mirror of
https://github.com/HDFGroup/hdf5.git
synced 2024-11-27 02:10:55 +08:00
333a79c1b2
* OESS-98 convert plugin option to FetchContent, add tests * Fixes for pkcfg files because of plugin option * OESS-98 fix tools test for plugins * Keep doxygen comments under 100 chars long - format hint * Whitespace * HDFFV-11144 - Reclassify CMake messages * HDFFV-11099/11100 added help text * Reworked switch statement to compare string instead * Fix typo * Update CDash mode * Correct name of threadsafe * Correct option name * Undo accidental commit * Note LLVM 10 to 11 format default changes * Update format plugin * Undo clang-format version 11 changes * One more correction * Update supported platforms * Revert whitespace changes * Correct whitespace * Changes from PR#3 * HDFFV-11213 added option to control gcc10 warnings diagnostics * HDFFV-11212 Use the new references correctly in JNI utility and tests * format source * Fix typo * Add new test file * HDFFV-11212 - update test and remove unused arg * Minor non-space formatting changes * Use H5I_INVALID_ID instead of "-1" * source formatting * add missing testfile, update jni function * Undo commit of debug code * remove mislocated file * Fix h5repack test for handling of fapls and id close * Update h5diff test files usage text * HDFFV-11212 add new ref tests for JNI export dataset * src format update * Remove blank line typo * src format typo * long double requires %Lg * Another long double foramt specifer S.B. %Lg * issue with t128bit test * Windows issue with h5dump and type. * Fix review issues * refactor function nesting and fix error checks * format fixes * Remove untested functions and javadoc quiet comments * Restore TRY block. * Change string append errors to memory exception * revert to H5_JNI_FATAL_ERROR - support functions need work * Add assertion error for h5util functions * remove duplicate function * format fix * Revert HD function error handling * Update copyright comments * GH #386 java folder copyright corrections * Whitespace * GH #359 implement and fix tools 1.6 API usage * remove excessive comments * Flip inits to correct ifdef section * rework ifdef to be simpler * format issue * Reformat ifdef inits * remove static attribute * format compliance * Update names * Revert because logic relies on float not being int * Changes noticed from creating merge of #412 * Double underscore change * Correct compiler version variable used * Remove header guard underscores * Whitespace cleanup * Split format source and commit changes on repo push * remove pre-split setting * Change windows TS to use older VS. * correct window os name * HDFFV-11212 JNI export util and Javadoc * Suggested review changes * Another change found * Committing clang-format changes * HDFFV-11113 long double in tools * HDFFV-11113 add note * Disable long double tests for now * HDFFV-11228 remove arbitrary CMake warning groups. * Make each flag a string * Some Javadoc warning fixes * Updated javadoc fixes * # WARNING: head commit changed in the meantime HDFFV-11229 Fix long double usage in tools and java Changed h5dump and h5ls to just print 128-bit for long double type. Added test and file for dataset and attributes with all three float types. * Committing clang-format changes * HDFFV-11229 Add release note * HDFFV-11229 windows testfile needed * fix typo * Remove non supported message text * HDFFV-11229 - change ldouble test to check both native and general * HDFFV-11229 add second file compare * HDFFV-11229 fix reference file * HDFFV-11229 autotools check two refs * HDFFV-11229 revert back to removal of NATIVE_LDOUBLE in tools output * Committing clang-format changes * Update release note * Update attribute type of ref file * Change source of ninja for macs * try port instead of brew * Recommended is to use brew. * Undo non long double changes * remove unneeded file * Fix perl and doxygen CMake code * Add "option" command for clang options * Rework CMake add_custom to use the BYPRODUCTS argument * Add stamp files to BYPRODUCTS * Only one copy of file exists * Fix custom cmmand depends targets * Fix fortran custom command DEPENDS * Add LD_LIBRARY_PATH to tests * Add custom target for DEPENDS * Add h5detect conditionaly to generated target DEPENDS * Correct DEPENDS targets * Parallel builds need the mpi compiler for pkgconfig scripts. * install only if MPI build * Fortran target depends * Remove incorrect source attribute * doxygen adjustments * doxygen build updates * Correct version * Correct function version - function has been merged to 1.12 * Correct version string for map functions * Cleanup warnings for tools debug builds Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
1546 lines
58 KiB
C
1546 lines
58 KiB
C
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
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* Copyright by The HDF Group. *
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* Copyright by the Board of Trustees of the University of Illinois. *
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* All rights reserved. *
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* *
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* This file is part of HDF5. The full HDF5 copyright notice, including *
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* terms governing use, modification, and redistribution, is contained in *
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* the COPYING file, which can be found at the root of the source code *
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* distribution tree, or in https://www.hdfgroup.org/licenses. *
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* If you do not have access to either file, you may request a copy from *
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* help@hdfgroup.org. *
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* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
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/*
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* Purpose: These are string functions for us to use and abuse.
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*/
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#include "H5private.h"
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#include "h5tools.h" /* for h5tool_format_t structure */
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#include "h5tools_ref.h"
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#include "h5tools_str.h" /* function prototypes */
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/* Copied from hl/src/H5LDprivate.h */
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/* Info about the list of comma-separated compound fields */
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typedef struct H5LD_memb_t {
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size_t tot_offset;
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size_t last_tsize;
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hid_t last_tid;
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char **names;
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} H5LD_memb_t;
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/*
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* If REPEAT_VERBOSE is defined then character strings will be printed so
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* that repeated character sequences like "AAAAAAAAAA" are displayed as
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*
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* 'A' repeats 9 times
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*
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* Otherwise the format is more Perl-like
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*
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* 'A'*10
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*
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*/
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#define REPEAT_VERBOSE
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/* Variable length string datatype */
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#define STR_INIT_LEN 4096 /*initial length */
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static char * h5tools_escape(char *s, size_t size);
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static hbool_t h5tools_str_is_zero(const void *_mem, size_t size);
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static void h5tools_print_char(h5tools_str_t *str, const h5tool_format_t *info, char ch);
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void h5tools_str_indent(h5tools_str_t *str, const h5tool_format_t *info, h5tools_context_t *ctx);
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/*-------------------------------------------------------------------------
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* Function: h5tools_str_close
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*
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* Purpose: Closes a string by releasing it's memory and setting the size
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* information to zero.
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*
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* Return: void
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*
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* Programmer: Robb Matzke
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* Monday, April 26, 1999
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*-------------------------------------------------------------------------
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*/
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void
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h5tools_str_close(h5tools_str_t *str)
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{
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if (str && str->nalloc) {
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HDfree(str->s);
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HDmemset(str, 0, sizeof(h5tools_str_t));
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}
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}
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/*-------------------------------------------------------------------------
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* Function: h5tools_str_len
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*
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* Purpose: Returns the length of the string, not counting the null
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* terminator.
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*
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* Return: Success: Length of string
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*
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* Failure: 0
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*
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* Programmer: Robb Matzke
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* Monday, April 26, 1999
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*-------------------------------------------------------------------------
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*/
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H5_ATTR_PURE size_t
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h5tools_str_len(h5tools_str_t *str)
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{
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return str->len;
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}
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/*-------------------------------------------------------------------------
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* Function: h5tools_str_append
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*
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* Purpose: Formats variable arguments according to printf() format
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* string and appends the result to variable length string STR.
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*
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* Return: Success: Pointer to buffer containing result.
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*
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* Failure: NULL
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*
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* Programmer: Robb Matzke
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* Monday, April 26, 1999
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*-------------------------------------------------------------------------
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*/
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char *
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h5tools_str_append(h5tools_str_t *str /*in,out*/, const char *fmt, ...)
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{
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va_list ap;
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/* Make sure we have some memory into which to print */
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if (!str->s || str->nalloc <= 0)
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h5tools_str_reset(str);
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if (HDstrlen(fmt) == 0)
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/* nothing to print */
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return str->s;
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/* Format the arguments and append to the value already in `str' */
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while (1) {
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/* How many bytes available for new value, counting the new NUL */
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int nchars = -1;
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size_t avail = str->nalloc - str->len;
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HDva_start(ap, fmt);
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nchars = HDvsnprintf(str->s + str->len, avail, fmt, ap);
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HDva_end(ap);
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/* Note: HDvsnprintf() behaves differently on Windows as Unix, when
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* buffer is smaller than source string. On Unix, this function
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* returns length of the source string and copy string upto the
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* buffer size with NULL at the end of the buffer. However on
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* Windows with the same condition, this function returns -1 and
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* doesn't add NULL at the end of the buffer.
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* Because of this different return results, the strlen of the new string
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* is used to handle when HDvsnprintf() returns -1 on Windows due
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* to lack of buffer size, so try one more time after realloc more
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* buffer size before return NULL.
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*/
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if (nchars < 0)
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/* failure, such as bad format */
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return NULL;
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if ((size_t)nchars >= avail || (0 == nchars && (HDstrcmp(fmt, "%s") != 0))) {
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/* Truncation return value as documented by C99, or zero return value with either of the
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* following conditions, each of which indicates that the proper C99 return value probably
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* should have been positive when the format string is
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* something other than "%s"
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* Alocate at least twice as much space and try again.
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*/
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size_t newsize = MAX(str->len + (size_t)nchars + 1, 2 * str->nalloc);
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HDassert(newsize > str->nalloc); /*overflow*/
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str->s = (char *)HDrealloc(str->s, newsize);
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HDassert(str->s);
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str->nalloc = newsize;
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}
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else {
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/* Success */
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str->len += (size_t)nchars;
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break;
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}
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}
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return str->s;
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}
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/*-------------------------------------------------------------------------
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* Function: h5tools_str_reset
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*
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* Purpose: Reset the string to the empty value. If no memory is
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* allocated yet then initialize the h5tools_str_t struct.
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*
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* Return: Success: Ptr to the buffer which contains a null
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* character as the first element.
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*
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* Failure: NULL
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*
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* Programmer: Robb Matzke
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* Monday, April 26, 1999
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*-------------------------------------------------------------------------
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*/
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char *
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h5tools_str_reset(h5tools_str_t *str /*in,out*/)
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{
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if (!str->s || str->nalloc <= 0) {
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str->nalloc = STR_INIT_LEN;
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str->s = (char *)HDmalloc(str->nalloc);
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HDassert(str->s);
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}
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str->s[0] = '\0';
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str->len = 0;
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return str->s;
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}
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/*-------------------------------------------------------------------------
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* Function: h5tools_str_trunc
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*
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* Purpose: Truncate a string to be at most SIZE characters.
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*
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* Return: Success: Pointer to the string
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*
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* Failure: NULL
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*
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* Programmer: Robb Matzke
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* Monday, April 26, 1999
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*-------------------------------------------------------------------------
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*/
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char *
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h5tools_str_trunc(h5tools_str_t *str /*in,out*/, size_t size)
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{
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if (size < str->len) {
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str->len = size;
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str->s[size] = '\0';
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}
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return str->s;
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}
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/*-------------------------------------------------------------------------
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* Function: h5tools_str_fmt
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*
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* Purpose: Reformat a string contents beginning at character START
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* according to printf format FMT. FMT should contain no format
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* specifiers except possibly the `%s' variety. For example, if
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* the input string is `hello' and the format is "<<%s>>" then
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* the output value will be "<<hello>>".
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*
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* Return: Success: A pointer to the resulting string.
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*
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* Failure: NULL
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*
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* Programmer: Robb Matzke
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* Monday, April 26, 1999
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*-------------------------------------------------------------------------
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*/
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char *
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h5tools_str_fmt(h5tools_str_t *str /*in,out*/, size_t start, const char *fmt)
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{
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char _temp[1024], *temp = _temp;
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HDassert(str);
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HDassert(fmt);
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/* If the format string is simply "%s" then don't bother doing anything */
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if (!HDstrcmp(fmt, "%s"))
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return str->s;
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/*
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* Save the input value if there is a `%' anywhere in FMT. Otherwise
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* don't bother because we don't need a temporary copy.
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*/
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if (HDstrchr(fmt, '%')) {
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size_t n = sizeof(_temp);
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if (str->len - start + 1 > n) {
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n = str->len - start + 1;
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temp = (char *)HDmalloc(n);
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HDassert(temp);
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}
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HDstrncpy(temp, str->s + start, n);
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}
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/* Reset the output string and append a formatted version */
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h5tools_str_trunc(str, start);
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h5tools_str_append(str, fmt, temp);
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/* Free the temp buffer if we allocated one */
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if (temp != _temp)
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HDfree(temp);
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return str->s;
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}
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/*-------------------------------------------------------------------------
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* Function: h5tools_str_prefix
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*
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* Purpose: Renders the line prefix value into string STR.
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*
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* Return: Success: Pointer to the prefix.
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* Failure: NULL
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*-------------------------------------------------------------------------
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*/
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char *
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h5tools_str_prefix(h5tools_str_t *str /*in,out*/, const h5tool_format_t *info, hsize_t elmtno,
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h5tools_context_t *ctx)
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{
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size_t i = 0;
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H5TOOLS_START_DEBUG(" ");
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H5TOOLS_DEBUG("elmtno=%ld, ctx->ndims=%d", elmtno, ctx->ndims);
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h5tools_str_reset(str);
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calc_acc_pos(ctx->ndims, elmtno, ctx->acc, ctx->pos);
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if (ctx->ndims > 0) {
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/* Print the index values */
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for (i = 0; i < (size_t)ctx->ndims; i++) {
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if (i)
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h5tools_str_append(str, "%s", OPT(info->idx_sep, ","));
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h5tools_str_append(str, OPT(info->idx_n_fmt, HSIZE_T_FORMAT), (hsize_t)ctx->pos[i]);
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}
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}
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else /* Scalar */
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h5tools_str_append(str, OPT(info->idx_n_fmt, HSIZE_T_FORMAT), (hsize_t)elmtno);
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H5TOOLS_DEBUG("str=%s", str->s);
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H5TOOLS_ENDDEBUG(" ");
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/* Add prefix and suffix to the index */
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return h5tools_str_fmt(str, (size_t)0, OPT(info->idx_fmt, "%s: "));
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}
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/*-------------------------------------------------------------------------
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* Function: h5tools_str_region_prefix
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*
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* Purpose: Renders the line prefix value into string STR. Region reference specific.
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*
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* Return: Success: Pointer to the prefix.
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* Failure: NULL
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*-------------------------------------------------------------------------
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*/
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char *
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h5tools_str_region_prefix(h5tools_str_t *str /*in,out*/, const h5tool_format_t *info, hsize_t elmtno,
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const hsize_t *ptdata, h5tools_context_t *ctx)
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{
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size_t i = 0;
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H5TOOLS_START_DEBUG(" ");
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H5TOOLS_DEBUG("elmtno=%ld, ctx->ndims=%d", elmtno, ctx->ndims);
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h5tools_str_reset(str);
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calc_acc_pos(ctx->ndims, elmtno, ctx->acc, ctx->pos);
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if (ctx->ndims > 0) {
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/* Print the index values */
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for (i = 0; i < (size_t)ctx->ndims; i++) {
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ctx->pos[i] += (unsigned long)ptdata[ctx->sm_pos + i];
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if (i)
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h5tools_str_append(str, "%s", OPT(info->idx_sep, ","));
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h5tools_str_append(str, OPT(info->idx_n_fmt, HSIZE_T_FORMAT), (hsize_t)ctx->pos[i]);
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}
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}
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else /* Scalar */
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h5tools_str_append(str, OPT(info->idx_n_fmt, HSIZE_T_FORMAT), (hsize_t)0);
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H5TOOLS_DEBUG("str=%s", str->s);
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H5TOOLS_ENDDEBUG(" ");
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/* Add prefix and suffix to the index */
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return h5tools_str_fmt(str, (size_t)0, OPT(info->idx_fmt, "%s: "));
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}
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/*-------------------------------------------------------------------------
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* Function: h5tools_str_dump_space_slabs
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*
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* Purpose: Prints information about a dataspace selection by appending
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* the information to the specified string.
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*
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* Return: none
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*
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* In/Out:
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* h5tools_context_t *ctx
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* h5tools_str_t *str
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*-------------------------------------------------------------------------
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*/
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void
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h5tools_str_dump_space_slabs(h5tools_str_t *str, hid_t rspace, const h5tool_format_t *info,
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h5tools_context_t *ctx)
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{
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hsize_t start[H5S_MAX_RANK];
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hsize_t stride[H5S_MAX_RANK];
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hsize_t count[H5S_MAX_RANK];
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hsize_t block[H5S_MAX_RANK];
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int j;
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int ndims = H5Sget_simple_extent_ndims(rspace);
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H5Sget_regular_hyperslab(rspace, start, stride, count, block);
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/* Print hyperslab information */
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/* Start coordinates */
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h5tools_str_append(str, "%s%s ", info->line_indent, START);
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for (j = 0; j < ndims; j++)
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h5tools_str_append(str, "%s" HSIZE_T_FORMAT, j ? "," : "(", start[j]);
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h5tools_str_append(str, ")");
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h5tools_str_append(str, "%s", "\n");
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h5tools_str_indent(str, info, ctx);
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/* Stride coordinates */
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h5tools_str_append(str, "%s ", STRIDE);
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for (j = 0; j < ndims; j++)
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h5tools_str_append(str, "%s" HSIZE_T_FORMAT, j ? "," : "(", stride[j]);
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h5tools_str_append(str, ")");
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h5tools_str_append(str, "%s", "\n");
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h5tools_str_indent(str, info, ctx);
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|
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/* Count coordinates */
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h5tools_str_append(str, "%s ", COUNT);
|
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for (j = 0; j < ndims; j++) {
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if (count[j] == H5S_UNLIMITED)
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h5tools_str_append(str, "%s%s", j ? "," : "(", "H5S_UNLIMITED");
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else
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h5tools_str_append(str, "%s" HSIZE_T_FORMAT, j ? "," : "(", count[j]);
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}
|
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h5tools_str_append(str, ")");
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h5tools_str_append(str, "%s", "\n");
|
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h5tools_str_indent(str, info, ctx);
|
|
|
|
/* Block coordinates */
|
|
h5tools_str_append(str, "%s ", BLOCK);
|
|
for (j = 0; j < ndims; j++) {
|
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if (block[j] == H5S_UNLIMITED)
|
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h5tools_str_append(str, "%s%s", j ? "," : "(", "H5S_UNLIMITED");
|
|
else
|
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h5tools_str_append(str, "%s" HSIZE_T_FORMAT, j ? "," : "(", block[j]);
|
|
}
|
|
h5tools_str_append(str, ")");
|
|
}
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* Function: h5tools_str_dump_space_blocks
|
|
*
|
|
* Purpose: Prints information about a dataspace selection by appending
|
|
* the information to the specified string.
|
|
*
|
|
* Return: none
|
|
*
|
|
* In/Out: h5tools_str_t *str
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
void
|
|
h5tools_str_dump_space_blocks(h5tools_str_t *str, hid_t rspace, const h5tool_format_t *info)
|
|
{
|
|
hssize_t snblocks;
|
|
|
|
/*
|
|
* This function fails if the rspace does not have blocks.
|
|
*/
|
|
H5E_BEGIN_TRY
|
|
{
|
|
snblocks = H5Sget_select_hyper_nblocks(rspace);
|
|
}
|
|
H5E_END_TRY;
|
|
|
|
/* Print block information */
|
|
if (snblocks > 0) {
|
|
hsize_t alloc_size;
|
|
hsize_t nblocks;
|
|
hsize_t *ptdata;
|
|
hsize_t u;
|
|
unsigned ndims = (unsigned)H5Sget_simple_extent_ndims(rspace);
|
|
|
|
nblocks = (hsize_t)snblocks;
|
|
alloc_size = nblocks * ndims * 2 * sizeof(ptdata[0]);
|
|
HDassert(alloc_size == (hsize_t)((size_t)alloc_size)); /*check for overflow*/
|
|
ptdata = (hsize_t *)HDmalloc((size_t)alloc_size);
|
|
H5Sget_select_hyper_blocklist(rspace, (hsize_t)0, nblocks, ptdata);
|
|
|
|
for (u = 0; u < nblocks; u++) {
|
|
unsigned v;
|
|
|
|
h5tools_str_append(str, info->dset_blockformat_pre, u ? "," OPTIONAL_LINE_BREAK " " : "",
|
|
(unsigned long)u);
|
|
|
|
/* Start coordinates and opposite corner */
|
|
for (v = 0; v < ndims; v++)
|
|
h5tools_str_append(str, "%s" HSIZE_T_FORMAT, v ? "," : "(", ptdata[u * 2 * ndims + v]);
|
|
|
|
for (v = 0; v < ndims; v++)
|
|
h5tools_str_append(str, "%s" HSIZE_T_FORMAT, v ? "," : ")-(",
|
|
ptdata[u * 2 * ndims + v + ndims]);
|
|
|
|
h5tools_str_append(str, ")");
|
|
}
|
|
|
|
HDfree(ptdata);
|
|
} /* end if (nblocks > 0) */
|
|
}
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* Function: h5tools_str_dump_space_points
|
|
*
|
|
* Purpose: Prints information about a dataspace selection by appending
|
|
* the information to the specified string.
|
|
*
|
|
* Return: none
|
|
*
|
|
* In/Out: h5tools_str_t *str
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
void
|
|
h5tools_str_dump_space_points(h5tools_str_t *str, hid_t rspace, const h5tool_format_t *info)
|
|
{
|
|
hssize_t snpoints;
|
|
|
|
/*
|
|
* This function fails if the rspace does not have points.
|
|
*/
|
|
H5E_BEGIN_TRY
|
|
{
|
|
snpoints = H5Sget_select_elem_npoints(rspace);
|
|
}
|
|
H5E_END_TRY;
|
|
|
|
/* Print point information */
|
|
if (snpoints > 0) {
|
|
hsize_t alloc_size;
|
|
hsize_t npoints;
|
|
hsize_t *ptdata;
|
|
hsize_t u;
|
|
unsigned ndims = (unsigned)H5Sget_simple_extent_ndims(rspace);
|
|
|
|
npoints = (hsize_t)snpoints;
|
|
alloc_size = npoints * ndims * sizeof(ptdata[0]);
|
|
HDassert(alloc_size == (hsize_t)((size_t)alloc_size)); /*check for overflow*/
|
|
ptdata = (hsize_t *)HDmalloc((size_t)alloc_size);
|
|
H5Sget_select_elem_pointlist(rspace, (hsize_t)0, npoints, ptdata);
|
|
|
|
for (u = 0; u < npoints; u++) {
|
|
unsigned v;
|
|
|
|
h5tools_str_append(str, info->dset_ptformat_pre, u ? "," OPTIONAL_LINE_BREAK " " : "",
|
|
(unsigned long)u);
|
|
|
|
for (v = 0; v < ndims; v++)
|
|
h5tools_str_append(str, "%s" HSIZE_T_FORMAT, v ? "," : "(", (ptdata[u * ndims + v]));
|
|
|
|
h5tools_str_append(str, ")");
|
|
}
|
|
|
|
HDfree(ptdata);
|
|
} /* end if (npoints > 0) */
|
|
}
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* Function: h5tools_print_char
|
|
*
|
|
* Purpose: Shove a character into the STR.
|
|
*
|
|
* Return: Nothing
|
|
*
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
static void
|
|
h5tools_print_char(h5tools_str_t *str, const h5tool_format_t *info, char ch)
|
|
{
|
|
if (info->str_locale == ESCAPE_HTML) {
|
|
if (ch <= ' ' || ch > '~')
|
|
h5tools_str_append(str, "%%%02x", ch);
|
|
else
|
|
h5tools_str_append(str, "%c", ch);
|
|
}
|
|
else {
|
|
switch (ch) {
|
|
case '"':
|
|
if (!info->do_escape)
|
|
h5tools_str_append(str, "\"");
|
|
else
|
|
h5tools_str_append(str, "\\\"");
|
|
break;
|
|
case '\\':
|
|
if (!info->do_escape)
|
|
h5tools_str_append(str, "\\");
|
|
else
|
|
h5tools_str_append(str, "\\\\");
|
|
break;
|
|
case '\b':
|
|
if (!info->do_escape)
|
|
h5tools_str_append(str, "\b");
|
|
else
|
|
h5tools_str_append(str, "\\b");
|
|
break;
|
|
case '\f':
|
|
if (!info->do_escape)
|
|
h5tools_str_append(str, "\f");
|
|
else
|
|
h5tools_str_append(str, "\\f");
|
|
break;
|
|
case '\n':
|
|
if (!info->do_escape) {
|
|
h5tools_str_append(str, "\n");
|
|
h5tools_str_append(str, " ");
|
|
}
|
|
else
|
|
h5tools_str_append(str, "\\n");
|
|
break;
|
|
case '\r':
|
|
if (!info->do_escape) {
|
|
h5tools_str_append(str, "\r");
|
|
h5tools_str_append(str, " ");
|
|
}
|
|
else
|
|
h5tools_str_append(str, "\\r");
|
|
break;
|
|
case '\t':
|
|
if (!info->do_escape)
|
|
h5tools_str_append(str, "\t");
|
|
else
|
|
h5tools_str_append(str, "\\t");
|
|
break;
|
|
default:
|
|
if (isprint(ch))
|
|
h5tools_str_append(str, "%c", ch);
|
|
else
|
|
h5tools_str_append(str, "\\%03o", ch);
|
|
|
|
break;
|
|
}
|
|
}
|
|
}
|
|
void
|
|
h5tools_str_indent(h5tools_str_t *str, const h5tool_format_t *info, h5tools_context_t *ctx)
|
|
{
|
|
unsigned u, indentlevel = 0;
|
|
|
|
/* Write new prefix */
|
|
if (ctx->indent_level > 0)
|
|
indentlevel = ctx->indent_level;
|
|
else
|
|
/*
|
|
* This is because sometimes we don't print out all the header
|
|
* info for the data (like the tattr-2.ddl example). If that happens
|
|
* the ctx->indent_level is negative so we need to skip the above and
|
|
* just print out the default indent levels.
|
|
*/
|
|
indentlevel = ctx->default_indent_level;
|
|
|
|
for (u = 0; u < indentlevel; u++)
|
|
h5tools_str_append(str, "%s", OPT(info->line_indent, ""));
|
|
}
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* Function: h5tools_str_sprint
|
|
*
|
|
* Purpose: Renders the value pointed to by VP of type TYPE into variable
|
|
* length string STR.
|
|
*
|
|
* Return: A pointer to memory containing the result or NULL on error.
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
char *
|
|
h5tools_str_sprint(h5tools_str_t *str, const h5tool_format_t *info, hid_t container, hid_t type, void *vp,
|
|
h5tools_context_t *ctx)
|
|
{
|
|
size_t nsize, offset, size = 0, nelmts, start;
|
|
H5T_sign_t nsign;
|
|
char * name = NULL;
|
|
unsigned char *ucp_vp = (unsigned char *)vp;
|
|
char * cp_vp = (char *)vp;
|
|
hid_t memb = H5I_INVALID_HID;
|
|
hid_t obj = H5I_INVALID_HID;
|
|
static char fmt_llong[8], fmt_ullong[8];
|
|
H5T_str_t pad;
|
|
H5T_class_t type_class;
|
|
char * ret_value = NULL;
|
|
|
|
H5TOOLS_START_DEBUG(" ");
|
|
/* Build default formats for long long types */
|
|
if (!fmt_llong[0]) {
|
|
HDsnprintf(fmt_llong, sizeof(fmt_llong), "%%%sd", H5_PRINTF_LL_WIDTH);
|
|
HDsnprintf(fmt_ullong, sizeof(fmt_ullong), "%%%su", H5_PRINTF_LL_WIDTH);
|
|
}
|
|
|
|
/* Append value depending on data type */
|
|
start = h5tools_str_len(str);
|
|
|
|
nsize = H5Tget_size(type);
|
|
nsign = H5Tget_sign(type);
|
|
if (info->raw) {
|
|
size_t i;
|
|
|
|
H5TOOLS_DEBUG("info->raw");
|
|
if (1 == nsize)
|
|
h5tools_str_append(str, OPT(info->fmt_raw, "0x%02x"), ucp_vp[0]);
|
|
else
|
|
for (i = 0; i < nsize; i++) {
|
|
if (i)
|
|
h5tools_str_append(str, ":");
|
|
h5tools_str_append(str, OPT(info->fmt_raw, "%02x"), ucp_vp[i]);
|
|
}
|
|
}
|
|
else {
|
|
H5TOOLS_DEBUG("H5Tget_class(type)");
|
|
if ((type_class = H5Tget_class(type)) < 0) {
|
|
H5TOOLS_ENDDEBUG(" with %s", "NULL");
|
|
return NULL;
|
|
}
|
|
switch (type_class) {
|
|
case H5T_FLOAT:
|
|
H5TOOLS_DEBUG("H5T_FLOAT");
|
|
if (sizeof(float) == nsize) {
|
|
/* if (H5Tequal(type, H5T_NATIVE_FLOAT)) */
|
|
float tempfloat;
|
|
|
|
HDmemcpy(&tempfloat, vp, sizeof(float));
|
|
h5tools_str_append(str, OPT(info->fmt_float, "%g"), (double)tempfloat);
|
|
}
|
|
else if (sizeof(double) == nsize) {
|
|
/* if (H5Tequal(type, H5T_NATIVE_DOUBLE)) */
|
|
double tempdouble;
|
|
|
|
HDmemcpy(&tempdouble, vp, sizeof(double));
|
|
h5tools_str_append(str, OPT(info->fmt_double, "%g"), tempdouble);
|
|
#if H5_SIZEOF_LONG_DOUBLE != 0
|
|
}
|
|
else if (sizeof(long double) == nsize) {
|
|
/* if (H5Tequal(type, H5T_NATIVE_LDOUBLE)) */
|
|
long double templdouble;
|
|
|
|
HDmemcpy(&templdouble, vp, sizeof(long double));
|
|
h5tools_str_append(str, "%Lg", templdouble);
|
|
#endif
|
|
}
|
|
else {
|
|
size_t i;
|
|
|
|
for (i = 0; i < nsize; i++) {
|
|
if (i)
|
|
h5tools_str_append(str, ":");
|
|
h5tools_str_append(str, OPT(info->fmt_raw, "%02x"), ucp_vp[i]);
|
|
}
|
|
}
|
|
break;
|
|
|
|
case H5T_STRING: {
|
|
unsigned int i;
|
|
char quote = '\0';
|
|
char * s;
|
|
|
|
H5TOOLS_DEBUG("H5T_STRING");
|
|
quote = '\0';
|
|
if (H5Tis_variable_str(type)) {
|
|
/* cp_vp is the pointer into the struct where a `char*' is stored. So we have
|
|
* to dereference the pointer to get the `char*' to pass to HDstrlen(). */
|
|
s = *(char **)((void *)cp_vp);
|
|
if (s != NULL)
|
|
size = HDstrlen(s);
|
|
}
|
|
else {
|
|
s = cp_vp;
|
|
size = H5Tget_size(type);
|
|
}
|
|
pad = H5Tget_strpad(type);
|
|
|
|
/* Check for NULL pointer for string */
|
|
if (s == NULL)
|
|
h5tools_str_append(str, "NULL");
|
|
else {
|
|
for (i = 0; i < size && (s[i] || pad != H5T_STR_NULLTERM); i++) {
|
|
unsigned j = 1;
|
|
|
|
/*
|
|
* Count how many times the next character repeats. If the
|
|
* threshold is zero then that means it can repeat any number
|
|
* of times.
|
|
*/
|
|
if (info->str_repeat > 0)
|
|
while (i + j < size && s[i] == s[i + j])
|
|
j++;
|
|
|
|
/*
|
|
* Print the opening quote. If the repeat count is high enough to
|
|
* warrant printing the number of repeats instead of enumerating
|
|
* the characters, then make sure the character to be repeated is
|
|
* in it's own quote.
|
|
*/
|
|
if (info->str_repeat > 0 && j > info->str_repeat) {
|
|
if (quote)
|
|
h5tools_str_append(str, "%c", quote);
|
|
|
|
quote = '\'';
|
|
h5tools_str_append(str, "%s%c", i ? " " : "", quote);
|
|
}
|
|
else if (!quote) {
|
|
quote = '"';
|
|
h5tools_str_append(str, "%s%c", i ? " " : "", quote);
|
|
}
|
|
|
|
/* Print the character */
|
|
h5tools_print_char(str, info, s[i]);
|
|
|
|
/* Print the repeat count */
|
|
if (info->str_repeat && j > info->str_repeat) {
|
|
#ifdef REPEAT_VERBOSE
|
|
h5tools_str_append(str, "%c repeats %d times", quote, j - 1);
|
|
#else
|
|
h5tools_str_append(str, "%c*%d", quote, j - 1);
|
|
#endif /* REPEAT_VERBOSE */
|
|
quote = '\0';
|
|
i += j - 1;
|
|
}
|
|
}
|
|
|
|
if (quote)
|
|
h5tools_str_append(str, "%c", quote);
|
|
|
|
if (i == 0)
|
|
/*empty string*/
|
|
h5tools_str_append(str, "\"\"");
|
|
} /* end else */
|
|
} break;
|
|
|
|
case H5T_INTEGER:
|
|
H5TOOLS_DEBUG("H5T_INTEGER");
|
|
if (sizeof(char) == nsize) {
|
|
if (info->ascii)
|
|
h5tools_print_char(str, info, (char)(*ucp_vp));
|
|
else if (H5T_SGN_NONE == nsign) {
|
|
unsigned char tempuchar;
|
|
|
|
HDmemcpy(&tempuchar, ucp_vp, sizeof(unsigned char));
|
|
if (packed_bits_num) {
|
|
if (packed_data_offset >= 8 * sizeof(unsigned char))
|
|
tempuchar = 0;
|
|
else
|
|
tempuchar =
|
|
(unsigned char)((unsigned long long)(tempuchar >> packed_data_offset) &
|
|
packed_data_mask);
|
|
}
|
|
h5tools_str_append(str, OPT(info->fmt_uchar, "%hhu"), tempuchar);
|
|
}
|
|
else {
|
|
signed char tempchar;
|
|
|
|
HDmemcpy(&tempchar, cp_vp, sizeof(char));
|
|
if (packed_bits_num) {
|
|
if (packed_data_offset >= 8 * sizeof(char))
|
|
tempchar = 0;
|
|
else
|
|
tempchar =
|
|
(signed char)((unsigned long long)(tempchar >> packed_data_offset) &
|
|
packed_data_mask);
|
|
}
|
|
h5tools_str_append(str, OPT(info->fmt_schar, "%hhd"), tempchar);
|
|
}
|
|
} /* end if (sizeof(char) == nsize) */
|
|
else if (sizeof(int) == nsize) {
|
|
if (H5T_SGN_NONE == nsign) {
|
|
unsigned int tempuint;
|
|
|
|
HDmemcpy(&tempuint, vp, sizeof(unsigned int));
|
|
if (packed_bits_num) {
|
|
if (packed_data_offset >= 8 * sizeof(unsigned int))
|
|
tempuint = 0;
|
|
else
|
|
tempuint = (unsigned)((tempuint >> packed_data_offset) & packed_data_mask);
|
|
}
|
|
h5tools_str_append(str, OPT(info->fmt_uint, "%u"), tempuint);
|
|
}
|
|
else {
|
|
int tempint;
|
|
|
|
HDmemcpy(&tempint, vp, sizeof(int));
|
|
if (packed_bits_num) {
|
|
if (packed_data_offset >= 8 * sizeof(int))
|
|
tempint = 0;
|
|
else
|
|
tempint = (int)((unsigned long long)(tempint >> packed_data_offset) &
|
|
packed_data_mask);
|
|
}
|
|
h5tools_str_append(str, OPT(info->fmt_int, "%d"), tempint);
|
|
}
|
|
} /* end if (sizeof(int) == nsize) */
|
|
else if (sizeof(short) == nsize) {
|
|
if (H5T_SGN_NONE == nsign) {
|
|
unsigned short tempushort;
|
|
|
|
HDmemcpy(&tempushort, vp, sizeof(unsigned short));
|
|
if (packed_bits_num) {
|
|
if (packed_data_offset >= 8 * sizeof(unsigned short))
|
|
tempushort = 0;
|
|
else
|
|
tempushort =
|
|
(unsigned short)((unsigned long long)(tempushort >> packed_data_offset) &
|
|
packed_data_mask);
|
|
}
|
|
h5tools_str_append(str, OPT(info->fmt_ushort, "%hu"), tempushort);
|
|
}
|
|
else {
|
|
short tempshort;
|
|
|
|
HDmemcpy(&tempshort, vp, sizeof(short));
|
|
if (packed_bits_num) {
|
|
if (packed_data_offset >= 8 * sizeof(short))
|
|
tempshort = 0;
|
|
else
|
|
tempshort = (short)((unsigned long long)(tempshort >> packed_data_offset) &
|
|
packed_data_mask);
|
|
}
|
|
h5tools_str_append(str, OPT(info->fmt_short, "%hd"), tempshort);
|
|
}
|
|
} /* end if (sizeof(short) == nsize) */
|
|
else if (sizeof(long) == nsize) {
|
|
if (H5T_SGN_NONE == nsign) {
|
|
unsigned long tempulong;
|
|
|
|
HDmemcpy(&tempulong, vp, sizeof(unsigned long));
|
|
if (packed_bits_num) {
|
|
if (packed_data_offset >= 8 * sizeof(unsigned long))
|
|
tempulong = 0;
|
|
else
|
|
tempulong = (tempulong >> packed_data_offset) & packed_data_mask;
|
|
}
|
|
h5tools_str_append(str, OPT(info->fmt_ulong, "%lu"), tempulong);
|
|
}
|
|
else {
|
|
long templong;
|
|
|
|
HDmemcpy(&templong, vp, sizeof(long));
|
|
if (packed_bits_num) {
|
|
if (packed_data_offset >= 8 * sizeof(long))
|
|
templong = 0;
|
|
else
|
|
templong = (long)((unsigned long long)(templong >> packed_data_offset) &
|
|
packed_data_mask);
|
|
}
|
|
h5tools_str_append(str, OPT(info->fmt_long, "%ld"), templong);
|
|
}
|
|
} /* end if (sizeof(long) == nsize) */
|
|
#if H5_SIZEOF_LONG != H5_SIZEOF_LONG_LONG
|
|
else if (sizeof(long long) == nsize) {
|
|
if (H5T_SGN_NONE == nsign) {
|
|
unsigned long long tempullong;
|
|
|
|
HDmemcpy(&tempullong, vp, sizeof(unsigned long long));
|
|
if (packed_bits_num) {
|
|
if (packed_data_offset >= 8 * sizeof(unsigned long long))
|
|
tempullong = 0;
|
|
else
|
|
tempullong = (tempullong >> packed_data_offset) & packed_data_mask;
|
|
}
|
|
h5tools_str_append(str, OPT(info->fmt_ullong, fmt_ullong), tempullong);
|
|
}
|
|
else {
|
|
long long templlong;
|
|
|
|
HDmemcpy(&templlong, vp, sizeof(long long));
|
|
if (packed_bits_num) {
|
|
if (packed_data_offset >= 8 * sizeof(long long))
|
|
templlong = 0;
|
|
else
|
|
templlong = (templlong >> packed_data_offset) & packed_data_mask;
|
|
}
|
|
h5tools_str_append(str, OPT(info->fmt_llong, fmt_llong), templlong);
|
|
}
|
|
} /* end if (sizeof(long long) == nsize) */
|
|
#endif /* H5_SIZEOF_LONG != H5_SIZEOF_LONG_LONG */
|
|
break;
|
|
|
|
case H5T_COMPOUND:
|
|
H5TOOLS_DEBUG("H5T_COMPOUND");
|
|
if (ctx->cmpd_listv) { /* there is <list_of_fields> */
|
|
unsigned save_indent_level; /* The indentation level */
|
|
size_t curr_field; /* Current field to display */
|
|
int i = 0; /* Local index variable */
|
|
unsigned x = 0; /* Local index variable */
|
|
const H5LD_memb_t *const *listv; /* Vector of information for <list_of_fields> */
|
|
|
|
listv = ctx->cmpd_listv;
|
|
ctx->cmpd_listv = NULL;
|
|
|
|
h5tools_str_append(str, "%s", OPT(info->cmpd_pre, "{"));
|
|
|
|
/*
|
|
* Go through the vector containing info about the comma-separated list of
|
|
* compound fields and then members in each field:
|
|
* put in "{", "}", ",", member name and value accordingly.
|
|
*/
|
|
save_indent_level = ctx->indent_level;
|
|
for (curr_field = 0; listv[curr_field] != NULL; curr_field++) {
|
|
if (curr_field)
|
|
h5tools_str_append(str, "%s", OPT(info->cmpd_sep, ", " OPTIONAL_LINE_BREAK));
|
|
else
|
|
h5tools_str_append(str, "%s", OPT(info->cmpd_end, ""));
|
|
|
|
if (info->arr_linebreak)
|
|
h5tools_str_indent(str, info, ctx);
|
|
|
|
/* Process members of each field */
|
|
for (i = 0; listv[curr_field]->names[i] != NULL; i++) {
|
|
h5tools_str_append(str, OPT(info->cmpd_name, ""), listv[curr_field]->names[i]);
|
|
if (i) {
|
|
ctx->indent_level++;
|
|
h5tools_str_append(str, "%s", OPT(info->cmpd_pre, "{"));
|
|
}
|
|
}
|
|
h5tools_str_sprint(str, info, container, listv[curr_field]->last_tid,
|
|
cp_vp + listv[curr_field]->tot_offset, ctx);
|
|
if (ctx->indent_level > 0)
|
|
for (x = ctx->indent_level; x > 0; x--)
|
|
h5tools_str_append(str, "%s", OPT(info->cmpd_suf, "}"));
|
|
ctx->indent_level = save_indent_level;
|
|
}
|
|
|
|
if (info->arr_linebreak) {
|
|
h5tools_str_append(str, "%s", OPT(info->cmpd_end, ""));
|
|
h5tools_str_indent(str, info, ctx);
|
|
}
|
|
h5tools_str_append(str, "%s", OPT(info->cmpd_suf, "}"));
|
|
|
|
ctx->cmpd_listv = info->cmpd_listv;
|
|
}
|
|
else {
|
|
int retvalue;
|
|
|
|
retvalue = H5Tget_nmembers(type);
|
|
if (retvalue >= 0) {
|
|
unsigned j;
|
|
unsigned nmembs = (unsigned)retvalue;
|
|
|
|
h5tools_str_append(str, "%s", OPT(info->cmpd_pre, "{"));
|
|
|
|
ctx->indent_level++;
|
|
|
|
for (j = 0; j < nmembs; j++) {
|
|
if (j)
|
|
h5tools_str_append(str, "%s", OPT(info->cmpd_sep, ", " OPTIONAL_LINE_BREAK));
|
|
else
|
|
h5tools_str_append(str, "%s", OPT(info->cmpd_end, ""));
|
|
|
|
if (info->arr_linebreak)
|
|
h5tools_str_indent(str, info, ctx);
|
|
|
|
/* The name */
|
|
name = H5Tget_member_name(type, j);
|
|
h5tools_str_append(str, OPT(info->cmpd_name, ""), name);
|
|
H5free_memory(name);
|
|
|
|
/* The value */
|
|
offset = H5Tget_member_offset(type, j);
|
|
memb = H5Tget_member_type(type, j);
|
|
|
|
h5tools_str_sprint(str, info, container, memb, cp_vp + offset, ctx);
|
|
|
|
H5Tclose(memb);
|
|
}
|
|
ctx->indent_level--;
|
|
|
|
if (info->arr_linebreak) {
|
|
h5tools_str_append(str, "%s", OPT(info->cmpd_end, ""));
|
|
h5tools_str_indent(str, info, ctx);
|
|
}
|
|
h5tools_str_append(str, "%s", OPT(info->cmpd_suf, "}"));
|
|
}
|
|
}
|
|
break;
|
|
|
|
case H5T_ENUM: {
|
|
char enum_name[1024];
|
|
|
|
H5TOOLS_DEBUG("H5T_ENUM");
|
|
if (H5Tenum_nameof(type, vp, enum_name, sizeof enum_name) >= 0)
|
|
h5tools_str_append(str, h5tools_escape(enum_name, sizeof(enum_name)));
|
|
else {
|
|
size_t i;
|
|
if (1 == nsize)
|
|
h5tools_str_append(str, "0x%02x", ucp_vp[0]);
|
|
else
|
|
for (i = 0; i < nsize; i++)
|
|
h5tools_str_append(str, "%s%02x", i ? ":" : "", ucp_vp[i]);
|
|
}
|
|
} break;
|
|
|
|
case H5T_REFERENCE:
|
|
H5TOOLS_DEBUG("H5T_REFERENCE");
|
|
if (h5tools_str_is_zero(vp, nsize))
|
|
h5tools_str_append(str, "NULL");
|
|
else {
|
|
if (H5Tequal(type, H5T_STD_REF)) {
|
|
H5O_type_t obj_type = -1; /* Object type */
|
|
H5R_type_t ref_type; /* Reference type */
|
|
H5R_ref_t *ref_vp = (H5R_ref_t *)vp;
|
|
|
|
H5TOOLS_DEBUG("H5T_REFERENCE:H5T_STD_REF");
|
|
ref_type = H5Rget_type(ref_vp);
|
|
H5Rget_obj_type3(ref_vp, H5P_DEFAULT, &obj_type);
|
|
switch (ref_type) {
|
|
case H5R_OBJECT1: {
|
|
/* Object references -- show the type and OID of the referenced object. */
|
|
H5O_info2_t oi;
|
|
char * obj_tok_str = NULL;
|
|
|
|
H5TOOLS_DEBUG("ref_type is H5R_OBJECT1");
|
|
if ((obj = H5Ropen_object(ref_vp, H5P_DEFAULT, H5P_DEFAULT)) >= 0) {
|
|
H5Oget_info3(obj, &oi, H5O_INFO_BASIC);
|
|
H5Otoken_to_str(obj, &oi.token, &obj_tok_str);
|
|
}
|
|
else
|
|
H5TOOLS_ERROR(NULL, "H5Ropen_object H5R_OBJECT1 failed");
|
|
|
|
/* Print object type and close object */
|
|
switch (obj_type) {
|
|
case H5O_TYPE_GROUP:
|
|
h5tools_str_append(str, "%u-%s", (unsigned)oi.type, H5_TOOLS_GROUP);
|
|
break;
|
|
|
|
case H5O_TYPE_DATASET:
|
|
h5tools_str_append(str, "%u-%s", (unsigned)oi.type, H5_TOOLS_DATASET);
|
|
break;
|
|
|
|
case H5O_TYPE_NAMED_DATATYPE:
|
|
h5tools_str_append(str, "%u-%s", (unsigned)oi.type,
|
|
H5_TOOLS_DATATYPE);
|
|
break;
|
|
|
|
case H5O_TYPE_MAP:
|
|
case H5O_TYPE_UNKNOWN:
|
|
case H5O_TYPE_NTYPES:
|
|
default:
|
|
h5tools_str_append(str, "%u-%s", (unsigned)oi.type, H5_TOOLS_UNKNOWN);
|
|
break;
|
|
} /* end switch */
|
|
|
|
h5tools_str_sprint_reference(str, ref_vp);
|
|
|
|
/* Print OID */
|
|
if (info->obj_hidefileno)
|
|
h5tools_str_append(str, info->obj_format, obj_tok_str);
|
|
else
|
|
h5tools_str_append(str, info->obj_format, oi.fileno, obj_tok_str);
|
|
|
|
if (obj_tok_str) {
|
|
H5free_memory(obj_tok_str);
|
|
obj_tok_str = NULL;
|
|
}
|
|
|
|
if (obj >= 0)
|
|
if (H5Oclose(obj) < 0)
|
|
H5TOOLS_ERROR(NULL, "H5Oclose H5R_OBJECT1 failed");
|
|
}
|
|
|
|
break;
|
|
case H5R_DATASET_REGION1:
|
|
H5TOOLS_DEBUG("ref_type is H5R_DATASET_REGION1");
|
|
h5tools_str_append(str, H5_TOOLS_DATASET);
|
|
h5tools_str_sprint_reference(str, ref_vp);
|
|
break;
|
|
case H5R_OBJECT2:
|
|
H5TOOLS_DEBUG("ref_type is H5R_OBJECT2");
|
|
switch (obj_type) {
|
|
case H5O_TYPE_GROUP:
|
|
h5tools_str_append(str, H5_TOOLS_GROUP);
|
|
break;
|
|
|
|
case H5O_TYPE_DATASET:
|
|
h5tools_str_append(str, H5_TOOLS_DATASET);
|
|
break;
|
|
|
|
case H5O_TYPE_NAMED_DATATYPE:
|
|
h5tools_str_append(str, H5_TOOLS_DATATYPE);
|
|
break;
|
|
|
|
case H5O_TYPE_MAP:
|
|
case H5O_TYPE_UNKNOWN:
|
|
case H5O_TYPE_NTYPES:
|
|
default:
|
|
h5tools_str_append(str, H5_TOOLS_UNKNOWN);
|
|
break;
|
|
} /* end switch */
|
|
h5tools_str_sprint_reference(str, ref_vp);
|
|
break;
|
|
case H5R_DATASET_REGION2:
|
|
H5TOOLS_DEBUG("ref_type is H5R_DATASET_REGION2");
|
|
h5tools_str_append(str, H5_TOOLS_DATASET);
|
|
h5tools_str_sprint_reference(str, ref_vp);
|
|
break;
|
|
case H5R_ATTR:
|
|
H5TOOLS_DEBUG("ref_type is H5R_ATTR");
|
|
h5tools_str_append(str, H5_TOOLS_ATTRIBUTE);
|
|
h5tools_str_sprint_reference(str, ref_vp);
|
|
break;
|
|
case H5R_BADTYPE:
|
|
case H5R_MAXTYPE:
|
|
default:
|
|
break;
|
|
} /* end switch */
|
|
H5TOOLS_DEBUG("H5T_REFERENCE:H5T_STD_REF end");
|
|
}
|
|
else if (H5Tequal(type, H5T_STD_REF_DSETREG)) {
|
|
/* if(nsize == H5R_DSET_REG_REF_BUF_SIZE) */
|
|
H5TOOLS_DEBUG("H5T_REFERENCE:H5T_STD_REF_DSETREG");
|
|
}
|
|
else if (H5Tequal(type, H5T_STD_REF_OBJ)) {
|
|
/* if (nsize == H5R_OBJ_REF_BUF_SIZE) */
|
|
H5TOOLS_DEBUG("H5T_REFERENCE:H5T_STD_REF_OBJ");
|
|
} /* end else if (H5Tequal(type, H5T_STD_REF_OBJ)) */
|
|
}
|
|
break;
|
|
|
|
case H5T_ARRAY: {
|
|
int k, ndims;
|
|
hsize_t i, dims[H5S_MAX_RANK], temp_nelmts;
|
|
static int is_next_arry_elmt = 0;
|
|
|
|
H5TOOLS_DEBUG("H5T_ARRAY");
|
|
/* Get the array's base datatype for each element */
|
|
memb = H5Tget_super(type);
|
|
size = H5Tget_size(memb);
|
|
ndims = H5Tget_array_ndims(type);
|
|
H5Tget_array_dims2(type, dims);
|
|
HDassert(ndims >= 1 && ndims <= H5S_MAX_RANK);
|
|
|
|
/* Calculate the number of array elements */
|
|
for (k = 0, nelmts = 1; k < ndims; k++) {
|
|
temp_nelmts = nelmts;
|
|
temp_nelmts *= dims[k];
|
|
HDassert(temp_nelmts == (hsize_t)((size_t)temp_nelmts));
|
|
nelmts = (size_t)temp_nelmts;
|
|
}
|
|
/* Print the opening bracket */
|
|
h5tools_str_append(str, "%s", OPT(info->arr_pre, "["));
|
|
|
|
ctx->indent_level++;
|
|
|
|
for (i = 0; i < nelmts; i++) {
|
|
if (i)
|
|
h5tools_str_append(str, "%s", OPT(info->arr_sep, "," OPTIONAL_LINE_BREAK));
|
|
|
|
if (info->arr_linebreak && i && i % dims[ndims - 1] == 0) {
|
|
h5tools_str_append(str, "%s", "\n");
|
|
h5tools_str_indent(str, info, ctx);
|
|
|
|
} /* end if */
|
|
else if (i && info->arr_sep) {
|
|
/* if next element begin, add next line with indent */
|
|
if (is_next_arry_elmt) {
|
|
is_next_arry_elmt = 0;
|
|
|
|
h5tools_str_append(str, "%s", "\n ");
|
|
h5tools_str_indent(str, info, ctx);
|
|
}
|
|
/* otherwise just add space */
|
|
else
|
|
h5tools_str_append(str, " ");
|
|
|
|
} /* end else if */
|
|
|
|
/* Dump values in an array element */
|
|
is_next_arry_elmt = 0; /* dump all values in the array element, so turn it off */
|
|
h5tools_str_sprint(str, info, container, memb, cp_vp + i * size, ctx);
|
|
} /* end for */
|
|
|
|
ctx->indent_level--;
|
|
|
|
/* Print the closing bracket */
|
|
h5tools_str_append(str, "%s", OPT(info->arr_suf, "]"));
|
|
is_next_arry_elmt = 1; /* set for begining of next array element */
|
|
H5Tclose(memb);
|
|
} break;
|
|
|
|
case H5T_VLEN: {
|
|
unsigned int i;
|
|
|
|
H5TOOLS_DEBUG("H5T_VLEN");
|
|
/* Get the VL sequences's base datatype for each element */
|
|
memb = H5Tget_super(type);
|
|
size = H5Tget_size(memb);
|
|
|
|
/* Print the opening bracket */
|
|
h5tools_str_append(str, "%s", OPT(info->vlen_pre, "("));
|
|
|
|
/* Get the number of sequence elements */
|
|
nelmts = ((hvl_t *)((void *)cp_vp))->len;
|
|
|
|
for (i = 0; i < nelmts; i++) {
|
|
if (i)
|
|
h5tools_str_append(str, "%s", OPT(info->vlen_sep, "," OPTIONAL_LINE_BREAK));
|
|
|
|
#ifdef LATER
|
|
/* Need to fix so VL data breaks at correct location on end of line -QAK */
|
|
if (info->arr_linebreak && h5tools_str_len(str) >= info->line_ncols) {
|
|
int x;
|
|
|
|
h5tools_str_append(str, "%s", "\n");
|
|
|
|
/* need to indent some more here */
|
|
if (ctx->indent_level >= 0)
|
|
h5tools_str_append(str, "%s", OPT(info->line_pre, ""));
|
|
|
|
for (x = 0; x < ctx->indent_level + 1; x++)
|
|
h5tools_str_append(str, "%s", OPT(info->line_indent, ""));
|
|
} /* end if */
|
|
#endif /* LATER */
|
|
|
|
ctx->indent_level++;
|
|
|
|
/* Dump the array element */
|
|
h5tools_str_sprint(str, info, container, memb,
|
|
((char *)(((hvl_t *)((void *)cp_vp))->p)) + i * size, ctx);
|
|
|
|
ctx->indent_level--;
|
|
} /* end for */
|
|
|
|
h5tools_str_append(str, "%s", OPT(info->vlen_suf, ")"));
|
|
H5Tclose(memb);
|
|
} break;
|
|
|
|
case H5T_TIME:
|
|
case H5T_BITFIELD:
|
|
case H5T_OPAQUE: {
|
|
/* All other types get printed as hexadecimal */
|
|
size_t i;
|
|
|
|
H5TOOLS_DEBUG("OTHER");
|
|
if (1 == nsize)
|
|
h5tools_str_append(str, "0x%02x", ucp_vp[0]);
|
|
else
|
|
for (i = 0; i < nsize; i++)
|
|
h5tools_str_append(str, "%s%02x", i ? ":" : "", ucp_vp[i]);
|
|
} break;
|
|
|
|
case H5T_NO_CLASS:
|
|
case H5T_NCLASSES:
|
|
default:
|
|
h5tools_str_append(str, "invalid datatype");
|
|
break;
|
|
} /* end switch */
|
|
}
|
|
|
|
ret_value = h5tools_str_fmt(str, start, OPT(info->elmt_fmt, "%s"));
|
|
|
|
H5TOOLS_ENDDEBUG(" with %s", ret_value);
|
|
return ret_value;
|
|
}
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* Function: h5tools_str_sprint_reference
|
|
*
|
|
* Purpose: Object reference -- show the name of the referenced object.
|
|
*
|
|
* Return: Nothing
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
void
|
|
h5tools_str_sprint_reference(h5tools_str_t *str, H5R_ref_t *ref_vp)
|
|
{
|
|
ssize_t buf_size;
|
|
|
|
H5TOOLS_START_DEBUG(" ");
|
|
|
|
h5tools_str_append(str, " \"");
|
|
buf_size = H5Rget_file_name(ref_vp, NULL, 0);
|
|
H5TOOLS_DEBUG("buf_size=%ld", buf_size);
|
|
if (buf_size) {
|
|
char *file_name = (char *)HDmalloc(sizeof(char) * (size_t)buf_size + 1);
|
|
if (H5Rget_file_name(ref_vp, file_name, (size_t)buf_size + 1) >= 0) {
|
|
file_name[buf_size] = '\0';
|
|
H5TOOLS_DEBUG("name=%s", file_name);
|
|
h5tools_str_append(str, "%s", file_name);
|
|
}
|
|
HDfree(file_name);
|
|
}
|
|
|
|
buf_size = H5Rget_obj_name(ref_vp, H5P_DEFAULT, NULL, 0);
|
|
H5TOOLS_DEBUG("buf_size=%ld", buf_size);
|
|
if (buf_size) {
|
|
char *obj_name = (char *)HDmalloc(sizeof(char) * (size_t)buf_size + 1);
|
|
if (H5Rget_obj_name(ref_vp, H5P_DEFAULT, obj_name, (size_t)buf_size + 1) >= 0) {
|
|
obj_name[buf_size] = '\0';
|
|
H5TOOLS_DEBUG("name=%s", obj_name);
|
|
h5tools_str_append(str, "%s", obj_name);
|
|
}
|
|
HDfree(obj_name);
|
|
}
|
|
|
|
if (H5Rget_type(ref_vp) == H5R_ATTR) {
|
|
buf_size = H5Rget_attr_name(ref_vp, NULL, 0);
|
|
H5TOOLS_DEBUG("buf_size=%ld", buf_size);
|
|
if (buf_size) {
|
|
char *attr_name = (char *)HDmalloc(sizeof(char) * (size_t)buf_size + 1);
|
|
if (H5Rget_attr_name(ref_vp, attr_name, (size_t)buf_size + 1) >= 0) {
|
|
attr_name[buf_size] = '\0';
|
|
H5TOOLS_DEBUG("name=%s", attr_name);
|
|
h5tools_str_append(str, "/%s", attr_name);
|
|
}
|
|
HDfree(attr_name);
|
|
}
|
|
}
|
|
h5tools_str_append(str, "\"");
|
|
|
|
H5TOOLS_ENDDEBUG(" ");
|
|
}
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* Function: h5tools_escape
|
|
*
|
|
* Purpose: Changes all "funny" characters in S into standard C escape
|
|
* sequences.
|
|
*
|
|
* Return: Success: S
|
|
*
|
|
* Failure: NULL if the buffer would overflow. The
|
|
* buffer has as many left-to-right escapes as
|
|
* possible before overflow would have happened.
|
|
*
|
|
* Programmer: Robb Matzke
|
|
* Monday, April 26, 1999
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
static char *
|
|
h5tools_escape(char *s /*in,out*/, size_t size)
|
|
{
|
|
register size_t i;
|
|
const char * escape;
|
|
char octal[8];
|
|
size_t n = HDstrlen(s);
|
|
|
|
for (i = 0; i < n; i++) {
|
|
switch (s[i]) {
|
|
case '\'':
|
|
escape = "\\\'";
|
|
break;
|
|
case '\"':
|
|
escape = "\\\"";
|
|
break;
|
|
case '\\':
|
|
escape = "\\\\";
|
|
break;
|
|
case '\?':
|
|
escape = "\\\?";
|
|
break;
|
|
case '\a':
|
|
escape = "\\a";
|
|
break;
|
|
case '\b':
|
|
escape = "\\b";
|
|
break;
|
|
case '\f':
|
|
escape = "\\f";
|
|
break;
|
|
case '\n':
|
|
escape = "\\n";
|
|
break;
|
|
case '\r':
|
|
escape = "\\r";
|
|
break;
|
|
case '\t':
|
|
escape = "\\t";
|
|
break;
|
|
case '\v':
|
|
escape = "\\v";
|
|
break;
|
|
default:
|
|
if (!isprint(s[i])) {
|
|
HDsnprintf(octal, sizeof(octal), "\\%03o", (unsigned char)s[i]);
|
|
escape = octal;
|
|
}
|
|
else
|
|
escape = NULL;
|
|
|
|
break;
|
|
}
|
|
|
|
if (escape) {
|
|
size_t esc_size = HDstrlen(escape);
|
|
|
|
if (n + esc_size + 1 > size)
|
|
/*would overflow*/
|
|
return NULL;
|
|
|
|
HDmemmove(s + i + esc_size, s + i + 1, n - i); /*make room*/
|
|
HDmemcpy(s + i, escape, esc_size); /*insert*/
|
|
n += esc_size - 1; /* adjust total string size */
|
|
i += esc_size; /* adjust string position */
|
|
}
|
|
}
|
|
|
|
return s;
|
|
}
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* Function: h5tools_str_is_zero
|
|
*
|
|
* Purpose: Determines if memory is initialized to all zero bytes.
|
|
*
|
|
* Return: TRUE if all bytes are zero; FALSE otherwise
|
|
*
|
|
* Programmer: Robb Matzke
|
|
* Monday, June 7, 1999
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
static hbool_t
|
|
h5tools_str_is_zero(const void *_mem, size_t size)
|
|
{
|
|
const unsigned char *mem = (const unsigned char *)_mem;
|
|
|
|
while (size-- > 0)
|
|
if (mem[size])
|
|
return FALSE;
|
|
|
|
return TRUE;
|
|
}
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* Function: h5tools_str_replace
|
|
*
|
|
* Purpose: replace all occurrences of substring.
|
|
*
|
|
* Return: char *
|
|
*
|
|
* Programmer: Peter Cao
|
|
* March 8, 2012
|
|
*
|
|
* Notes:
|
|
* Applications need to call free() to free the memoery allocated for
|
|
* the return string
|
|
*
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
char *
|
|
h5tools_str_replace(const char *string, const char *substr, const char *replacement)
|
|
{
|
|
char *tok = NULL;
|
|
char *newstr = NULL;
|
|
char *head = NULL;
|
|
|
|
if (substr == NULL || replacement == NULL)
|
|
return HDstrdup(string);
|
|
newstr = HDstrdup(string);
|
|
head = newstr;
|
|
while ((tok = HDstrstr(head, substr))) {
|
|
char *oldstr;
|
|
|
|
oldstr = newstr;
|
|
newstr = (char *)HDmalloc(HDstrlen(oldstr) - HDstrlen(substr) + HDstrlen(replacement) + 1);
|
|
|
|
if (newstr == NULL) {
|
|
HDfree(oldstr);
|
|
return NULL;
|
|
}
|
|
HDmemcpy(newstr, oldstr, (size_t)(tok - oldstr));
|
|
HDmemcpy(newstr + (tok - oldstr), replacement, HDstrlen(replacement));
|
|
HDmemcpy(newstr + (tok - oldstr) + HDstrlen(replacement), tok + HDstrlen(substr),
|
|
HDstrlen(oldstr) - HDstrlen(substr) - (size_t)(tok - oldstr));
|
|
HDmemset(newstr + HDstrlen(oldstr) - HDstrlen(substr) + HDstrlen(replacement), 0, 1);
|
|
/* move back head right after the last replacement */
|
|
head = newstr + (tok - oldstr) + HDstrlen(replacement);
|
|
HDfree(oldstr);
|
|
}
|
|
|
|
return newstr;
|
|
}
|