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hdf5/tools/h5copy/CMakeLists.txt
Allen Byrne 3723a9591e [svn-r22033] Remove unnecessary INCLUDE_DIR command 
Tested: local linux and windows
2012-03-07 09:39:38 -05:00

385 lines
18 KiB
CMake
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cmake_minimum_required (VERSION 2.8.6)
PROJECT (HDF5_TOOLS_H5COPY)
#-----------------------------------------------------------------------------
# Setup include Directories
#-----------------------------------------------------------------------------
INCLUDE_DIRECTORIES (${HDF5_TOOLS_SRC_DIR}/lib)
# --------------------------------------------------------------------
# Add the h5copy and test executables
# --------------------------------------------------------------------
ADD_EXECUTABLE (h5copy ${HDF5_TOOLS_H5COPY_SOURCE_DIR}/h5copy.c)
TARGET_NAMING (h5copy ${LIB_TYPE})
TARGET_LINK_LIBRARIES (h5copy ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET})
SET_TARGET_PROPERTIES (h5copy PROPERTIES FOLDER tools)
SET (H5_DEP_EXECUTABLES h5copy)
##############################################################################
##############################################################################
### T E S T I N G ###
##############################################################################
##############################################################################
IF (BUILD_TESTING)
IF (HDF5_BUILD_GENERATORS AND NOT BUILD_SHARED_LIBS)
ADD_EXECUTABLE (h5copygentest ${HDF5_TOOLS_H5COPY_SOURCE_DIR}/h5copygentest.c)
TARGET_NAMING (h5copygentest ${LIB_TYPE})
TARGET_LINK_LIBRARIES (h5copygentest ${HDF5_LIB_TARGET})
SET_TARGET_PROPERTIES (h5copygentest PROPERTIES FOLDER generator/tools)
#ADD_TEST (NAME h5copygentest COMMAND $<TARGET_FILE:h5copygentest>)
ENDIF (HDF5_BUILD_GENERATORS AND NOT BUILD_SHARED_LIBS)
# --------------------------------------------------------------------
# Copy all the HDF5 files from the source directory into the test directory
# --------------------------------------------------------------------
SET (LIST_HDF5_TEST_FILES
${HDF5_TOOLS_H5COPY_SOURCE_DIR}/testfiles/h5copy_extlinks_src.h5
${HDF5_TOOLS_H5COPY_SOURCE_DIR}/testfiles/h5copy_extlinks_trg.h5
${HDF5_TOOLS_H5COPY_SOURCE_DIR}/testfiles/h5copy_ref.h5
${HDF5_TOOLS_H5COPY_SOURCE_DIR}/testfiles/h5copytst.h5
)
SET (LIST_OTHER_TEST_FILES
${HDF5_TOOLS_H5COPY_SOURCE_DIR}/testfiles/h5copy_misc1.out
${HDF5_TOOLS_H5COPY_SOURCE_DIR}/testfiles/h5copy_extlinks_src.out.ls
${HDF5_TOOLS_H5COPY_SOURCE_DIR}/testfiles/h5copy_ref.out.ls
${HDF5_TOOLS_H5COPY_SOURCE_DIR}/testfiles/h5copytst.out.ls
)
FILE (MAKE_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles")
FOREACH (listfiles ${LIST_HDF5_TEST_FILES} ${LIST_OTHER_TEST_FILES})
GET_FILENAME_COMPONENT(fname "${listfiles}" NAME)
SET (dest "${PROJECT_BINARY_DIR}/testfiles/${fname}")
#MESSAGE (STATUS " Copying ${listfiles}")
ADD_CUSTOM_COMMAND (
TARGET h5copy
POST_BUILD
COMMAND ${CMAKE_COMMAND}
ARGS -E copy_if_different ${listfiles} ${dest}
)
ENDFOREACH (listfiles ${LIST_HDF5_TEST_FILES} ${LIST_OTHER_TEST_FILES})
#
# This section can be removed, but leave here for a reference later.
# Purpose: '-l3' ignores top 3 lines when copy text file.
#
#FOREACH (listfiles ${LIST_OTHER_TEST_FILES})
# SET (lsdest "${PROJECT_BINARY_DIR}/testfiles/${listfiles}")
# ADD_CUSTOM_COMMAND (
# TARGET h5copy
# POST_BUILD
# COMMAND ${XLATE_UTILITY}
# ARGS ${HDF5_TOOLS_H5COPY_SOURCE_DIR}/testfiles/${listfiles} ${lsdest} -l3
# )
#ENDFOREACH (listfiles ${LIST_OTHER_TEST_FILES})
##############################################################################
##############################################################################
### T H E T E S T S M A C R O S ###
##############################################################################
##############################################################################
#
# Perform h5copy according to passing parmeters
#
MACRO (ADD_H5_F_TEST testname resultcode infile outfile fparam vparam sparam srcname dparam dstname)
ADD_TEST (
NAME H5COPY_F-${testname}
COMMAND $<TARGET_FILE:h5copy> -f ${fparam} -i ./testfiles/${infile} -o ./testfiles/${outfile} ${vparam} ${sparam} ${srcname} ${dparam} ${dstname} ${ARGN}
)
IF (NOT "${last_test}" STREQUAL "")
SET_TESTS_PROPERTIES (H5COPY_F-${testname} PROPERTIES DEPENDS ${last_test})
ENDIF (NOT "${last_test}" STREQUAL "")
SET (last_test "H5COPY_F-${testname}")
ADD_H5_DIFF_TEST (${testname} ${resultcode} ${last_test} ${infile} ${outfile} ${srcname} ${dstname})
ENDMACRO (ADD_H5_F_TEST)
MACRO (ADD_H5_TEST testname resultcode infile outfile vparam sparam srcname dparam dstname)
ADD_TEST (
NAME H5COPY-${testname}
COMMAND $<TARGET_FILE:h5copy> -i ./testfiles/${infile} -o ./testfiles/${outfile} ${vparam} ${sparam} ${srcname} ${dparam} ${dstname} ${ARGN}
)
IF (NOT "${last_test}" STREQUAL "")
SET_TESTS_PROPERTIES (H5COPY-${testname} PROPERTIES DEPENDS ${last_test})
ENDIF (NOT "${last_test}" STREQUAL "")
SET (last_test "H5COPY-${testname}")
ADD_H5_DIFF_TEST (${testname} ${resultcode} ${last_test} ${infile} ${outfile} ${srcname} ${dstname})
ENDMACRO (ADD_H5_TEST)
MACRO (ADD_H5_DIFF_TEST testname resultcode testdepends infile outfile srcname dstname)
# resultcode=2 will cause the test to skip the diff test
IF (NOT ${resultcode} STREQUAL "2")
ADD_TEST (
NAME H5COPY-DIFF_${testname}
COMMAND $<TARGET_FILE:h5diff> -q ./testfiles/${infile} ./testfiles/${outfile} ${srcname} ${dstname}
)
SET_TESTS_PROPERTIES(H5COPY-DIFF_${testname} PROPERTIES DEPENDS ${testdepends})
SET (last_test "H5COPY-DIFF_${testname}")
IF (${resultcode} STREQUAL "1")
SET_TESTS_PROPERTIES (H5COPY-DIFF_${testname} PROPERTIES WILL_FAIL "true")
ENDIF (${resultcode} STREQUAL "1")
ENDIF (NOT ${resultcode} STREQUAL "2")
ENDMACRO (ADD_H5_DIFF_TEST)
#
# Test result with h5ls
#
MACRO (ADD_H5LS_TEST file filetest)
# If using memchecker add tests without using scripts
IF (HDF5_ENABLE_USING_MEMCHECKER)
ADD_TEST (NAME H5COPY-h5ls_${file}-${filetest} COMMAND $<TARGET_FILE:h5ls> -Svr ./testfiles/${file}.out.h5)
ELSE (HDF5_ENABLE_USING_MEMCHECKER)
ADD_TEST (
NAME H5COPY-h5ls_${file}-${filetest}
COMMAND "${CMAKE_COMMAND}"
-D "TEST_PROGRAM=$<TARGET_FILE:h5ls>"
-D "TEST_ARGS=-Svr;./testfiles/${file}.out.h5"
-D "TEST_FOLDER=${PROJECT_BINARY_DIR}"
-D "TEST_OUTPUT=./testfiles/${file}.out.out"
-D "TEST_EXPECT=0"
-D "TEST_REFERENCE=./testfiles/${file}.out.ls"
-D "TEST_MASK=true"
-P "${HDF5_RESOURCES_DIR}/runTest.cmake"
)
ENDIF (HDF5_ENABLE_USING_MEMCHECKER)
IF (NOT "${last_test}" STREQUAL "")
SET_TESTS_PROPERTIES (H5COPY-h5ls_${file}-${filetest} PROPERTIES DEPENDS ${last_test})
ENDIF (NOT "${last_test}" STREQUAL "")
SET (last_test "H5COPY-h5ls_${file}-${filetest}")
ENDMACRO (ADD_H5LS_TEST)
#
# Similiar to ADD_H5_TEST macro. Compare to outputs from source & target
# files instead of checking with h5ls.
#
MACRO (ADD_H5_CMP_TEST testname resultcode infile outfile vparam sparam srcname dparam dstname)
# If using memchecker add tests without using scripts
IF (HDF5_ENABLE_USING_MEMCHECKER)
ADD_TEST (NAME H5COPY-CMP-${testname} COMMAND $<TARGET_FILE:h5copy> -i ./testfiles/${infile} -o ./testfiles/${outfile} ${vparam} ${sparam} ${srcname} ${dparam} ${dstname} ${ARGN})
IF (${resultcode} STREQUAL "1")
SET_TESTS_PROPERTIES (H5COPY-CMP-${testname} PROPERTIES WILL_FAIL "true")
ENDIF (${resultcode} STREQUAL "1")
ELSE (HDF5_ENABLE_USING_MEMCHECKER)
ADD_TEST (
NAME H5COPY-CMP-${testname}
COMMAND "${CMAKE_COMMAND}"
-D "TEST_PROGRAM=$<TARGET_FILE:h5copy>"
-D "TEST_ARGS=-i;./testfiles/${infile};-o;./testfiles/${outfile};${vparam};${sparam};${srcname};${dparam};${dstname}"
-D "TEST_FOLDER=${PROJECT_BINARY_DIR}"
-D "TEST_OUTPUT=./testfiles/${testname}.out.out"
-D "TEST_EXPECT=${resultcode}"
-D "TEST_REFERENCE=./testfiles/${testname}.out"
-D "TEST_MASK=true"
-P "${HDF5_RESOURCES_DIR}/runTest.cmake"
)
ENDIF (HDF5_ENABLE_USING_MEMCHECKER)
IF (NOT "${last_test}" STREQUAL "")
SET_TESTS_PROPERTIES (H5COPY-CMP-${testname} PROPERTIES DEPENDS ${last_test})
ENDIF (NOT "${last_test}" STREQUAL "")
SET (last_test "H5COPY-CMP-${testname}")
ENDMACRO (ADD_H5_CMP_TEST)
##############################################################################
##############################################################################
### T H E T E S T S ###
##############################################################################
##############################################################################
# --------------------------------------------------------------------
# test file names
# --------------------------------------------------------------------
SET (HDF_FILE1 h5copytst)
SET (HDF_FILE2 h5copy_ref)
SET (HDF_EXT_SRC_FILE h5copy_extlinks_src)
SET (HDF_EXT_TRG_FILE h5copy_extlinks_trg)
# Remove any output file left over from previous test run
ADD_TEST (
NAME H5COPY-clearall-objects
COMMAND ${CMAKE_COMMAND}
-E remove
./testfiles/${HDF_FILE1}.out.h5
./testfiles/${HDF_FILE1}.out.out
./testfiles/${HDF_FILE1}.out.out.err
./testfiles/${HDF_FILE2}.out.h5
./testfiles/${HDF_FILE2}.out.out
./testfiles/${HDF_FILE2}.out.out.err
./testfiles/${HDF_EXT_SRC_FILE}.out.h5
./testfiles/${HDF_EXT_SRC_FILE}.out.out
./testfiles/${HDF_EXT_SRC_FILE}.out.out.err
)
IF (NOT "${last_test}" STREQUAL "")
SET_TESTS_PROPERTIES (H5COPY-clearall-objects PROPERTIES DEPENDS ${last_test})
ENDIF (NOT "${last_test}" STREQUAL "")
SET (last_test "H5COPY-clearall-objects")
# "Test copying various forms of datasets"
ADD_H5_TEST (simple 0 ${HDF_FILE1}.h5 ${HDF_FILE1}.out.h5 -v -s simple -d simple)
ADD_H5_TEST (chunk 0 ${HDF_FILE1}.h5 ${HDF_FILE1}.out.h5 -v -s chunk -d chunk)
ADD_H5_TEST (compact 0 ${HDF_FILE1}.h5 ${HDF_FILE1}.out.h5 -v -s compact -d compact)
ADD_H5_TEST (compound 0 ${HDF_FILE1}.h5 ${HDF_FILE1}.out.h5 -v -s compound -d compound)
ADD_H5_TEST (compressed 0 ${HDF_FILE1}.h5 ${HDF_FILE1}.out.h5 -v -s compressed -d compressed)
ADD_H5_TEST (named_vl 0 ${HDF_FILE1}.h5 ${HDF_FILE1}.out.h5 -v -s named_vl -d named_vl)
ADD_H5_TEST (nested_vl 0 ${HDF_FILE1}.h5 ${HDF_FILE1}.out.h5 -v -s nested_vl -d nested_vl)
# "Test copying dataset within group in source file to root of destination"
ADD_H5_TEST (simple_top 0 ${HDF_FILE1}.h5 ${HDF_FILE1}.out.h5 -v -s grp_dsets/simple -d simple_top)
# "Test copying & renaming dataset"
ADD_H5_TEST (rename 0 ${HDF_FILE1}.h5 ${HDF_FILE1}.out.h5 -v -s compound -d rename)
# "Test copying empty, 'full' & 'nested' groups"
ADD_H5_TEST (grp_empty 0 ${HDF_FILE1}.h5 ${HDF_FILE1}.out.h5 -v -s grp_empty -d grp_empty)
ADD_H5_TEST (grp_dsets 0 ${HDF_FILE1}.h5 ${HDF_FILE1}.out.h5 -v -s grp_dsets -d grp_dsets)
ADD_H5_TEST (grp_nested 0 ${HDF_FILE1}.h5 ${HDF_FILE1}.out.h5 -v -s grp_nested -d grp_nested)
# "Test copying dataset within group in source file to group in destination"
ADD_H5_TEST (simple_group 0 ${HDF_FILE1}.h5 ${HDF_FILE1}.out.h5 -v -s /grp_dsets/simple -d /grp_dsets/simple_group)
# "Test copying & renaming group"
ADD_H5_TEST (grp_rename 0 ${HDF_FILE1}.h5 ${HDF_FILE1}.out.h5 -v -s grp_dsets -d grp_rename)
# "Test copying 'full' group hierarchy into group in destination file"
ADD_H5_TEST (grp_dsets_rename 0 ${HDF_FILE1}.h5 ${HDF_FILE1}.out.h5 -v -s grp_dsets -d /grp_rename/grp_dsets)
# "Test copying objects into group hier. that doesn't exist yet in destination file"
ADD_H5_TEST (A_B1_simple 0 ${HDF_FILE1}.h5 ${HDF_FILE1}.out.h5 -vp -s simple -d /A/B1/simple)
ADD_H5_TEST (A_B2_simple2 0 ${HDF_FILE1}.h5 ${HDF_FILE1}.out.h5 -vp -s simple -d /A/B2/simple2)
ADD_H5_TEST (C_D_simple 0 ${HDF_FILE1}.h5 ${HDF_FILE1}.out.h5 -vp -s /grp_dsets/simple -d /C/D/simple)
ADD_H5_TEST (E_F_grp_dsets 0 ${HDF_FILE1}.h5 ${HDF_FILE1}.out.h5 -vp -s /grp_dsets -d /E/F/grp_dsets)
ADD_H5_TEST (G_H_grp_nested 0 ${HDF_FILE1}.h5 ${HDF_FILE1}.out.h5 -vp -s /grp_nested -d /G/H/grp_nested)
# Verify that the file created above is correct
ADD_H5LS_TEST (${HDF_FILE1} basic)
############# COPY REFERENCES ##############
# Remove any output file left over from previous test run
ADD_TEST (
NAME H5COPY-clear-refs
COMMAND ${CMAKE_COMMAND}
-E remove
./testfiles/${HDF_FILE2}.out.h5
./testfiles/${HDF_FILE2}.out.out
./testfiles/${HDF_FILE2}.out.out.err
)
IF (NOT "${last_test}" STREQUAL "")
SET_TESTS_PROPERTIES (H5COPY-clear-refs PROPERTIES DEPENDS ${last_test})
ENDIF (NOT "${last_test}" STREQUAL "")
SET (last_test "H5COPY-clear-refs")
# "Test copying object and region references"
ADD_H5_F_TEST (region_ref 2 ${HDF_FILE2}.h5 ${HDF_FILE2}.out.h5 ref -v -s / -d /COPY)
# Verify that the file created above is correct
ADD_H5LS_TEST (${HDF_FILE2} refs)
############# COPY EXT LINKS ##############
# Remove any output file left over from previous test run
ADD_TEST (
NAME H5COPY-clear-ext-links
COMMAND ${CMAKE_COMMAND}
-E remove
./testfiles/${HDF_EXT_SRC_FILE}.out.h5
./testfiles/${HDF_EXT_SRC_FILE}.out.out
./testfiles/${HDF_EXT_SRC_FILE}.out.out.err
)
IF (NOT "${last_test}" STREQUAL "")
SET_TESTS_PROPERTIES (H5COPY-clear-ext-links PROPERTIES DEPENDS ${last_test})
ENDIF (NOT "${last_test}" STREQUAL "")
SET (last_test "H5COPY-clear-ext-links")
# "Test copying external link directly without -f ext"
ADD_H5_TEST (ext_link 2 ${HDF_EXT_SRC_FILE}.h5 ${HDF_EXT_SRC_FILE}.out.h5 -v -s /group_ext/extlink_dset -d /copy1_dset)
# "Test copying external link directly with -f ext"
ADD_H5_F_TEST (ext_link_f 2 ${HDF_EXT_SRC_FILE}.h5 ${HDF_EXT_SRC_FILE}.out.h5 ext -v -s /group_ext/extlink_dset -d /copy2_dset)
# "Test copying dangling external link (no obj) directly without -f ext"
ADD_H5_TEST (ext_dangle_noobj 2 ${HDF_EXT_SRC_FILE}.h5 ${HDF_EXT_SRC_FILE}.out.h5 -v -s /group_ext/extlink_notyet1 -d /copy_dangle1_1)
# "Test copying dangling external link (no obj) directly with -f ext"
ADD_H5_F_TEST (ext_dangle_noobj_f 2 ${HDF_EXT_SRC_FILE}.h5 ${HDF_EXT_SRC_FILE}.out.h5 ext -v -s /group_ext/extlink_notyet1 -d /copy_dangle1_2)
# "Test copying dangling external link (no file) directly without -f ext"
ADD_H5_TEST (ext_dangle_nofile 2 ${HDF_EXT_SRC_FILE}.h5 ${HDF_EXT_SRC_FILE}.out.h5 -v -s /group_ext/extlink_notyet2 -d /copy_dangle2_1)
# "Test copying dangling external link (no file) directly with -f ext"
ADD_H5_F_TEST (ext_dangle_nofile_f 2 ${HDF_EXT_SRC_FILE}.h5 ${HDF_EXT_SRC_FILE}.out.h5 ext -v -s /group_ext/extlink_notyet2 -d /copy_dangle2_2)
# "Test copying a group contains external links without -f ext"
ADD_H5_TEST (ext_link_group 2 ${HDF_EXT_SRC_FILE}.h5 ${HDF_EXT_SRC_FILE}.out.h5 -v -s /group_ext -d /copy1_group)
# "Test copying a group contains external links with -f ext"
ADD_H5_F_TEST (ext_link_group_f 2 ${HDF_EXT_SRC_FILE}.h5 ${HDF_EXT_SRC_FILE}.out.h5 ext -v -s /group_ext -d /copy2_group)
# Verify that the file created above is correct
ADD_H5LS_TEST (${HDF_EXT_SRC_FILE} links)
############# Test misc. ##############
# Remove any output file left over from previous test run
ADD_TEST (
NAME H5COPY-clear-misc
COMMAND ${CMAKE_COMMAND}
-E remove
./testfiles/h5copy_misc1.out.out
./testfiles/h5copy_misc1.out.out.err
./testfiles/${HDF_FILE1}.out.h5
)
IF (NOT "${last_test}" STREQUAL "")
SET_TESTS_PROPERTIES (H5COPY-clear-misc PROPERTIES DEPENDS ${last_test})
ENDIF (NOT "${last_test}" STREQUAL "")
SET (last_test "H5COPY-clear-misc")
#-----------------------------------------------------------------
# "Test copying object into group which doesn't exist, without -p"
#
ADD_H5_CMP_TEST (h5copy_misc1 1 ${HDF_FILE1}.h5 ${HDF_FILE1}.out.h5 -v -s /simple -d /g1/g2/simple)
# Remove any output file left over from previous test run
ADD_TEST (
NAME H5COPY-clear-samefile
COMMAND ${CMAKE_COMMAND}
-E remove
./testfiles/${HDF_FILE1}.out.h5
)
IF (NOT "${last_test}" STREQUAL "")
SET_TESTS_PROPERTIES (H5COPY-clear-samefile PROPERTIES DEPENDS ${last_test})
ENDIF (NOT "${last_test}" STREQUAL "")
SET (last_test "H5COPY-clear-samefile")
#-------------------------------------------
# "Test copying objects to the same file "
#
# create temporary test file with some objects
ADD_H5_TEST (samefile1_pre 0 ${HDF_FILE1}.h5 ${HDF_FILE1}.out.h5 -v -s /simple -d /simple)
ADD_H5_TEST (samefile2_pre 0 ${HDF_FILE1}.h5 ${HDF_FILE1}.out.h5 -v -s /grp_dsets -d /grp_dsets)
# actual test cases
# - dataset
ADD_H5_TEST (samefile1 0 ${HDF_FILE1}.out.h5 ${HDF_FILE1}.out.h5 -v -s /simple -d /simple_cp)
# - group with some datasets
ADD_H5_TEST (samefile2 0 ${HDF_FILE1}.out.h5 ${HDF_FILE1}.out.h5 -v -s /grp_dsets -d /grp_dsets_cp)
ENDIF (BUILD_TESTING)
##############################################################################
##############################################################################
### I N S T A L L A T I O N ###
##############################################################################
##############################################################################
#-----------------------------------------------------------------------------
# Rules for Installation of tools using make Install target
#-----------------------------------------------------------------------------
INSTALL (
TARGETS
h5copy
RUNTIME DESTINATION
${HDF5_INSTALL_BIN_DIR}/tools
COMPONENT
toolsapplications
)
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