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* commit '54957d37f5aa73912763dbb6e308555e863c43f4': Commit copyright header change for src/H5PLpkg.c which was added after running script to make changes. Add new files in release_docs to MANIFEST. Cimmit changes to Makefile.in(s) and H5PL.c that resulted from running autogen.sh. Merge pull request #407 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10_1 to hdf5_1_10_1 Change copyright headers to replace url referring to file to be removed and replace it with new url for COPYING file.
714 lines
24 KiB
C
714 lines
24 KiB
C
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
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* Copyright by The HDF Group. *
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* Copyright by the Board of Trustees of the University of Illinois. *
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* All rights reserved. *
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* *
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* This file is part of HDF5. The full HDF5 copyright notice, including *
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* terms governing use, modification, and redistribution, is contained in *
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* the COPYING file, which can be found at the root of the source code *
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* distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. *
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* If you do not have access to either file, you may request a copy from *
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* help@hdfgroup.org. *
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* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
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/*-------------------------------------------------------------------------
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*
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* Created: swmr_start_write.c
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*
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* Purpose: This program enables SWMR writing mode via H5Fstart_swmr_write().
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* It writes data to a randomly selected subset of the datasets
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* in the SWMR test file; and it is intended to run concurrently
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* with the swmr_reader program.
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*
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* NOTE: The routines in this program are basically copied and modified from
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* swmr*.c.
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*-------------------------------------------------------------------------
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*/
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/***********/
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/* Headers */
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/***********/
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#include "h5test.h"
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#include "swmr_common.h"
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/********************/
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/* Local Prototypes */
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/********************/
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static hid_t create_file(const char *filename, hbool_t verbose,
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FILE *verbose_file, unsigned random_seed);
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static int create_datasets(hid_t fid, int comp_level, hbool_t verbose,
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FILE *verbose_file, const char *index_type);
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static int create_close_datasets(hid_t fid, int comp_level, hbool_t verbose,
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FILE *verbose_file);
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static int open_datasets(hid_t fid, hbool_t verbose, FILE *verbose_file);
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static hid_t open_file(const char *filename, hbool_t verbose,
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FILE *verbose_file);
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static int add_records(hid_t fid, hbool_t verbose, FILE *verbose_file,
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unsigned long nrecords, unsigned long flush_count);
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static void usage(void);
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#define CHUNK_SIZE 50 /* Chunk size for created datasets */
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/*-------------------------------------------------------------------------
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* Function: create_file
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*
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* Purpose: Creates the HDF5 file (without SWMR access) which
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* which will be used for testing H5Fstart_swmr_write().
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*
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* Parameters:
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* filename: The SWMR test file's name.
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* verbose: whether verbose console output is desired.
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* verbose_file: file pointer for verbose output
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* random_seed: The random seed to store in the file.
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* The sparse tests use this value.
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*
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* Return: Success: the file ID
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* Failure: -1
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*
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*-------------------------------------------------------------------------
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*/
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static hid_t
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create_file(const char *filename, hbool_t verbose, FILE *verbose_file,
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unsigned random_seed)
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{
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hid_t fid; /* File ID for new HDF5 file */
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hid_t fcpl; /* File creation property list */
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hid_t fapl; /* File access property list */
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hid_t sid; /* Dataspace ID */
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hid_t aid; /* Attribute ID */
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HDassert(filename);
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/* Create file access property list */
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if((fapl = h5_fileaccess()) < 0)
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return -1;
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/* We ALWAYS select the latest file format for SWMR */
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if(H5Pset_libver_bounds(fapl, H5F_LIBVER_LATEST, H5F_LIBVER_LATEST) < 0)
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return -1;
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#ifdef QAK
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if(verbose) {
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char verbose_name[1024];
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HDsnprintf(verbose_name, sizeof(verbose_name), "swmr_start_write.log.%u", random_seed);
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H5Pset_fapl_log(fapl, verbose_name, H5FD_LOG_ALL, (size_t)(512 * 1024 * 1024));
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} /* end if */
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#endif /* QAK */
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/* Create file creation property list */
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if((fcpl = H5Pcreate(H5P_FILE_CREATE)) < 0)
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return -1;
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/* Emit informational message */
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if(verbose)
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HDfprintf(verbose_file, "Creating file without SWMR access\n");
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/* Create the file */
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if((fid = H5Fcreate(filename, H5F_ACC_TRUNC, fcpl, fapl)) < 0)
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return -1;
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/* Close file creation property list */
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if(H5Pclose(fcpl) < 0)
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return -1;
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/* Close file access property list */
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if(H5Pclose(fapl) < 0)
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return -1;
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/* Create attribute with (shared) random number seed - for sparse test */
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if((sid = H5Screate(H5S_SCALAR)) < 0)
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return -1;
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if((aid = H5Acreate2(fid, "seed", H5T_NATIVE_UINT, sid, H5P_DEFAULT, H5P_DEFAULT)) < 0)
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return -1;
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if(H5Awrite(aid, H5T_NATIVE_UINT, &random_seed) < 0)
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return -1;
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if(H5Sclose(sid) < 0)
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return -1;
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if(H5Aclose(aid) < 0)
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return -1;
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return fid;
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} /* end create_file() */
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/*-------------------------------------------------------------------------
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* Function: create_datasets
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*
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* Purpose: Create datasets (and keep them opened) which will be used for testing
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* H5Fstart_swmr_write().
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*
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* Parameters:
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* fid: file ID for the SWMR test file
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* comp_level: the compresssion level
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* index_type: The chunk index type (b1 | b2 | ea | fa)
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* verbose: whether verbose console output is desired.
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* verbose_file: file pointer for verbose output
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*
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* Return: Success: 0
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* Failure: -1
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*
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*-------------------------------------------------------------------------
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*/
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static int
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create_datasets(hid_t fid, int comp_level, hbool_t verbose, FILE *verbose_file,
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const char *index_type)
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{
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hid_t dcpl; /* Dataset creation property list */
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hid_t tid; /* Datatype for dataset elements */
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hid_t sid; /* Dataspace ID */
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hsize_t dims[2] = {1, 0}; /* Dataset starting dimensions */
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hsize_t max_dims[2] = {1, H5S_UNLIMITED}; /* Dataset maximum dimensions */
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hsize_t chunk_dims[2] = {1, CHUNK_SIZE}; /* Chunk dimensions */
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unsigned u, v; /* Local index variable */
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HDassert(index_type);
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/* Create datatype for creating datasets */
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if((tid = create_symbol_datatype()) < 0)
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return -1;
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/* There are two chunk indexes tested here.
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* With one unlimited dimension, we get the extensible array index
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* type, with two unlimited dimensions, we get a v-2 B-tree.
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*/
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if(!HDstrcmp(index_type, "b2"))
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max_dims[0] = H5S_UNLIMITED;
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/* Create dataspace for creating datasets */
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if((sid = H5Screate_simple(2, dims, max_dims)) < 0)
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return -1;
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/* Create dataset creation property list */
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if((dcpl = H5Pcreate(H5P_DATASET_CREATE)) < 0)
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return -1;
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if(H5Pset_chunk(dcpl, 2, chunk_dims) < 0)
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return -1;
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if(comp_level >= 0) {
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if(H5Pset_deflate(dcpl, (unsigned)comp_level) < 0)
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return -1;
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} /* end if */
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/* Emit informational message */
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if(verbose)
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HDfprintf(verbose_file, "Creating datasets\n");
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/* Create the datasets */
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for(u = 0; u < NLEVELS; u++)
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for(v = 0; v < symbol_count[u]; v++) {
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if((symbol_info[u][v].dsid = H5Dcreate2(fid, symbol_info[u][v].name, tid, sid, H5P_DEFAULT, dcpl, H5P_DEFAULT)) < 0)
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return -1;
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symbol_info[u][v].nrecords = 0;
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} /* end for */
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return 0;
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} /* create_datasets() */
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/*-------------------------------------------------------------------------
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* Function: create_close_datasets
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*
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* Purpose: Create and close datasets which will be used for testing
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* H5Fstart_swmr_write().
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*
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* Parameters:
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* fid: file ID for the SWMR test file
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* comp_level: the compresssion level
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* verbose: whether verbose console output is desired.
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* verbose_file: file pointer for verbose output
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*
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* Return: Success: 0
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* Failure: -1
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*
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*-------------------------------------------------------------------------
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*/
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static int
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create_close_datasets(hid_t fid, int comp_level, hbool_t verbose, FILE *verbose_file)
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{
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hid_t dcpl; /* Dataset creation property list */
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hid_t tid; /* Datatype for dataset elements */
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hid_t sid; /* Dataspace ID */
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hsize_t dims[2] = {1, 0}; /* Dataset starting dimensions */
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hsize_t max_dims[2] = {1, H5S_UNLIMITED}; /* Dataset maximum dimensions */
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hsize_t chunk_dims[2] = {1, CHUNK_SIZE}; /* Chunk dimensions */
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unsigned u, v; /* Local index variable */
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/* Create datatype for creating datasets */
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if((tid = create_symbol_datatype()) < 0)
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return -1;
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/* Create dataspace for creating datasets */
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if((sid = H5Screate_simple(2, dims, max_dims)) < 0)
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return -1;
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/* Create dataset creation property list */
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if((dcpl = H5Pcreate(H5P_DATASET_CREATE)) < 0)
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return -1;
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if(H5Pset_chunk(dcpl, 2, chunk_dims) < 0)
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return -1;
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if(comp_level >= 0) {
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if(H5Pset_deflate(dcpl, (unsigned)comp_level) < 0)
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return -1;
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} /* end if */
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/* Emit informational message */
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if(verbose)
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HDfprintf(verbose_file, "Creating datasets\n");
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/* Create the datasets */
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for(u = 0; u < NLEVELS; u++)
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for(v = 0; v < symbol_count[u]; v++) {
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hid_t dsid; /* Dataset ID */
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char name_buf[64];
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generate_name(name_buf, u, v);
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if((dsid = H5Dcreate2(fid, name_buf, tid, sid, H5P_DEFAULT, dcpl, H5P_DEFAULT)) < 0)
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return -1;
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if(H5Dclose(dsid) < 0)
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return -1;
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} /* end for */
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/* Closing */
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if(H5Pclose(dcpl) < 0)
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return -1;
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if(H5Sclose(sid) < 0)
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return -1;
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if(H5Tclose(tid) < 0)
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return -1;
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return 0;
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} /* create_close_datasets() */
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/*-------------------------------------------------------------------------
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* Function: open_file
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*
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* Purpose: Opens the HDF5 test file without SWMR access.
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*
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* Parameters:
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* filename: The filename of the HDF5 file to open
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* verbose: whether or not to emit verbose console messages
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* verbose_file: file pointer for verbose output
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*
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* Return: Success: The file ID of the opened SWMR file
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* Failure: -1
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*
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*-------------------------------------------------------------------------
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*/
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static hid_t
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open_file(const char *filename, hbool_t verbose, FILE *verbose_file)
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{
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hid_t fid; /* File ID for new HDF5 file */
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hid_t fapl; /* File access property list */
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HDassert(filename);
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/* Create file access property list */
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if((fapl = h5_fileaccess()) < 0)
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return -1;
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/* Set to use the latest library format */
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if(H5Pset_libver_bounds(fapl, H5F_LIBVER_LATEST, H5F_LIBVER_LATEST) < 0)
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return -1;
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/* Emit informational message */
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if(verbose)
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HDfprintf(verbose_file, "Opening the file without SWMR access: %s\n", filename);
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/* Open the file */
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if((fid = H5Fopen(filename, H5F_ACC_RDWR, fapl)) < 0)
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return -1;
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/* Close file access property list */
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if(H5Pclose(fapl) < 0)
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return -1;
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return fid;
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} /* Open file() */
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/*-------------------------------------------------------------------------
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* Function: open_datasets
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*
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* Purpose: Opens the datasets.
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*
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* Parameters:
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* filename: the filename of the SWMR HDF5 file to open
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* verbose: whether or not to emit verbose console messages
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* verbose_file: file pointer for verbose output
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*
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* Return: Success: 0
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* Failure: -1
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*
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*-------------------------------------------------------------------------
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*/
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static int
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open_datasets(hid_t fid, hbool_t verbose, FILE *verbose_file)
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{
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unsigned u, v; /* Local index variable */
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/* Emit informational message */
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if(verbose)
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HDfprintf(verbose_file, "Opening datasets\n");
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/* Open the datasets */
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for(u = 0; u < NLEVELS; u++)
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for(v = 0; v < symbol_count[u]; v++) {
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if((symbol_info[u][v].dsid = H5Dopen2(fid, symbol_info[u][v].name, H5P_DEFAULT)) < 0)
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return -1;
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symbol_info[u][v].nrecords = 0;
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} /* end for */
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return 0;
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} /* open_datasets() */
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/*-------------------------------------------------------------------------
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* Function: add_records
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*
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* Purpose: Writes a specified number of records to random datasets in
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* the SWMR test file.
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*
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* Parameters:
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* fid: The file ID of the SWMR HDF5 file
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* verbose: Whether or not to emit verbose console messages
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* verbose_file: file pointer for verbose output
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* nrecords: # of records to write to the datasets
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* flush_count: # of records to write before flushing the file to disk
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*
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* Return: Success: 0
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* Failure: -1
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*
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*-------------------------------------------------------------------------
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*/
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static int
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add_records(hid_t fid, hbool_t verbose, FILE *verbose_file,
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unsigned long nrecords, unsigned long flush_count)
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{
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hid_t tid; /* Datatype ID for records */
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hid_t mem_sid; /* Memory dataspace ID */
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hsize_t start[2] = {0, 0}, count[2] = {1, 1}; /* Hyperslab selection values */
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hsize_t dim[2] = {1, 0}; /* Dataspace dimensions */
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symbol_t record; /* The record to add to the dataset */
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unsigned long rec_to_flush; /* # of records left to write before flush */
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unsigned long u, v; /* Local index variables */
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HDassert(fid >= 0);
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/* Reset the record */
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/* (record's 'info' field might need to change for each record written, also) */
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HDmemset(&record, 0, sizeof(record));
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/* Create a dataspace for the record to add */
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if((mem_sid = H5Screate(H5S_SCALAR)) < 0)
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return -1;
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/* Create datatype for appending records */
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if((tid = create_symbol_datatype()) < 0)
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return -1;
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/* Add records to random datasets, according to frequency distribution */
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rec_to_flush = flush_count;
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for(u = 0; u < nrecords; u++) {
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symbol_info_t *symbol; /* Symbol to write record to */
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hid_t file_sid; /* Dataset's space ID */
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/* Get a random dataset, according to the symbol distribution */
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symbol = choose_dataset();
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/* Set the record's ID (equal to its position) */
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record.rec_id = symbol->nrecords;
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/* Get the coordinate to write */
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start[1] = symbol->nrecords;
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/* Cork the metadata cache, to prevent the object header from being
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* flushed before the data has been written */
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if(H5Odisable_mdc_flushes(symbol->dsid) < 0)
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return -1;
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/* Extend the dataset's dataspace to hold the new record */
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symbol->nrecords++;
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dim[1] = symbol->nrecords;
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if(H5Dset_extent(symbol->dsid, dim) < 0)
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return -1;
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/* Get the dataset's dataspace */
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if((file_sid = H5Dget_space(symbol->dsid)) < 0)
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return -1;
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/* Choose the last record in the dataset */
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if(H5Sselect_hyperslab(file_sid, H5S_SELECT_SET, start, NULL, count, NULL) < 0)
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return -1;
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/* Write record to the dataset */
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if(H5Dwrite(symbol->dsid, tid, mem_sid, file_sid, H5P_DEFAULT, &record) < 0)
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return -1;
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/* Uncork the metadata cache */
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if(H5Oenable_mdc_flushes(symbol->dsid) < 0)
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return -1;
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/* Close the dataset's dataspace */
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if(H5Sclose(file_sid) < 0)
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return -1;
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/* Check for flushing file */
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if(flush_count > 0) {
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/* Decrement count of records to write before flushing */
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rec_to_flush--;
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/* Check for counter being reached */
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if(0 == rec_to_flush) {
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/* Flush contents of file */
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if(H5Fflush(fid, H5F_SCOPE_GLOBAL) < 0)
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return -1;
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/* Reset flush counter */
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rec_to_flush = flush_count;
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} /* end if */
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} /* end if */
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} /* end for */
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/* Close the memory dataspace */
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if(H5Sclose(mem_sid) < 0)
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return -1;
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/* Close the datatype */
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if(H5Tclose(tid) < 0)
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return -1;
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/* Emit informational message */
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if(verbose)
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HDfprintf(verbose_file, "Closing datasets\n");
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/* Close the datasets */
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for(u = 0; u < NLEVELS; u++)
|
||
for(v = 0; v < symbol_count[u]; v++)
|
||
if(H5Dclose(symbol_info[u][v].dsid) < 0)
|
||
return -1;
|
||
|
||
return 0;
|
||
} /* add_records() */
|
||
|
||
static void
|
||
usage(void)
|
||
{
|
||
printf("\n");
|
||
printf("Usage error!\n");
|
||
printf("\n");
|
||
printf("Usage: swmr_start_write [-f <# of records to write between flushing file contents>]\n");
|
||
printf(" [-i <index type>] [-c <deflate compression level>]\n");
|
||
printf(" [-r <random seed>] [-q] <# of records>\n");
|
||
printf("\n");
|
||
printf("<# of records to write between flushing file contents> should be 0\n");
|
||
printf("(for no flushing) or between 1 and (<# of records> - 1).\n");
|
||
printf("\n");
|
||
printf("<index type> should be b2 or ea\n");
|
||
printf("\n");
|
||
printf("<deflate compression level> should be -1 (for no compression) or 0-9\n");
|
||
printf("\n");
|
||
printf("<# of records> must be specified.\n");
|
||
printf("\n");
|
||
printf("Defaults to flushing every 10000 records ('-f 10000'),\n");
|
||
printf("v1 b-tree indexing (-i b1), compression ('-c -1'),\n");
|
||
printf("will generate a random seed (no -r given), and verbose (no '-q' given)\n");
|
||
printf("\n");
|
||
HDexit(1);
|
||
} /* usage() */
|
||
|
||
/*
|
||
* Can test with different scenarios as below:
|
||
* 1) create_file(), create_datasets(), H5Fstart_swmr_write(), add_records(), H5Fclose().
|
||
* 2) create_file(), create_close_datasets(), open_datasets(), H5Fstart_swmr_write(), add_records(), H5Fclose().
|
||
* 3) create_file(), create_close_datasets(), H5Fclose(),
|
||
* open_file(), open_dataset(), H5Fstart_swmr_write(), add_records(), H5Fclose().
|
||
*/
|
||
int main(int argc, const char *argv[])
|
||
{
|
||
hid_t fid; /* File ID for file opened */
|
||
long nrecords = 0; /* # of records to append */
|
||
long flush_count = 10000; /* # of records to write between flushing file */
|
||
hbool_t verbose = TRUE; /* Whether to emit some informational messages */
|
||
FILE *verbose_file = NULL; /* File handle for verbose output */
|
||
hbool_t use_seed = FALSE; /* Set to TRUE if a seed was set on the command line */
|
||
unsigned random_seed = 0; /* Random # seed */
|
||
int comp_level = -1; /* Compression level (-1 is no compression) */
|
||
const char *index_type = "b1"; /* Chunk index type */
|
||
unsigned u; /* Local index variable */
|
||
int temp; /* Temporary variable */
|
||
|
||
/* Parse command line options */
|
||
if(argc < 2)
|
||
usage();
|
||
if(argc > 1) {
|
||
u = 1;
|
||
while(u < (unsigned)argc) {
|
||
if(argv[u][0] == '-') {
|
||
switch(argv[u][1]) {
|
||
/* Compress dataset chunks */
|
||
case 'c':
|
||
comp_level = HDatoi(argv[u + 1]);
|
||
if(comp_level < -1 || comp_level > 9)
|
||
usage();
|
||
u += 2;
|
||
break;
|
||
|
||
/* Chunk index type */
|
||
case 'i':
|
||
index_type = argv[u + 1];
|
||
if(HDstrcmp(index_type, "ea")
|
||
&& HDstrcmp(index_type, "b2"))
|
||
usage();
|
||
u += 2;
|
||
break;
|
||
|
||
/* # of records to write between flushing file */
|
||
case 'f':
|
||
flush_count = HDatol(argv[u + 1]);
|
||
if(flush_count < 0)
|
||
usage();
|
||
u += 2;
|
||
break;
|
||
|
||
/* Be quiet */
|
||
case 'q':
|
||
verbose = FALSE;
|
||
u++;
|
||
break;
|
||
|
||
/* Random # seed */
|
||
case 'r':
|
||
use_seed = TRUE;
|
||
temp = HDatoi(argv[u + 1]);
|
||
if(temp < 0)
|
||
usage();
|
||
else
|
||
random_seed = (unsigned)temp;
|
||
u += 2;
|
||
break;
|
||
|
||
default:
|
||
usage();
|
||
break;
|
||
} /* end switch */
|
||
} /* end if */
|
||
else {
|
||
/* Get the number of records to append */
|
||
nrecords = HDatol(argv[u]);
|
||
if(nrecords <= 0)
|
||
usage();
|
||
|
||
u++;
|
||
} /* end else */
|
||
} /* end while */
|
||
} /* end if */
|
||
|
||
if(nrecords <= 0)
|
||
usage();
|
||
if(flush_count >= nrecords)
|
||
usage();
|
||
|
||
/* Set the random seed */
|
||
if(!use_seed) {
|
||
struct timeval t;
|
||
|
||
HDgettimeofday(&t, NULL);
|
||
random_seed = (unsigned)(t.tv_usec);
|
||
} /* end if */
|
||
HDsrandom(random_seed);
|
||
|
||
/* Open output file */
|
||
if(verbose) {
|
||
char verbose_name[1024];
|
||
|
||
HDsnprintf(verbose_name, sizeof(verbose_name), "swmr_writer.out.%u", random_seed);
|
||
if(NULL == (verbose_file = HDfopen(verbose_name, "w"))) {
|
||
HDfprintf(stderr, "Can't open verbose output file!\n");
|
||
HDexit(1);
|
||
}
|
||
} /* end if */
|
||
|
||
/* Emit informational message */
|
||
if(verbose) {
|
||
HDfprintf(verbose_file, "Parameters:\n");
|
||
HDfprintf(verbose_file, "\tindex type = %s\n", index_type);
|
||
HDfprintf(verbose_file, "\tcompression level = %d\n", comp_level);
|
||
HDfprintf(verbose_file, "\t# of records between flushes = %ld\n", flush_count);
|
||
HDfprintf(verbose_file, "\t# of records to write = %ld\n", nrecords);
|
||
} /* end if */
|
||
|
||
/* ALWAYS emit the random seed for possible debugging */
|
||
HDfprintf(stdout, "Using writer random seed: %u\n", random_seed);
|
||
|
||
/* Create the test file */
|
||
if((fid = create_file(FILENAME, verbose, verbose_file, random_seed)) < 0) {
|
||
HDfprintf(stderr, "Error creating the file...\n");
|
||
HDexit(1);
|
||
}
|
||
|
||
/* Emit informational message */
|
||
if(verbose)
|
||
HDfprintf(verbose_file, "Generating symbol names\n");
|
||
|
||
/* Generate dataset names */
|
||
if(generate_symbols() < 0)
|
||
return -1;
|
||
|
||
/* Create the datasets in the file */
|
||
if(create_datasets(fid, comp_level, verbose, verbose_file, index_type) < 0) {
|
||
HDfprintf(stderr, "Error creating datasets...\n");
|
||
HDexit(1);
|
||
}
|
||
|
||
/* Enable SWMR writing mode */
|
||
if(H5Fstart_swmr_write(fid) < 0) {
|
||
HDfprintf(stderr, "Error starting SWMR writing mode...\n");
|
||
HDexit(1);
|
||
}
|
||
|
||
/* Send a message to indicate "H5Fopen" is complete--releasing the file lock */
|
||
h5_send_message(WRITER_MESSAGE, NULL, NULL);
|
||
|
||
/* Emit informational message */
|
||
if(verbose)
|
||
HDfprintf(verbose_file, "Adding records\n");
|
||
|
||
/* Append records to datasets */
|
||
if(add_records(fid, verbose, verbose_file, (unsigned long)nrecords, (unsigned long)flush_count) < 0) {
|
||
HDfprintf(stderr, "Error appending records to datasets!\n");
|
||
HDexit(1);
|
||
} /* end if */
|
||
|
||
/* Emit informational message */
|
||
if(verbose)
|
||
HDfprintf(verbose_file, "Releasing symbols\n");
|
||
|
||
/* Clean up the symbols */
|
||
if(shutdown_symbols() < 0) {
|
||
HDfprintf(stderr, "Error releasing symbols!\n");
|
||
HDexit(1);
|
||
} /* end if */
|
||
|
||
/* Emit informational message */
|
||
if(verbose)
|
||
HDfprintf(verbose_file, "Closing the file\n");
|
||
|
||
/* Close objects opened */
|
||
if(H5Fclose(fid) < 0) {
|
||
HDfprintf(stderr, "Error closing file!\n");
|
||
HDexit(1);
|
||
} /* end if */
|
||
|
||
return 0;
|
||
} /* main() */
|
||
|