hdf5/bin
jhendersonHDF b16808d351
Sync with develop (#3737)
* Correct ld in format strings in cmpd_dset.c (#3697)

Removes clang warnings

* Clean up comments. (#3695)

* Add NVidia compiler support and CI (#3686)

* Work around Theta system issue failure in links test (#3710)

When the Subfiling VFD is enabled, the links test may
try to initialize the Subfiling VFD and call MPI_Init_thread.
On Theta, this appears to have an issue that will cause
the links test to fail. Reworked the test to check for
the same conditions in a more roundabout way that doesn't
involved initializing the Subfiling VFD

* Fix issue with unmatched messages in ph5diff (#3719)

* provide an alternative to mapfile for older bash (#3717)

* Attempt to quiet some warnings with cray compilers. (#3724)

* Fix CMake VOL passthrough tests by copying files to correct directory (#3721)

* Develop intel split (#3722)

* Split intel compiler flags into sub-folders
* Update Intel options for warnings
* Mostly CMake, Autotools needs additional work

* Fixes and adjustments to t_filters_parallel (#3714)

Broadcast number of datasets to create in multi-dataset I/O cases
so that interference with random number generation doesn't cause
mismatches between ranks

Set fill time for datasets to "never" by default and adjust on a
per-test basis to avoid writing fill values to chunks when it's
unnecessary

Reduce number of loops run in some tests when performing multi-dataset
I/O

Fix an issue in the "fill time never" test where data verification
could fill if file space reuse causes application buffers to be
filled with chosen fill value when reading from datasets with
uninitialized storage

Skip multi-chunk I/O test configurations for multi-dataset I/O
configurations when the TestExpress level is > 1 since those
tests can be more stressful on the file system

Disable use of persistent file free space management for now
since it occasionally runs into an infinite loop in the library's
free space management code

* Suppress cast-qual warning in H5TB Fortran wrapper (#3728)

This interface is fundamentally broken, const-wise.

* Add new API function H5Pget_actual_select_io_mode() (#2974)

This function allows the user to determine if the library performed selection I/O, vector I/O, or scalar (legacy) I/O during the last HDF5 operation performed with the provided DXPL. Expanded existing tests to check this functionality.

* Test scripts now execute in-source with creation of tmp dir (#3723)

Fixes a few issues created in #3580:

* Fixes a problem where committed tools test files were deleted when cleaning after an in-source build
* Fixes issues with test file paths in Autotools tools test scripts

* Add -h and --help as flags in h5cc & h5fc (#3729)

Adds these common help flags in addition to -help

* Update the library version matrix for H5Pset_libver_bounds() (#3702)

* Fixed #3524

Added 1.12, 1.14, and 1.16 to the table for libver bounds in the H5Pset_libver_bounds docs.

* Remove references to LIBVER_V116

---------

Co-authored-by: H. Joe Lee <hyoklee@hdfgroup.org>
Co-authored-by: Allen Byrne <50328838+byrnHDF@users.noreply.github.com>
Co-authored-by: Scot Breitenfeld <brtnfld@hdfgroup.org>
Co-authored-by: Dana Robinson <43805+derobins@users.noreply.github.com>
Co-authored-by: Neil Fortner <fortnern@gmail.com>
Co-authored-by: Glenn Song <43005495+glennsong09@users.noreply.github.com>
Co-authored-by: bmribler <39579120+bmribler@users.noreply.github.com>
2023-10-20 18:08:49 -07:00
..
batch Bring the H5detect removal change from develop (#3648) 2023-10-09 10:42:46 -07:00
pkgscrpts Update copyright headers (#2184) 2022-11-01 16:02:27 -05:00
buildhdf5 sync bin dir with develop (#3269) 2023-07-24 16:48:11 -05:00
checkapi Update copyright headers (#2184) 2022-11-01 16:02:27 -05:00
chkcopyright sync bin dir with develop (#3269) 2023-07-24 16:48:11 -05:00
cmakehdf5 sync bin dir with develop (#3269) 2023-07-24 16:48:11 -05:00
debug-ohdr Update copyright headers (#2184) 2022-11-01 16:02:27 -05:00
format_source sync bin dir with develop (#3269) 2023-07-24 16:48:11 -05:00
genparser Update copyright headers (#2184) 2022-11-01 16:02:27 -05:00
h5cc.in Sync with develop (#3737) 2023-10-20 18:08:49 -07:00
h5redeploy.in Update copyright headers (#2184) 2022-11-01 16:02:27 -05:00
h5vers 1.14 sync with develop (#3660) 2023-10-12 11:32:23 -05:00
iostats Update copyright headers (#2184) 2022-11-01 16:02:27 -05:00
make_err 1.14 sync with develop (#3660) 2023-10-12 11:32:23 -05:00
make_overflow sync bin dir with develop (#3269) 2023-07-24 16:48:11 -05:00
make_vers sync bin dir with develop (#3269) 2023-07-24 16:48:11 -05:00
Makefile.am Update copyright headers (#2184) 2022-11-01 16:02:27 -05:00
makehelp
output_filter.sh sync bin dir with develop (#3269) 2023-07-24 16:48:11 -05:00
README.md Remove unused files (#3276) 2023-07-27 09:14:32 -07:00
release 1.14 sync with develop (#3660) 2023-10-12 11:32:23 -05:00
restore.sh Update copyright headers (#2184) 2022-11-01 16:02:27 -05:00
runbkgprog Update copyright headers (#2184) 2022-11-01 16:02:27 -05:00
switch_maint_mode sync bin dir with develop (#3269) 2023-07-24 16:48:11 -05:00
trace Sync with develop (#2871) 2023-05-01 22:25:48 -07:00
warnhist sync bin dir with develop (#3269) 2023-07-24 16:48:11 -05:00

Scripts in bin and their purpose

Programs run via autogen.sh (or the equivalent in CMake) are indicated.

Program Purpose
buildhdf5 Convenience script to build HDF5 using the Autotools
checkapi Checks if public API calls are used in internal functions
chkcopyright Checks if files have appropriate copyright statements
cmakehdf5 Convenience script to build HDF5 using CMake
debug-ohdr Examines debug output from H5O_open/close to look for open objects
format_source Runs clang-format over the source files, applying our rules
genparser Creates the flex/bison-based parser files in the high-level library
h5cc.in Input file from which h5cc is created
h5redeploy.in Input file from which h5redeploy is created
h5vers Updates the library version number
make_err Generates the H5E header files (called in autogen.sh)
make_vers Generates H5version.h (called in autogen.sh)
make_overflow Generates H5overflow.h (called in autogen.sh)
output_filter Used in the tools test code to strip extraneous output before we diff files
restore.sh Removes files generated by autogen.sh
runbkprog Used by CMake to run test programs in the background
switch_maint_mode Switches maintainer mode on/off in configure.ac
trace Adds TRACE macros to HDF5 C library source files (run by autogen.sh)
warnhist Generates compiler warning statistics for gcc/clang when fed output of make

TODO

  • chkcopyright is currently semi-broken as it doesn't handle the full variety of copyright headers we need. We're leaving it in place, though, in the hopes that someone will update it in the future.
  • Extending warnhist to better understand the output of additional compilers/languages would be nice.