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9918e0e06e
Purpose: add h4toh5 converter source codes under tools directory. Description: [describe the bug, or describe the new feature, etc] Solution: [details about the changes, algorithm, etc...] [Please as detail as you can since your own explanation is better than others guessing it from the code.] Platforms tested: [machines you have tested the changed version. This is absolute important. Test it out on at least two or three different platforms such as Big-endian-32bit (SUN/IRIX), little-endian-32(LINUX) and 64-bit (IRIX64/UNICOS/DEC-ALPHA) would be good.]
893 lines
23 KiB
C
893 lines
23 KiB
C
#include "h4toh5main.h"
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/*-------------------------------------------------------------------------
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* Function: Sds_h4_to_h5
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*
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* Purpose: translate SDS object into hdf5 dataset
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*
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* Return: FAIL if failed, SUCCEED if successful.
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*
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* In :
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sds_id: SDS identifier
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h5_group: hdf5 group id
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h5_dimgroup: hdf5 dimension group id
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dim_pathname: dimensional path name
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*-------------------------------------------------------------------------
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*/
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int Sds_h4_to_h5(int32 file_id,int32 sds_id,hid_t h5_group,hid_t h5_dimgroup){
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int32 sds_dtype;
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int32 sds_rank;
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int32 sds_dimsizes[MAX_VAR_DIMS];
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int32* sds_start;
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int32* sds_edge;
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int32* sds_stride;
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int32 count_sdsdata;
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int32 sds_ref;
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int32 istat;
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int i;
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int empty;
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int32 num_sdsattrs;
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void* sds_data;
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int check_sdsname;
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int check_gloattr;
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char sdsname[MAX_NC_NAME];
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char sdslabel[MAX_NC_NAME];
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size_t h4size;
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size_t h4memsize;
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/* define varibles for hdf5. */
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hid_t h5dset;
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hid_t h5d_sid;
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hid_t h5ty_id;
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hid_t h5_memtype;
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hid_t h5str_type;
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hid_t h5str_memtype;
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hsize_t h5dims[MAX_VAR_DIMS];
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char* h5csds_name;
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herr_t ret;
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/* check whether the sds is empty. */
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#if 0
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if(SDcheckempty(sds_id,&empty)== FAIL) {
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printf("error in running SDcheckempty routine. \n");
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return FAIL;
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}
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printf("empty %d\n",empty);
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if(empty != 0) return SUCCEED;
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#endif
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/*check whether the sds is created with unlimited dimension. */
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if(SDisrecord(sds_id)) {
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if (SDgetinfo(sds_id,sdsname,&sds_rank,sds_dimsizes,&sds_dtype,
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&num_sdsattrs)==FAIL) {
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printf("unable to get information of sds h5dset.\n");
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return FAIL;
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}
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}
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else {
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/*obtain name,rank,dimsizes,datatype and num of attributes of sds */
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if (SDgetinfo(sds_id,sdsname,&sds_rank,sds_dimsizes,&sds_dtype,
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&num_sdsattrs)==FAIL) {
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printf("unable to get information of sds h5dset.\n");
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return FAIL;
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}
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}
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/* if(sdsname !=NULL) printf("sdsname %s\n",sdsname);*/
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/* obtain start,edge, stride and number of sds data. */
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sds_start = malloc(sizeof(int32)*sds_rank);
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if(sds_start == NULL) {
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printf("error in allocating memory for sds start.\n");
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return FAIL;
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}
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sds_edge = malloc(sizeof(int32)*sds_rank);
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if(sds_edge == NULL) {
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printf("error in allocating memory for sds edge.\n");
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free(sds_start);
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return FAIL;
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}
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sds_stride = malloc(sizeof(int32)*sds_rank);
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if(sds_stride == NULL) {
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printf("error in allocating memory for sds stride. \n");
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free(sds_start);
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free(sds_edge);
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return FAIL;
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}
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count_sdsdata = 1;
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for (i=0;i<sds_rank;i++){
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sds_stride[i] = 1;
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sds_start[i] = 0;
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sds_edge[i] = sds_dimsizes[i];
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count_sdsdata = count_sdsdata*sds_dimsizes[i];
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}
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for (i=0;i<sds_rank;i++)
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h5dims[i] = sds_edge[i]-sds_start[i];
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/* convert hdf4 data type to hdf5 data type. */
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if (h4type_to_h5type(sds_dtype,&h5_memtype,&h4memsize,&h4size,
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&h5ty_id) == FAIL) {
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printf("failed to translate datatype. \n");
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free(sds_start);
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free(sds_edge);
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free(sds_stride);
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return FAIL;
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}
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/* check whether the datatype is string, if we find string format,
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we will change them back into integer format.*/
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if (h5ty_id == H5T_STRING) {
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/* rechange string datatype into numerical datatype.*/
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if(h5string_to_int(sds_dtype,&h5_memtype,h4memsize,
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&h5ty_id)== FAIL) {
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printf("error in translating H5T_STRING to int.\n");
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free(sds_start);
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free(sds_edge);
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free(sds_stride);
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return FAIL;
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}
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}
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sds_data = malloc(h4memsize*count_sdsdata);
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if(sds_data == NULL) {
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printf("error in allocating memory. \n");
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free(sds_start);
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free(sds_edge);
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free(sds_stride);
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return FAIL;
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}
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istat = SDreaddata(sds_id, sds_start, sds_stride, sds_edge,
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(VOIDP)sds_data);
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if (istat == FAIL) {
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printf("unable to read data from h5dset. \n");
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free(sds_start);
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free(sds_edge);
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free(sds_stride);
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free(sds_data);
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return FAIL;
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}
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/* obtaining reference number and name of h5 dataset
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corresponding to sds. */
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sds_ref = SDidtoref(sds_id);
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if(sds_ref == FAIL) {
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printf("error in obtaining sds reference number. \n");
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free(sds_start);
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free(sds_edge);
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free(sds_stride);
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free(sds_data);
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return FAIL;
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}
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h5csds_name = get_name(sds_ref,2*num_sds,sds_hashtab,&check_sdsname);
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if (h5csds_name == NULL && check_sdsname == 0 ) {
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free(sds_start);
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free(sds_edge);
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free(sds_stride);
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free(sds_data);
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printf("error,cannot find sds name \n");
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return FAIL;
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}
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if (h5csds_name == NULL && check_sdsname == -1) {
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free(sds_start);
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free(sds_edge);
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free(sds_stride);
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free(sds_data);
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printf("error,sds name is not defined.\n");
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return FAIL;
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}
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if (h5csds_name == NULL && check_sdsname == -2) {
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free(sds_start);
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free(sds_edge);
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free(sds_stride);
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free(sds_data);
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printf("error,not enough memory for allocating sds name.\n");
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return FAIL;
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}
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h5d_sid = H5Screate_simple(sds_rank,h5dims,NULL);
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if (h5d_sid < 0) {
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printf("failed to create hdf5 data space converted from SDS. \n");
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free(sds_start);
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free(sds_edge);
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free(sds_stride);
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free(sds_data);
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return FAIL;
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}
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h5dset = H5Dcreate(h5_group,h5csds_name,h5ty_id,h5d_sid,H5P_DEFAULT);
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if (h5dset < 0) {
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printf("failed to create hdf5 dataset converted from SDS. \n");
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free(sds_start);
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free(sds_edge);
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free(sds_stride);
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free(sds_data);
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H5Sclose(h5d_sid);
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return FAIL;
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}
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if (H5Dwrite(h5dset,h5_memtype,h5d_sid,h5d_sid,H5P_DEFAULT,
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(void *)sds_data)<0) {
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printf("failed to write data into hdf5 dataset");
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printf(" converted from SDS.\n");
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H5Sclose(h5d_sid);
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H5Dclose(h5dset);
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free(sds_start);
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free(sds_edge);
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free(sds_stride);
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free(sds_data);
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return FAIL;
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}
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/* convert sds annotation into attribute of sds dataset.
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Since there is no routines to find the exact tag of sds object,
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we will check three possible object tags of sds objects, that is:
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DFTAG_SD,DFTAG_SDG,DFTAG_NDG. If the object tag of sds object is
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falling out of this scope, we will not convert annotations into
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hdf5 attributes; it is user's responsibility to make sure object tags
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for sds objects are only one of the above three tags.*/
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if(Annoobj_h4_to_h5(file_id,sds_ref,DFTAG_SD,h5dset)== FAIL){
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printf("failed to convert sds annotation into hdf5 attribute.\n");
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free(sds_start);
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free(sds_edge);
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free(sds_stride);
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free(sds_data);
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return FAIL;
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}
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if(Annoobj_h4_to_h5(file_id,sds_ref,DFTAG_SDG,h5dset)== FAIL){
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printf("failed to convert sds annotation into hdf5 attribute.\n");
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free(sds_start);
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free(sds_edge);
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free(sds_stride);
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free(sds_data);
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return FAIL;
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}
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if(Annoobj_h4_to_h5(file_id,sds_ref,DFTAG_NDG,h5dset)== FAIL){
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printf("failed to convert sds annotation into hdf5 attribute.\n");
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free(sds_start);
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free(sds_edge);
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free(sds_stride);
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free(sds_data);
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return FAIL;
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}
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/* convert sds dimensional scale dataset into hdf5 dataset. */
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if(sdsdim_to_h5dataset(sds_id,sds_rank,h5dset,h5_dimgroup,sds_dimsizes[0]) == FAIL) {
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printf("failed to convert dimensional scale to hdf5 dataset. \n");
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free(sds_start);
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free(sds_edge);
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free(sds_stride);
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free(sds_data);
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return FAIL;
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}
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check_gloattr = 0;
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if (sds_transattrs(sds_id,h5dset,num_sdsattrs,check_gloattr)==FAIL) {
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free(sds_start);
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free(sds_edge);
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free(sds_stride);
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free(sds_data);
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printf(" Error in obtaining sds attributes. \n");
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return FAIL;
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}
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/********************************************/
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/* handle extra attributes of sds : sds label, object type
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and reference num */
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strcpy(sdslabel,SDSLABEL);
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if(h4_transpredattrs(h5dset,HDF4_OBJECT_TYPE,sdslabel)==FAIL) {
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free(sds_start);
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free(sds_edge);
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free(sds_stride);
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free(sds_data);
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printf("unable to transfer sds label to HDF4 OBJECT TYPE.\n");
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return FAIL;
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}
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if(sdsname != NULL) {
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if(h4_transpredattrs(h5dset,HDF4_OBJECT_NAME,sdsname)==FAIL){
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free(sds_start);
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free(sds_edge);
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free(sds_stride);
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free(sds_data);
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printf("unable to transfer sds name to HDF5 dataset attribute.\n");
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return FAIL;
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}
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}
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if(h4_transnumattr(h5dset,HDF4_REF_NUM,sds_ref)==FAIL){
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free(sds_start);
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free(sds_edge);
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free(sds_stride);
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free(sds_data);
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printf("unable to transfer sds ref. to HDF5 dataset attribute.\n");
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return FAIL;
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}
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istat = SDendaccess(sds_id);
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ret = H5Sclose(h5d_sid);
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ret = H5Dclose(h5dset);
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free(h5csds_name);
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free(sds_data);
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free(sds_start);
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free(sds_edge);
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free(sds_stride);
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return SUCCEED;
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}
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/*-------------------------------------------------------------------------
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* Function: sds_transattrs
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*
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* Purpose: translate attribute of HDF4 SDS object into
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hdf5 dataset attribute
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*
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* Return: FAIL if failed, SUCCEED if successful.
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*
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* In :
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ssds_id: SDS identifier
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sh5_dset: hdf5 dataset
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snum_sdsattrs: number of sds attribute
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check_gloflag: a flag that check whether the attribute is
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a file attribute or a sds id or a dimensional scale id.
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*-------------------------------------------------------------------------
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*/
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int sds_transattrs(int32 ssds_id, hid_t sh5_dset,int snum_sdsattrs,
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int check_gloflag) {
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char ssdsatrr_name[2*MAX_NC_NAME];
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char sdsglo[MAX_NC_NAME];
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char* sdsrepattr_name;
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int32 count_ssdsadata;
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int32 ssds_atype;
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size_t sh4_amemsize;
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size_t sh4_asize;
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hid_t sh5a_sid;
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hid_t sh5a_id;
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hid_t sh5_atype;
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hid_t sh5_amemtype;
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hid_t sh5str_type;
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hid_t sh5str_memtype;
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hsize_t sh5dims[MAX_VAR_DIMS];
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void* ssds_adata;
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herr_t sret;
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int i;
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for (i = 0;i < snum_sdsattrs; i++) {
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if (SDattrinfo(ssds_id,i,ssdsatrr_name,&ssds_atype,
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&count_ssdsadata)==FAIL){
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printf("unable to obtain SDS attribute information. \n");
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return FAIL;
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}
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/* make a table for the attribute type, to do the corresponding type. */
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if(h4type_to_h5type(ssds_atype,&sh5_amemtype,&sh4_amemsize,
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&sh4_asize,&sh5_atype)== FAIL) {
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printf("fail to translate sds attribute data type from H4 to H5. \n");
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return FAIL;
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}
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ssds_adata = malloc(sh4_amemsize * count_ssdsadata);
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if(ssds_adata == NULL) {
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printf("error, cannot allocate memory for sds attribute data. \n");
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return FAIL;
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}
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if(SDreadattr(ssds_id,i,(VOIDP)ssds_adata)== FAIL) {
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printf("error in reading attributes of sds object. \n");
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free(ssds_adata);
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return FAIL;
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}
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/* if attribute doesn't have name, a default name is set. */
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if(ssdsatrr_name[0] == '\0') {
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sdsrepattr_name = trans_obj_name(DFTAG_NDG,i);
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strcpy(ssdsatrr_name,sdsrepattr_name);
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free(sdsrepattr_name);
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}
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/* if the sds attribute is a file attribute. */
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if(check_gloflag == 1){
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strcpy(sdsglo,GLOSDS);
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strcat(ssdsatrr_name,"_");
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strcat(ssdsatrr_name,sdsglo);
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}
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/* now do attribute-transferring.
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1. deal with string data type
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2. set attribute space.
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3. get attribute name, set property list. */
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if (sh5_atype == H5T_STRING) {
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sh5a_sid = H5Screate(H5S_SCALAR);
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if (sh5a_sid < 0) {
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printf("failed to create attribute space for");
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printf(" HDF4_OBJECT_TYPE SDS. \n");
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free(ssds_adata);
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return FAIL;
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}
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if ((sh5str_type = mkstr(count_ssdsadata,
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H5T_STR_NULLTERM))<0) {
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printf("error in making string. \n");
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H5Sclose(sh5a_sid);
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free(ssds_adata);
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return FAIL;
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}
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/* check this line later. */
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if ((sh5str_memtype = mkstr(count_ssdsadata*sh4_amemsize,
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H5T_STR_NULLTERM))<0) {
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printf("error in making memory string. \n");
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H5Sclose(sh5a_sid);
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free(ssds_adata);
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return FAIL;
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}
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sh5a_id = H5Acreate(sh5_dset,ssdsatrr_name,sh5str_type,
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sh5a_sid,H5P_DEFAULT);
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if (sh5a_id <0) {
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printf("failed to obtain attribute id for");
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printf(" HDF4_OBJECT_TYPE SDS. \n");
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H5Sclose(sh5a_sid);
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free(ssds_adata);
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return FAIL;
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}
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sret = H5Awrite(sh5a_id,sh5str_memtype,(void *)ssds_adata);
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if (sret <0) {
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printf("failed to write attribute data for");
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printf(" HDF4_OBJECT_TYPE SDS. \n");
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H5Sclose(sh5a_sid);
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H5Aclose(sh5a_id);
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free(ssds_adata);
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return FAIL;
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}
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sret = H5Sclose(sh5a_sid);
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sret = H5Aclose(sh5a_id);
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}
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else {
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if(count_ssdsadata == 1) {
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sh5a_sid = H5Screate(H5S_SCALAR);
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if (sh5a_sid < 0) {
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printf("failed to create space id. \n");
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free(ssds_adata);
|
|
return FAIL;
|
|
}
|
|
}
|
|
else {
|
|
sh5dims[0] = count_ssdsadata;
|
|
sh5a_sid = H5Screate_simple(1,sh5dims,NULL);
|
|
|
|
if (sh5a_sid < 0) {
|
|
printf("failed to create attribute space. \n");
|
|
free(ssds_adata);
|
|
return FAIL;
|
|
}
|
|
}
|
|
sh5a_id = H5Acreate(sh5_dset,ssdsatrr_name,sh5_atype,
|
|
sh5a_sid,H5P_DEFAULT);
|
|
|
|
if(sh5a_id <0) {
|
|
printf("failed to obtain attribute id. \n");
|
|
H5Sclose(sh5a_sid);
|
|
free(ssds_adata);
|
|
return FAIL;
|
|
}
|
|
|
|
sret = H5Awrite(sh5a_id,sh5_amemtype,(void *)ssds_adata);
|
|
|
|
if(sret <0) {
|
|
printf("failed to write attribute data.\n ");
|
|
H5Sclose(sh5a_sid);
|
|
H5Aclose(sh5a_id);
|
|
free(ssds_adata);
|
|
return FAIL;
|
|
}
|
|
sret = H5Sclose(sh5a_sid);
|
|
sret = H5Aclose(sh5a_id);
|
|
}
|
|
free(ssds_adata);
|
|
}
|
|
return SUCCEED;
|
|
}
|
|
/****************sdsdim_to_h5dataset*******************
|
|
|
|
* Purpose: translate dimensional scale dataset into
|
|
hdf5 dataset
|
|
*
|
|
* Return: FAIL if failed, SUCCEED if successful.
|
|
*
|
|
* In :
|
|
sds_id: SDS identifier
|
|
sds_rank: number of sds dimensions
|
|
Out:
|
|
Modification:
|
|
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
|
|
int sdsdim_to_h5dataset(int32 sds_id,int32 sds_rank,hid_t sh5dset,
|
|
hid_t sh5_dimgroup,int32 firstdimsize) {
|
|
|
|
int32 sdsdim_id;
|
|
int32 sdsdim_type = 0;
|
|
int32 sds_dimscasize[1];
|
|
int32 sds_dimrank;
|
|
int32 istat;
|
|
int i;
|
|
int j;
|
|
int k;
|
|
|
|
int check_gloattr;
|
|
int32 num_sdsdimattrs;
|
|
int empty;
|
|
int check_sdsdim;
|
|
void* dim_scadata;
|
|
|
|
char sdsdim_name[MAX_NC_NAME];
|
|
char sds_name[MAX_NC_NAME];
|
|
char* cor_sdsdimname;
|
|
size_t h4dim_memsize;
|
|
size_t h4dim_size;
|
|
|
|
/* define varibles for hdf5. */
|
|
|
|
hid_t h5dim_dset;
|
|
hid_t h5dim_sid;
|
|
|
|
hid_t h5dim_tid;
|
|
hid_t h5dim_memtype;
|
|
|
|
hid_t h5dim_nameaid;
|
|
hid_t h5dim_namesid;
|
|
|
|
hid_t h5str_dimntype;
|
|
|
|
hid_t attr_refSpace;
|
|
hid_t attr_refType;
|
|
hid_t attribID;
|
|
|
|
hsize_t h5dimscas[1];
|
|
hsize_t h5dim_dims[1];
|
|
hsize_t attr_refDims[1];
|
|
hobj_ref_t dim_refdat;
|
|
hobj_ref_t* alldim_refdat;
|
|
|
|
char* h5sdsdim_name;
|
|
char h5sdsdim_allname[MAX_VAR_DIMS * MAX_NC_NAME];
|
|
char h5newsdsdim_name[MAX_NC_NAME];
|
|
char h5dimpath_name[MAX_NC_NAME];
|
|
herr_t ret;
|
|
|
|
h5dim_dims[0] = (hsize_t)sds_rank;
|
|
j = 0;
|
|
k = 0;
|
|
|
|
for (i = 0; i<sds_rank;i++) {
|
|
|
|
sdsdim_id = SDgetdimid(sds_id,i);
|
|
|
|
if(sdsdim_id == FAIL) {
|
|
printf("error in obtaining sds dimension id. \n");
|
|
return FAIL;
|
|
}
|
|
|
|
|
|
istat = SDdiminfo(sdsdim_id,sdsdim_name,sds_dimscasize,
|
|
&sdsdim_type,&num_sdsdimattrs);
|
|
|
|
if (istat == FAIL) {
|
|
printf("sds get dim. information failed. \n");
|
|
SDendaccess(sdsdim_id);
|
|
return FAIL;
|
|
}
|
|
|
|
if(sds_dimscasize[0] == 0) sds_dimscasize[0] = firstdimsize;
|
|
|
|
/* if this sds has no dimensional scale data. skip it.*/
|
|
/* if(sdsdim_type == 0) continue;*/
|
|
|
|
|
|
/* check whether this dimensional scale dataset is looked up. */
|
|
check_sdsdim = lookup_name(sdsdim_name,DIM_HASHSIZE,dim_hashtab);
|
|
|
|
strcpy(h5dimpath_name,HDF4_DIMG);
|
|
|
|
/* checking whether sds dimension scale name contains ORI_SLASH, changing into CHA_SLASH.*/
|
|
|
|
cor_sdsdimname = correct_name(sdsdim_name);
|
|
if(cor_sdsdimname == NULL) {
|
|
printf("error in generating corrected sds dimensional scale name.\n");
|
|
SDendaccess(sdsdim_id);
|
|
return FAIL;
|
|
}
|
|
|
|
h5sdsdim_name = get_obj_aboname(cor_sdsdimname,NULL,h5dimpath_name,NULL);
|
|
if (h5sdsdim_name == NULL) {
|
|
printf("error in getting hdf5 sds dimension name.\n");
|
|
SDendaccess(sdsdim_id);
|
|
free(cor_sdsdimname);
|
|
return FAIL;
|
|
}
|
|
free(cor_sdsdimname);
|
|
strcpy(&h5sdsdim_allname[k*MAX_NC_NAME],h5sdsdim_name);
|
|
|
|
/*if it is not touched, get name of the dimensional scale data. */
|
|
if (check_sdsdim == 1){/* the dimension is touched. */
|
|
free(h5sdsdim_name);
|
|
SDendaccess(sdsdim_id);
|
|
j = j + 1;
|
|
k = k + 1;
|
|
continue;
|
|
}
|
|
|
|
if (check_sdsdim != 0) {
|
|
printf("error in checking sds dimensions.\n");
|
|
SDendaccess(sdsdim_id);
|
|
free(h5sdsdim_name);
|
|
return FAIL;
|
|
}
|
|
|
|
/* if this sds has no dimensional scale data. skip it.*/
|
|
if(sdsdim_type == 0) {
|
|
k = k + 1;
|
|
|
|
continue;
|
|
}
|
|
if(h4type_to_h5type(sdsdim_type,&h5dim_memtype,&h4dim_memsize,
|
|
&h4dim_size,&h5dim_tid)== FAIL) {
|
|
printf("error in transferring sds dimension data type.\n");
|
|
SDendaccess(sdsdim_id);
|
|
free(h5sdsdim_name);
|
|
return FAIL;
|
|
}
|
|
|
|
/* dimensional scale dataset cannot be H5T_STRING data type.
|
|
So transferring back to int8 */
|
|
|
|
if (h5dim_tid == H5T_STRING) {
|
|
if(h5string_to_int(sdsdim_type,&h5dim_memtype,h4dim_memsize,
|
|
&h5dim_tid)==FAIL){
|
|
printf("error in translating from string to int. \n");
|
|
SDendaccess(sdsdim_id);
|
|
free(h5sdsdim_name);
|
|
return FAIL;
|
|
}
|
|
}
|
|
|
|
dim_scadata = malloc(h4dim_memsize*sds_dimscasize[0]);
|
|
istat = SDgetdimscale(sdsdim_id,(VOIDP)dim_scadata);
|
|
|
|
if (istat == FAIL) {
|
|
printf("sds get dim. scale failed. \n");
|
|
SDendaccess(sdsdim_id);
|
|
free(h5sdsdim_name);
|
|
free(dim_scadata);
|
|
return FAIL;
|
|
}
|
|
|
|
h5dimscas[0] = sds_dimscasize[0];
|
|
h5dim_sid = H5Screate_simple(1,h5dimscas,NULL);
|
|
|
|
if(h5dim_sid <0) {
|
|
printf("error in creating space. \n");
|
|
SDendaccess(sdsdim_id);
|
|
free(h5sdsdim_name);
|
|
free(dim_scadata);
|
|
return FAIL;
|
|
}
|
|
|
|
/* create h5 dataset under group HDF4_DIMG*/
|
|
h5dim_dset = H5Dcreate(sh5_dimgroup,h5sdsdim_name,h5dim_tid,
|
|
h5dim_sid,H5P_DEFAULT);
|
|
|
|
if(h5dim_dset <0) {
|
|
printf("error in creating dataset. \n");
|
|
free(h5sdsdim_name);
|
|
free(dim_scadata);
|
|
SDendaccess(sdsdim_id);
|
|
H5Sclose(h5dim_sid);
|
|
return FAIL;
|
|
}
|
|
|
|
if (H5Dwrite(h5dim_dset,h5dim_memtype,h5dim_sid,h5dim_sid,
|
|
H5P_DEFAULT,(void *)dim_scadata)<0) {
|
|
printf("error writing data\n");
|
|
free(h5sdsdim_name);
|
|
free(dim_scadata);
|
|
SDendaccess(sdsdim_id);
|
|
H5Sclose(h5dim_sid);
|
|
H5Dclose(h5dim_dset);
|
|
return FAIL;
|
|
}
|
|
|
|
check_gloattr = 0;
|
|
if(sds_transattrs(sdsdim_id,h5dim_dset,num_sdsdimattrs,check_gloattr)
|
|
== FAIL){
|
|
printf("error in transferring attributes. \n");
|
|
free(h5sdsdim_name);
|
|
free(dim_scadata);
|
|
SDendaccess(sdsdim_id);
|
|
H5Sclose(h5dim_sid);
|
|
H5Dclose(h5dim_dset);
|
|
return FAIL;
|
|
}
|
|
SDendaccess(sdsdim_id);
|
|
free(dim_scadata);
|
|
free(h5sdsdim_name);
|
|
ret = H5Sclose(h5dim_sid);
|
|
ret = H5Dclose(h5dim_dset);
|
|
j = j + 1;
|
|
k = k + 1;
|
|
}
|
|
|
|
/*1. create object reference number to dimensional scale dataset.
|
|
2. store absolute name of dimensional name into
|
|
dimensional list. */
|
|
|
|
if ( j != 0) {
|
|
|
|
h5dim_dims[0] = j;
|
|
attr_refDims[0] = j;
|
|
attr_refSpace = H5Screate_simple(1,attr_refDims,NULL);
|
|
attr_refType = H5Tcopy(H5T_STD_REF_OBJ);
|
|
alldim_refdat = calloc(j,sizeof(hobj_ref_t));
|
|
|
|
if(alldim_refdat == NULL) {
|
|
printf("error in allocating memory. \n");
|
|
H5Sclose(attr_refSpace);
|
|
H5Tclose(attr_refType);
|
|
return FAIL;
|
|
}
|
|
|
|
for(i=0;i<j;i++){
|
|
bzero(h5newsdsdim_name,MAX_NC_NAME);
|
|
strcpy(h5newsdsdim_name,&h5sdsdim_allname[i*MAX_NC_NAME]);
|
|
ret = H5Rcreate(&dim_refdat,sh5_dimgroup,h5newsdsdim_name,
|
|
H5R_OBJECT,-1);
|
|
if(ret <0) {
|
|
free(alldim_refdat);
|
|
H5Sclose(attr_refSpace);
|
|
H5Tclose(attr_refType);
|
|
printf("error in generating H5 reference. \n");
|
|
return FAIL;
|
|
}
|
|
alldim_refdat[i] = dim_refdat;
|
|
}
|
|
|
|
attribID = H5Acreate(sh5dset,DIMSCALE,attr_refType,attr_refSpace,
|
|
H5P_DEFAULT);
|
|
if(attribID < 0) {
|
|
free(alldim_refdat);
|
|
H5Sclose(attr_refSpace);
|
|
H5Tclose(attr_refType);
|
|
H5Aclose(attribID);
|
|
printf("error in generating H5 attribute ID. \n");
|
|
return FAIL;
|
|
}
|
|
ret = H5Awrite(attribID,attr_refType,(void *)alldim_refdat);
|
|
H5Sclose(attr_refSpace);
|
|
H5Tclose(attr_refType);
|
|
H5Aclose(attribID);
|
|
free(alldim_refdat);
|
|
}
|
|
|
|
if(k!=0) {
|
|
h5dim_namesid = H5Screate_simple(1,h5dim_dims,NULL);
|
|
|
|
if(h5dim_namesid <0) {
|
|
printf("error in creating sds dimensionlist space.\n");
|
|
return FAIL;
|
|
}
|
|
|
|
h5str_dimntype = mkstr(MAX_NC_NAME,H5T_STR_NULLTERM);
|
|
if(h5str_dimntype < 0) {
|
|
H5Sclose(h5dim_namesid);
|
|
printf("error in generating H5T_STRING type.\n");
|
|
return FAIL;
|
|
}
|
|
|
|
h5dim_nameaid = H5Acreate(sh5dset,HDF4_DIMENSION_LIST,h5str_dimntype,
|
|
h5dim_namesid,H5P_DEFAULT);
|
|
|
|
if(h5dim_nameaid <0) {
|
|
H5Sclose(h5dim_namesid);
|
|
printf("error in creating sds dimensionlist id.\n");
|
|
return FAIL;
|
|
}
|
|
|
|
ret = H5Awrite(h5dim_nameaid,h5str_dimntype,h5sdsdim_allname);
|
|
|
|
if(ret < 0) {
|
|
H5Sclose(h5dim_namesid);
|
|
H5Aclose(h5dim_nameaid);
|
|
printf("error in writing sds dimensionlist. \n");
|
|
return FAIL;
|
|
}
|
|
|
|
ret = H5Sclose(h5dim_namesid);
|
|
ret = H5Aclose(h5dim_nameaid);
|
|
|
|
}
|
|
return SUCCEED;
|
|
}
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|