple_extent_ndims() */
/*-------------------------------------------------------------------------
* Function: H5S_get_simple_extent_ndims
*
* Purpose: Returns the number of dimensions in a dataspace.
*
* Return: Success: Non-negative number of dimensions. Zero
* implies a scalar.
*
* Failure: Negative
*
* Programmer: Robb Matzke
* Thursday, December 11, 1997
*
* Note: This routine participates in the "Inlining C function pointers"
* pattern, don't call it directly, use the appropriate macro
* defined in H5Sprivate.h.
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
int
H5S_get_simple_extent_ndims(const H5S_t *ds)
{
int ret_value; /* Return value */
FUNC_ENTER_NOAPI(FAIL)
/* check args */
HDassert(ds);
switch(H5S_GET_EXTENT_TYPE(ds)) {
case H5S_NULL:
case H5S_SCALAR:
case H5S_SIMPLE:
ret_value = (int)ds->extent.rank;
break;
case H5S_NO_CLASS:
default:
HDassert("unknown dataspace class" && 0);
HGOTO_ERROR(H5E_DATASPACE, H5E_UNSUPPORTED, FAIL, "internal error (unknown dataspace class)")
} /* end switch */
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5S_get_simple_extent_ndims() */
/*-------------------------------------------------------------------------
* Function: H5Sget_simple_extent_dims
*
* Purpose: Returns the size and maximum sizes in each dimension of
* a dataspace DS through the DIMS and MAXDIMS arguments.
*
* Return: Success: Number of dimensions, the same value as
* returned by H5Sget_simple_extent_ndims().
*
* Failure: Negative
*
* Programmer: Robb Matzke
* Thursday, December 11, 1997
*
* Modifications:
* June 18, 1998 Albert Cheng
* Added maxdims argument. Removed dims argument check
* since it can still return ndims even if both dims and
* maxdims are NULLs.
*
*-------------------------------------------------------------------------
*/
int
H5Sget_simple_extent_dims(hid_t space_id, hsize_t dims[]/*out*/,
hsize_t maxdims[]/*out*/)
{
H5S_t *ds;
int ret_value;
FUNC_ENTER_API(FAIL)
H5TRACE3("Is", "ixx", space_id, dims, maxdims);
/* Check args */
if (NULL == (ds = (H5S_t *)H5I_object_verify(space_id, H5I_DATASPACE)))
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a dataspace")
ret_value = H5S_get_simple_extent_dims(ds, dims, maxdims);
done:
FUNC_LEAVE_API(ret_value)
}
/*-------------------------------------------------------------------------
* Function: H5S_extent_get_dims
*
* Purpose: Returns the size in each dimension of a dataspace. This
* function may not be meaningful for all types of dataspaces.
*
* Return: Success: Number of dimensions. Zero implies scalar.
* Failure: Negative
*
* Programmer: Quincey Koziol
* Tuesday, June 30, 2009
*
*-------------------------------------------------------------------------
*/
int
H5S_extent_get_dims(const H5S_extent_t *ext, hsize_t dims[], hsize_t max_dims[])
{
int i; /* Local index variable */
int ret_value; /* Return value */
FUNC_ENTER_NOAPI(FAIL)
/* check args */
HDassert(ext);
switch(ext->type) {
case H5S_NULL:
case H5S_SCALAR:
ret_value = 0;
break;
case H5S_SIMPLE:
ret_value = (int)ext->rank;
for(i = 0; i < ret_value; i++) {
if(dims)
dims[i] = ext->size[i];
if(max_dims) {
if(ext->max)
max_dims[i] = ext->max[i];
else
max_dims[i] = ext->size[i];
} /* end if */
} /* end for */
break;
case H5S_NO_CLASS:
default:
HDassert("unknown dataspace class" && 0);
HGOTO_ERROR(H5E_DATASPACE, H5E_UNSUPPORTED, FAIL, "internal error (unknown dataspace class)")
} /* end switch */
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5S_extent_get_dims() */
/*-------------------------------------------------------------------------
* Function: H5S_get_simple_extent_dims
*
* Purpose: Returns the size in each dimension of a dataspace. This
* function may not be meaningful for all types of dataspaces.
*
* Return: Success: Number of dimensions. Zero implies scalar.
*
* Failure: Negative
*
* Programmer: Robb Matzke
* Thursday, December 11, 1997
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
int
H5S_get_simple_extent_dims(const H5S_t *ds, hsize_t dims[], hsize_t max_dims[])
{
int ret_value; /* Return value */
FUNC_ENTER_NOAPI(FAIL)
/* check args */
HDassert(ds);
/* Get dims for extent */
if((ret_value = H5S_extent_get_dims(&ds->extent, dims, max_dims)) < 0)
HGOTO_ERROR(H5E_DATASPACE, H5E_CANTGET, FAIL, "can't retrieve dataspace extent dims")
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5S_get_simple_extent_dims() */
/*-------------------------------------------------------------------------
* Function: H5S_write
*
* Purpose: Updates a dataspace by writing a message to an object
* header.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Robb Matzke
* Tuesday, December 9, 1997
*
*-------------------------------------------------------------------------
*/
herr_t
H5S_write(H5F_t *f, hid_t dxpl_id, H5O_t *oh, unsigned update_flags, H5S_t *ds)
{
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_NOAPI(FAIL)
HDassert(f);
HDassert(oh);
HDassert(ds);
HDassert(H5S_GET_EXTENT_TYPE(ds) >= 0);
/* Write the current dataspace extent to the dataspace message */
if(H5O_msg_write_oh(f, dxpl_id, oh, H5O_SDSPACE_ID, 0, update_flags, &(ds->extent)) < 0)
HGOTO_ERROR(H5E_DATASPACE, H5E_CANTINIT, FAIL, "can't update simple dataspace message")
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5S_write() */
/*-------------------------------------------------------------------------
* Function: H5S_append
*
* Purpose: Updates a dataspace by adding a message to an object
* header.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Quincey Koziol
* Tuesday, December 31, 2002
*
* Modifications:
*
* John Mainzer, 6/6/05
* Updated function to use the new dirtied parameter of
* H5AC_unprotect() instead of manipulating the is_dirty
* field of the cache info.
*
*-------------------------------------------------------------------------
*/
herr_t
H5S_append(H5F_t *f, hid_t dxpl_id, H5O_t *oh, H5S_t *ds)
{
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_NOAPI(FAIL)
HDassert(f);
HDassert(oh);
HDassert(ds);
HDassert(H5S_GET_EXTENT_TYPE(ds) >= 0);
/* Add the dataspace message to the object header */
if(H5O_msg_append_oh(f, dxpl_id, oh, H5O_SDSPACE_ID, 0, 0, &(ds->extent)) < 0)
HGOTO_ERROR(H5E_DATASPACE, H5E_CANTINIT, FAIL, "can't add simple dataspace message")
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5S_append() */
/*-------------------------------------------------------------------------
* Function: H5S_read
*
* Purpose: Reads the dataspace from an object header.
*
* Return: Success: Pointer to a new dataspace.
*
* Failure: NULL
*
* Programmer: Robb Matzke
* Tuesday, December 9, 1997
*
*-------------------------------------------------------------------------
*/
H5S_t *
H5S_read(const H5O_loc_t *loc, hid_t dxpl_id)
{
H5S_t *ds = NULL; /* Dataspace to return */
H5S_t *ret_value; /* Return value */
FUNC_ENTER_NOAPI(NULL)
/* check args */
HDassert(loc);
if(NULL == (ds = H5FL_CALLOC(H5S_t)))
HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, NULL, "memory allocation failed")
if(H5O_msg_read(loc, H5O_SDSPACE_ID, &(ds->extent), dxpl_id) == NULL)
HGOTO_ERROR(H5E_DATASPACE, H5E_CANTINIT, NULL, "unable to load dataspace info from dataset header")
/* Default to entire dataspace being selected */
if(H5S_select_all(ds, FALSE) < 0)
HGOTO_ERROR(H5E_DATASPACE, H5E_CANTSET, NULL, "unable to set all selection")
/* Set the value for successful return */
ret_value = ds;
done:
if(ret_value == NULL) {
if(ds != NULL)
ds = H5FL_FREE(H5S_t, ds);
} /* end if */
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5S_read() */
/*--------------------------------------------------------------------------
NAME
H5S_is_simple
PURPOSE
Check if a dataspace is simple (internal)
USAGE
htri_t H5S_is_simple(sdim)
H5S_t *sdim; IN: Pointer to dataspace object to query
RETURNS
TRUE/FALSE/FAIL
DESCRIPTION
This function determines the if a dataspace is "simple". ie. if it
has orthogonal, evenly spaced dimensions.
--------------------------------------------------------------------------*/
static htri_t
H5S_is_simple(const H5S_t *sdim)
{
htri_t ret_value;
FUNC_ENTER_NOAPI_NOINIT_NOERR
/* Check args and all the boring stuff. */
HDassert(sdim);
/* H5S_NULL shouldn't be simple dataspace */
ret_value = (H5S_GET_EXTENT_TYPE(sdim) == H5S_SIMPLE ||
H5S_GET_EXTENT_TYPE(sdim) == H5S_SCALAR) ? TRUE : FALSE;
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5S_is_simple() */
/*--------------------------------------------------------------------------
NAME
H5Sis_simple
PURPOSE
Check if a dataspace is simple
USAGE
htri_t H5Sis_simple(space_id)
hid_t space_id; IN: ID of dataspace object to query
RETURNS
TRUE/FALSE/FAIL
DESCRIPTION
This function determines the if a dataspace is "simple". ie. if it
has orthogonal, evenly spaced dimensions.
--------------------------------------------------------------------------*/
htri_t
H5Sis_simple(hid_t space_id)
{
H5S_t *space; /* dataspace to modify */
htri_t ret_value;
FUNC_ENTER_API(FAIL)
H5TRACE1("t", "i", space_id);
/* Check args and all the boring stuff. */
if ((space = (H5S_t *)H5I_object_verify(space_id,H5I_DATASPACE)) == NULL)
HGOTO_ERROR(H5E_ATOM, H5E_BADATOM, FAIL, "not a dataspace")
ret_value = H5S_is_simple(space);
done:
FUNC_LEAVE_API(ret_value)
}
/*--------------------------------------------------------------------------
NAME
H5Sset_extent_simple
PURPOSE
Sets the size of a simple dataspace
USAGE
herr_t H5Sset_extent_simple(space_id, rank, dims, max)
hid_t space_id; IN: Dataspace object to query
int rank; IN: # of dimensions for the dataspace
const size_t *dims; IN: Size of each dimension for the dataspace
const size_t *max; IN: Maximum size of each dimension for the
dataspace
RETURNS
Non-negative on success/Negative on failure
DESCRIPTION
This function sets the number and size of each dimension in the
dataspace. Setting RANK to a value of zero converts the dataspace to a
scalar dataspace. Dimensions are specified from slowest to fastest
changing in the DIMS array (i.e. 'C' order). Setting the size of a
dimension in the MAX array to zero indicates that the dimension is of
unlimited size and should be allowed to expand. If MAX is NULL, the
dimensions in the DIMS array are used as the maximum dimensions.
Currently, only the first dimension in the array (the slowest) may be
unlimited in size.
MODIFICATION
A null dataspace cannot be created from simple space with this function.
Christian Chilan 01/17/2007
Verifies that each element of DIMS is not equal to H5S_UNLIMITED.
Raymond Lu 03/30/2011
We allow 0 dimension size for non-unlimited dimension starting from 1.8.7
release.
--------------------------------------------------------------------------*/
herr_t
H5Sset_extent_simple(hid_t space_id, int rank, const hsize_t dims[/*rank*/],
const hsize_t max[/*rank*/])
{
H5S_t *space; /* dataspace to modify */
int u; /* local counting variable */
herr_t ret_value=SUCCEED; /* Return value */
FUNC_ENTER_API(FAIL)
H5TRACE4("e", "iIs*[a1]h*[a1]h", space_id, rank, dims, max);
/* Check args */
if ((space = (H5S_t *)H5I_object_verify(space_id,H5I_DATASPACE)) == NULL)
HGOTO_ERROR(H5E_ATOM, H5E_BADATOM, FAIL, "not a dataspace")
if (rank > 0 && dims == NULL)
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "no dimensions specified")
if (rank<0 || rank>H5S_MAX_RANK)
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "invalid rank")
if (dims) {
for (u=0; u<rank; u++) {
if (H5S_UNLIMITED==dims[u])
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "current dimension must have a specific size, not H5S_UNLIMITED")
}
}
if (max!=NULL) {
if(dims==NULL)
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "maximum dimension specified, but no current dimensions specified")
for (u=0; u<rank; u++) {
if (max[u]!=H5S_UNLIMITED && max[u]<dims[u])
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "invalid maximum dimension size")
}
}
/* Do it */
if (H5S_set_extent_simple(space, (unsigned)rank, dims, max)<0)
HGOTO_ERROR(H5E_DATASPACE, H5E_CANTINIT, FAIL, "unable to set simple extent")
done:
FUNC_LEAVE_API(ret_value)
}
/*-------------------------------------------------------------------------
* Function: H5S_set_extent_simple
*
* Purpose: This is where the real work happens for
* H5Sset_extent_simple().
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Robb Matzke (copied from H5Sset_extent_simple)
* Wednesday, July 8, 1998
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
static herr_t
H5S_set_extent_simple(H5S_t *space, unsigned rank, const hsize_t *dims,
const hsize_t *max)
{
unsigned u; /* Local index variable */
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_NOAPI_NOINIT
/* Check args */
HDassert(rank <= H5S_MAX_RANK);
HDassert(0 == rank || dims);
/* shift out of the previous state to a "simple" dataspace. */
if(H5S_extent_release(&space->extent) < 0)
HGOTO_ERROR(H5E_RESOURCE, H5E_CANTFREE, FAIL, "failed to release previous dataspace extent")
if(rank == 0) { /* scalar variable */
space->extent.type = H5S_SCALAR;
space->extent.nelem = 1;
space->extent.rank = 0; /* set to scalar rank */
} /* end if */
else {
hsize_t nelem; /* Number of elements in extent */
space->extent.type = H5S_SIMPLE;
/* Set the rank and allocate space for the dims */
space->extent.rank = rank;
space->extent.size = (hsize_t *)H5FL_ARR_MALLOC(hsize_t, (size_t)rank);
/* Copy the dimensions & compute the number of elements in the extent */
for(u = 0, nelem = 1; u < space->extent.rank; u++) {
space->extent.size[u] = dims[u];
nelem *= dims[u];
} /* end for */
space->extent.nelem = nelem;
/* Copy the maximum dimensions if specified. Otherwise, the maximal dimensions are the
* same as the dimension */
space->extent.max = (hsize_t *)H5FL_ARR_MALLOC(hsize_t, (size_t)rank);
if(max != NULL) {
HDmemcpy(space->extent.max, max, sizeof(hsize_t) * rank);
} else {
for(u = 0; u < space->extent.rank; u++)
space->extent.max[u] = dims[u];
}
} /* end else */
/* Selection related cleanup */
/* Set offset to zeros */
for(u = 0; u < space->extent.rank; u++)
space->select.offset[u] = 0;
space->select.offset_changed = FALSE;
/* If the selection is 'all', update the number of elements selected */
if(H5S_GET_SELECT_TYPE(space) == H5S_SEL_ALL)
if(H5S_select_all(space, FALSE) < 0)
HGOTO_ERROR(H5E_DATASPACE, H5E_CANTDELETE, FAIL, "can't change selection")
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* H5S_set_extent_simple() */
/*-------------------------------------------------------------------------
* Function: H5Screate_simple
*
* Purpose: Creates a new simple dataspace object and opens it for
* access. The DIMS argument is the size of the simple dataset
* and the MAXDIMS argument is the upper limit on the size of
* the dataset. MAXDIMS may be the null pointer in which case
* the upper limit is the same as DIMS. If an element of
* MAXDIMS is H5S_UNLIMITED then the corresponding dimension is
* unlimited, otherwise no element of MAXDIMS should be smaller
* than the corresponding element of DIMS.
*
* Return: Success: The ID for the new simple dataspace object.
*
* Failure: Negative
*
* Programmer: Quincey Koziol
* Tuesday, January 27, 1998
*
* Modification:
* Raymond Lu 03/30/2011
* We allow 0-dimension for non-unlimited dimension starting
* from 1.8.7 release.
*
*-------------------------------------------------------------------------
*/
hid_t
H5Screate_simple(int rank, const hsize_t dims[/*rank*/],
const hsize_t maxdims[/*rank*/])
{
H5S_t *space = NULL;
int i;
hid_t ret_value;
FUNC_ENTER_API(FAIL)
H5TRACE3("i", "Is*[a0]h*[a0]h", rank, dims, maxdims);
/* Check arguments */
if(rank < 0)
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "dimensionality cannot be negative")
if(rank > H5S_MAX_RANK)
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "dimensionality is too large")
/* We allow users to use this function to create scalar or null dataspace.
* Check DIMS isn't set when the RANK is 0.
*/
if(!dims && rank != 0)
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "invalid dataspace information")
/* Check whether the current dimensions are valid */
for(i = 0; i < rank; i++) {
if(H5S_UNLIMITED == dims[i])
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "current dimension must have a specific size, not H5S_UNLIMITED")
if(maxdims && H5S_UNLIMITED != maxdims[i] && maxdims[i]<dims[i])
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "maxdims is smaller than dims")
} /* end for */
/* Create the space and set the extent */
if(NULL == (space = H5S_create_simple((unsigned)rank,dims,maxdims)))
HGOTO_ERROR(H5E_DATASPACE, H5E_CANTCREATE, FAIL, "can't create simple dataspace")
/* Atomize */
if((ret_value = H5I_register (H5I_DATASPACE, space, TRUE)) < 0)
HGOTO_ERROR(H5E_ATOM, H5E_CANTREGISTER, FAIL, "unable to register dataspace ID")
done:
if(ret_value < 0) {
if(space && H5S_close(space) < 0)
HDONE_ERROR(H5E_DATASPACE, H5E_CANTRELEASE, FAIL, "unable to release dataspace")
} /* end if */
FUNC_LEAVE_API(ret_value)
} /* end H5Screate_simple() */
/*-------------------------------------------------------------------------
* Function: H5S_create_simple
*
* Purpose: Internal function to create simple dataspace
*
* Return: Success: The ID for the new simple dataspace object.
* Failure: Negative
*
* Errors:
*
* Programmer: Quincey Koziol
* Thursday, April 3, 2003
*
* Modifications:
* Extracted from H5Screate_simple
* Quincey Koziol, Thursday, April 3, 2003
*
*-------------------------------------------------------------------------
*/
H5S_t *
H5S_create_simple(unsigned rank, const hsize_t dims[/*rank*/],
const hsize_t maxdims[/*rank*/])
{
H5S_t *ret_value; /* Return value */
FUNC_ENTER_NOAPI(NULL)
/* Check arguments */
assert(rank <=H5S_MAX_RANK);
/* Create the space and set the extent */
if(NULL==(ret_value=H5S_create(H5S_SIMPLE)))
HGOTO_ERROR(H5E_DATASPACE, H5E_CANTCREATE, NULL, "can't create simple dataspace")
if(H5S_set_extent_simple(ret_value,rank,dims,maxdims)<0)
HGOTO_ERROR(H5E_DATASPACE, H5E_CANTINIT, NULL, "can't set dimensions")
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5S_create_simple() */
/*-------------------------------------------------------------------------
* Function: H5Sencode
*
* Purpose: Given a dataspace ID, converts the object description
* (including selection) into binary in a buffer.
*
* Return: Success: non-negative
*
* Failure: negative
*
* Programmer: Raymond Lu
* slu@ncsa.uiuc.edu
* July 14, 2004
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
herr_t
H5Sencode(hid_t obj_id, void *buf, size_t *nalloc)
{
H5S_t *dspace;
herr_t ret_value=SUCCEED;
FUNC_ENTER_API(FAIL)
H5TRACE3("e", "i*x*z", obj_id, buf, nalloc);
/* Check argument and retrieve object */
if (NULL==(dspace=(H5S_t *)H5I_object_verify(obj_id, H5I_DATASPACE)))
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a dataspace")
if(H5S_encode(dspace, (unsigned char *)buf, nalloc)<0)
HGOTO_ERROR(H5E_DATATYPE, H5E_CANTENCODE, FAIL, "can't encode datatype")
done:
FUNC_LEAVE_API(ret_value)
}
/*-------------------------------------------------------------------------
* Function: H5S_encode
*
* Purpose: Private function for H5Sencode. Converts an object
* description for dataspace and its selection into binary
* in a buffer.
*
* Return: Success: non-negative
* Failure: negative
*
* Programmer: Raymond Lu
* slu@ncsa.uiuc.edu
* July 14, 2004
*
*-------------------------------------------------------------------------
*/
static herr_t
H5S_encode(H5S_t *obj, unsigned char *buf, size_t *nalloc)
{
size_t extent_size; /* Size of serialized dataspace extent */
hssize_t sselect_size; /* Signed size of serialized dataspace selection */
size_t select_size; /* Size of serialized dataspace selection */
H5F_t *f = NULL; /* Fake file structure*/
herr_t ret_value = SUCCEED;
FUNC_ENTER_NOAPI_NOINIT
/* Allocate "fake" file structure */
if(NULL == (f = H5F_fake_alloc((uint8_t)0)))
HGOTO_ERROR(H5E_DATASPACE, H5E_CANTALLOC, FAIL, "can't allocate fake file struct")
/* Find out the size of buffer needed for extent */
if((extent_size = H5O_msg_raw_size(f, H5O_SDSPACE_ID, TRUE, obj)) == 0)
HGOTO_ERROR(H5E_DATASPACE, H5E_BADSIZE, FAIL, "can't find dataspace size")
/* Find out the size of buffer needed for selection */
if((sselect_size = H5S_SELECT_SERIAL_SIZE(obj)) < 0)
HGOTO_ERROR(H5E_DATASPACE, H5E_BADSIZE, FAIL, "can't find dataspace selection size")
H5_ASSIGN_OVERFLOW(select_size, sselect_size, hssize_t, size_t);
/* Verify the size of buffer. If it's not big enough, simply return the
* right size without filling the buffer. */
if(!buf || *nalloc < (extent_size + select_size + 1 + 1 + 1 + 4))
*nalloc = extent_size + select_size + 1 + 1 + 1 + 4;
else {
/* Encode the type of the information */
*buf++ = H5O_SDSPACE_ID;
/* Encode the version of the dataspace information */
*buf++ = H5S_ENCODE_VERSION;
/* Encode the "size of size" information */
*buf++ = (unsigned char)H5F_SIZEOF_SIZE(f);
/* Encode size of extent information. Pointer is actually moved in this macro. */
UINT32ENCODE(buf, extent_size);
/* Encode the extent part of dataspace */
if(H5O_msg_encode(f, H5O_SDSPACE_ID, TRUE, buf, obj) < 0)
HGOTO_ERROR(H5E_DATASPACE, H5E_CANTENCODE, FAIL, "can't encode extent space")
buf += extent_size;
/* Encode the selection part of dataspace. */
if(H5S_SELECT_SERIALIZE(obj, buf) < 0)
HGOTO_ERROR(H5E_DATASPACE, H5E_CANTENCODE, FAIL, "can't encode select space")
} /* end else */
done:
/* Release fake file structure */
if(f && H5F_fake_free(f) < 0)
HDONE_ERROR(H5E_DATASPACE, H5E_CANTRELEASE, FAIL, "unable to release fake file struct")
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5S_encode() */
/*-------------------------------------------------------------------------
* Function: H5Sdecode
*
* Purpose: Decode a binary object description of dataspace and
* return a new object handle.
*
* Return: Success: dataspace ID(non-negative)
*
* Failure: negative
*
* Programmer: Raymond Lu
* slu@ncsa.uiuc.edu
* July 14, 2004
*
*-------------------------------------------------------------------------
*/
hid_t
H5Sdecode(const void *buf)
{
H5S_t *ds;
hid_t ret_value;
FUNC_ENTER_API(FAIL)
H5TRACE1("i", "*x", buf);
if(buf == NULL)
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "empty buffer")
if((ds = H5S_decode((const unsigned char *)buf)) == NULL)
HGOTO_ERROR(H5E_DATASPACE, H5E_CANTDECODE, FAIL, "can't decode object")
/* Register the type and return the ID */
if((ret_value = H5I_register(H5I_DATASPACE, ds, TRUE)) < 0)
HGOTO_ERROR(H5E_DATASPACE, H5E_CANTREGISTER, FAIL, "unable to register dataspace")
done:
FUNC_LEAVE_API(ret_value)
} /* end H5Sdecode() */
/*-------------------------------------------------------------------------
* Function: H5S_decode
*
* Purpose: Private function for H5Sdecode. Reconstructs a binary
* description of dataspace and returns a new object handle.
*
* Return: Success: dataspace ID(non-negative)
*
* Failure: negative
*
* Programmer: Raymond Lu
* slu@ncsa.uiuc.edu
* July 14, 2004
*
*-------------------------------------------------------------------------
*/
static H5S_t*
H5S_decode(const unsigned char *buf)
{
H5S_t *ds;
H5S_extent_t *extent;
size_t extent_size; /* size of the extent message*/
H5F_t *f = NULL; /* Fake file structure*/
uint8_t sizeof_size; /* 'Size of sizes' for file */
H5S_t *ret_value;
FUNC_ENTER_NOAPI_NOINIT
/* Decode the type of the information */
if(*buf++ != H5O_SDSPACE_ID)
HGOTO_ERROR(H5E_DATASPACE, H5E_BADMESG, NULL, "not an encoded dataspace")
/* Decode the version of the dataspace information */
if(*buf++ != H5S_ENCODE_VERSION)
HGOTO_ERROR(H5E_DATASPACE, H5E_VERSION, NULL, "unknown version of encoded dataspace")
/* Decode the "size of size" information */
sizeof_size = *buf++;
/* Allocate "fake" file structure */
if(NULL == (f = H5F_fake_alloc(sizeof_size)))
HGOTO_ERROR(H5E_DATASPACE, H5E_CANTALLOC, NULL, "can't allocate fake file struct")
/* Decode size of extent information */
UINT32DECODE(buf, extent_size);
/* Decode the extent part of dataspace */
/* (pass mostly bogus file pointer and bogus DXPL) */
if((extent = (H5S_extent_t *)H5O_msg_decode(f, H5P_DEFAULT, NULL, H5O_SDSPACE_ID, buf))==NULL)
HGOTO_ERROR(H5E_DATASPACE, H5E_CANTDECODE, NULL, "can't decode object")
buf += extent_size;
/* Copy the extent into dataspace structure */
if((ds = H5FL_CALLOC(H5S_t))==NULL)
HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, NULL, "memory allocation failed for dataspace conversion path table")
if(H5O_msg_copy(H5O_SDSPACE_ID, extent, &(ds->extent)) == NULL)
HGOTO_ERROR(H5E_DATASPACE, H5E_CANTCOPY, NULL, "can't copy object")
if(H5S_extent_release(extent) < 0)
HGOTO_ERROR(H5E_RESOURCE, H5E_CANTDELETE, NULL, "can't release previous dataspace")
extent = H5FL_FREE(H5S_extent_t, extent);
/* Initialize to "all" selection. Deserialization relies on valid existing selection. */
if(H5S_select_all(ds, FALSE) < 0)
HGOTO_ERROR(H5E_DATASPACE, H5E_CANTSET, NULL, "unable to set all selection")
/* Decode the select part of dataspace. I believe this part always exists. */
if(H5S_SELECT_DESERIALIZE(ds, buf) < 0)
HGOTO_ERROR(H5E_DATASPACE, H5E_CANTDECODE, NULL, "can't decode space selection")
/* Set return value */
ret_value = ds;
done:
/* Release fake file structure */
if(f && H5F_fake_free(f) < 0)
HDONE_ERROR(H5E_DATASPACE, H5E_CANTRELEASE, NULL, "unable to release fake file struct")
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5S_decode() */
/*-------------------------------------------------------------------------
* Function: H5S_get_simple_extent_type
*
* Purpose: Internal function for retrieving the type of extent for a dataspace object
*
* Return: Success: The class of the dataspace object
*
* Failure: N5S_NO_CLASS
*
* Errors:
*
* Programmer: Quincey Koziol
* Thursday, September 28, 2000
*
* Note: This routine participates in the "Inlining C function pointers"
* pattern, don't call it directly, use the appropriate macro
* defined in H5Sprivate.h.
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
H5S_class_t
H5S_get_simple_extent_type(const H5S_t *space)
{
H5S_class_t ret_value;
FUNC_ENTER_NOAPI(H5S_NO_CLASS)
assert(space);
ret_value=H5S_GET_EXTENT_TYPE(space);
done:
FUNC_LEAVE_NOAPI(ret_value)
}
/*-------------------------------------------------------------------------
* Function: H5Sget_simple_extent_type
*
* Purpose: Retrieves the type of extent for a dataspace object
*
* Return: Success: The class of the dataspace object
*
* Failure: N5S_NO_CLASS
*
* Errors:
*
* Programmer: Quincey Koziol
* Thursday, July 23, 1998
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
H5S_class_t
H5Sget_simple_extent_type(hid_t sid)
{
H5S_t *space;
H5S_class_t ret_value;
FUNC_ENTER_API(H5S_NO_CLASS)
H5TRACE1("Sc", "i", sid);
/* Check arguments */
if (NULL == (space = (H5S_t *)H5I_object_verify(sid, H5I_DATASPACE)))
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, H5S_NO_CLASS, "not a dataspace")
ret_value=H5S_GET_EXTENT_TYPE(space);
done:
FUNC_LEAVE_API(ret_value)
}
/*--------------------------------------------------------------------------
NAME
H5Sset_extent_none
PURPOSE
Resets the extent of a dataspace back to "none"
USAGE
herr_t H5Sset_extent_none(space_id)
hid_t space_id; IN: Dataspace object to reset
RETURNS
Non-negative on success/Negative on failure
DESCRIPTION
This function resets the type of a dataspace back to "none" with no
extent information stored for the dataspace.
--------------------------------------------------------------------------*/
herr_t
H5Sset_extent_none(hid_t space_id)
{
H5S_t *space; /* dataspace to modify */
herr_t ret_value=SUCCEED; /* Return value */
FUNC_ENTER_API(FAIL)
H5TRACE1("e", "i", space_id);
/* Check args */
if (NULL == (space = (H5S_t *)H5I_object_verify(space_id, H5I_DATASPACE)))
HGOTO_ERROR(H5E_ATOM, H5E_BADATOM, FAIL, "not a dataspace")
/* Clear the previous extent from the dataspace */
if(H5S_extent_release(&space->extent)<0)
HGOTO_ERROR(H5E_RESOURCE, H5E_CANTDELETE, FAIL, "can't release previous dataspace")
space->extent.type=H5S_NO_CLASS;
done:
FUNC_LEAVE_API(ret_value)
} /* end H5Sset_extent_none() */
/*--------------------------------------------------------------------------
NAME
H5Soffset_simple
PURPOSE
Changes the offset of a selection within a simple dataspace extent
USAGE
herr_t H5Soffset_simple(space_id, offset)
hid_t space_id; IN: Dataspace object to reset
const hssize_t *offset; IN: Offset to position the selection at
RETURNS
Non-negative on success/Negative on failure
DESCRIPTION
This function creates an offset for the selection within an extent, allowing
the same shaped selection to be moved to different locations within a
dataspace without requiring it to be re-defined.
--------------------------------------------------------------------------*/
herr_t
H5Soffset_simple(hid_t space_id, const hssize_t *offset)
{
H5S_t *space; /* dataspace to modify */
herr_t ret_value=SUCCEED; /* Return value */
FUNC_ENTER_API(FAIL)
H5TRACE2("e", "i*Hs", space_id, offset);
/* Check args */
if (NULL == (space = (H5S_t *)H5I_object_verify(space_id, H5I_DATASPACE)))
HGOTO_ERROR(H5E_ATOM, H5E_BADATOM, FAIL, "not a dataspace")
if (space->extent.rank==0 || (H5S_GET_EXTENT_TYPE(space)==H5S_SCALAR
|| H5S_GET_EXTENT_TYPE(space)==H5S_NULL))
HGOTO_ERROR(H5E_ATOM, H5E_UNSUPPORTED, FAIL, "can't set offset on scalar or null dataspace")
if (offset == NULL)
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "no offset specified")
/* Set the selection offset */
if(H5S_select_offset(space,offset)<0)
HGOTO_ERROR(H5E_DATASPACE, H5E_CANTINIT, FAIL, "can't set offset")
done:
FUNC_LEAVE_API(ret_value)
} /* end H5Soffset_simple() */
/*-------------------------------------------------------------------------
* Function: H5S_set_extent
*
* Purpose: Modify the dimensions of a dataspace. Based on H5S_extend
*
* Return: Success: Non-negative
* Failure: Negative
*
* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
* March 13, 2002
*
*-------------------------------------------------------------------------
*/
htri_t
H5S_set_extent(H5S_t *space, const hsize_t *size)
{
unsigned u; /* Local index variable */
htri_t ret_value = FALSE; /* Return value */
FUNC_ENTER_NOAPI(FAIL)
/* Check args */
HDassert(space && H5S_SIMPLE == H5S_GET_EXTENT_TYPE(space));
HDassert(size);
/* Verify that the dimensions being changed are allowed to change */
for(u = 0; u < space->extent.rank; u++) {
if(space->extent.size[u] != size[u]) {
/* Check for invalid dimension size modification */
if(space->extent.max && H5S_UNLIMITED != space->extent.max[u] &&
space->extent.max[u] < size[u])
HGOTO_ERROR(H5E_DATASPACE, H5E_BADVALUE, FAIL, "dimension cannot exceed the existing maximal size (new: %llu max: %llu)", (unsigned long long)size[u], (unsigned long long)space->extent.max[u])
/* Indicate that dimension size can be modified */
ret_value = TRUE;
} /* end if */
} /* end for */
/* Update dimension size(s) */
if(ret_value)
if(H5S_set_extent_real(space, size) < 0)
HGOTO_ERROR(H5E_DATASPACE, H5E_CANTSET, FAIL, "failed to change dimension size(s)")
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5S_set_extent() */
/*-------------------------------------------------------------------------
* Function: H5S_has_extent
*
* Purpose: Determines if a simple dataspace's extent has been set (e.g.,
* by H5Sset_extent_simple() ). Helps avoid write errors.
*
* Return: TRUE if dataspace has extent set
* FALSE if dataspace's extent is uninitialized
*
* Programmer: James Laird
*
* Date: July 23, 2004
*
*-------------------------------------------------------------------------
*/
hbool_t
H5S_has_extent(const H5S_t *ds)
{
hbool_t ret_value;
FUNC_ENTER_NOAPI_NOINIT_NOERR
HDassert(ds);
if(0 == ds->extent.rank && 0 == ds->extent.nelem && H5S_NULL != ds->extent.type)
ret_value = FALSE;
else
ret_value = TRUE;
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5S_has_extent() */
/*-------------------------------------------------------------------------
* Function: H5S_set_extent_real
*
* Purpose: Modify the dimensions of a dataspace. Based on H5S_extend
*
* Return: Success: Non-negative
* Failure: Negative
*
* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
* March 13, 2002
*
*-------------------------------------------------------------------------
*/
herr_t
H5S_set_extent_real(H5S_t *space, const hsize_t *size)
{
hsize_t nelem; /* Number of elements in extent */
unsigned u; /* Local index variable */
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_NOAPI(FAIL)
/* Check args */
HDassert(space && H5S_SIMPLE == H5S_GET_EXTENT_TYPE(space));
HDassert(size);
/* Change the dataspace size & re-compute the number of elements in the extent */
for(u = 0, nelem = 1; u < space->extent.rank; u++ ) {
space->extent.size[u] = size[u];
nelem *= size[u];
} /* end for */
space->extent.nelem = nelem;
/* If the selection is 'all', update the number of elements selected */
if(H5S_SEL_ALL == H5S_GET_SELECT_TYPE(space))
if(H5S_select_all(space, FALSE) < 0)
HGOTO_ERROR(H5E_DATASPACE, H5E_CANTDELETE, FAIL, "can't change selection")
/* Mark the dataspace as no longer shared if it was before */
if(H5O_msg_reset_share(H5O_SDSPACE_ID, space) < 0)
HGOTO_ERROR(H5E_DATASPACE, H5E_CANTRESET, FAIL, "can't stop sharing dataspace")
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5S_set_extent_real() */
/*-------------------------------------------------------------------------
* Function: H5Sextent_equal
*
* Purpose: Determines if two dataspace extents are equal.
*
* Return: Success: TRUE if equal, FALSE if unequal
*
* Failure: Negative
*
* Programmer: Quincey Koziol
* Monday, October 24, 2005
*
*-------------------------------------------------------------------------
*/
htri_t
H5Sextent_equal(hid_t space1_id, hid_t space2_id)
{
const H5S_t *ds1, *ds2; /* Dataspaces to compare */
htri_t ret_value;
FUNC_ENTER_API(FAIL)
H5TRACE2("t", "ii", space1_id, space2_id);
/* check args */
if(NULL == (ds1 = (const H5S_t *)H5I_object_verify(space1_id, H5I_DATASPACE)) ||
NULL == (ds2 = (const H5S_t *)H5I_object_verify(space2_id, H5I_DATASPACE)))
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a dataspace")
/* Check dataspaces for extent's equality */
if((ret_value = H5S_extent_equal(ds1, ds2)) < 0)
HGOTO_ERROR(H5E_DATASPACE, H5E_CANTCOMPARE, FAIL, "dataspace comparison failed")
done:
FUNC_LEAVE_API(ret_value)
} /* end H5Sextent_equal() */
/*--------------------------------------------------------------------------
NAME
H5S_extent_equal
PURPOSE
Check if two dataspaces have equal extents
USAGE
htri_t H5S_extent_equal(ds1, ds2)
H5S_t *ds1, *ds2; IN: Dataspace objects to compare
RETURNS
TRUE if equal, FALSE if unequal on succeess/Negative on failure
DESCRIPTION
Compare two dataspaces if their extents are identical.
--------------------------------------------------------------------------*/
htri_t
H5S_extent_equal(const H5S_t *ds1, const H5S_t *ds2)
{
unsigned u; /* Local index variable */
htri_t ret_value = TRUE; /* Return value */
FUNC_ENTER_NOAPI_NOINIT_NOERR
/* Check args */
HDassert(ds1);
HDassert(ds2);
/* Make certain the dataspaces are the same type */
if(ds1->extent.type != ds2->extent.type)
HGOTO_DONE(FALSE)
/* Make certain the dataspaces are the same rank */
if(ds1->extent.rank != ds2->extent.rank)
HGOTO_DONE(FALSE)
/* Make certain the dataspaces' current dimensions are the same size */
if(ds1->extent.rank > 0) {
HDassert(ds1->extent.size);
HDassert(ds2->extent.size);
for(u = 0; u < ds1->extent.rank; u++)
if(ds1->extent.size[u] != ds2->extent.size[u])
HGOTO_DONE(FALSE)
} /* end if */
/* Make certain the dataspaces' maximum dimensions are the same size */
if(ds1->extent.rank > 0) {
/* Check for no maximum dimensions on dataspaces */
if(ds1->extent.max != NULL && ds2->extent.max != NULL) {
for(u = 0; u < ds1->extent.rank; u++)
if(ds1->extent.max[u] != ds2->extent.max[u])
HGOTO_DONE(FALSE)
} /* end if */
else
if((ds1->extent.max == NULL && ds2->extent.max != NULL) ||
(ds1->extent.max != NULL && ds2->extent.max == NULL))
HGOTO_DONE(FALSE)
} /* end if */
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5S_extent_equal() */
/*-------------------------------------------------------------------------
* Function: H5S_extent_nelem
*
* Purpose: Determines how many elements a dataset extent describes.
*
* Return: Success: Number of data points in the dataset extent.
* Failure: negative
*
* Programmer: Quincey Koziol
* Thursday, November 30, 2006
*
*-------------------------------------------------------------------------
*/
hsize_t
H5S_extent_nelem(const H5S_extent_t *ext)
{
FUNC_ENTER_NOAPI_NOINIT_NOERR
/* check args */
HDassert(ext);
/* Return the number of elements in extent */
FUNC_LEAVE_NOAPI(ext->nelem)
} /* end H5S_extent_nelem() */
/*-------------------------------------------------------------------------
* Function: H5S_set_latest_version
*
* Purpose: Set the encoding for a dataspace to the latest version.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Quincey Koziol
* Tuesday, July 24, 2007
*
*-------------------------------------------------------------------------
*/
herr_t
H5S_set_latest_version(H5S_t *ds)
{
FUNC_ENTER_NOAPI_NOINIT_NOERR
/* Sanity check */
HDassert(ds);
/* Set encoding of extent to latest version */
ds->extent.version = H5O_SDSPACE_VERSION_LATEST;
FUNC_LEAVE_NOAPI(SUCCEED)
} /* end H5S_set_latest_version() */
#ifndef H5_NO_DEPRECATED_SYMBOLS
/*-------------------------------------------------------------------------
* Function: H5S_extend
*
* Purpose: Extend the dimensions of a dataspace.
*
* Return: Success: Number of dimensions whose size increased.
*
* Failure: Negative
*
* Programmer: Robb Matzke
* Friday, January 30, 1998
*
*-------------------------------------------------------------------------
*/
int
H5S_extend(H5S_t *space, const hsize_t *size)
{
unsigned u;
int ret_value = 0;
FUNC_ENTER_NOAPI(FAIL)
/* Check args */
HDassert(space && H5S_SIMPLE == H5S_GET_EXTENT_TYPE(space));
HDassert(size);
/* Check through all the dimensions to see if modifying the dataspace is allowed */
for(u = 0; u < space->extent.rank; u++) {
if(space->extent.size[u]<size[u]) {
if(space->extent.max && H5S_UNLIMITED!=space->extent.max[u] &&
space->extent.max[u]<size[u])
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "dimension cannot be increased")
ret_value++;
} /* end if */
} /* end for */
/* Update */
if(ret_value) {
hsize_t nelem; /* Number of elements in extent */
/* Change the dataspace size & re-compute the number of elements in the extent */
for(u = 0, nelem = 1; u < space->extent.rank; u++) {
if(space->extent.size[u] < size[u])
space->extent.size[u] = size[u];
nelem *= space->extent.size[u];
} /* end for */
space->extent.nelem = nelem;
/* If the selection is 'all', update the number of elements selected */
if(H5S_GET_SELECT_TYPE(space) == H5S_SEL_ALL)
if(H5S_select_all(space, FALSE) < 0)
HGOTO_ERROR(H5E_DATASPACE, H5E_CANTDELETE, FAIL, "can't change selection")
/* Mark the dataspace as no longer shared if it was before */
if(H5O_msg_reset_share(H5O_SDSPACE_ID, space) < 0)
HGOTO_ERROR(H5E_DATASPACE, H5E_CANTRESET, FAIL, "can't stop sharing dataspace")
} /* end if */
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5S_extend() */
#endif /* H5_NO_DEPRECATED_SYMBOLS */
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