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---------------------- ./html/H5.format.html ./src/H5E.c ./src/H5Epublic.h ./src/H5F.c ./src/H5G.c ./src/H5Gent.c ./src/H5Gnode.c ./src/H5Gprivate.h ./src/h5ls.c ./test/Makefile.in Symbolic links are now supported. The ./test/links program will create a `links.h5' file that demonstrates hard links, soft links, dangling links, and recursive links. A symbolic link is a symbol table entity and doesn't have an object header. It's format is described in H5.format.hml. ./src/H5G.c ./src/H5Gpublic.h ./src/h5ls.c Implemented H5Gstat() and H5Gget_linkval() as documented by Quincey. The `H5G_type_t type' field of `H5G_stat_t' was changed to `int type' because H5G_type_t was already used and the `type' data type should be open-ended. ./src/H5Ffamily.c Removed an incorrect diagnostic message. ./test/big.c Added read/write calls to test partial I/O to big contiguous datasets. With no arguments it writes to a dataset and prints the list of points written which should be redirected to a file. With an argument (the name of a file containing the stdout of a run with no arguments) values are read from the dataset. One would typically say `big >x && big x'.
204 lines
4.8 KiB
C
204 lines
4.8 KiB
C
/*
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* Copyright (C) 1998 NCSA
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* All rights reserved.
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*
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* Programmer: Robb Matzke <matzke@llnl.gov>
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* Wednesday, April 8, 1998
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*/
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#include <assert.h>
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#include <ctype.h>
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#include <hdf5.h>
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#include <math.h>
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#include <stdlib.h>
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#include <H5private.h> /*needed for HDfprintf() */
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#define FNAME "big%05d.h5"
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#define WRT_N 50
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#define WRT_SIZE 4*1024
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static hsize_t
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randll (hsize_t limit)
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{
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hsize_t acc = rand ();
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acc *= rand ();
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return acc % limit;
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}
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/*-------------------------------------------------------------------------
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* Function: main
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*
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* Purpose: Creates a *big* dataset.
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*
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* Return: Success:
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*
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* Failure:
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*
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* Programmer: Robb Matzke
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* Wednesday, April 8, 1998
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*
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* Modifications:
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*
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*-------------------------------------------------------------------------
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*/
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static void
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writer (int wrt_n)
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{
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hsize_t size1[4] = {8, 1024, 1024, 1024};
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hsize_t size2[1] = {8589934592LL};
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hssize_t hs_start[1];
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hsize_t hs_size[1];
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hid_t plist, file, space1, space2, mem_space, d1, d2;
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int *buf = malloc (sizeof(int) * WRT_SIZE);
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int i, j;
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/*
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* Make sure that `hsize_t' is large enough to represent the entire data
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* space.
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*/
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assert (sizeof(hsize_t)>4);
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/*
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* We might be on a machine that has 32-bit files, so create an HDF5 file
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* which is a family of files. Each member of the family will be 1GB
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*/
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plist = H5Pcreate (H5P_FILE_ACCESS);
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H5Pset_family (plist, 30, H5P_DEFAULT);
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file = H5Fcreate (FNAME, H5F_ACC_TRUNC, H5P_DEFAULT, plist);
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/* Create simple data spaces according to the size specified above. */
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space1 = H5Screate_simple (4, size1, size1);
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space2 = H5Screate_simple (1, size2, size2);
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/* Create the datasets */
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d1 = H5Dcreate (file, "d1", H5T_NATIVE_INT, space1, H5P_DEFAULT);
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d2 = H5Dcreate (file, "d2", H5T_NATIVE_INT, space2, H5P_DEFAULT);
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/* Write some things to them randomly */
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hs_size[0] = WRT_SIZE;
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mem_space = H5Screate_simple (1, hs_size, hs_size);
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for (i=0; i<wrt_n; i++) {
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hs_start[0] = randll (size2[0]);
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HDfprintf (stdout, "#%03d 0x%016Hx\n", i, hs_start[0]);
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H5Sset_hyperslab (space2, hs_start, hs_size, NULL);
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for (j=0; j<WRT_SIZE; j++) {
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buf[j] = i+1;
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}
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H5Dwrite (d2, H5T_NATIVE_INT, mem_space, space2, H5P_DEFAULT, buf);
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}
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H5Dclose (d1);
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H5Dclose (d2);
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H5Sclose (mem_space);
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H5Sclose (space1);
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H5Sclose (space2);
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H5Fclose (file);
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free (buf);
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}
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/*-------------------------------------------------------------------------
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* Function: reader
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*
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* Purpose: Reads some data from random locations in the dataset.
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*
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* Return: void
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*
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* Programmer: Robb Matzke
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* Friday, April 10, 1998
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*
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* Modifications:
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*
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*-------------------------------------------------------------------------
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*/
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static void
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reader (const char *script_name)
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{
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FILE *script;
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hid_t plist, file, mspace, fspace, d2;
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char ln[64], *s;
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hssize_t hs_offset[1];
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hsize_t hs_size[1] = {WRT_SIZE};
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int *buf = malloc (sizeof(int) * WRT_SIZE);
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int i, j, zero, wrong;
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/* Open script file */
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script = fopen (script_name, "r");
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/* Open HDF5 file */
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plist = H5Pcreate (H5P_FILE_ACCESS);
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H5Pset_family (plist, 30, H5P_DEFAULT);
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file = H5Fopen (FNAME, H5F_ACC_RDONLY, plist);
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/* Open the dataset */
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d2 = H5Dopen (file, "d2");
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fspace = H5Dget_space (d2);
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/* Describe `buf' */
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mspace = H5Screate_simple (1, hs_size, hs_size);
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/* Read each region */
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while (fgets (ln, sizeof(ln), script)) {
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if ('#'!=ln[0]) break;
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i = strtol (ln+1, &s, 10);
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hs_offset[0] = HDstrtoll (s, NULL, 0);
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HDfprintf (stdout, "#%03d 0x%016Hx", i, hs_offset[0]);
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fflush (stdout);
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H5Sset_hyperslab (fspace, hs_offset, hs_size, NULL);
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H5Dread (d2, H5T_NATIVE_INT, mspace, fspace, H5P_DEFAULT, buf);
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/* Check */
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for (j=zero=wrong=0; j<WRT_SIZE; j++) {
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if (0==buf[j]) zero++;
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else if (buf[j]!=i+1) wrong++;
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}
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if (zero) {
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printf (" *FAILED* (%d zeros)\n", zero);
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} else if (wrong) {
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printf (" *SKIPPED* (possible overlap with another region)\n");
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} else {
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printf (" PASSED\n");
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}
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}
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H5Dclose (d2);
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H5Sclose (mspace);
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H5Sclose (fspace);
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H5Fclose (file);
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fclose (script);
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}
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/*-------------------------------------------------------------------------
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* Function: main
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*
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* Purpose:
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*
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* Return: Success:
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*
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* Failure:
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*
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* Programmer: Robb Matzke
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* Friday, April 10, 1998
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*
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* Modifications:
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*
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*-------------------------------------------------------------------------
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*/
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int
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main (int argc, char *argv[])
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{
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if (1==argc) {
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writer (WRT_N);
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} else if (isdigit (argv[1][0])) {
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writer (strtol (argv[1], NULL, 0));
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} else {
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reader (argv[1]);
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}
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return 0;
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}
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