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hdf5/tools/h5repack/CMakeLists.txt
Jonathan Kim 75e9bf9e2c [svn-r21902] Description: 
update a comment from buzilla# (1797) to jira# (2605). Also prevent conflict from merging source.
2012-01-30 13:35:54 -05:00

830 lines
33 KiB
CMake
Raw Blame History

cmake_minimum_required (VERSION 2.8.6)
PROJECT (HDF5_TOOLS_H5REPACK)
#-----------------------------------------------------------------------------
# Setup include Directories
#-----------------------------------------------------------------------------
INCLUDE_DIRECTORIES (${HDF5_TOOLS_SRC_DIR}/lib)
INCLUDE_DIRECTORIES (${HDF5_TEST_SRC_DIR})
# --------------------------------------------------------------------
# Add h5Repack executables
# --------------------------------------------------------------------
SET (REPACK_COMMON_SRCS
${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/h5repack_copy.c
${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/h5repack_filters.c
${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/h5repack_opttable.c
${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/h5repack_parse.c
${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/h5repack_refs.c
${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/h5repack_verify.c
${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/h5repack.c
)
ADD_EXECUTABLE (h5repack ${REPACK_COMMON_SRCS} ${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/h5repack_main.c)
TARGET_NAMING (h5repack ${LIB_TYPE})
TARGET_LINK_LIBRARIES (h5repack ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET})
SET_TARGET_PROPERTIES (h5repack PROPERTIES FOLDER tools)
SET (H5_DEP_EXECUTABLES h5repack)
##############################################################################
##############################################################################
### T E S T I N G ###
##############################################################################
##############################################################################
IF (BUILD_TESTING)
# --------------------------------------------------------------------
# Add h5Repack test executables
# --------------------------------------------------------------------
ADD_EXECUTABLE (testh5repack_detect_szip ${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/testh5repack_detect_szip.c)
TARGET_NAMING (testh5repack_detect_szip ${LIB_TYPE})
TARGET_LINK_LIBRARIES (testh5repack_detect_szip ${HDF5_LIB_TARGET} ${HDF5_TOOLS_LIB_TARGET} ${HDF5_TEST_LIB_TARGET})
SET_TARGET_PROPERTIES (testh5repack_detect_szip PROPERTIES FOLDER tools)
ADD_EXECUTABLE (h5repacktest ${REPACK_COMMON_SRCS} ${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/h5repacktst.c)
TARGET_NAMING (h5repacktest ${LIB_TYPE})
TARGET_LINK_LIBRARIES (h5repacktest ${HDF5_TOOLS_LIB_TARGET} ${HDF5_TEST_LIB_TARGET})
SET_TARGET_PROPERTIES (h5repacktest PROPERTIES FOLDER tools)
IF (HDF5_TEST_VFD)
SET (VFD_LIST
sec2
stdio
core
split
multi
family
)
IF (DIRECT_VFD)
SET (VFD_LIST ${VFD_LIST} direct)
ENDIF (DIRECT_VFD)
MACRO (ADD_VFD_TEST vfdname resultcode)
ADD_TEST (
NAME H5REPACK-VFD-${vfdname}-h5repacktest
COMMAND "${CMAKE_COMMAND}"
-D "TEST_PROGRAM=$<TARGET_FILE:h5repacktest>"
-D "TEST_ARGS:STRING="
-D "TEST_VFD:STRING=${vfdname}"
-D "TEST_EXPECT=${resultcode}"
-D "TEST_OUTPUT=h5repacktest"
-D "TEST_FOLDER=${PROJECT_BINARY_DIR}"
-P "${HDF5_RESOURCES_DIR}/vfdTest.cmake"
)
IF (NOT "${last_test}" STREQUAL "")
SET_TESTS_PROPERTIES (H5REPACK-VFD-${vfdname}-h5repacktest PROPERTIES DEPENDS ${last_test})
ENDIF (NOT "${last_test}" STREQUAL "")
SET (last_test "H5REPACK-VFD-${vfdname}-h5repacktest")
ENDMACRO (ADD_VFD_TEST)
ENDIF (HDF5_TEST_VFD)
# --------------------------------------------------------------------
# Copy all the HDF5 files from the source directory into the test directory
# --------------------------------------------------------------------
SET (LIST_HDF5_TEST_FILES
${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/testfiles/h5repack_attr.h5
${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/testfiles/h5repack_attr_refs.h5
${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/testfiles/h5repack_deflate.h5
${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/testfiles/h5repack_early.h5
${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/testfiles/h5repack_ext.h5
${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/testfiles/h5repack_fill.h5
${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/testfiles/h5repack_filters.h5
${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/testfiles/h5repack_fletcher.h5
${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/testfiles/h5repack_hlink.h5
${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/testfiles/h5repack_layout.h5
${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/testfiles/h5repack_layouto.h5
${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/testfiles/h5repack_layout2.h5
${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/testfiles/h5repack_named_dtypes.h5
${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/testfiles/h5repack_nbit.h5
${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/testfiles/h5repack_objs.h5
${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/testfiles/h5repack_refs.h5
${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/testfiles/h5repack_shuffle.h5
${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/testfiles/h5repack_soffset.h5
${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/testfiles/h5repack_szip.h5
# h5diff/testfile
${HDF5_TOOLS_H5DIFF_SOURCE_DIR}/testfiles/h5diff_attr1.h5
# tools/testfiles
${HDF5_TOOLS_SRC_DIR}/testfiles/tfamily00000.h5
${HDF5_TOOLS_SRC_DIR}/testfiles/tfamily00001.h5
${HDF5_TOOLS_SRC_DIR}/testfiles/tfamily00002.h5
${HDF5_TOOLS_SRC_DIR}/testfiles/tfamily00003.h5
${HDF5_TOOLS_SRC_DIR}/testfiles/tfamily00004.h5
${HDF5_TOOLS_SRC_DIR}/testfiles/tfamily00005.h5
${HDF5_TOOLS_SRC_DIR}/testfiles/tfamily00006.h5
${HDF5_TOOLS_SRC_DIR}/testfiles/tfamily00007.h5
${HDF5_TOOLS_SRC_DIR}/testfiles/tfamily00008.h5
${HDF5_TOOLS_SRC_DIR}/testfiles/tfamily00009.h5
${HDF5_TOOLS_SRC_DIR}/testfiles/tfamily00010.h5
)
SET (LIST_OTHER_TEST_FILES
${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/testfiles/h5repack_ext.bin
${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/testfiles/ublock.bin
${HDF5_TOOLS_H5REPACK_SOURCE_DIR}/testfiles/h5repack.info
# tools/testfiles
${HDF5_TOOLS_SRC_DIR}/testfiles/h5repack_filters.h5.ddl
)
FOREACH (h5_file ${LIST_HDF5_TEST_FILES} ${LIST_OTHER_TEST_FILES})
GET_FILENAME_COMPONENT(fname "${h5_file}" NAME)
SET (dest "${PROJECT_BINARY_DIR}/testfiles/${fname}")
#MESSAGE (STATUS " Copying ${h5_file}")
ADD_CUSTOM_COMMAND (
TARGET h5repack
POST_BUILD
COMMAND ${CMAKE_COMMAND}
ARGS -E copy_if_different ${h5_file} ${dest}
)
ENDFOREACH (h5_file ${LIST_HDF5_TEST_FILES} ${LIST_OTHER_TEST_FILES})
##############################################################################
##############################################################################
### T H E T E S T S M A C R O S ###
##############################################################################
##############################################################################
MACRO (ADD_H5_TEST testname testtype testfile)
IF (${testtype} STREQUAL "SKIP")
IF (NOT HDF5_ENABLE_USING_MEMCHECKER)
ADD_TEST (
NAME H5REPACK-${testname}-SKIPPED
COMMAND ${CMAKE_COMMAND} -E echo "SKIP ${ARGN} ${PROJECT_BINARY_DIR}/testfiles/${testfile} ${PROJECT_BINARY_DIR}/testfiles/out.${testfile}"
)
ENDIF (NOT HDF5_ENABLE_USING_MEMCHECKER)
ELSE (${testtype} STREQUAL "SKIP")
ADD_TEST (
NAME H5REPACK-${testname}
COMMAND $<TARGET_FILE:h5repack> ${ARGN} ${PROJECT_BINARY_DIR}/testfiles/${testfile} ${PROJECT_BINARY_DIR}/testfiles/out.${testfile}
)
IF (NOT "${last_test}" STREQUAL "")
SET_TESTS_PROPERTIES (H5REPACK-${testname} PROPERTIES DEPENDS ${last_test})
ENDIF (NOT "${last_test}" STREQUAL "")
ADD_TEST (
NAME H5REPACK-DIFF_${testname}
COMMAND $<TARGET_FILE:h5diff> ${PROJECT_BINARY_DIR}/testfiles/${testfile} ${PROJECT_BINARY_DIR}/testfiles/out.${testfile}
)
SET_TESTS_PROPERTIES (H5REPACK-DIFF_${testname} PROPERTIES DEPENDS H5REPACK-${testname})
SET (last_test "H5REPACK-DIFF_${testname}")
ENDIF (${testtype} STREQUAL "SKIP")
ENDMACRO (ADD_H5_TEST)
MACRO (ADD_H5_CMP_TEST testname testfilter testtype resultcode resultfile)
IF (${testtype} STREQUAL "SKIP")
IF (NOT HDF5_ENABLE_USING_MEMCHECKER)
ADD_TEST (
NAME H5REPACK-${testname}-SKIPPED
COMMAND ${CMAKE_COMMAND} -E echo "SKIP ${ARGN} ${PROJECT_BINARY_DIR}/testfiles/${resultfile} ${PROJECT_BINARY_DIR}/testfiles/out.${resultfile}"
)
ENDIF (NOT HDF5_ENABLE_USING_MEMCHECKER)
ELSE (${testtype} STREQUAL "SKIP")
# If using memchecker add tests without using scripts
IF (HDF5_ENABLE_USING_MEMCHECKER)
ADD_TEST (NAME H5REPACK-${testname} COMMAND $<TARGET_FILE:h5repack> ${ARGN} testfiles/${resultfile} testfiles/out.${resultfile})
ELSE (HDF5_ENABLE_USING_MEMCHECKER)
ADD_TEST (
NAME H5REPACK-${testname}
COMMAND "${CMAKE_COMMAND}"
-D "TEST_PROGRAM=$<TARGET_FILE:h5repack>"
-D "TEST_ARGS:STRING=${ARGN};testfiles/${resultfile};testfiles/out.${resultfile}"
-D "TEST_FOLDER=${PROJECT_BINARY_DIR}"
-D "TEST_OUTPUT=./testfiles/${resultfile}.out"
-D "TEST_EXPECT=${resultcode}"
-D "TEST_FILTER:STRING=${testfilter}"
-D "TEST_REFERENCE=testfiles/${resultfile}.ddl"
-P "${HDF5_RESOURCES_DIR}/runTest.cmake"
)
ENDIF (HDF5_ENABLE_USING_MEMCHECKER)
IF (NOT "${last_test}" STREQUAL "")
SET_TESTS_PROPERTIES (H5REPACK-${testname} PROPERTIES DEPENDS ${last_test})
ENDIF (NOT "${last_test}" STREQUAL "")
SET (last_test "H5REPACK-${testname}")
ENDIF (${testtype} STREQUAL "SKIP")
ENDMACRO (ADD_H5_CMP_TEST)
MACRO (ADD_H5_VERIFY_TEST testname testtype resultcode testfile testdset testfilter)
IF (${testtype} STREQUAL "SKIP")
IF (NOT HDF5_ENABLE_USING_MEMCHECKER)
ADD_TEST (
NAME H5REPACK_VERIFY_LAYOUT-${testname}-SKIPPED
COMMAND ${CMAKE_COMMAND} -E echo "SKIP -d ${testdset} -pH ${PROJECT_BINARY_DIR}/testfiles/out.${resultfile}"
)
ENDIF (NOT HDF5_ENABLE_USING_MEMCHECKER)
ELSE (${testtype} STREQUAL "SKIP")
IF (NOT HDF5_ENABLE_USING_MEMCHECKER)
IF (${resultcode} STREQUAL "0")
ADD_TEST (
NAME H5REPACK_VERIFY_LAYOUT-${testname}
COMMAND "${CMAKE_COMMAND}"
-D "TEST_PROGRAM=$<TARGET_FILE:h5dump>"
-D "TEST_ARGS:STRING=-d;${testdset};-pH;testfiles/out.${testfile}"
-D "TEST_FOLDER=${PROJECT_BINARY_DIR}"
-D "TEST_OUTPUT=./testfiles/${testfile}-v.out"
-D "TEST_EXPECT=${resultcode}"
-D "TEST_FILTER:STRING=${testfilter}"
-D "TEST_REFERENCE=${testfilter}"
-P "${HDF5_RESOURCES_DIR}/grepTest.cmake"
)
IF (NOT "${last_test}" STREQUAL "")
SET_TESTS_PROPERTIES (H5REPACK_VERIFY_LAYOUT-${testname} PROPERTIES DEPENDS ${last_test})
ENDIF (NOT "${last_test}" STREQUAL "")
SET (last_test "H5REPACK_VERIFY_LAYOUT-${testname}")
ELSE (${resultcode} STREQUAL "0")
IF (${testfilter} STREQUAL "CHUNKED")
SET (nottestfilter "(CONTIGUOUS|COMPACT)")
ENDIF (${testfilter} STREQUAL "CHUNKED")
IF (${testfilter} STREQUAL "CONTIGUOUS")
SET (nottestfilter "(CHUNK|COMPACT)")
ENDIF (${testfilter} STREQUAL "CONTIGUOUS")
IF (${testfilter} STREQUAL "COMPACT")
SET (nottestfilter "(CONTIGUOUS|CHUNK)")
ENDIF (${testfilter} STREQUAL "COMPACT")
ADD_TEST (
NAME H5REPACK_VERIFY_LAYOUT_ALL-${testname}
COMMAND "${CMAKE_COMMAND}"
-D "TEST_PROGRAM=$<TARGET_FILE:h5dump>"
-D "TEST_ARGS:STRING=-pH;testfiles/out.${testfile}"
-D "TEST_FOLDER=${PROJECT_BINARY_DIR}"
-D "TEST_OUTPUT=./testfiles/${testfile}-v.out"
-D "TEST_EXPECT=${resultcode}"
-D "TEST_FILTER:STRING=${nottestfilter}"
-D "TEST_REFERENCE=${testfilter}"
-P "${HDF5_RESOURCES_DIR}/grepTest.cmake"
)
IF (NOT "${last_test}" STREQUAL "")
SET_TESTS_PROPERTIES (H5REPACK_VERIFY_LAYOUT_ALL-${testname} PROPERTIES DEPENDS ${last_test})
ENDIF (NOT "${last_test}" STREQUAL "")
SET (last_test "H5REPACK_VERIFY_LAYOUT_ALL-${testname}")
ENDIF (${resultcode} STREQUAL "0")
ENDIF (NOT HDF5_ENABLE_USING_MEMCHECKER)
ENDIF (${testtype} STREQUAL "SKIP")
ENDMACRO (ADD_H5_VERIFY_TEST)
##############################################################################
##############################################################################
### T H E T E S T S ###
##############################################################################
##############################################################################
# Remove any output file left over from previous test run
ADD_TEST (
NAME H5REPACK-clearall-objects
COMMAND ${CMAKE_COMMAND}
-E remove
./testfiles/h5repack_filters.h5.out
./testfiles/h5repack_filters.h5.out.err
./testfiles/h5repack_layout2.h5-v.out
./testfiles/h5repack_layout2.h5-v.out.err
./testfiles/h5repack_layout.h5-v.out
./testfiles/h5repack_layout.h5-v.out.err
./testfiles/out.h5diff_attr1.h5
./testfiles/out.h5repack_attr.h5
./testfiles/out.h5repack_deflate.h5
./testfiles/out.h5repack_early.h5
./testfiles/out.h5repack_fill.h5
./testfiles/out.h5repack_filters.h5
./testfiles/out.h5repack_fletcher.h5
./testfiles/out.h5repack_hlink.h5
./testfiles/out.h5repack_layout2.h5
./testfiles/out.h5repack_layout.h5
./testfiles/out.h5repack_layouto.h5
./testfiles/out.h5repack_named_dtypes.h5
./testfiles/out.h5repack_nbit.h5
./testfiles/out.h5repack_objs.h5
./testfiles/out.h5repack_refs.h5
./testfiles/out.h5repack_shuffle.h5
./testfiles/out.h5repack_soffset.h5
# from the h5repacktst
h5repack_attr.h5
h5repack_attr_out.h5
h5repack_attr_refs.h5
h5repack_big.h5
h5repack_deflate.h5
h5repack_deflate_out.h5
h5repack_early2.h5
h5repack_early.h5
h5repack_early_out.h5
h5repack_ext.h5
h5repack_ext_out.h5
h5repack_fill.h5
h5repack_fill_out.h5
h5repack_filters.h5
h5repack_filters_out.h5
h5repack_fletcher.h5
h5repack_fletcher_out.h5
h5repack_hlink.h5
h5repack_hlink_out.h5
h5repack_layout2.h5
h5repack_layout.h5
h5repack_layout_out.h5
h5repack_named_dtypes.h5
h5repack_named_dtypes_out.h5
h5repack_nbit.h5
h5repack_nbit_out.h5
h5repack_objs.h5
h5repack_objs_out.h5
h5repack_refs.h5
h5repack_shuffle.h5
h5repack_shuffle_out.h5
h5repack_soffset.h5
h5repack_soffset_out.h5
h5repack_szip.h5
h5repack_szip_out.h5
h5repack_ub.h5
h5repack_ub_out.h5
h5repack_ext.bin
ublock.bin
)
IF (NOT "${last_test}" STREQUAL "")
SET_TESTS_PROPERTIES (H5REPACK-clearall-objects PROPERTIES DEPENDS ${last_test})
ENDIF (NOT "${last_test}" STREQUAL "")
SET (last_test "H5REPACK-clearall-objects")
# --------------------------------------------------------------------
# test file names
# --------------------------------------------------------------------
SET (INFO_FILE testfiles/h5repack.info)
SET (FILE0 h5repack_fill.h5)
SET (FILE1 h5repack_objs.h5)
SET (FILE2 h5repack_attr.h5)
SET (FILE3 h5repack_hlink.h5)
SET (FILE4 h5repack_layout.h5)
SET (FILE5 h5repack_early.h5)
SET (FILE7 h5repack_szip.h5)
SET (FILE8 h5repack_deflate.h5)
SET (FILE9 h5repack_shuffle.h5)
SET (FILE10 h5repack_fletcher.h5)
SET (FILE11 h5repack_filters.h5)
SET (FILE12 h5repack_nbit.h5)
SET (FILE13 h5repack_soffset.h5)
SET (FILE14 h5repack_layouto.h5 ) # A file with an older version of the layout message (copy of test/tlayouto.h5)
SET (FILE15 h5repack_named_dtypes.h5)
SET (FILE16 tfamily%05d.h5) # located in common testfiles folder
SET (FILE18 h5repack_layout2.h5)
SET (FILE_REF h5repack_refs.h5)
SET (FILE_ATTR_REF h5repack_attr_refs.h5)
ADD_TEST (NAME H5REPACK-testh5repack_detect_szip COMMAND $<TARGET_FILE:testh5repack_detect_szip>)
IF (HDF5_ENABLE_SZIP_SUPPORT)
IF (HDF5_ENABLE_SZIP_ENCODING)
SET (passRegex "yes")
SET_TESTS_PROPERTIES (H5REPACK-testh5repack_detect_szip PROPERTIES PASS_REGULAR_EXPRESSION "yes")
ELSE (HDF5_ENABLE_SZIP_ENCODING)
SET (passRegex "no")
SET_TESTS_PROPERTIES (H5REPACK-testh5repack_detect_szip PROPERTIES PASS_REGULAR_EXPRESSION "no")
ENDIF (HDF5_ENABLE_SZIP_ENCODING)
ELSE (HDF5_ENABLE_SZIP_SUPPORT)
SET (passRegex "no")
SET_TESTS_PROPERTIES (H5REPACK-testh5repack_detect_szip PROPERTIES PASS_REGULAR_EXPRESSION "no")
ENDIF (HDF5_ENABLE_SZIP_SUPPORT)
IF (NOT "${last_test}" STREQUAL "")
SET_TESTS_PROPERTIES (H5REPACK-testh5repack_detect_szip PROPERTIES DEPENDS ${last_test})
ENDIF (NOT "${last_test}" STREQUAL "")
SET (last_test "H5REPACK-testh5repack_detect_szip")
ADD_TEST (NAME H5REPACK-h5repacktest COMMAND $<TARGET_FILE:h5repacktest>)
IF (NOT "${last_test}" STREQUAL "")
SET_TESTS_PROPERTIES (H5REPACK-h5repacktest PROPERTIES DEPENDS ${last_test})
ENDIF (NOT "${last_test}" STREQUAL "")
SET (last_test "H5REPACK-h5repacktest")
#
# The tests
# We use the files generated by h5repacktst
# Each run generates "<file>.out.h5" and the tool h5diff is used to
# compare the input and output files
#
# the tests are the same as the program h5repacktst, but run from the CLI
#
# See which filters are usable (and skip tests for filters we
# don't have). Do this by searching H5pubconf.h to see which
# filters are defined.
# detect whether the encoder is present.
SET (USE_FILTER_SZIP_ENCODER "no")
IF (HDF5_ENABLE_SZIP_ENCODING)
SET (USE_FILTER_SZIP_ENCODER ${testh5repack_detect_szip})
ENDIF (HDF5_ENABLE_SZIP_ENCODING)
IF (H5_HAVE_FILTER_DEFLATE)
SET (USE_FILTER_DEFLATE "true")
ENDIF (H5_HAVE_FILTER_DEFLATE)
IF (H5_HAVE_FILTER_SZIP)
SET (USE_FILTER_SZIP "true")
ENDIF (H5_HAVE_FILTER_SZIP)
IF (H5_HAVE_FILTER_SHUFFLE)
SET (USE_FILTER_SHUFFLE "true")
ENDIF (H5_HAVE_FILTER_SHUFFLE)
IF (H5_HAVE_FILTER_FLETCHER32)
SET (USE_FILTER_FLETCHER32 "true")
ENDIF (H5_HAVE_FILTER_FLETCHER32)
IF (H5_HAVE_FILTER_NBIT)
SET (USE_FILTER_NBIT "true")
ENDIF (H5_HAVE_FILTER_NBIT)
IF (H5_HAVE_FILTER_SCALEOFFSET)
SET (USE_FILTER_SCALEOFFSET "true")
ENDIF (H5_HAVE_FILTER_SCALEOFFSET)
# copy files (these files have no filters)
ADD_H5_TEST (fill "TEST" ${FILE0})
ADD_H5_TEST (objs "TEST" ${FILE1})
ADD_H5_TEST (attr "TEST" ${FILE2})
ADD_H5_TEST (hlink "TEST" ${FILE3})
ADD_H5_TEST (layout "TEST" ${FILE4})
ADD_H5_TEST (early "TEST" ${FILE5})
# use $FILE4 to write some filters (this file has no filters)
# gzip with individual object
SET (arg ${FILE4} -f dset1:GZIP=1 -l dset1:CHUNK=20x10)
SET (TESTTYPE "TEST")
IF (NOT USE_FILTER_DEFLATE)
SET (TESTTYPE "SKIP")
ENDIF (NOT USE_FILTER_DEFLATE)
ADD_H5_TEST (gzip_individual ${TESTTYPE} ${arg})
# gzip for all
SET (arg ${FILE4} -f GZIP=1)
SET (TESTTYPE "TEST")
IF (NOT USE_FILTER_DEFLATE)
SET (TESTTYPE "SKIP")
ENDIF (NOT USE_FILTER_DEFLATE)
ADD_H5_TEST (gzip_all ${TESTTYPE} ${arg})
# szip with individual object
SET (arg ${FILE4} -f dset2:SZIP=8,EC -l dset2:CHUNK=20x10)
SET (TESTTYPE "TEST")
IF (NOT USE_FILTER_SZIP_ENCODER OR NOT USE_FILTER_SZIP)
SET (TESTTYPE "SKIP")
ENDIF (NOT USE_FILTER_SZIP_ENCODER OR NOT USE_FILTER_SZIP)
ADD_H5_TEST (szip_individual ${TESTTYPE} ${arg})
# szip for all
SET (arg ${FILE4} -f SZIP=8,NN)
SET (TESTTYPE "TEST")
IF (NOT USE_FILTER_SZIP_ENCODER OR NOT USE_FILTER_SZIP)
SET (TESTTYPE "SKIP")
ENDIF (NOT USE_FILTER_SZIP_ENCODER OR NOT USE_FILTER_SZIP)
ADD_H5_TEST (szip_all ${TESTTYPE} ${arg})
# shuffle with individual object
SET (arg ${FILE4} -f dset2:SHUF -l dset2:CHUNK=20x10)
SET (TESTTYPE "TEST")
IF (NOT USE_FILTER_SHUFFLE)
SET (TESTTYPE "SKIP")
ENDIF (NOT USE_FILTER_SHUFFLE)
ADD_H5_TEST (shuffle_individual ${TESTTYPE} ${arg})
# shuffle for all
SET (arg ${FILE4} -f SHUF)
SET (TESTTYPE "TEST")
IF (NOT USE_FILTER_SHUFFLE)
SET (TESTTYPE "SKIP")
ENDIF (NOT USE_FILTER_SHUFFLE)
ADD_H5_TEST (shuffle_all ${TESTTYPE} ${arg})
# fletcher32 with individual object
SET (arg ${FILE4} -f dset2:FLET -l dset2:CHUNK=20x10)
SET (TESTTYPE "TEST")
IF (NOT USE_FILTER_FLETCHER32)
SET (TESTTYPE "SKIP")
ENDIF (NOT USE_FILTER_FLETCHER32)
ADD_H5_TEST (fletcher_individual ${TESTTYPE} ${arg})
# fletcher32 for all
SET (arg ${FILE4} -f FLET)
SET (TESTTYPE "TEST")
IF (NOT USE_FILTER_FLETCHER32)
SET (TESTTYPE "SKIP")
ENDIF (NOT USE_FILTER_FLETCHER32)
ADD_H5_TEST (fletcher_all ${TESTTYPE} ${arg})
# all filters
SET (arg ${FILE4} -f dset2:SHUF -f dset2:FLET -f dset2:SZIP=8,NN -f dset2:GZIP=1 -l dset2:CHUNK=20x10)
SET (TESTTYPE "TEST")
IF (NOT USE_FILTER_SZIP_ENCODER OR NOT USE_FILTER_SZIP OR NOT USE_FILTER_SHUFFLE OR NOT USE_FILTER_FLETCHER32 OR NOT USE_FILTER_DEFLATE)
SET (TESTTYPE "SKIP")
ENDIF (NOT USE_FILTER_SZIP_ENCODER OR NOT USE_FILTER_SZIP OR NOT USE_FILTER_SHUFFLE OR NOT USE_FILTER_FLETCHER32 OR NOT USE_FILTER_DEFLATE)
ADD_H5_TEST (all_filters ${TESTTYPE} ${arg})
# verbose gzip with individual object
SET (arg ${FILE11} -v -f /dset_deflate:GZIP=9)
SET (TESTTYPE "TEST")
IF (NOT USE_FILTER_DEFLATE)
SET (TESTTYPE "SKIP")
ENDIF (NOT USE_FILTER_DEFLATE)
ADD_H5_CMP_TEST (gzip_verbose_filters "O?...ing file[^\n]+\n" ${TESTTYPE} 0 ${arg})
###########################################################
# the following tests assume the input files have filters
###########################################################
# szip copy
SET (arg ${FILE7})
SET (TESTTYPE "TEST")
IF (NOT USE_FILTER_SZIP_ENCODER OR NOT USE_FILTER_SZIP)
SET (TESTTYPE "SKIP")
ENDIF (NOT USE_FILTER_SZIP_ENCODER OR NOT USE_FILTER_SZIP)
ADD_H5_TEST (szip_copy ${TESTTYPE} ${arg})
# szip remove
SET (arg ${FILE7} --filter=dset_szip:NONE)
SET (TESTTYPE "TEST")
IF (NOT USE_FILTER_SZIP_ENCODER OR NOT USE_FILTER_SZIP)
SET (TESTTYPE "SKIP")
ENDIF (NOT USE_FILTER_SZIP_ENCODER OR NOT USE_FILTER_SZIP)
ADD_H5_TEST (szip_remove ${TESTTYPE} ${arg})
# deflate copy
SET (arg ${FILE8})
SET (TESTTYPE "TEST")
IF (NOT USE_FILTER_DEFLATE)
SET (TESTTYPE "SKIP")
ENDIF (NOT USE_FILTER_DEFLATE)
ADD_H5_TEST (deflate_copy ${TESTTYPE} ${arg})
# deflate remove
SET (arg ${FILE8} -f dset_deflate:NONE)
SET (TESTTYPE "TEST")
IF (NOT USE_FILTER_DEFLATE)
SET (TESTTYPE "SKIP")
ENDIF (NOT USE_FILTER_DEFLATE)
ADD_H5_TEST (deflate_remove ${TESTTYPE} ${arg})
# shuffle copy
SET (arg ${FILE9})
SET (TESTTYPE "TEST")
IF (NOT USE_FILTER_SHUFFLE)
SET (TESTTYPE "SKIP")
ENDIF (NOT USE_FILTER_SHUFFLE)
ADD_H5_TEST (shuffle_copy ${TESTTYPE} ${arg})
# shuffle remove
SET (arg ${FILE9} -f dset_shuffle:NONE)
SET (TESTTYPE "TEST")
IF (NOT USE_FILTER_SHUFFLE)
SET (TESTTYPE "SKIP")
ENDIF (NOT USE_FILTER_SHUFFLE)
ADD_H5_TEST (shuffle_remove ${TESTTYPE} ${arg})
# fletcher32 copy
SET (arg ${FILE10})
SET (TESTTYPE "TEST")
IF (NOT USE_FILTER_FLETCHER32)
SET (TESTTYPE "SKIP")
ENDIF (NOT USE_FILTER_FLETCHER32)
ADD_H5_TEST (fletcher_copy ${TESTTYPE} ${arg})
# fletcher32 remove
SET (arg ${FILE10} -f dset_fletcher32:NONE)
SET (TESTTYPE "TEST")
IF (NOT USE_FILTER_FLETCHER32)
SET (TESTTYPE "SKIP")
ENDIF (NOT USE_FILTER_FLETCHER32)
ADD_H5_TEST (fletcher_remove ${TESTTYPE} ${arg})
# nbit copy
SET (arg ${FILE12})
SET (TESTTYPE "TEST")
IF (NOT USE_FILTER_NBIT)
SET (TESTTYPE "SKIP")
ENDIF (NOT USE_FILTER_NBIT)
ADD_H5_TEST (nbit_copy ${TESTTYPE} ${arg})
# nbit remove
SET (arg ${FILE12} -f dset_nbit:NONE)
SET (TESTTYPE "TEST")
IF (NOT USE_FILTER_NBIT)
SET (TESTTYPE "SKIP")
ENDIF (NOT USE_FILTER_NBIT)
ADD_H5_TEST (nbit_remove ${TESTTYPE} ${arg})
# nbit add
SET (arg ${FILE12} -f dset_int31:NBIT)
SET (TESTTYPE "TEST")
IF (NOT USE_FILTER_NBIT)
SET (TESTTYPE "SKIP")
ENDIF (NOT USE_FILTER_NBIT)
ADD_H5_TEST (nbit_add ${TESTTYPE} ${arg})
# scaleoffset copy
SET (arg ${FILE13})
SET (TESTTYPE "TEST")
IF (NOT USE_FILTER_SCALEOFFSET)
SET (TESTTYPE "SKIP")
ENDIF (NOT USE_FILTER_SCALEOFFSET)
ADD_H5_TEST (scale_copy ${TESTTYPE} ${arg})
# scaleoffset add
SET (arg ${FILE13} -f dset_none:SOFF=31,IN)
SET (TESTTYPE "TEST")
IF (NOT USE_FILTER_SCALEOFFSET)
SET (TESTTYPE "SKIP")
ENDIF (NOT USE_FILTER_SCALEOFFSET)
ADD_H5_TEST (scale_add ${TESTTYPE} ${arg})
# scaleoffset remove
SET (arg ${FILE13} -f dset_scaleoffset:NONE)
SET (TESTTYPE "TEST")
IF (NOT USE_FILTER_SCALEOFFSET)
SET (TESTTYPE "SKIP")
ENDIF (NOT USE_FILTER_SCALEOFFSET)
ADD_H5_TEST (scale_remove ${TESTTYPE} ${arg})
# remove all filters
SET (arg ${FILE11} -f NONE)
SET (TESTTYPE "TEST")
IF (NOT USE_FILTER_FLETCHER32 OR NOT USE_FILTER_DEFLATE OR NOT USE_FILTER_SZIP OR NOT USE_FILTER_SZIP_ENCODER OR NOT USE_FILTER_SHUFFLE OR NOT USE_FILTER_NBIT OR NOT USE_FILTER_SCALEOFFSET)
SET (TESTTYPE "SKIP")
ENDIF (NOT USE_FILTER_FLETCHER32 OR NOT USE_FILTER_DEFLATE OR NOT USE_FILTER_SZIP OR NOT USE_FILTER_SZIP_ENCODER OR NOT USE_FILTER_SHUFFLE OR NOT USE_FILTER_NBIT OR NOT USE_FILTER_SCALEOFFSET)
ADD_H5_TEST (remove_all ${TESTTYPE} ${arg})
#filter conversions
SET (arg ${FILE8} -f dset_deflate:SZIP=8,NN)
SET (TESTTYPE "TEST")
IF (NOT USE_FILTER_SZIP_ENCODER OR NOT USE_FILTER_SZIP OR NOT USE_FILTER_DEFLATE)
SET (TESTTYPE "SKIP")
ENDIF (NOT USE_FILTER_SZIP_ENCODER OR NOT USE_FILTER_SZIP OR NOT USE_FILTER_DEFLATE)
ADD_H5_TEST (deflate_convert ${TESTTYPE} ${arg})
SET (arg ${FILE7} -f dset_szip:GZIP=1)
SET (TESTTYPE "TEST")
IF (NOT USE_FILTER_SZIP OR NOT USE_FILTER_SZIP_ENCODER OR NOT USE_FILTER_DEFLATE)
SET (TESTTYPE "SKIP")
ENDIF (NOT USE_FILTER_SZIP OR NOT USE_FILTER_SZIP_ENCODER OR NOT USE_FILTER_DEFLATE)
ADD_H5_TEST (szip_convert ${TESTTYPE} ${arg})
#limit
SET (arg ${FILE4} -f GZIP=1 -m 1024)
SET (TESTTYPE "TEST")
IF (NOT USE_FILTER_DEFLATE)
SET (TESTTYPE "SKIP")
ENDIF (NOT USE_FILTER_DEFLATE)
ADD_H5_TEST (deflate_limit ${TESTTYPE} ${arg})
#file
SET (arg ${FILE4} -e ${INFO_FILE})
SET (TESTTYPE "TEST")
IF (NOT USE_FILTER_DEFLATE)
SET (TESTTYPE "SKIP")
ENDIF (NOT USE_FILTER_DEFLATE)
ADD_H5_TEST (deflate_file ${TESTTYPE} ${arg})
#########################################################
# layout options (these files have no filters)
#########################################################
ADD_H5_TEST (dset2_chunk_20x10 "TEST" ${FILE4} --layout=dset2:CHUNK=20x10)
ADD_H5_VERIFY_TEST (dset2_chunk_20x10 "TEST" 0 ${FILE4} dset2 CHUNKED)
ADD_H5_TEST (chunk_20x10 "TEST" ${FILE4} -l CHUNK=20x10)
ADD_H5_VERIFY_TEST (chunk_20x10 "TEST" 1 ${FILE4} null CHUNKED)
ADD_H5_TEST (dset2_conti "TEST" ${FILE4} -l dset2:CONTI)
ADD_H5_VERIFY_TEST (dset2_conti "TEST" 0 ${FILE4} dset2 CONTIGUOUS)
ADD_H5_TEST (conti "TEST" ${FILE4} -l CONTI)
ADD_H5_VERIFY_TEST (conti "TEST" 1 ${FILE4} null CONTIGUOUS)
ADD_H5_TEST (dset2_compa "TEST" ${FILE4} -l dset2:COMPA)
ADD_H5_VERIFY_TEST (dset2_compa "TEST" 0 ${FILE4} dset2 COMPACT)
ADD_H5_TEST (compa "TEST" ${FILE4} -l COMPA)
ADD_H5_VERIFY_TEST (compa "TEST" 1 ${FILE4} null COMPACT)
################################################################
# layout conversions (file has no filters)
###############################################################
ADD_H5_TEST (dset_compa_conti "TEST" ${FILE4} -l dset_compact:CONTI)
ADD_H5_VERIFY_TEST (dset_compa_conti "TEST" 0 ${FILE4} dset_compact CONTIGUOUS)
ADD_H5_TEST (dset_compa_chunk "TEST" ${FILE4} -l dset_compact:CHUNK=2x5)
ADD_H5_VERIFY_TEST (dset_compa_chunk "TEST" 0 ${FILE4} dset_compact CHUNKED)
ADD_H5_TEST (dset_compa_compa "TEST" ${FILE4} -l dset_compact:COMPA)
ADD_H5_VERIFY_TEST (dset_compa_compa "TEST" 0 ${FILE4} dset_compact COMPACT)
ADD_H5_TEST (dset_conti_compa "TEST" ${FILE4} -l dset_contiguous:COMPA)
ADD_H5_VERIFY_TEST (dset_conti_compa "TEST" 0 ${FILE4} dset_contiguous COMPACT)
ADD_H5_TEST (dset_conti_chunk "TEST" ${FILE4} -l dset_contiguous:CHUNK=3x6)
ADD_H5_VERIFY_TEST (dset_conti_chunk "TEST" 0 ${FILE4} dset_contiguous CHUNKED)
ADD_H5_TEST (dset_conti_conti "TEST" ${FILE4} -l dset_contiguous:CONTI)
ADD_H5_VERIFY_TEST (dset_conti_conti "TEST" 0 ${FILE4} dset_contiguous CONTIGUOUS)
ADD_H5_TEST (chunk_compa "TEST" ${FILE4} -l dset_chunk:COMPA)
ADD_H5_VERIFY_TEST (chunk_compa "TEST" 0 ${FILE4} dset_chunk COMPACT)
ADD_H5_TEST (chunk_conti "TEST" ${FILE4} -l dset_chunk:CONTI)
ADD_H5_VERIFY_TEST (chunk_conti "TEST" 0 ${FILE4} dset_chunk CONTIGUOUS)
ADD_H5_TEST (chunk_18x13 "TEST" ${FILE4} -l dset_chunk:CHUNK=18x13)
ADD_H5_VERIFY_TEST (chunk_18x13 "TEST" 0 ${FILE4} dset_chunk CHUNKED)
# test convert small size dataset ( < 1k) to compact layout without -m
ADD_H5_TEST (contig_small_compa "TEST" ${FILE18} -l contig_small:COMPA)
ADD_H5_VERIFY_TEST (contig_small_compa "TEST" 0 ${FILE18} contig_small COMPACT)
ADD_H5_TEST (contig_small_fixed_compa "TEST" ${FILE18} -l chunked_small_fixed:COMPA)
ADD_H5_VERIFY_TEST (contig_small_fixed_compa "TEST" 0 ${FILE18} chunked_small_fixed COMPACT)
# Native option
# Do not use FILE1, as the named dtype will be converted to native, and h5diff will
# report a difference.
ADD_H5_TEST (native_fill "TEST" ${FILE0} -n)
ADD_H5_TEST (native_attr "TEST" ${FILE2} -n)
# latest file format with long switches. use FILE4=h5repack_layout.h5 (no filters)
SET (arg ${FILE4} --layout CHUNK=20x10 --filter GZIP=1 --minimum=10 --native --latest --compact=8 --indexed=6 --ssize=8[:dtype])
SET (TESTTYPE "TEST")
IF (NOT USE_FILTER_DEFLATE)
SET (TESTTYPE "SKIP")
ENDIF (NOT USE_FILTER_DEFLATE)
ADD_H5_TEST (layout_long_switches ${TESTTYPE} ${arg})
ADD_H5_VERIFY_TEST (layout_long_switches ${TESTTYPE} 1 ${FILE4} null CHUNKED)
# latest file format with short switches. use FILE4=h5repack_layout.h5 (no filters)
SET (arg ${FILE4} -l CHUNK=20x10 -f GZIP=1 -m 10 -n -L -c 8 -d 6 -s 8[:dtype])
SET (TESTTYPE "TEST")
IF (NOT USE_FILTER_DEFLATE)
SET (TESTTYPE "SKIP")
ENDIF (NOT USE_FILTER_DEFLATE)
ADD_H5_TEST (layout_short_switches ${TESTTYPE} ${arg})
ADD_H5_VERIFY_TEST (layout_short_switches ${TESTTYPE} 1 ${FILE4} null CHUNKED)
# several global filters
SET (arg ${FILE4} --filter GZIP=1 --filter SHUF)
SET (TESTTYPE "TEST")
IF (NOT USE_FILTER_DEFLATE OR NOT USE_FILTER_SHUFFLE)
SET (TESTTYPE "SKIP")
ENDIF (NOT USE_FILTER_DEFLATE OR NOT USE_FILTER_SHUFFLE)
ADD_H5_TEST (global_filters ${TESTTYPE} ${arg})
# syntax of -i infile -o outfile
# latest file format with short switches. use FILE4=h5repack_layout.h5 (no filters)
SET (arg ${FILE4} -l CHUNK=20x10 -f GZIP=1 -m 10 -n -L -c 8 -d 6 -s 8[:dtype])
SET (TESTTYPE "LEGACY")
IF (NOT USE_FILTER_DEFLATE)
SET (TESTTYPE "SKIP")
ENDIF (NOT USE_FILTER_DEFLATE)
# ADD_H5_TEST (old_style_layout_short_switches ${TESTTYPE} ${arg})
# add a userblock to file
SET (arg ${FILE1} -u ${PROJECT_BINARY_DIR}/testfiles/ublock.bin -b 2048)
ADD_H5_TEST (add_userblock "TEST" ${arg})
# add alignment
SET (arg ${FILE1} -t 1 -a 1)
ADD_H5_TEST (add_alignment "TEST" ${arg})
# Check repacking file with old version of layout message (should get upgraded
# to new version and be readable, etc.)
ADD_H5_TEST (upgrade_layout "TEST" ${FILE14})
# test for datum size > H5TOOLS_MALLOCSIZE
ADD_H5_TEST (gt_mallocsize "TEST" ${FILE1} -f GZIP=1)
# Check repacking file with committed datatypes in odd configurations
ADD_H5_TEST (committed_dt "TEST" ${FILE15})
# tests family driver (file is located in common testfiles folder, uses TOOLTEST1
# ADD_H5_TEST ( family "FAMILY" ${FILE16})
# test various references (bug 1814 and 1726)
ADD_H5_TEST (bug1814 "TEST" ${FILE_REF})
# test attribute with various references in attribute of compund
# or vlen datatype
# (HDFFV-2605, 7513)
# TODO: include this test when code portion is completed.
ADD_H5_TEST (HDFFV-2605 "SKIP" ${FILE_ATTR_REF})
# Add test for memory leak in attirbute. This test is verified by CTEST.
# 1. leak from vlen string
# 2. leak from compound type without reference member
# (HDFFV-7840, )
# Note: this test is experimental for sharing test file among tools
ADD_H5_TEST (HDFFV-7840 "TEST" h5diff_attr1.h5)
IF (HDF5_TEST_VFD)
# Run test with different Virtual File Driver
FOREACH (vfd ${VFD_LIST})
ADD_VFD_TEST (${vfd} 0)
ENDFOREACH (vfd ${VFD_LIST})
ENDIF (HDF5_TEST_VFD)
ENDIF (BUILD_TESTING)
##############################################################################
##############################################################################
### I N S T A L L A T I O N ###
##############################################################################
##############################################################################
#-----------------------------------------------------------------------------
# Rules for Installation of tools using make Install target
#-----------------------------------------------------------------------------
INSTALL (
TARGETS
h5repack
RUNTIME DESTINATION
${HDF5_INSTALL_BIN_DIR}/tools
COMPONENT
toolsapplications
)
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