mirror/hdf5
2
0
Fork 0
mirror of https://github.com/HDFGroup/hdf5.git synced 2024-12-27 08:01:04 +08:00
Code Issues Packages Projects Releases Wiki Activity
afa47df9a1
hdf5/testpar/t_file.c
jhendersonHDF 28d2b6771f
HDF5 API test updates (#3835) 
* HDF5 API test updates

Removed test duplication from bringing API tests
back into the library from external VOL tests
repo

Synced changes between API tests and library's
tests

Updated API tests CMake code to directly use and
install testhdf5, testphdf5, etc. instead of
creating duplicate binaries

Added new h5_using_native_vol() test function to
determine whether the VOL connector being used
is (or the VOL connector stack being used resolves
to) the native VOL connector

* Remove duplicate variable
2023-11-13 13:49:38 -06:00

1260 lines
46 KiB
C
Raw Blame History

/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by The HDF Group. *
* All rights reserved. *
* *
* This file is part of HDF5. The full HDF5 copyright notice, including *
* terms governing use, modification, and redistribution, is contained in *
* the COPYING file, which can be found at the root of the source code *
* distribution tree, or in https://www.hdfgroup.org/licenses. *
* If you do not have access to either file, you may request a copy from *
* help@hdfgroup.org. *
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
/*
* Parallel tests for file operations
*/
#include "testphdf5.h"
#include "H5CXprivate.h" /* API Contexts */
#include "H5Iprivate.h"
#include "H5PBprivate.h"
/*
* This file needs to access private information from the H5F package.
*/
#define H5AC_FRIEND /*suppress error about including H5ACpkg */
#include "H5ACpkg.h"
#define H5C_FRIEND /*suppress error about including H5Cpkg */
#include "H5Cpkg.h"
#define H5F_FRIEND /*suppress error about including H5Fpkg */
#define H5F_TESTING
#include "H5Fpkg.h"
#define H5MF_FRIEND /*suppress error about including H5MFpkg */
#include "H5MFpkg.h"
#define NUM_DSETS 5
int mpi_size, mpi_rank;
static int create_file(const char *filename, hid_t fcpl, hid_t fapl, int metadata_write_strategy);
static int open_file(const char *filename, hid_t fapl, int metadata_write_strategy, hsize_t page_size,
size_t page_buffer_size);
/*
* test file access by communicator besides COMM_WORLD.
* Split COMM_WORLD into two, one (even_comm) contains the original
* processes of even ranks. The other (odd_comm) contains the original
* processes of odd ranks. Processes in even_comm creates a file, then
* cloose it, using even_comm. Processes in old_comm just do a barrier
* using odd_comm. Then they all do a barrier using COMM_WORLD.
* If the file creation and cloose does not do correct collective action
* according to the communicator argument, the processes will freeze up
* sooner or later due to barrier mixed up.
*/
void
test_split_comm_access(void)
{
MPI_Comm comm;
MPI_Info info = MPI_INFO_NULL;
int is_old, mrc;
int newrank, newprocs;
hid_t fid; /* file IDs */
hid_t acc_tpl; /* File access properties */
herr_t ret; /* generic return value */
const char *filename;
filename = (const char *)GetTestParameters();
if (VERBOSE_MED)
printf("Split Communicator access test on file %s\n", filename);
/* set up MPI parameters */
MPI_Comm_size(MPI_COMM_WORLD, &mpi_size);
MPI_Comm_rank(MPI_COMM_WORLD, &mpi_rank);
/* Make sure the connector supports the API functions being tested */
if (!(vol_cap_flags_g & H5VL_CAP_FLAG_FILE_BASIC)) {
if (MAINPROCESS) {
puts("SKIPPED");
printf(" API functions for basic file aren't supported with this connector\n");
fflush(stdout);
}
return;
}
is_old = mpi_rank % 2;
mrc = MPI_Comm_split(MPI_COMM_WORLD, is_old, mpi_rank, &comm);
VRFY((mrc == MPI_SUCCESS), "");
MPI_Comm_size(comm, &newprocs);
MPI_Comm_rank(comm, &newrank);
if (is_old) {
/* odd-rank processes */
mrc = MPI_Barrier(comm);
VRFY((mrc == MPI_SUCCESS), "");
}
else {
/* even-rank processes */
int sub_mpi_rank; /* rank in the sub-comm */
MPI_Comm_rank(comm, &sub_mpi_rank);
/* setup file access template */
acc_tpl = create_faccess_plist(comm, info, facc_type);
VRFY((acc_tpl >= 0), "");
/* create the file collectively */
fid = H5Fcreate(filename, H5F_ACC_TRUNC, H5P_DEFAULT, acc_tpl);
VRFY((fid >= 0), "H5Fcreate succeeded");
/* close the file */
ret = H5Fclose(fid);
VRFY((ret >= 0), "");
/* delete the test file */
H5E_BEGIN_TRY
{
ret = H5Fdelete(filename, acc_tpl);
}
H5E_END_TRY
VRFY((ret >= 0), "H5Fdelete succeeded");
/* Release file-access template */
ret = H5Pclose(acc_tpl);
VRFY((ret >= 0), "");
}
mrc = MPI_Comm_free(&comm);
VRFY((mrc == MPI_SUCCESS), "MPI_Comm_free succeeded");
mrc = MPI_Barrier(MPI_COMM_WORLD);
VRFY((mrc == MPI_SUCCESS), "final MPI_Barrier succeeded");
}
void
test_page_buffer_access(void)
{
hid_t file_id = H5I_INVALID_HID; /* File ID */
hid_t fcpl, fapl;
size_t page_count = 0;
int i, num_elements = 200;
haddr_t raw_addr, meta_addr;
int *data;
H5F_t *f = NULL;
herr_t ret; /* generic return value */
const char *filename;
bool api_ctx_pushed = false; /* Whether API context pushed */
MPI_Comm_rank(MPI_COMM_WORLD, &mpi_rank);
MPI_Comm_size(MPI_COMM_WORLD, &mpi_size);
filename = (const char *)GetTestParameters();
if (VERBOSE_MED)
printf("Page Buffer Usage in Parallel %s\n", filename);
fapl = create_faccess_plist(MPI_COMM_WORLD, MPI_INFO_NULL, facc_type);
VRFY((fapl >= 0), "create_faccess_plist succeeded");
fcpl = H5Pcreate(H5P_FILE_CREATE);
VRFY((fcpl >= 0), "");
ret = H5Pset_file_space_strategy(fcpl, H5F_FSPACE_STRATEGY_PAGE, 1, (hsize_t)0);
VRFY((ret == 0), "");
ret = H5Pset_file_space_page_size(fcpl, sizeof(int) * 128);
VRFY((ret == 0), "");
ret = H5Pset_page_buffer_size(fapl, sizeof(int) * 100000, 0, 0);
VRFY((ret == 0), "");
/* This should fail because collective metadata writes are not supported with page buffering */
H5E_BEGIN_TRY
{
file_id = H5Fcreate(filename, H5F_ACC_TRUNC, fcpl, fapl);
}
H5E_END_TRY
VRFY((file_id < 0), "H5Fcreate failed");
/* disable collective metadata writes for page buffering to work */
ret = H5Pset_coll_metadata_write(fapl, false);
VRFY((ret >= 0), "");
ret = create_file(filename, fcpl, fapl, H5AC_METADATA_WRITE_STRATEGY__DISTRIBUTED);
VRFY((ret == 0), "");
ret = open_file(filename, fapl, H5AC_METADATA_WRITE_STRATEGY__DISTRIBUTED, sizeof(int) * 100,
sizeof(int) * 100000);
VRFY((ret == 0), "");
ret = create_file(filename, fcpl, fapl, H5AC_METADATA_WRITE_STRATEGY__PROCESS_0_ONLY);
VRFY((ret == 0), "");
ret = open_file(filename, fapl, H5AC_METADATA_WRITE_STRATEGY__PROCESS_0_ONLY, sizeof(int) * 100,
sizeof(int) * 100000);
VRFY((ret == 0), "");
ret = H5Pset_file_space_page_size(fcpl, sizeof(int) * 100);
VRFY((ret == 0), "");
data = (int *)malloc(sizeof(int) * (size_t)num_elements);
/* initialize all the elements to have a value of -1 */
for (i = 0; i < num_elements; i++)
data[i] = -1;
if (MAINPROCESS) {
hid_t fapl_self = H5I_INVALID_HID;
fapl_self = create_faccess_plist(MPI_COMM_SELF, MPI_INFO_NULL, facc_type);
ret = H5Pset_page_buffer_size(fapl_self, sizeof(int) * 1000, 0, 0);
VRFY((ret == 0), "");
/* collective metadata writes do not work with page buffering */
ret = H5Pset_coll_metadata_write(fapl_self, false);
VRFY((ret >= 0), "");
file_id = H5Fcreate(filename, H5F_ACC_TRUNC, fcpl, fapl_self);
VRFY((file_id >= 0), "");
/* Push API context */
ret = H5CX_push();
VRFY((ret == 0), "H5CX_push()");
api_ctx_pushed = true;
/* Get a pointer to the internal file object */
f = (H5F_t *)H5I_object(file_id);
VRFY((f->shared->page_buf != NULL), "Page Buffer created with 1 process");
/* allocate space for 200 raw elements */
raw_addr = H5MF_alloc(f, H5FD_MEM_DRAW, sizeof(int) * (size_t)num_elements);
VRFY((raw_addr != HADDR_UNDEF), "");
/* allocate space for 200 metadata elements */
meta_addr = H5MF_alloc(f, H5FD_MEM_SUPER, sizeof(int) * (size_t)num_elements);
VRFY((meta_addr != HADDR_UNDEF), "");
page_count = 0;
ret = H5F_block_write(f, H5FD_MEM_SUPER, meta_addr, sizeof(int) * (size_t)num_elements, data);
VRFY((ret == 0), "");
ret = H5F_block_write(f, H5FD_MEM_SUPER, meta_addr, sizeof(int) * (size_t)num_elements, data);
ret = H5F_block_write(f, H5FD_MEM_DRAW, raw_addr, sizeof(int) * (size_t)num_elements, data);
VRFY((ret == 0), "");
VRFY((H5SL_count(f->shared->page_buf->slist_ptr) == page_count), "Wrong number of pages in PB");
/* update the first 50 elements */
for (i = 0; i < 50; i++)
data[i] = i;
ret = H5F_block_write(f, H5FD_MEM_DRAW, raw_addr, sizeof(int) * 50, data);
H5Eprint2(H5E_DEFAULT, stderr);
VRFY((ret == 0), "");
ret = H5F_block_write(f, H5FD_MEM_SUPER, meta_addr, sizeof(int) * 50, data);
VRFY((ret == 0), "");
page_count += 2;
VRFY((H5SL_count(f->shared->page_buf->slist_ptr) == page_count), "Wrong number of pages in PB");
/* update the second 50 elements */
for (i = 0; i < 50; i++)
data[i] = i + 50;
ret = H5F_block_write(f, H5FD_MEM_DRAW, raw_addr + (sizeof(int) * 50), sizeof(int) * 50, data);
VRFY((ret == 0), "");
ret = H5F_block_write(f, H5FD_MEM_SUPER, meta_addr + (sizeof(int) * 50), sizeof(int) * 50, data);
VRFY((ret == 0), "");
VRFY((H5SL_count(f->shared->page_buf->slist_ptr) == page_count), "Wrong number of pages in PB");
/* update 100 - 200 */
for (i = 0; i < 100; i++)
data[i] = i + 100;
ret = H5F_block_write(f, H5FD_MEM_DRAW, raw_addr + (sizeof(int) * 100), sizeof(int) * 100, data);
VRFY((ret == 0), "");
ret = H5F_block_write(f, H5FD_MEM_SUPER, meta_addr + (sizeof(int) * 100), sizeof(int) * 100, data);
VRFY((ret == 0), "");
VRFY((H5SL_count(f->shared->page_buf->slist_ptr) == page_count), "Wrong number of pages in PB");
ret = H5PB_flush(f->shared);
VRFY((ret == 0), "");
/* read elements 0 - 200 */
ret = H5F_block_read(f, H5FD_MEM_DRAW, raw_addr, sizeof(int) * 200, data);
VRFY((ret == 0), "");
VRFY((H5SL_count(f->shared->page_buf->slist_ptr) == page_count), "Wrong number of pages in PB");
for (i = 0; i < 200; i++)
VRFY((data[i] == i), "Read different values than written");
ret = H5F_block_read(f, H5FD_MEM_SUPER, meta_addr, sizeof(int) * 200, data);
VRFY((ret == 0), "");
VRFY((H5SL_count(f->shared->page_buf->slist_ptr) == page_count), "Wrong number of pages in PB");
for (i = 0; i < 200; i++)
VRFY((data[i] == i), "Read different values than written");
/* read elements 0 - 50 */
ret = H5F_block_read(f, H5FD_MEM_DRAW, raw_addr, sizeof(int) * 50, data);
VRFY((ret == 0), "");
VRFY((H5SL_count(f->shared->page_buf->slist_ptr) == page_count), "Wrong number of pages in PB");
for (i = 0; i < 50; i++)
VRFY((data[i] == i), "Read different values than written");
ret = H5F_block_read(f, H5FD_MEM_SUPER, meta_addr, sizeof(int) * 50, data);
VRFY((ret == 0), "");
VRFY((H5SL_count(f->shared->page_buf->slist_ptr) == page_count), "Wrong number of pages in PB");
for (i = 0; i < 50; i++)
VRFY((data[i] == i), "Read different values than written");
/* close the file */
ret = H5Fclose(file_id);
VRFY((ret >= 0), "H5Fclose succeeded");
ret = H5Pclose(fapl_self);
VRFY((ret >= 0), "H5Pclose succeeded");
/* Pop API context */
if (api_ctx_pushed) {
ret = H5CX_pop(false);
VRFY((ret == 0), "H5CX_pop()");
api_ctx_pushed = false;
}
}
MPI_Barrier(MPI_COMM_WORLD);
if (mpi_size > 1) {
ret = H5Pset_page_buffer_size(fapl, sizeof(int) * 1000, 0, 0);
VRFY((ret == 0), "");
/* collective metadata writes do not work with page buffering */
ret = H5Pset_coll_metadata_write(fapl, false);
VRFY((ret >= 0), "");
file_id = H5Fcreate(filename, H5F_ACC_TRUNC, fcpl, fapl);
VRFY((file_id >= 0), "");
/* Push API context */
ret = H5CX_push();
VRFY((ret == 0), "H5CX_push()");
api_ctx_pushed = true;
/* Get a pointer to the internal file object */
f = (H5F_t *)H5I_object(file_id);
VRFY((f->shared->page_buf != NULL), "Page Buffer created with 1 process");
/* allocate space for 200 raw elements */
raw_addr = H5MF_alloc(f, H5FD_MEM_DRAW, sizeof(int) * (size_t)num_elements);
VRFY((raw_addr != HADDR_UNDEF), "");
/* allocate space for 200 metadata elements */
meta_addr = H5MF_alloc(f, H5FD_MEM_SUPER, sizeof(int) * (size_t)num_elements);
VRFY((meta_addr != HADDR_UNDEF), "");
page_count = 0;
ret = H5F_block_write(f, H5FD_MEM_SUPER, meta_addr, sizeof(int) * (size_t)num_elements, data);
VRFY((ret == 0), "");
ret = H5F_block_write(f, H5FD_MEM_DRAW, raw_addr, sizeof(int) * (size_t)num_elements, data);
VRFY((ret == 0), "");
VRFY((H5SL_count(f->shared->page_buf->slist_ptr) == page_count), "Wrong number of pages in PB");
/* update the first 50 elements */
for (i = 0; i < 50; i++)
data[i] = i;
ret = H5F_block_write(f, H5FD_MEM_DRAW, raw_addr, sizeof(int) * 50, data);
VRFY((ret == 0), "");
ret = H5F_block_write(f, H5FD_MEM_SUPER, meta_addr, sizeof(int) * 50, data);
VRFY((ret == 0), "");
VRFY((H5SL_count(f->shared->page_buf->slist_ptr) == page_count), "Wrong number of pages in PB");
/* update the second 50 elements */
for (i = 0; i < 50; i++)
data[i] = i + 50;
ret = H5F_block_write(f, H5FD_MEM_DRAW, raw_addr + (sizeof(int) * 50), sizeof(int) * 50, data);
VRFY((ret == 0), "");
ret = H5F_block_write(f, H5FD_MEM_SUPER, meta_addr + (sizeof(int) * 50), sizeof(int) * 50, data);
VRFY((ret == 0), "");
VRFY((H5SL_count(f->shared->page_buf->slist_ptr) == page_count), "Wrong number of pages in PB");
/* update 100 - 200 */
for (i = 0; i < 100; i++)
data[i] = i + 100;
ret = H5F_block_write(f, H5FD_MEM_DRAW, raw_addr + (sizeof(int) * 100), sizeof(int) * 100, data);
VRFY((ret == 0), "");
ret = H5F_block_write(f, H5FD_MEM_SUPER, meta_addr + (sizeof(int) * 100), sizeof(int) * 100, data);
VRFY((ret == 0), "");
VRFY((H5SL_count(f->shared->page_buf->slist_ptr) == page_count), "Wrong number of pages in PB");
ret = H5Fflush(file_id, H5F_SCOPE_GLOBAL);
VRFY((ret == 0), "");
/* read elements 0 - 200 */
ret = H5F_block_read(f, H5FD_MEM_DRAW, raw_addr, sizeof(int) * 200, data);
VRFY((ret == 0), "");
VRFY((H5SL_count(f->shared->page_buf->slist_ptr) == page_count), "Wrong number of pages in PB");
for (i = 0; i < 200; i++)
VRFY((data[i] == i), "Read different values than written");
ret = H5F_block_read(f, H5FD_MEM_SUPER, meta_addr, sizeof(int) * 200, data);
VRFY((ret == 0), "");
VRFY((H5SL_count(f->shared->page_buf->slist_ptr) == page_count), "Wrong number of pages in PB");
for (i = 0; i < 200; i++)
VRFY((data[i] == i), "Read different values than written");
/* read elements 0 - 50 */
ret = H5F_block_read(f, H5FD_MEM_DRAW, raw_addr, sizeof(int) * 50, data);
VRFY((ret == 0), "");
VRFY((H5SL_count(f->shared->page_buf->slist_ptr) == page_count), "Wrong number of pages in PB");
for (i = 0; i < 50; i++)
VRFY((data[i] == i), "Read different values than written");
ret = H5F_block_read(f, H5FD_MEM_SUPER, meta_addr, sizeof(int) * 50, data);
VRFY((ret == 0), "");
page_count += 1;
VRFY((H5SL_count(f->shared->page_buf->slist_ptr) == page_count), "Wrong number of pages in PB");
for (i = 0; i < 50; i++)
VRFY((data[i] == i), "Read different values than written");
MPI_Barrier(MPI_COMM_WORLD);
/* reset the first 50 elements to -1*/
for (i = 0; i < 50; i++)
data[i] = -1;
ret = H5F_block_write(f, H5FD_MEM_DRAW, raw_addr, sizeof(int) * 50, data);
VRFY((ret == 0), "");
VRFY((H5SL_count(f->shared->page_buf->slist_ptr) == page_count), "Wrong number of pages in PB");
ret = H5F_block_write(f, H5FD_MEM_SUPER, meta_addr, sizeof(int) * 50, data);
VRFY((ret == 0), "");
VRFY((H5SL_count(f->shared->page_buf->slist_ptr) == page_count), "Wrong number of pages in PB");
/* read elements 0 - 50 */
ret = H5F_block_read(f, H5FD_MEM_DRAW, raw_addr, sizeof(int) * 50, data);
VRFY((ret == 0), "");
VRFY((H5SL_count(f->shared->page_buf->slist_ptr) == page_count), "Wrong number of pages in PB");
for (i = 0; i < 50; i++)
VRFY((data[i] == -1), "Read different values than written");
ret = H5F_block_read(f, H5FD_MEM_SUPER, meta_addr, sizeof(int) * 50, data);
VRFY((ret == 0), "");
VRFY((H5SL_count(f->shared->page_buf->slist_ptr) == page_count), "Wrong number of pages in PB");
for (i = 0; i < 50; i++)
VRFY((data[i] == -1), "Read different values than written");
/* close the file */
ret = H5Fclose(file_id);
VRFY((ret >= 0), "H5Fclose succeeded");
}
ret = H5Pclose(fapl);
VRFY((ret >= 0), "H5Pclose succeeded");
ret = H5Pclose(fcpl);
VRFY((ret >= 0), "H5Pclose succeeded");
/* Pop API context */
if (api_ctx_pushed) {
ret = H5CX_pop(false);
VRFY((ret == 0), "H5CX_pop()");
api_ctx_pushed = false;
}
free(data);
data = NULL;
MPI_Barrier(MPI_COMM_WORLD);
}
static int
create_file(const char *filename, hid_t fcpl, hid_t fapl, int metadata_write_strategy)
{
hid_t file_id, dset_id, grp_id;
hid_t sid, mem_dataspace;
hsize_t start[RANK];
hsize_t count[RANK];
hsize_t stride[RANK];
hsize_t block[RANK];
DATATYPE *data_array = NULL;
hsize_t dims[RANK], i;
hsize_t num_elements;
int k;
char dset_name[20];
H5F_t *f = NULL;
H5C_t *cache_ptr = NULL;
H5AC_cache_config_t config;
bool api_ctx_pushed = false; /* Whether API context pushed */
herr_t ret;
file_id = H5Fcreate(filename, H5F_ACC_TRUNC, fcpl, fapl);
VRFY((file_id >= 0), "");
ret = H5Fflush(file_id, H5F_SCOPE_GLOBAL);
VRFY((ret == 0), "");
/* Push API context */
ret = H5CX_push();
VRFY((ret == 0), "H5CX_push()");
api_ctx_pushed = true;
f = (H5F_t *)H5I_object(file_id);
VRFY((f != NULL), "");
cache_ptr = f->shared->cache;
cache_ptr->ignore_tags = true;
H5C_stats__reset(cache_ptr);
config.version = H5AC__CURR_CACHE_CONFIG_VERSION;
ret = H5AC_get_cache_auto_resize_config(cache_ptr, &config);
VRFY((ret == 0), "");
config.metadata_write_strategy = metadata_write_strategy;
ret = H5AC_set_cache_auto_resize_config(cache_ptr, &config);
VRFY((ret == 0), "");
grp_id = H5Gcreate2(file_id, "GROUP", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
VRFY((grp_id >= 0), "");
dims[0] = (hsize_t)(ROW_FACTOR * mpi_size);
dims[1] = (hsize_t)(COL_FACTOR * mpi_size);
sid = H5Screate_simple(RANK, dims, NULL);
VRFY((sid >= 0), "H5Screate_simple succeeded");
/* Each process takes a slabs of rows. */
block[0] = dims[0] / (hsize_t)mpi_size;
block[1] = dims[1];
stride[0] = block[0];
stride[1] = block[1];
count[0] = 1;
count[1] = 1;
start[0] = (hsize_t)mpi_rank * block[0];
start[1] = 0;
num_elements = block[0] * block[1];
/* allocate memory for data buffer */
data_array = (DATATYPE *)malloc(num_elements * sizeof(DATATYPE));
VRFY((data_array != NULL), "data_array malloc succeeded");
/* put some trivial data in the data_array */
for (i = 0; i < num_elements; i++)
data_array[i] = mpi_rank + 1;
ret = H5Sselect_hyperslab(sid, H5S_SELECT_SET, start, stride, count, block);
VRFY((ret >= 0), "H5Sset_hyperslab succeeded");
/* create a memory dataspace independently */
mem_dataspace = H5Screate_simple(1, &num_elements, NULL);
VRFY((mem_dataspace >= 0), "");
for (k = 0; k < NUM_DSETS; k++) {
snprintf(dset_name, sizeof(dset_name), "D1dset%d", k);
dset_id = H5Dcreate2(grp_id, dset_name, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
VRFY((dset_id >= 0), "");
ret = H5Dclose(dset_id);
VRFY((ret == 0), "");
snprintf(dset_name, sizeof(dset_name), "D2dset%d", k);
dset_id = H5Dcreate2(grp_id, dset_name, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
VRFY((dset_id >= 0), "");
ret = H5Dclose(dset_id);
VRFY((ret == 0), "");
snprintf(dset_name, sizeof(dset_name), "D3dset%d", k);
dset_id = H5Dcreate2(grp_id, dset_name, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
VRFY((dset_id >= 0), "");
ret = H5Dclose(dset_id);
VRFY((ret == 0), "");
snprintf(dset_name, sizeof(dset_name), "dset%d", k);
dset_id = H5Dcreate2(grp_id, dset_name, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
VRFY((dset_id >= 0), "");
ret = H5Dwrite(dset_id, H5T_NATIVE_INT, mem_dataspace, sid, H5P_DEFAULT, data_array);
VRFY((ret == 0), "");
ret = H5Dclose(dset_id);
VRFY((ret == 0), "");
memset(data_array, 0, num_elements * sizeof(DATATYPE));
dset_id = H5Dopen2(grp_id, dset_name, H5P_DEFAULT);
VRFY((dset_id >= 0), "");
ret = H5Dread(dset_id, H5T_NATIVE_INT, mem_dataspace, sid, H5P_DEFAULT, data_array);
VRFY((ret == 0), "");
ret = H5Dclose(dset_id);
VRFY((ret == 0), "");
for (i = 0; i < num_elements; i++)
VRFY((data_array[i] == mpi_rank + 1), "Dataset Verify failed");
snprintf(dset_name, sizeof(dset_name), "D1dset%d", k);
ret = H5Ldelete(grp_id, dset_name, H5P_DEFAULT);
VRFY((ret == 0), "");
snprintf(dset_name, sizeof(dset_name), "D2dset%d", k);
ret = H5Ldelete(grp_id, dset_name, H5P_DEFAULT);
VRFY((ret == 0), "");
snprintf(dset_name, sizeof(dset_name), "D3dset%d", k);
ret = H5Ldelete(grp_id, dset_name, H5P_DEFAULT);
VRFY((ret == 0), "");
}
ret = H5Gclose(grp_id);
VRFY((ret == 0), "");
ret = H5Fclose(file_id);
VRFY((ret == 0), "");
ret = H5Sclose(sid);
VRFY((ret == 0), "");
ret = H5Sclose(mem_dataspace);
VRFY((ret == 0), "");
/* Pop API context */
if (api_ctx_pushed) {
ret = H5CX_pop(false);
VRFY((ret == 0), "H5CX_pop()");
api_ctx_pushed = false;
}
MPI_Barrier(MPI_COMM_WORLD);
free(data_array);
return 0;
} /* create_file */
static int
open_file(const char *filename, hid_t fapl, int metadata_write_strategy, hsize_t page_size,
size_t page_buffer_size)
{
hid_t file_id, dset_id, grp_id, grp_id2;
hid_t sid, mem_dataspace;
DATATYPE *data_array = NULL;
hsize_t dims[RANK];
hsize_t start[RANK];
hsize_t count[RANK];
hsize_t stride[RANK];
hsize_t block[RANK];
int i, k, ndims;
hsize_t num_elements;
char dset_name[20];
H5F_t *f = NULL;
H5C_t *cache_ptr = NULL;
H5AC_cache_config_t config;
bool api_ctx_pushed = false; /* Whether API context pushed */
herr_t ret;
config.version = H5AC__CURR_CACHE_CONFIG_VERSION;
ret = H5Pget_mdc_config(fapl, &config);
VRFY((ret == 0), "");
config.metadata_write_strategy = metadata_write_strategy;
ret = H5Pget_mdc_config(fapl, &config);
VRFY((ret == 0), "");
file_id = H5Fopen(filename, H5F_ACC_RDWR, fapl);
H5Eprint2(H5E_DEFAULT, stderr);
VRFY((file_id >= 0), "");
/* Push API context */
ret = H5CX_push();
VRFY((ret == 0), "H5CX_push()");
api_ctx_pushed = true;
ret = H5Fflush(file_id, H5F_SCOPE_GLOBAL);
VRFY((ret == 0), "");
f = (H5F_t *)H5I_object(file_id);
VRFY((f != NULL), "");
cache_ptr = f->shared->cache;
MPI_Barrier(MPI_COMM_WORLD);
VRFY((f->shared->page_buf != NULL), "");
VRFY((f->shared->page_buf->page_size == page_size), "");
VRFY((f->shared->page_buf->max_size == page_buffer_size), "");
grp_id = H5Gopen2(file_id, "GROUP", H5P_DEFAULT);
VRFY((grp_id >= 0), "");
dims[0] = (hsize_t)(ROW_FACTOR * mpi_size);
dims[1] = (hsize_t)(COL_FACTOR * mpi_size);
/* Each process takes a slabs of rows. */
block[0] = dims[0] / (hsize_t)mpi_size;
block[1] = dims[1];
stride[0] = block[0];
stride[1] = block[1];
count[0] = 1;
count[1] = 1;
start[0] = (hsize_t)mpi_rank * block[0];
start[1] = 0;
num_elements = block[0] * block[1];
/* allocate memory for data buffer */
data_array = (DATATYPE *)malloc(num_elements * sizeof(DATATYPE));
VRFY((data_array != NULL), "data_array malloc succeeded");
/* create a memory dataspace independently */
mem_dataspace = H5Screate_simple(1, &num_elements, NULL);
VRFY((mem_dataspace >= 0), "");
for (k = 0; k < NUM_DSETS; k++) {
snprintf(dset_name, sizeof(dset_name), "dset%d", k);
dset_id = H5Dopen2(grp_id, dset_name, H5P_DEFAULT);
VRFY((dset_id >= 0), "");
sid = H5Dget_space(dset_id);
VRFY((dset_id >= 0), "H5Dget_space succeeded");
ndims = H5Sget_simple_extent_dims(sid, dims, NULL);
VRFY((ndims == 2), "H5Sget_simple_extent_dims succeeded");
VRFY(dims[0] == (hsize_t)(ROW_FACTOR * mpi_size), "Wrong dataset dimensions");
VRFY(dims[1] == (hsize_t)(COL_FACTOR * mpi_size), "Wrong dataset dimensions");
ret = H5Sselect_hyperslab(sid, H5S_SELECT_SET, start, stride, count, block);
VRFY((ret >= 0), "H5Sset_hyperslab succeeded");
ret = H5Dread(dset_id, H5T_NATIVE_INT, mem_dataspace, sid, H5P_DEFAULT, data_array);
VRFY((ret >= 0), "");
ret = H5Dclose(dset_id);
VRFY((ret >= 0), "");
ret = H5Sclose(sid);
VRFY((ret == 0), "");
for (i = 0; i < (int)num_elements; i++)
VRFY((data_array[i] == mpi_rank + 1), "Dataset Verify failed");
}
grp_id2 = H5Gcreate2(file_id, "GROUP/GROUP2", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
VRFY((grp_id2 >= 0), "");
ret = H5Gclose(grp_id2);
VRFY((ret == 0), "");
ret = H5Fflush(file_id, H5F_SCOPE_GLOBAL);
VRFY((ret == 0), "");
MPI_Barrier(MPI_COMM_WORLD);
/* flush invalidate each ring, starting from the outermost ring and
* working inward.
*/
for (i = 0; i < H5C__HASH_TABLE_LEN; i++) {
H5C_cache_entry_t *entry_ptr = NULL;
entry_ptr = cache_ptr->index[i];
while (entry_ptr != NULL) {
assert(entry_ptr->is_dirty == false);
if (!entry_ptr->is_pinned && !entry_ptr->is_protected) {
ret = H5AC_expunge_entry(f, entry_ptr->type, entry_ptr->addr, 0);
VRFY((ret == 0), "");
}
entry_ptr = entry_ptr->ht_next;
}
}
MPI_Barrier(MPI_COMM_WORLD);
grp_id2 = H5Gopen2(file_id, "GROUP/GROUP2", H5P_DEFAULT);
H5Eprint2(H5E_DEFAULT, stderr);
VRFY((grp_id2 >= 0), "");
ret = H5Gclose(grp_id2);
H5Eprint2(H5E_DEFAULT, stderr);
VRFY((ret == 0), "");
ret = H5Gclose(grp_id);
VRFY((ret == 0), "");
ret = H5Fclose(file_id);
VRFY((ret == 0), "");
ret = H5Sclose(mem_dataspace);
VRFY((ret == 0), "");
/* Pop API context */
if (api_ctx_pushed) {
ret = H5CX_pop(false);
VRFY((ret == 0), "H5CX_pop()");
api_ctx_pushed = false;
}
free(data_array);
return nerrors;
}
/*
* NOTE: See HDFFV-10894 and add tests later to verify MPI-specific properties in the
* incoming fapl that could conflict with the existing values in H5F_shared_t on
* multiple opens of the same file.
*/
void
test_file_properties(void)
{
hid_t fid = H5I_INVALID_HID; /* HDF5 file ID */
hid_t fapl_id = H5I_INVALID_HID; /* File access plist */
hid_t fapl_copy_id = H5I_INVALID_HID; /* File access plist */
bool is_coll;
htri_t are_equal;
const char *filename;
MPI_Comm comm = MPI_COMM_WORLD;
MPI_Info info = MPI_INFO_NULL;
MPI_Comm comm_out = MPI_COMM_NULL;
MPI_Info info_out = MPI_INFO_NULL;
herr_t ret; /* Generic return value */
int mpi_ret; /* MPI return value */
int cmp; /* Compare value */
/* set up MPI parameters */
mpi_ret = MPI_Comm_size(MPI_COMM_WORLD, &mpi_size);
VRFY((mpi_ret >= 0), "MPI_Comm_size succeeded");
mpi_ret = MPI_Comm_rank(MPI_COMM_WORLD, &mpi_rank);
VRFY((mpi_ret >= 0), "MPI_Comm_rank succeeded");
/* Make sure the connector supports the API functions being tested */
if (!(vol_cap_flags_g & H5VL_CAP_FLAG_FILE_BASIC)) {
if (MAINPROCESS) {
puts("SKIPPED");
printf(" API functions for basic file aren't supported with this connector\n");
fflush(stdout);
}
return;
}
filename = (const char *)GetTestParameters();
mpi_ret = MPI_Info_create(&info);
VRFY((mpi_ret >= 0), "MPI_Info_create succeeded");
mpi_ret = MPI_Info_set(info, "hdf_info_prop1", "xyz");
VRFY((mpi_ret == MPI_SUCCESS), "MPI_Info_set succeeded");
/* setup file access plist */
fapl_id = H5Pcreate(H5P_FILE_ACCESS);
VRFY((fapl_id != H5I_INVALID_HID), "H5Pcreate");
ret = H5Pset_fapl_mpio(fapl_id, comm, info);
VRFY((ret >= 0), "H5Pset_fapl_mpio");
/* Check getting and setting MPI properties
* (for use in VOL connectors, not the MPI-I/O VFD)
*/
ret = H5Pset_mpi_params(fapl_id, comm, info);
VRFY((ret >= 0), "H5Pset_mpi_params succeeded");
ret = H5Pget_mpi_params(fapl_id, &comm_out, &info_out);
VRFY((ret >= 0), "H5Pget_mpi_params succeeded");
/* Check the communicator */
VRFY((comm != comm_out), "Communicators should not be bitwise identical");
cmp = MPI_UNEQUAL;
mpi_ret = MPI_Comm_compare(comm, comm_out, &cmp);
VRFY((ret >= 0), "MPI_Comm_compare succeeded");
VRFY((cmp == MPI_CONGRUENT), "Communicators should be congruent via MPI_Comm_compare");
/* Check the info object */
VRFY((info != info_out), "Info objects should not be bitwise identical");
/* Free the obtained comm and info object */
mpi_ret = MPI_Comm_free(&comm_out);
VRFY((mpi_ret >= 0), "MPI_Comm_free succeeded");
mpi_ret = MPI_Info_free(&info_out);
VRFY((mpi_ret >= 0), "MPI_Info_free succeeded");
/* Copy the fapl and ensure it's equal to the original */
fapl_copy_id = H5Pcopy(fapl_id);
VRFY((fapl_copy_id != H5I_INVALID_HID), "H5Pcopy");
are_equal = H5Pequal(fapl_id, fapl_copy_id);
VRFY((true == are_equal), "H5Pequal");
/* Add a property to the copy and ensure it's different now */
mpi_ret = MPI_Info_set(info, "hdf_info_prop2", "abc");
VRFY((mpi_ret == MPI_SUCCESS), "MPI_Info_set");
ret = H5Pset_mpi_params(fapl_copy_id, comm, info);
VRFY((ret >= 0), "H5Pset_mpi_params succeeded");
are_equal = H5Pequal(fapl_id, fapl_copy_id);
VRFY((false == are_equal), "H5Pequal");
/* Add a property with the same key but a different value to the original
* and ensure they are still different.
*/
mpi_ret = MPI_Info_set(info, "hdf_info_prop2", "ijk");
VRFY((mpi_ret == MPI_SUCCESS), "MPI_Info_set");
ret = H5Pset_mpi_params(fapl_id, comm, info);
VRFY((ret >= 0), "H5Pset_mpi_params succeeded");
are_equal = H5Pequal(fapl_id, fapl_copy_id);
VRFY((false == are_equal), "H5Pequal");
/* Set the second property in the original to the same
* value as the copy and ensure they are the same now.
*/
mpi_ret = MPI_Info_set(info, "hdf_info_prop2", "abc");
VRFY((mpi_ret == MPI_SUCCESS), "MPI_Info_set");
ret = H5Pset_mpi_params(fapl_id, comm, info);
VRFY((ret >= 0), "H5Pset_mpi_params succeeded");
are_equal = H5Pequal(fapl_id, fapl_copy_id);
VRFY((true == are_equal), "H5Pequal");
/* create the file */
fid = H5Fcreate(filename, H5F_ACC_TRUNC, H5P_DEFAULT, fapl_id);
VRFY((fid != H5I_INVALID_HID), "H5Fcreate succeeded");
/* verify settings for file access properties */
/* Collective metadata writes */
ret = H5Pget_coll_metadata_write(fapl_id, &is_coll);
VRFY((ret >= 0), "H5Pget_coll_metadata_write succeeded");
VRFY((is_coll == false), "Incorrect property setting for coll metadata writes");
/* Collective metadata read API calling requirement */
ret = H5Pget_all_coll_metadata_ops(fapl_id, &is_coll);
VRFY((ret >= 0), "H5Pget_all_coll_metadata_ops succeeded");
VRFY((is_coll == false), "Incorrect property setting for coll metadata API calls requirement");
ret = H5Fclose(fid);
VRFY((ret >= 0), "H5Fclose succeeded");
/* Open the file with the MPI-IO driver */
ret = H5Pset_fapl_mpio(fapl_id, comm, info);
VRFY((ret >= 0), "H5Pset_fapl_mpio failed");
fid = H5Fopen(filename, H5F_ACC_RDWR, fapl_id);
VRFY((fid != H5I_INVALID_HID), "H5Fopen succeeded");
/* verify settings for file access properties */
/* Collective metadata writes */
ret = H5Pget_coll_metadata_write(fapl_id, &is_coll);
VRFY((ret >= 0), "H5Pget_coll_metadata_write succeeded");
VRFY((is_coll == false), "Incorrect property setting for coll metadata writes");
/* Collective metadata read API calling requirement */
ret = H5Pget_all_coll_metadata_ops(fapl_id, &is_coll);
VRFY((ret >= 0), "H5Pget_all_coll_metadata_ops succeeded");
VRFY((is_coll == false), "Incorrect property setting for coll metadata API calls requirement");
ret = H5Fclose(fid);
VRFY((ret >= 0), "H5Fclose succeeded");
/* Open the file with the MPI-IO driver w/ collective settings */
ret = H5Pset_fapl_mpio(fapl_id, comm, info);
VRFY((ret >= 0), "H5Pset_fapl_mpio failed");
/* Collective metadata writes */
ret = H5Pset_coll_metadata_write(fapl_id, true);
VRFY((ret >= 0), "H5Pget_coll_metadata_write succeeded");
/* Collective metadata read API calling requirement */
ret = H5Pset_all_coll_metadata_ops(fapl_id, true);
VRFY((ret >= 0), "H5Pget_all_coll_metadata_ops succeeded");
fid = H5Fopen(filename, H5F_ACC_RDWR, fapl_id);
VRFY((fid != H5I_INVALID_HID), "H5Fopen succeeded");
/* verify settings for file access properties */
/* Collective metadata writes */
ret = H5Pget_coll_metadata_write(fapl_id, &is_coll);
VRFY((ret >= 0), "H5Pget_coll_metadata_write succeeded");
VRFY((is_coll == true), "Incorrect property setting for coll metadata writes");
/* Collective metadata read API calling requirement */
ret = H5Pget_all_coll_metadata_ops(fapl_id, &is_coll);
VRFY((ret >= 0), "H5Pget_all_coll_metadata_ops succeeded");
VRFY((is_coll == true), "Incorrect property setting for coll metadata API calls requirement");
/* close fapl and retrieve it from file */
ret = H5Pclose(fapl_id);
VRFY((ret >= 0), "H5Pclose succeeded");
fapl_id = H5I_INVALID_HID;
fapl_id = H5Fget_access_plist(fid);
VRFY((fapl_id != H5I_INVALID_HID), "H5P_FILE_ACCESS");
/* verify settings for file access properties */
/* Collective metadata writes */
ret = H5Pget_coll_metadata_write(fapl_id, &is_coll);
VRFY((ret >= 0), "H5Pget_coll_metadata_write succeeded");
VRFY((is_coll == true), "Incorrect property setting for coll metadata writes");
/* Collective metadata read API calling requirement */
ret = H5Pget_all_coll_metadata_ops(fapl_id, &is_coll);
VRFY((ret >= 0), "H5Pget_all_coll_metadata_ops succeeded");
VRFY((is_coll == true), "Incorrect property setting for coll metadata API calls requirement");
/* close file */
ret = H5Fclose(fid);
VRFY((ret >= 0), "H5Fclose succeeded");
/* Release file-access plist */
ret = H5Pclose(fapl_id);
VRFY((ret >= 0), "H5Pclose succeeded");
ret = H5Pclose(fapl_copy_id);
VRFY((ret >= 0), "H5Pclose succeeded");
/* Free the MPI info object */
mpi_ret = MPI_Info_free(&info);
VRFY((mpi_ret >= 0), "MPI_Info_free succeeded");
} /* end test_file_properties() */
void
test_delete(void)
{
hid_t fid = H5I_INVALID_HID; /* HDF5 file ID */
hid_t fapl_id = H5I_INVALID_HID; /* File access plist */
const char *filename = NULL;
MPI_Comm comm = MPI_COMM_WORLD;
MPI_Info info = MPI_INFO_NULL;
htri_t is_accessible = FAIL; /* Whether a file is accessible */
herr_t ret; /* Generic return value */
filename = (const char *)GetTestParameters();
/* set up MPI parameters */
MPI_Comm_size(MPI_COMM_WORLD, &mpi_size);
MPI_Comm_rank(MPI_COMM_WORLD, &mpi_rank);
/* Make sure the connector supports the API functions being tested */
if (!(vol_cap_flags_g & H5VL_CAP_FLAG_FILE_BASIC) || !(vol_cap_flags_g & H5VL_CAP_FLAG_FILE_MORE)) {
if (MAINPROCESS) {
puts("SKIPPED");
printf(" API functions for basic file or file more aren't supported with this "
"connector\n");
fflush(stdout);
}
return;
}
/* setup file access plist */
fapl_id = H5Pcreate(H5P_FILE_ACCESS);
VRFY((fapl_id != H5I_INVALID_HID), "H5Pcreate");
ret = H5Pset_fapl_mpio(fapl_id, comm, info);
VRFY((SUCCEED == ret), "H5Pset_fapl_mpio");
/* create the file */
fid = H5Fcreate(filename, H5F_ACC_TRUNC, H5P_DEFAULT, fapl_id);
VRFY((fid != H5I_INVALID_HID), "H5Fcreate");
/* close the file */
ret = H5Fclose(fid);
VRFY((SUCCEED == ret), "H5Fclose");
/* Verify that the file is an HDF5 file */
is_accessible = H5Fis_accessible(filename, fapl_id);
VRFY((true == is_accessible), "H5Fis_accessible");
/* Delete the file */
ret = H5Fdelete(filename, fapl_id);
VRFY((SUCCEED == ret), "H5Fdelete");
/*
* Work around a Cray MPICH bug that causes
* H5Fis_accessible to re-create the just-deleted
* file as a 0-byte file with strange Unix
* permissions, causing the routine to return
* false here instead of FAIL.
*/
H5Pset_fapl_mpio(fapl_id, comm, info);
/* Verify that the file is NO LONGER an HDF5 file */
/* This should fail since there is no file */
H5E_BEGIN_TRY
{
is_accessible = H5Fis_accessible(filename, fapl_id);
}
H5E_END_TRY
VRFY((FAIL == is_accessible), "H5Fis_accessible failed as expected");
/* Release file-access plist */
ret = H5Pclose(fapl_id);
VRFY((SUCCEED == ret), "H5Pclose");
} /* end test_delete() */
/*
* Tests for an assertion failure during file close that used
* to occur when the library fails to create a file in parallel
* due to an invalid library version bounds setting
*/
void
test_invalid_libver_bounds_file_close_assert(void)
{
const char *filename = NULL;
MPI_Comm comm = MPI_COMM_WORLD;
MPI_Info info = MPI_INFO_NULL;
herr_t ret;
hid_t fid = H5I_INVALID_HID;
hid_t fapl_id = H5I_INVALID_HID;
hid_t fcpl_id = H5I_INVALID_HID;
filename = (const char *)GetTestParameters();
/* set up MPI parameters */
MPI_Comm_size(MPI_COMM_WORLD, &mpi_size);
MPI_Comm_rank(MPI_COMM_WORLD, &mpi_rank);
/* setup file access plist */
fapl_id = H5Pcreate(H5P_FILE_ACCESS);
VRFY((fapl_id != H5I_INVALID_HID), "H5Pcreate");
ret = H5Pset_fapl_mpio(fapl_id, comm, info);
VRFY((SUCCEED == ret), "H5Pset_fapl_mpio");
ret = H5Pset_libver_bounds(fapl_id, H5F_LIBVER_EARLIEST, H5F_LIBVER_V18);
VRFY((SUCCEED == ret), "H5Pset_libver_bounds");
/* setup file creation plist */
fcpl_id = H5Pcreate(H5P_FILE_CREATE);
VRFY((fcpl_id != H5I_INVALID_HID), "H5Pcreate");
ret = H5Pset_file_space_strategy(fcpl_id, H5F_FSPACE_STRATEGY_PAGE, true, 1);
VRFY((SUCCEED == ret), "H5Pset_file_space_strategy");
/* create the file */
H5E_BEGIN_TRY
{
fid = H5Fcreate(filename, H5F_ACC_TRUNC, fcpl_id, fapl_id);
}
H5E_END_TRY
VRFY((fid == H5I_INVALID_HID), "H5Fcreate");
ret = H5Pclose(fapl_id);
VRFY((SUCCEED == ret), "H5Pclose");
ret = H5Pclose(fcpl_id);
VRFY((SUCCEED == ret), "H5Pclose");
}
/*
* Tests that H5Pevict_on_close properly succeeds in serial/one rank and fails when
* called by multiple ranks.
*/
void
test_evict_on_close_parallel_unsupp(void)
{
const char *filename = NULL;
MPI_Comm comm = MPI_COMM_WORLD;
MPI_Info info = MPI_INFO_NULL;
hid_t fid = H5I_INVALID_HID;
hid_t fapl_id = H5I_INVALID_HID;
herr_t ret;
filename = (const char *)GetTestParameters();
/* set up MPI parameters */
MPI_Comm_size(MPI_COMM_WORLD, &mpi_size);
MPI_Comm_rank(MPI_COMM_WORLD, &mpi_rank);
/* setup file access plist */
fapl_id = H5Pcreate(H5P_FILE_ACCESS);
VRFY((fapl_id != H5I_INVALID_HID), "H5Pcreate");
ret = H5Pset_libver_bounds(fapl_id, H5F_LIBVER_EARLIEST, H5F_LIBVER_V18);
VRFY((SUCCEED == ret), "H5Pset_libver_bounds");
ret = H5Pset_evict_on_close(fapl_id, true);
VRFY((SUCCEED == ret), "H5Pset_evict_on_close");
/* test on 1 rank */
ret = H5Pset_fapl_mpio(fapl_id, MPI_COMM_SELF, info);
VRFY((SUCCEED == ret), "H5Pset_fapl_mpio");
if (mpi_rank == 0) {
fid = H5Fcreate(filename, H5F_ACC_TRUNC, H5P_DEFAULT, fapl_id);
VRFY((SUCCEED == ret), "H5Fcreate");
ret = H5Fclose(fid);
VRFY((SUCCEED == ret), "H5Fclose");
}
VRFY((MPI_SUCCESS == MPI_Barrier(MPI_COMM_WORLD)), "MPI_Barrier");
/* test on multiple ranks if we have them */
if (mpi_size > 1) {
ret = H5Pset_fapl_mpio(fapl_id, comm, info);
VRFY((SUCCEED == ret), "H5Pset_fapl_mpio");
H5E_BEGIN_TRY
{
fid = H5Fcreate(filename, H5F_ACC_TRUNC, H5P_DEFAULT, fapl_id);
}
H5E_END_TRY
VRFY((fid == H5I_INVALID_HID), "H5Fcreate");
}
ret = H5Pclose(fapl_id);
VRFY((SUCCEED == ret), "H5Pclose");
}
/*
* Verify that MPI I/O hints are preserved after closing the file access property list
* as described in issue #3025
* This is a test program from the user.
*/
void
test_fapl_preserve_hints(void)
{
const char *filename;
const char *key = "hdf_info_fapl";
const char *value = "xyz";
MPI_Info info_used = MPI_INFO_NULL;
MPI_Info info = MPI_INFO_NULL;
hid_t fid = H5I_INVALID_HID; /* HDF5 file ID */
hid_t fapl_id = H5I_INVALID_HID; /* File access plist */
char key_used[MPI_MAX_INFO_KEY + 1];
char *value_used = NULL;
bool same = false;
int flag = -1;
int nkeys_used;
int i;
int mpi_ret; /* MPI return value */
herr_t ret; /* Generic return value */
filename = (const char *)GetTestParameters();
value_used = malloc(MPI_MAX_INFO_VAL + 1);
VRFY(value_used, "malloc succeeded");
/* set up MPI parameters */
mpi_ret = MPI_Info_create(&info);
VRFY((mpi_ret >= 0), "MPI_Info_create succeeded");
mpi_ret = MPI_Info_set(info, key, value);
VRFY((mpi_ret == MPI_SUCCESS), "MPI_Info_set succeeded");
fapl_id = H5Pcreate(H5P_FILE_ACCESS);
VRFY((fapl_id != H5I_INVALID_HID), "H5Pcreate");
ret = H5Pset_fapl_mpio(fapl_id, MPI_COMM_WORLD, info);
VRFY((ret >= 0), "H5Pset_fapl_mpio");
fid = H5Fcreate(filename, H5F_ACC_TRUNC, H5P_DEFAULT, fapl_id);
VRFY((fid != H5I_INVALID_HID), "H5Fcreate succeeded");
ret = H5Pclose(fapl_id);
VRFY((ret >= 0), "H5Pclose succeeded");
fapl_id = H5Fget_access_plist(fid);
VRFY((fapl_id != H5I_INVALID_HID), "H5Fget_access_plist succeeded");
ret = H5Pget_fapl_mpio(fapl_id, NULL, &info_used);
VRFY((ret >= 0), "H5Pget_fapl_mpio succeeded");
VRFY((info_used != MPI_INFO_NULL), "H5Pget_fapl_mpio");
mpi_ret = MPI_Info_get_nkeys(info_used, &nkeys_used);
VRFY((mpi_ret == MPI_SUCCESS), "MPI_Info_get_nkeys succeeded");
/* Loop over the # of keys */
for (i = 0; i < nkeys_used; i++) {
/* Memset the buffers to zero */
memset(key_used, 0, MPI_MAX_INFO_KEY + 1);
memset(value_used, 0, MPI_MAX_INFO_VAL + 1);
/* Get the nth key */
mpi_ret = MPI_Info_get_nthkey(info_used, i, key_used);
VRFY((mpi_ret == MPI_SUCCESS), "MPI_Info_get_nthkey succeeded");
if (!strcmp(key_used, key)) {
mpi_ret = MPI_Info_get(info_used, key_used, MPI_MAX_INFO_VAL, value_used, &flag);
VRFY((mpi_ret == MPI_SUCCESS), "MPI_Info_get succeeded");
if (!strcmp(value_used, value)) {
/* Both key_used and value_used are the same */
same = true;
break;
}
}
} /* end for */
VRFY((same == true), "key_used and value_used are the same");
ret = H5Pclose(fapl_id);
VRFY((ret >= 0), "H5Pclose succeeded");
ret = H5Fclose(fid);
VRFY((ret >= 0), "H5Fclose succeeded");
/* Free the MPI info object */
mpi_ret = MPI_Info_free(&info);
VRFY((mpi_ret >= 0), "MPI_Info_free succeeded");
mpi_ret = MPI_Info_free(&info_used);
VRFY((mpi_ret >= 0), "MPI_Info_free succeeded");
free(value_used);
} /* end test_fapl_preserve_hints() */
Reference in New Issue View Git Blame Copy Permalink