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hdf5/test/th5s.c
Quincey Koziol 987f5d5e4d [svn-r8048] Purpose: 
Code cleanup & reorganization

Description:
    Move further in the testing framework cleanup, eliminating all the
global variables (moving them into testframe.c as static variables) from the
testing framework code and moving it into the libh5test.a.

Platforms tested:
    FreeBSD 4.9 (sleipnir) w & w/o thread-safety, c++ & parallel
    h5committested
2004-01-09 20:41:13 -05:00

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/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by the Board of Trustees of the University of Illinois. *
* All rights reserved. *
* *
* This file is part of HDF5. The full HDF5 copyright notice, including *
* terms governing use, modification, and redistribution, is contained in *
* the files COPYING and Copyright.html. COPYING can be found at the root *
* of the source code distribution tree; Copyright.html can be found at the *
* root level of an installed copy of the electronic HDF5 document set and *
* is linked from the top-level documents page. It can also be found at *
* http://hdf.ncsa.uiuc.edu/HDF5/doc/Copyright.html. If you do not have *
* access to either file, you may request a copy from hdfhelp@ncsa.uiuc.edu. *
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
/***********************************************************
*
* Test program: th5s
*
* Test the dataspace functionality
*
*************************************************************/
#include "testhdf5.h"
#include "H5private.h"
#include "H5Bprivate.h"
#include "H5Sprivate.h"
#include "H5Pprivate.h"
#define TESTFILE "th5s.h5"
#define DATAFILE "th5s1.h5"
/* 3-D dataset with fixed dimensions */
#define SPACE1_NAME "Space1"
#define SPACE1_RANK 3
#define SPACE1_DIM1 3
#define SPACE1_DIM2 15
#define SPACE1_DIM3 13
/* 4-D dataset with one unlimited dimension */
#define SPACE2_NAME "Space2"
#define SPACE2_RANK 4
#define SPACE2_DIM1 0
#define SPACE2_DIM2 15
#define SPACE2_DIM3 13
#define SPACE2_DIM4 23
#define SPACE2_MAX1 H5S_UNLIMITED
#define SPACE2_MAX2 15
#define SPACE2_MAX3 13
#define SPACE2_MAX4 23
/* Scalar dataset with simple datatype */
#define SPACE3_NAME "Scalar1"
#define SPACE3_RANK 0
unsigned space3_data=65;
/* Scalar dataset with compound datatype */
#define SPACE4_NAME "Scalar2"
#define SPACE4_RANK 0
#define SPACE4_FIELDNAME1 "c1"
#define SPACE4_FIELDNAME2 "u"
#define SPACE4_FIELDNAME3 "f"
#define SPACE4_FIELDNAME4 "c2"
size_t space4_field1_off=0;
size_t space4_field2_off=0;
size_t space4_field3_off=0;
size_t space4_field4_off=0;
struct space4_struct {
char c1;
unsigned u;
float f;
char c2;
} space4_data={'v',987123,(float)-3.14,'g'}; /* Test data for 4th dataspace */
/****************************************************************
**
** test_h5s_basic(): Test basic H5S (dataspace) code.
**
****************************************************************/
static void
test_h5s_basic(void)
{
hid_t fid1; /* HDF5 File IDs */
hid_t sid1, sid2; /* Dataspace ID */
hid_t dset1; /* Dataset ID */
int rank; /* Logical rank of dataspace */
hsize_t dims1[] = {SPACE1_DIM1, SPACE1_DIM2, SPACE1_DIM3};
hsize_t dims2[] = {SPACE2_DIM1, SPACE2_DIM2, SPACE2_DIM3,
SPACE2_DIM4};
hsize_t dims3[H5S_MAX_RANK+1];
hsize_t max2[] = {SPACE2_MAX1, SPACE2_MAX2, SPACE2_MAX3,
SPACE2_MAX4};
hsize_t tdims[4]; /* Dimension array to test with */
hsize_t tmax[4];
hssize_t n; /* Number of dataspace elements */
herr_t ret; /* Generic return value */
/* Output message about test being performed */
MESSAGE(5, ("Testing Dataspace Manipulation\n"));
sid1 = H5Screate_simple(SPACE1_RANK, dims1, NULL);
CHECK(sid1, FAIL, "H5Screate_simple");
n = H5Sget_simple_extent_npoints(sid1);
CHECK(n, FAIL, "H5Sget_simple_extent_npoints");
VERIFY(n, SPACE1_DIM1 * SPACE1_DIM2 * SPACE1_DIM3,
"H5Sget_simple_extent_npoints");
rank = H5Sget_simple_extent_ndims(sid1);
CHECK(rank, FAIL, "H5Sget_simple_extent_ndims");
VERIFY(rank, SPACE1_RANK, "H5Sget_simple_extent_ndims");
rank = H5Sget_simple_extent_dims(sid1, tdims, NULL);
CHECK(rank, FAIL, "H5Sget_simple_extent_dims");
VERIFY(HDmemcmp(tdims, dims1, SPACE1_RANK * sizeof(unsigned)), 0,
"H5Sget_simple_extent_dims");
sid2 = H5Screate_simple(SPACE2_RANK, dims2, max2);
CHECK(sid2, FAIL, "H5Screate_simple");
n = H5Sget_simple_extent_npoints(sid2);
CHECK(n, FAIL, "H5Sget_simple_extent_npoints");
VERIFY(n, SPACE2_DIM1 * SPACE2_DIM2 * SPACE2_DIM3 * SPACE2_DIM4,
"H5Sget_simple_extent_npoints");
rank = H5Sget_simple_extent_ndims(sid2);
CHECK(rank, FAIL, "H5Sget_simple_extent_ndims");
VERIFY(rank, SPACE2_RANK, "H5Sget_simple_extent_ndims");
rank = H5Sget_simple_extent_dims(sid2, tdims, tmax);
CHECK(rank, FAIL, "H5Sget_simple_extent_dims");
VERIFY(HDmemcmp(tdims, dims2, SPACE2_RANK * sizeof(unsigned)), 0,
"H5Sget_simple_extent_dims");
VERIFY(HDmemcmp(tmax, max2, SPACE2_RANK * sizeof(unsigned)), 0,
"H5Sget_simple_extent_dims");
ret = H5Sclose(sid1);
CHECK(ret, FAIL, "H5Sclose");
ret = H5Sclose(sid2);
CHECK(ret, FAIL, "H5Sclose");
/*
* Check to be sure we can't create a simple data space that has too many
* dimensions.
*/
H5E_BEGIN_TRY {
sid1 = H5Screate_simple(H5S_MAX_RANK+1, dims3, NULL);
} H5E_END_TRY;
VERIFY(sid1, FAIL, "H5Screate_simple");
/*
* Try reading a file that has been prepared that has a dataset with a
* higher dimensionality than what the library can handle.
*
* If this test fails and the H5S_MAX_RANK variable has changed, follow
* the instructions in space_overflow.c for regenerating the th5s.h5 file.
*/
{
char testfile[512]="";
char *srcdir = HDgetenv("srcdir");
if (srcdir && ((HDstrlen(srcdir) + HDstrlen(TESTFILE) + 1) < sizeof(testfile))){
HDstrcpy(testfile, srcdir);
HDstrcat(testfile, "/");
}
HDstrcat(testfile, TESTFILE);
fid1 = H5Fopen(testfile, H5F_ACC_RDONLY, H5P_DEFAULT);
CHECK_I(fid1, "H5Fopen");
if (fid1 >= 0){
dset1 = H5Dopen(fid1, "dset");
VERIFY(dset1, FAIL, "H5Dopen");
ret = H5Fclose(fid1);
CHECK_I(ret, "H5Fclose");
}
else
printf("***cannot open the pre-created H5S_MAX_RANK test file (%s)\n",
testfile);
}
/* Verify that incorrect dimensions don't work */
dims1[0]=0;
sid1 = H5Screate_simple(SPACE1_RANK, dims1, NULL);
VERIFY(sid1, FAIL, "H5Screate_simple");
sid1 = H5Screate(H5S_SIMPLE);
CHECK(sid1, FAIL, "H5Screate");
ret = H5Sset_extent_simple(sid1,SPACE1_RANK,dims1,NULL);
VERIFY(ret, FAIL, "H5Sset_extent_simple");
ret = H5Sclose(sid1);
CHECK_I(ret, "H5Sclose");
} /* test_h5s_basic() */
/****************************************************************
**
** test_h5s_scalar_write(): Test scalar H5S (dataspace) writing code.
**
****************************************************************/
static void
test_h5s_scalar_write(void)
{
hid_t fid1; /* HDF5 File IDs */
hid_t dataset; /* Dataset ID */
hid_t sid1; /* Dataspace ID */
int rank; /* Logical rank of dataspace */
hsize_t tdims[4]; /* Dimension array to test with */
hssize_t n; /* Number of dataspace elements */
H5S_class_t ext_type; /* Extent type */
herr_t ret; /* Generic return value */
/* Output message about test being performed */
MESSAGE(5, ("Testing Scalar Dataspace Manipulation during Writing\n"));
/* Create file */
fid1 = H5Fcreate(DATAFILE, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
CHECK(fid1, FAIL, "H5Fcreate");
/* Create scalar dataspace */
sid1 = H5Screate_simple(SPACE3_RANK, NULL, NULL);
CHECK(sid1, FAIL, "H5Screate_simple");
n = H5Sget_simple_extent_npoints(sid1);
CHECK(n, FAIL, "H5Sget_simple_extent_npoints");
VERIFY(n, 1, "H5Sget_simple_extent_npoints");
rank = H5Sget_simple_extent_ndims(sid1);
CHECK(rank, FAIL, "H5Sget_simple_extent_ndims");
VERIFY(rank, SPACE3_RANK, "H5Sget_simple_extent_ndims");
rank = H5Sget_simple_extent_dims(sid1, tdims, NULL);
VERIFY(rank, 0, "H5Sget_simple_extent_dims");
/* Verify extent type */
ext_type = H5Sget_simple_extent_type(sid1);
VERIFY(ext_type, H5S_SCALAR, "H5Sget_simple_extent_type");
/* Create a dataset */
dataset=H5Dcreate(fid1,"Dataset1",H5T_NATIVE_UINT,sid1,H5P_DEFAULT);
CHECK(dataset, FAIL, "H5Dcreate");
ret = H5Dwrite(dataset, H5T_NATIVE_UINT, H5S_ALL, H5S_ALL, H5P_DEFAULT, &space3_data);
CHECK(ret, FAIL, "H5Dwrite");
/* Close Dataset */
ret = H5Dclose(dataset);
CHECK(ret, FAIL, "H5Dclose");
/* Close scalar dataspace */
ret = H5Sclose(sid1);
CHECK(ret, FAIL, "H5Sclose");
/* Close file */
ret = H5Fclose(fid1);
CHECK(ret, FAIL, "H5Fclose");
} /* test_h5s_scalar_write() */
/****************************************************************
**
** test_h5s_scalar_read(): Test scalar H5S (dataspace) reading code.
**
****************************************************************/
static void
test_h5s_scalar_read(void)
{
hid_t fid1; /* HDF5 File IDs */
hid_t dataset; /* Dataset ID */
hid_t sid1; /* Dataspace ID */
int rank; /* Logical rank of dataspace */
hsize_t tdims[4]; /* Dimension array to test with */
hssize_t n; /* Number of dataspace elements */
unsigned rdata; /* Scalar data read in */
herr_t ret; /* Generic return value */
H5S_class_t ext_type; /* Extent type */
/* Output message about test being performed */
MESSAGE(5, ("Testing Scalar Dataspace Manipulation during Reading\n"));
/* Create file */
fid1 = H5Fopen(DATAFILE, H5F_ACC_RDWR, H5P_DEFAULT);
CHECK(fid1, FAIL, "H5Fopen");
/* Create a dataset */
dataset=H5Dopen(fid1,"Dataset1");
CHECK(dataset, FAIL, "H5Dopen");
sid1=H5Dget_space(dataset);
CHECK(sid1, FAIL, "H5Dget_space");
n = H5Sget_simple_extent_npoints(sid1);
CHECK(n, FAIL, "H5Sget_simple_extent_npoints");
VERIFY(n, 1, "H5Sget_simple_extent_npoints");
rank = H5Sget_simple_extent_ndims(sid1);
CHECK(rank, FAIL, "H5Sget_simple_extent_ndims");
VERIFY(rank, SPACE3_RANK, "H5Sget_simple_extent_ndims");
rank = H5Sget_simple_extent_dims(sid1, tdims, NULL);
VERIFY(rank, 0, "H5Sget_simple_extent_dims");
/* Verify extent type */
ext_type = H5Sget_simple_extent_type(sid1);
VERIFY(ext_type, H5S_SCALAR, "H5Sget_simple_extent_type");
ret = H5Dread(dataset, H5T_NATIVE_UINT, H5S_ALL, H5S_ALL, H5P_DEFAULT, &rdata);
CHECK(ret, FAIL, "H5Dread");
VERIFY(rdata, space3_data, "H5Dread");
/* Close Dataset */
ret = H5Dclose(dataset);
CHECK(ret, FAIL, "H5Dclose");
/* Close scalar dataspace */
ret = H5Sclose(sid1);
CHECK(ret, FAIL, "H5Sclose");
/* Close file */
ret = H5Fclose(fid1);
CHECK(ret, FAIL, "H5Fclose");
} /* test_h5s_scalar_read() */
/****************************************************************
**
** test_h5s_compound_scalar_write(): Test scalar H5S (dataspace) writing for
** compound datatypes.
**
****************************************************************/
static void
test_h5s_compound_scalar_write(void)
{
hid_t fid1; /* HDF5 File IDs */
hid_t dataset; /* Dataset ID */
hid_t tid1; /* Attribute datatype ID */
hid_t sid1; /* Dataspace ID */
int rank; /* Logical rank of dataspace */
hsize_t tdims[4]; /* Dimension array to test with */
hssize_t n; /* Number of dataspace elements */
herr_t ret; /* Generic return value */
/* Output message about test being performed */
MESSAGE(5, ("Testing Scalar Dataspace Manipulation for Writing Compound Datatypes\n"));
/* Create file */
fid1 = H5Fcreate(DATAFILE, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
CHECK(fid1, FAIL, "H5Fcreate");
/* Create the compound datatype. */
tid1 = H5Tcreate (H5T_COMPOUND, sizeof(struct space4_struct));
CHECK(tid1, FAIL, "H5Tcreate");
space4_field1_off=HOFFSET(struct space4_struct, c1);
ret = H5Tinsert(tid1, SPACE4_FIELDNAME1, space4_field1_off,
H5T_NATIVE_SCHAR);
CHECK(ret, FAIL, "H5Tinsert");
space4_field2_off=HOFFSET(struct space4_struct, u);
ret = H5Tinsert(tid1, SPACE4_FIELDNAME2, space4_field2_off,
H5T_NATIVE_UINT);
CHECK(ret, FAIL, "H5Tinsert");
space4_field3_off=HOFFSET(struct space4_struct, f);
ret = H5Tinsert(tid1, SPACE4_FIELDNAME3, space4_field3_off,
H5T_NATIVE_FLOAT);
CHECK(ret, FAIL, "H5Tinsert");
space4_field4_off=HOFFSET(struct space4_struct, c2);
ret = H5Tinsert(tid1, SPACE4_FIELDNAME4, space4_field4_off,
H5T_NATIVE_SCHAR);
CHECK(ret, FAIL, "H5Tinsert");
/* Create scalar dataspace */
sid1 = H5Screate_simple(SPACE3_RANK, NULL, NULL);
CHECK(sid1, FAIL, "H5Screate_simple");
n = H5Sget_simple_extent_npoints(sid1);
CHECK(n, FAIL, "H5Sget_simple_extent_npoints");
VERIFY(n, 1, "H5Sget_simple_extent_npoints");
rank = H5Sget_simple_extent_ndims(sid1);
CHECK(rank, FAIL, "H5Sget_simple_extent_ndims");
VERIFY(rank, SPACE3_RANK, "H5Sget_simple_extent_ndims");
rank = H5Sget_simple_extent_dims(sid1, tdims, NULL);
VERIFY(rank, 0, "H5Sget_simple_extent_dims");
/* Create a dataset */
dataset=H5Dcreate(fid1,"Dataset1",tid1,sid1,H5P_DEFAULT);
CHECK(dataset, FAIL, "H5Dcreate");
ret = H5Dwrite(dataset, tid1, H5S_ALL, H5S_ALL, H5P_DEFAULT, &space4_data);
CHECK(ret, FAIL, "H5Dwrite");
/* Close Dataset */
ret = H5Dclose(dataset);
CHECK(ret, FAIL, "H5Dclose");
/* Close scalar dataspace */
ret = H5Sclose(sid1);
CHECK(ret, FAIL, "H5Sclose");
/* Close file */
ret = H5Fclose(fid1);
CHECK(ret, FAIL, "H5Fclose");
} /* test_h5s_compound_scalar_write() */
/****************************************************************
**
** test_h5s_compound_scalar_read(): Test scalar H5S (dataspace) reading for
** compound datatypes.
**
****************************************************************/
static void
test_h5s_compound_scalar_read(void)
{
hid_t fid1; /* HDF5 File IDs */
hid_t dataset; /* Dataset ID */
hid_t sid1; /* Dataspace ID */
hid_t type; /* Datatype */
int rank; /* Logical rank of dataspace */
hsize_t tdims[4]; /* Dimension array to test with */
hssize_t n; /* Number of dataspace elements */
struct space4_struct rdata; /* Scalar data read in */
herr_t ret; /* Generic return value */
/* Output message about test being performed */
MESSAGE(5, ("Testing Scalar Dataspace Manipulation for Reading Compound Datatypes\n"));
/* Create file */
fid1 = H5Fopen(DATAFILE, H5F_ACC_RDWR, H5P_DEFAULT);
CHECK(fid1, FAIL, "H5Fopen");
/* Create a dataset */
dataset=H5Dopen(fid1,"Dataset1");
CHECK(dataset, FAIL, "H5Dopen");
sid1=H5Dget_space(dataset);
CHECK(sid1, FAIL, "H5Dget_space");
n = H5Sget_simple_extent_npoints(sid1);
CHECK(n, FAIL, "H5Sget_simple_extent_npoints");
VERIFY(n, 1, "H5Sget_simple_extent_npoints");
rank = H5Sget_simple_extent_ndims(sid1);
CHECK(rank, FAIL, "H5Sget_simple_extent_ndims");
VERIFY(rank, SPACE3_RANK, "H5Sget_simple_extent_ndims");
rank = H5Sget_simple_extent_dims(sid1, tdims, NULL);
VERIFY(rank, 0, "H5Sget_simple_extent_dims");
type=H5Dget_type(dataset);
CHECK(type, FAIL, "H5Dget_type");
ret = H5Dread(dataset, type, H5S_ALL, H5S_ALL, H5P_DEFAULT, &rdata);
CHECK(ret, FAIL, "H5Dread");
if(HDmemcmp(&space4_data,&rdata,sizeof(struct space4_struct))) {
printf("scalar data different: space4_data.c1=%c, read_data4.c1=%c\n",space4_data.c1,rdata.c1);
printf("scalar data different: space4_data.u=%u, read_data4.u=%u\n",space4_data.u,rdata.u);
printf("scalar data different: space4_data.f=%f, read_data4.f=%f\n",space4_data.f,rdata.f);
TestErrPrintf("scalar data different: space4_data.c1=%c, read_data4.c1=%c\n",space4_data.c1,rdata.c2);
} /* end if */
/* Close Dataset */
ret = H5Dclose(dataset);
CHECK(ret, FAIL, "H5Dclose");
/* Close scalar dataspace */
ret = H5Sclose(sid1);
CHECK(ret, FAIL, "H5Sclose");
/* Close file */
ret = H5Fclose(fid1);
CHECK(ret, FAIL, "H5Fclose");
} /* test_h5s_compound_scalar_read() */
/* Data arrays for chunk test */
double chunk_data_dbl[50000][3];
float chunk_data_flt[50000][3];
/****************************************************************
**
** test_h5s_chunk(): Exercise chunked I/O, testing when data conversion
** is necessary and the entire chunk read in doesn't fit into the
** conversion buffer
**
****************************************************************/
static void
test_h5s_chunk(void)
{
herr_t status;
hid_t fileID, dsetID;
hid_t plist_id;
hid_t space_id;
hsize_t dims[2];
hsize_t csize[2];
int i,j;
fileID = H5Fcreate(DATAFILE,H5F_ACC_TRUNC,H5P_DEFAULT,H5P_DEFAULT);
CHECK(fileID, FAIL, "H5Fcreate");
plist_id = H5Pcreate(H5P_DATASET_CREATE);
CHECK(plist_id, FAIL, "H5Pcreate");
csize[0] = 50000;
csize[1] = 3;
status = H5Pset_chunk(plist_id, 2, csize);
CHECK(status, FAIL, "H5Pset_chunk");
/* Create the data space */
dims[0] = 50000;
dims[1] = 3;
space_id = H5Screate_simple(2, dims, NULL);
CHECK(space_id, FAIL, "H5Screate_simple");
dsetID = H5Dcreate(fileID,"coords",H5T_NATIVE_FLOAT,space_id,plist_id);
CHECK(dsetID, FAIL, "H5Dcreate");
/* Initialize float array */
for(i=0; i<50000; i++)
for(j=0; j<3; j++)
chunk_data_flt[i][j]=(float)(i*2.5-j*100.3);
status= H5Dwrite(dsetID,H5T_NATIVE_FLOAT,H5S_ALL,H5S_ALL,H5P_DEFAULT,chunk_data_flt);
CHECK(status, FAIL, "H5Dwrite");
status=H5Pclose(plist_id);
CHECK(status, FAIL, "H5Pclose");
status=H5Sclose(space_id);
CHECK(status, FAIL, "H5Sclose");
status=H5Dclose(dsetID);
CHECK(status, FAIL, "H5Dclose");
status=H5Fclose(fileID);
CHECK(status, FAIL, "H5Fclose");
/* Reset/initialize the data arrays to read in */
HDmemset(chunk_data_dbl,0,sizeof(double)*50000*3);
HDmemset(chunk_data_flt,0,sizeof(float)*50000*3);
fileID = H5Fopen(DATAFILE,H5F_ACC_RDONLY,H5P_DEFAULT);
CHECK(fileID, FAIL, "H5Fopen");
dsetID = H5Dopen(fileID,"coords");
CHECK(dsetID, FAIL, "H5Dopen");
status= H5Dread (dsetID,H5T_NATIVE_DOUBLE,H5S_ALL,H5S_ALL,H5P_DEFAULT,chunk_data_dbl);
CHECK(status, FAIL, "H5Dread");
status= H5Dread (dsetID,H5T_NATIVE_FLOAT,H5S_ALL,H5S_ALL,H5P_DEFAULT,chunk_data_flt);
CHECK(status, FAIL, "H5Dread");
status=H5Dclose(dsetID);
CHECK(status, FAIL, "H5Dclose");
status=H5Fclose(fileID);
CHECK(status, FAIL, "H5Fclose");
for(i=0; i<50000; i++) {
for(j=0; j<3; j++) {
if(chunk_data_dbl[i][j]!=chunk_data_flt[i][j])
TestErrPrintf("chunk_data_dbl[%d][%d]=%f, chunk_data_flt[%d][%d]=%f\n",i,j,chunk_data_dbl[i][j],i,j,chunk_data_flt[i][j]);
} /* end for */
} /* end for */
} /* test_h5s_chunk() */
/****************************************************************
**
** test_h5s(): Main H5S (dataspace) testing routine.
**
****************************************************************/
void
test_h5s(void)
{
/* Output message about test being performed */
MESSAGE(5, ("Testing Dataspaces\n"));
test_h5s_basic(); /* Test basic H5S code */
test_h5s_scalar_write(); /* Test scalar H5S writing code */
test_h5s_scalar_read(); /* Test scalar H5S reading code */
test_h5s_compound_scalar_write(); /* Test compound datatype scalar H5S writing code */
test_h5s_compound_scalar_read(); /* Test compound datatype scalar H5S reading code */
/* This test was added later to exercise a bug in chunked I/O */
test_h5s_chunk(); /* Exercise bug fix for chunked I/O */
} /* test_h5s() */
/*-------------------------------------------------------------------------
* Function: cleanup_h5s
*
* Purpose: Cleanup temporary test files
*
* Return: none
*
* Programmer: Albert Cheng
* July 2, 1998
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
void
cleanup_h5s(void)
{
remove(DATAFILE);
}
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