mirror of
https://github.com/HDFGroup/hdf5.git
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a6f6462541
File format is not stable, don't keep files produced!
Description:
First stage of checkins modifying the format of groups to support creation
order. Implement "dense" storage for links in groups.
Try to clarify some of the symbols for the H5L API.
Add the H5Pset_latest_format() flag for FAPLs, to choose to use the newest
file format options (including "dense" link storage in groups)
Add the H5Pset_track_creation_order() flag for GCPLs, to enable creation
order tracking in groups (although no index on creation order yet).
Remove --enable-group-revision configure flag, as file format issues are
now handled in a backwardly/forwardly compatible way.
Clean up lots of compiler warnings and other minor formatting issues.
Tested on:
FreeBSD/32 4.11 (sleipnir) w/threadsafe
Linux/32 2.4 (heping) w/FORTRAN & C++
Linux/64 2.4 (mir) w/enable-v1.6 compa
Mac OSX/32 10.4.8 (amazon)
AIX 5.3 (copper) w/parallel & FORTRAN
207 lines
8.9 KiB
XML
207 lines
8.9 KiB
XML
#############################
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Expected output for 'h5dump --xml tall.h5'
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#############################
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<?xml version="1.0" encoding="UTF-8"?>
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<hdf5:HDF5-File xmlns:hdf5="http://hdf.ncsa.uiuc.edu/DTDs/HDF5-File" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://hdf.ncsa.uiuc.edu/DTDs/HDF5File http://hdf.ncsa.uiuc.edu/DTDs/HDF5-File.xsd">
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<hdf5:RootGroup OBJ-XID="xid_96" H5Path="/">
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<hdf5:Attribute Name="attr1">
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<hdf5:Dataspace>
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<hdf5:SimpleDataspace Ndims="1">
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<hdf5:Dimension DimSize="10" MaxDimSize="10"/>
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</hdf5:SimpleDataspace>
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</hdf5:Dataspace>
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<hdf5:DataType>
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<hdf5:AtomicType>
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<hdf5:IntegerType ByteOrder="BE" Sign="true" Size="1" />
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</hdf5:AtomicType>
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</hdf5:DataType>
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<hdf5:Data>
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<hdf5:DataFromFile>
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97 98 99 100 101 102 103 104 105 0
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</hdf5:DataFromFile>
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</hdf5:Data>
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</hdf5:Attribute>
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<hdf5:Attribute Name="attr2">
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<hdf5:Dataspace>
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<hdf5:SimpleDataspace Ndims="2">
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<hdf5:Dimension DimSize="2" MaxDimSize="2"/>
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<hdf5:Dimension DimSize="2" MaxDimSize="2"/>
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</hdf5:SimpleDataspace>
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</hdf5:Dataspace>
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<hdf5:DataType>
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<hdf5:AtomicType>
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<hdf5:IntegerType ByteOrder="BE" Sign="true" Size="4" />
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</hdf5:AtomicType>
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</hdf5:DataType>
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<hdf5:Data>
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<hdf5:DataFromFile>
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0 1
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2 3
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</hdf5:DataFromFile>
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</hdf5:Data>
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</hdf5:Attribute>
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<hdf5:Group Name="g1" OBJ-XID="xid_808" H5Path="/g1" Parents="xid_96" H5ParentPaths="/" >
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<hdf5:Group Name="g1.1" OBJ-XID="xid_2560" H5Path="/g1/g1.1" Parents="xid_808" H5ParentPaths="/g1" >
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<hdf5:Dataset Name="dset1.1.1" OBJ-XID="xid_5528" H5Path= "/g1/g1.1/dset1.1.1" Parents="xid_2560" H5ParentPaths="/g1/g1.1">
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<hdf5:StorageLayout>
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<hdf5:ContiguousLayout/>
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</hdf5:StorageLayout>
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<hdf5:FillValueInfo FillTime="FillIfSet" AllocationTime="Late">
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<hdf5:FillValue>
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<hdf5:NoFill/>
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</hdf5:FillValue>
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</hdf5:FillValueInfo>
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<hdf5:Dataspace>
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<hdf5:SimpleDataspace Ndims="2">
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<hdf5:Dimension DimSize="10" MaxDimSize="10"/>
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<hdf5:Dimension DimSize="10" MaxDimSize="10"/>
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</hdf5:SimpleDataspace>
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</hdf5:Dataspace>
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<hdf5:DataType>
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<hdf5:AtomicType>
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<hdf5:IntegerType ByteOrder="BE" Sign="true" Size="4" />
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</hdf5:AtomicType>
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</hdf5:DataType>
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<hdf5:Attribute Name="attr1">
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<hdf5:Dataspace>
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<hdf5:SimpleDataspace Ndims="1">
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<hdf5:Dimension DimSize="27" MaxDimSize="27"/>
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</hdf5:SimpleDataspace>
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</hdf5:Dataspace>
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<hdf5:DataType>
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<hdf5:AtomicType>
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<hdf5:IntegerType ByteOrder="BE" Sign="true" Size="1" />
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</hdf5:AtomicType>
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</hdf5:DataType>
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<hdf5:Data>
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<hdf5:DataFromFile>
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49 115 116 32 97 116 116 114 105 98 117 116 101 32 111 102 32
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100 115 101 116 49 46 49 46 49 0
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</hdf5:DataFromFile>
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</hdf5:Data>
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</hdf5:Attribute>
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<hdf5:Attribute Name="attr2">
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<hdf5:Dataspace>
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<hdf5:SimpleDataspace Ndims="1">
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<hdf5:Dimension DimSize="27" MaxDimSize="27"/>
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</hdf5:SimpleDataspace>
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</hdf5:Dataspace>
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<hdf5:DataType>
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<hdf5:AtomicType>
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<hdf5:IntegerType ByteOrder="BE" Sign="true" Size="1" />
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</hdf5:AtomicType>
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</hdf5:DataType>
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<hdf5:Data>
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<hdf5:DataFromFile>
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50 110 100 32 97 116 116 114 105 98 117 116 101 32 111 102 32
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100 115 101 116 49 46 49 46 49 0
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</hdf5:DataFromFile>
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</hdf5:Data>
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</hdf5:Attribute>
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<hdf5:Data>
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<hdf5:DataFromFile>
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0 0 0 0 0 0 0 0 0 0
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0 1 2 3 4 5 6 7 8 9
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0 2 4 6 8 10 12 14 16 18
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0 3 6 9 12 15 18 21 24 27
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0 4 8 12 16 20 24 28 32 36
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0 5 10 15 20 25 30 35 40 45
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0 6 12 18 24 30 36 42 48 54
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0 7 14 21 28 35 42 49 56 63
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0 8 16 24 32 40 48 56 64 72
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0 9 18 27 36 45 54 63 72 81
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</hdf5:DataFromFile>
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</hdf5:Data>
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</hdf5:Dataset>
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<hdf5:Dataset Name="dset1.1.2" OBJ-XID="xid_8272" H5Path= "/g1/g1.1/dset1.1.2" Parents="xid_2560" H5ParentPaths="/g1/g1.1">
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<hdf5:StorageLayout>
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<hdf5:ContiguousLayout/>
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</hdf5:StorageLayout>
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<hdf5:FillValueInfo FillTime="FillIfSet" AllocationTime="Late">
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<hdf5:FillValue>
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<hdf5:NoFill/>
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</hdf5:FillValue>
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</hdf5:FillValueInfo>
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<hdf5:Dataspace>
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<hdf5:SimpleDataspace Ndims="1">
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<hdf5:Dimension DimSize="20" MaxDimSize="20"/>
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</hdf5:SimpleDataspace>
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</hdf5:Dataspace>
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<hdf5:DataType>
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<hdf5:AtomicType>
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<hdf5:IntegerType ByteOrder="BE" Sign="true" Size="4" />
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</hdf5:AtomicType>
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</hdf5:DataType>
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<hdf5:Data>
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<hdf5:DataFromFile>
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0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19
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</hdf5:DataFromFile>
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</hdf5:Data>
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</hdf5:Dataset>
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</hdf5:Group>
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<hdf5:Group Name="g1.2" OBJ-XID="xid_3600" H5Path="/g1/g1.2" Parents="xid_808" H5ParentPaths="/g1" >
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<hdf5:Group Name="g1.2.1" OBJ-XID="xid_4312" H5Path="/g1/g1.2/g1.2.1" Parents="xid_3600" H5ParentPaths="/g1/g1.2" >
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<hdf5:SoftLink LinkName="slink" OBJ-XID="xid_18446744073709551614" H5SourcePath="/g1/g1.2/g1.2.1/slink" TargetPath="somevalue" Parents="xid_4312" H5ParentPaths="/g1/g1.2/g1.2.1" />
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</hdf5:Group>
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<hdf5:ExternalLink LinkName="extlink" OBJ-XID="xid_18446744073709551613" H5SourcePath="/g1/g1.2/extlink" TargetFilename="somefile" TargetPath="somepath" Parents="xid_3600" H5ParentPaths="/g1/g1.2" />
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</hdf5:Group>
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</hdf5:Group>
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<hdf5:Group Name="g2" OBJ-XID="xid_1848" H5Path="/g2" Parents="xid_96" H5ParentPaths="/" >
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<hdf5:Dataset Name="dset2.1" OBJ-XID="xid_3688" H5Path= "/g2/dset2.1" Parents="xid_1848" H5ParentPaths="/g2">
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<hdf5:StorageLayout>
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<hdf5:ContiguousLayout/>
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</hdf5:StorageLayout>
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<hdf5:FillValueInfo FillTime="FillIfSet" AllocationTime="Late">
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<hdf5:FillValue>
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<hdf5:NoFill/>
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</hdf5:FillValue>
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</hdf5:FillValueInfo>
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<hdf5:Dataspace>
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<hdf5:SimpleDataspace Ndims="1">
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<hdf5:Dimension DimSize="10" MaxDimSize="10"/>
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</hdf5:SimpleDataspace>
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</hdf5:Dataspace>
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<hdf5:DataType>
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<hdf5:AtomicType>
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<hdf5:FloatType ByteOrder="BE" Size="4" SignBitLocation="31" ExponentBits="8" ExponentLocation="23" MantissaBits="23" MantissaLocation="0" />
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</hdf5:AtomicType>
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</hdf5:DataType>
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<hdf5:Data>
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<hdf5:DataFromFile>
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1 1.1 1.2 1.3 1.4 1.5 1.6 1.7 1.8 1.9
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</hdf5:DataFromFile>
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</hdf5:Data>
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</hdf5:Dataset>
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<hdf5:Dataset Name="dset2.2" OBJ-XID="xid_8696" H5Path= "/g2/dset2.2" Parents="xid_1848" H5ParentPaths="/g2">
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<hdf5:StorageLayout>
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<hdf5:ContiguousLayout/>
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</hdf5:StorageLayout>
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<hdf5:FillValueInfo FillTime="FillIfSet" AllocationTime="Late">
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<hdf5:FillValue>
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<hdf5:NoFill/>
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</hdf5:FillValue>
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</hdf5:FillValueInfo>
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<hdf5:Dataspace>
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<hdf5:SimpleDataspace Ndims="2">
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<hdf5:Dimension DimSize="3" MaxDimSize="3"/>
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<hdf5:Dimension DimSize="5" MaxDimSize="5"/>
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</hdf5:SimpleDataspace>
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</hdf5:Dataspace>
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<hdf5:DataType>
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<hdf5:AtomicType>
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<hdf5:FloatType ByteOrder="BE" Size="4" SignBitLocation="31" ExponentBits="8" ExponentLocation="23" MantissaBits="23" MantissaLocation="0" />
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</hdf5:AtomicType>
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</hdf5:DataType>
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<hdf5:Data>
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<hdf5:DataFromFile>
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0 0.1 0.2 0.3 0.4
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0 0.2 0.4 0.6 0.8
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0 0.3 0.6 0.9 1.2
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</hdf5:DataFromFile>
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</hdf5:Data>
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</hdf5:Dataset>
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<hdf5:UserDefined LinkName="udlink" OBJ-XID="xid_18446744073709551612" H5SourcePath="/g2/udlink" LinkClass="187" Parents="xid_1848" H5ParentPaths="/g2" />
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</hdf5:Group>
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</hdf5:RootGroup>
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</hdf5:HDF5-File>
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