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7f1e49206d
This is where most people will expect to find license information. The COPYING_LBNL_HDF5 file has also been renamed to LICENSE_LBNL_HDF5. The licenses are unchanged.
1477 lines
49 KiB
C
1477 lines
49 KiB
C
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
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* Copyright by The HDF Group. *
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* All rights reserved. *
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* *
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* This file is part of HDF5. The full HDF5 copyright notice, including *
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* terms governing use, modification, and redistribution, is contained in *
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* the LICENSE file, which can be found at the root of the source code *
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* distribution tree, or in https://www.hdfgroup.org/licenses. *
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* If you do not have access to either file, you may request a copy from *
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* help@hdfgroup.org. *
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* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
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/*
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* Purpose: Tests datasets stored in external raw files.
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*/
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#include "external_common.h"
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#include "external_fname.h"
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#define AEF_EXNAME_MAX_LEN 12 /* string buffer size for external file name */
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/* used in __add_external_files() */
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/*-------------------------------------------------------------------------
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* Function: files_have_same_contents
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*
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* Purpose: Determines whether two files contain the same data.
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*
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* Return: Success: nonzero if same, zero if different.
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* Failure: zero
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*
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*-------------------------------------------------------------------------
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*/
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static bool
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files_have_same_contents(const char *name1, const char *name2)
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{
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int fd1 = 0;
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int fd2 = 0;
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ssize_t n1 = 0;
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ssize_t n2 = 0;
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char buf1[1024];
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char buf2[1024];
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bool ret = false; /* not equal until proven otherwise */
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if ((fd1 = HDopen(name1, O_RDONLY)) < 0)
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goto out;
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if ((fd2 = HDopen(name2, O_RDONLY)) < 0)
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goto out;
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/* Loop until files are empty or we encounter a problem */
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while (1) {
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memset(buf1, 0, sizeof(buf1));
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memset(buf2, 0, sizeof(buf2));
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n1 = HDread(fd1, buf1, sizeof(buf1));
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if (n1 < 0 || (size_t)n1 > sizeof(buf1))
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break;
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n2 = HDread(fd2, buf2, sizeof(buf2));
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if (n2 < 0 || (size_t)n2 > sizeof(buf2))
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break;
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if (n1 != n2)
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break;
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if (n1 == 0 && n2 == 0) {
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ret = true;
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break;
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}
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if (memcmp(buf1, buf2, (size_t)n1) != 0)
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break;
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} /* end while */
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out:
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if (fd1)
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HDclose(fd1);
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if (fd2)
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HDclose(fd2);
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return ret;
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} /* end files_have_same_contents() */
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/*-------------------------------------------------------------------------
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* Function: test_non_extendible
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*
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* Purpose: Tests a non-extendible dataset with a single external file.
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*
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* Return: Success: 0
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* Failure: 1
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*
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*-------------------------------------------------------------------------
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*/
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static int
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test_non_extendible(hid_t file)
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{
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hid_t dcpl = H5I_INVALID_HID; /* dataset creation properties */
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hid_t space = H5I_INVALID_HID; /* data space */
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hid_t dset = H5I_INVALID_HID; /* dataset */
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hsize_t cur_size[1] = {100}; /* data space current size */
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hsize_t max_size[1] = {100}; /* data space maximum size */
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int n = 0; /* number of external files */
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HDoff_t file_offset = 0; /* external file offset */
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hsize_t file_size = 0; /* sizeof external file segment */
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haddr_t dset_addr = HADDR_UNDEF; /* address of dataset */
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TESTING("fixed-size data space, exact storage");
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/* Create the dataset and close */
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if ((dcpl = H5Pcreate(H5P_DATASET_CREATE)) < 0)
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FAIL_STACK_ERROR;
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if (H5Pset_external(dcpl, "ext1.data", 0, (hsize_t)(max_size[0] * sizeof(int))) < 0)
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FAIL_STACK_ERROR;
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if ((space = H5Screate_simple(1, cur_size, max_size)) < 0)
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FAIL_STACK_ERROR;
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if ((dset = H5Dcreate2(file, "dset1", H5T_NATIVE_INT, space, H5P_DEFAULT, dcpl, H5P_DEFAULT)) < 0)
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FAIL_STACK_ERROR;
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if (H5Dclose(dset) < 0)
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FAIL_STACK_ERROR;
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if (H5Sclose(space) < 0)
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FAIL_STACK_ERROR;
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if (H5Pclose(dcpl) < 0)
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FAIL_STACK_ERROR;
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/* Read dataset creation information */
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if ((dset = H5Dopen2(file, "dset1", H5P_DEFAULT)) < 0)
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FAIL_STACK_ERROR;
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/* Test dataset address. Should be undefined. */
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H5E_BEGIN_TRY
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{
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dset_addr = H5Dget_offset(dset);
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}
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H5E_END_TRY
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if (dset_addr != HADDR_UNDEF)
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FAIL_STACK_ERROR;
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/* Check external count */
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if ((dcpl = H5Dget_create_plist(dset)) < 0)
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FAIL_STACK_ERROR;
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if ((n = H5Pget_external_count(dcpl)) < 0)
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FAIL_STACK_ERROR;
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if (1 != n) {
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H5_FAILED();
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puts(" Returned external count is wrong.");
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printf(" got: %d\n ans: 1\n", n);
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goto error;
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}
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/* Verify external file settings */
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if (H5Pget_external(dcpl, 0, 0, NULL, &file_offset, &file_size) < 0)
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FAIL_STACK_ERROR;
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if (file_offset != 0) {
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H5_FAILED();
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puts(" Wrong file offset.");
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printf(" got: %lu\n ans: 0\n", (unsigned long)file_offset);
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goto error;
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}
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if (file_size != (max_size[0] * sizeof(int))) {
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H5_FAILED();
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puts(" Wrong file size.");
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printf(" got: %" PRIuHSIZE "\n ans: %" PRIuHSIZE "\n", file_size, max_size[0] * sizeof(int));
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goto error;
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}
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/* Done (dataspace was previously closed) */
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if (H5Pclose(dcpl) < 0)
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FAIL_STACK_ERROR;
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if (H5Dclose(dset) < 0)
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FAIL_STACK_ERROR;
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PASSED();
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return 0;
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error:
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H5E_BEGIN_TRY
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{
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H5Pclose(dcpl);
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H5Sclose(space);
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H5Dclose(dset);
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}
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H5E_END_TRY
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return 1;
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} /* end test_non_extendible() */
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/*-------------------------------------------------------------------------
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* Function: test_too_small
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*
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* Purpose: Test a single external file which is too small to represent
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* all the data.
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*
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* Return: Success: 0
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* Failure: 1
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*
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*-------------------------------------------------------------------------
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*/
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static int
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test_too_small(hid_t file)
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{
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hid_t dcpl = H5I_INVALID_HID; /* dataset creation properties */
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hid_t space = H5I_INVALID_HID; /* data space */
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hid_t dset = H5I_INVALID_HID; /* dataset */
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hsize_t cur_size[1] = {100}; /* current data space size */
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hsize_t max_size[1] = {100}; /* maximum data space size */
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TESTING("external storage is too small");
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if ((dcpl = H5Pcreate(H5P_DATASET_CREATE)) < 0)
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FAIL_STACK_ERROR;
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if (H5Pset_external(dcpl, "ext1.data", 0, (hsize_t)(max_size[0] * sizeof(int) - 1)) < 0) /* note -1 */
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FAIL_STACK_ERROR;
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if ((space = H5Screate_simple(1, cur_size, max_size)) < 0)
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FAIL_STACK_ERROR;
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H5E_BEGIN_TRY
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{
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dset = H5Dcreate2(file, "dset2", H5T_NATIVE_INT, space, H5P_DEFAULT, dcpl, H5P_DEFAULT);
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}
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H5E_END_TRY
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if (dset >= 0)
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FAIL_PUTS_ERROR(" Small external file succeeded instead of failing.");
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if (H5Sclose(space) < 0)
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FAIL_STACK_ERROR;
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if (H5Pclose(dcpl) < 0)
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FAIL_STACK_ERROR;
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PASSED();
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return 0;
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error:
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H5E_BEGIN_TRY
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{
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H5Sclose(space);
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H5Pclose(dcpl);
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H5Dclose(dset);
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}
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H5E_END_TRY
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return 1;
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} /* end test_too_small() */
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/*-------------------------------------------------------------------------
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* Function: test_large_enough_current_eventual
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*
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* Purpose: Test a single external file which is large enough to
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* represent the current data and large enough to represent the
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* eventual size of the data.
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*
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* Return: Success: 0
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* Failure: 1
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*
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*-------------------------------------------------------------------------
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*/
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static int
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test_large_enough_current_eventual(hid_t file)
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{
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hid_t dcpl = H5I_INVALID_HID; /* dataset creation properties */
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hid_t space = H5I_INVALID_HID; /* data space */
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hid_t dset = H5I_INVALID_HID; /* dataset */
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hsize_t cur_size[1] = {100}; /* current data space size */
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hsize_t max_size[1] = {200}; /* maximum data space size */
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TESTING("extendible dataspace, exact external size");
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if ((dcpl = H5Pcreate(H5P_DATASET_CREATE)) < 0)
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FAIL_STACK_ERROR;
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if (H5Pset_external(dcpl, "ext1.data", 0, (hsize_t)(max_size[0] * sizeof(int))) < 0)
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FAIL_STACK_ERROR;
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if ((space = H5Screate_simple(1, cur_size, max_size)) < 0)
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FAIL_STACK_ERROR;
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if ((dset = H5Dcreate2(file, "dset3", H5T_NATIVE_INT, space, H5P_DEFAULT, dcpl, H5P_DEFAULT)) < 0)
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FAIL_STACK_ERROR;
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if (H5Dclose(dset) < 0)
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FAIL_STACK_ERROR;
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if (H5Sclose(space) < 0)
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FAIL_STACK_ERROR;
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if (H5Pclose(dcpl) < 0)
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FAIL_STACK_ERROR;
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PASSED();
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return 0;
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error:
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H5E_BEGIN_TRY
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{
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H5Dclose(dset);
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H5Pclose(dcpl);
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H5Sclose(space);
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}
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H5E_END_TRY
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return 1;
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} /* end test_large_enough_current_eventual() */
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/*-------------------------------------------------------------------------
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* Function: test_large_enough_current_not_eventual
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*
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* Purpose: Test a single external file which is large enough for the
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* current data size but not large enough for the eventual size.
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*
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* Return: Success: 0
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* Failure: 1
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*
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*-------------------------------------------------------------------------
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*/
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static int
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test_large_enough_current_not_eventual(hid_t file)
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{
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hid_t dcpl = H5I_INVALID_HID; /* dataset creation properties */
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hid_t space = H5I_INVALID_HID; /* data space */
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hid_t dset = H5I_INVALID_HID; /* dataset */
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hsize_t cur_size[1] = {100}; /* current data space size */
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hsize_t max_size[1] = {200}; /* maximum data space size */
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TESTING("extendible dataspace, external storage is too small");
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if ((dcpl = H5Pcreate(H5P_DATASET_CREATE)) < 0)
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FAIL_STACK_ERROR;
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if (H5Pset_external(dcpl, "ext1.data", 0, (hsize_t)(max_size[0] * sizeof(int) - 1)) < 0) /* note -1 */
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FAIL_STACK_ERROR;
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if ((space = H5Screate_simple(1, cur_size, max_size)) < 0)
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FAIL_STACK_ERROR;
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H5E_BEGIN_TRY
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{
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dset = H5Dcreate2(file, "dset4", H5T_NATIVE_INT, space, H5P_DEFAULT, dcpl, H5P_DEFAULT);
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}
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H5E_END_TRY
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if (dset >= 0)
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FAIL_PUTS_ERROR(" Small external file succeeded instead of failing.");
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if (H5Sclose(space) < 0)
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FAIL_STACK_ERROR;
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if (H5Pclose(dcpl) < 0)
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FAIL_STACK_ERROR;
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PASSED();
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return 0;
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error:
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H5E_BEGIN_TRY
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{
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H5Dclose(dset);
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H5Pclose(dcpl);
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H5Sclose(space);
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}
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H5E_END_TRY
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return 1;
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} /* end test_large_enough_current_not_eventual() */
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|
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/*-------------------------------------------------------------------------
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* Function: test_unlimited
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*
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* Purpose: Test a single external file of unlimited size and an
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* unlimited data space.
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*
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* Return: Success: 0
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* Failure: 1
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*
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*-------------------------------------------------------------------------
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*/
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static int
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test_unlimited(hid_t file)
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{
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hid_t dcpl = H5I_INVALID_HID; /* dataset creation properties */
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hid_t space = H5I_INVALID_HID; /* data space */
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hid_t dset = H5I_INVALID_HID; /* dataset */
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hsize_t cur_size[1] = {100}; /* data space current size */
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hsize_t max_size[1] = {H5S_UNLIMITED}; /* data space maximum size */
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int n; /* number of external files */
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HDoff_t file_offset; /* external file offset */
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hsize_t file_size; /* sizeof external file segment */
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TESTING("unlimited dataspace, unlimited external storage");
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/* Create dataset */
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if ((dcpl = H5Pcreate(H5P_DATASET_CREATE)) < 0)
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FAIL_STACK_ERROR;
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if (H5Pset_external(dcpl, "ext1.data", 0, H5F_UNLIMITED) < 0)
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FAIL_STACK_ERROR;
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if ((space = H5Screate_simple(1, cur_size, max_size)) < 0)
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FAIL_STACK_ERROR;
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if ((dset = H5Dcreate2(file, "dset5", H5T_NATIVE_INT, space, H5P_DEFAULT, dcpl, H5P_DEFAULT)) < 0)
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FAIL_STACK_ERROR;
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|
|
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if (H5Dclose(dset) < 0)
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FAIL_STACK_ERROR;
|
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if (H5Sclose(space) < 0)
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FAIL_STACK_ERROR;
|
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if (H5Pclose(dcpl) < 0)
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FAIL_STACK_ERROR;
|
|
|
|
/* Read dataset creation information */
|
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if ((dset = H5Dopen2(file, "dset5", H5P_DEFAULT)) < 0)
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FAIL_STACK_ERROR;
|
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if ((dcpl = H5Dget_create_plist(dset)) < 0)
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FAIL_STACK_ERROR;
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if ((n = H5Pget_external_count(dcpl)) < 0)
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FAIL_STACK_ERROR;
|
|
if (1 != n) {
|
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H5_FAILED();
|
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puts(" Returned external count is wrong.");
|
|
printf(" got: %d\n ans: 1\n", n);
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goto error;
|
|
} /* end if */
|
|
|
|
if (H5Pget_external(dcpl, 0, 0, NULL, &file_offset, &file_size) < 0)
|
|
FAIL_STACK_ERROR;
|
|
if (file_offset != 0) {
|
|
H5_FAILED();
|
|
puts(" Wrong file offset.");
|
|
printf(" got: %lu\n ans: 0\n", (unsigned long)file_offset);
|
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goto error;
|
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}
|
|
if (H5F_UNLIMITED != file_size) {
|
|
H5_FAILED();
|
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puts(" Wrong file size.");
|
|
printf(" got: %lu\n ans: INF\n", (unsigned long)file_size);
|
|
goto error;
|
|
}
|
|
|
|
if (H5Pclose(dcpl) < 0)
|
|
FAIL_STACK_ERROR;
|
|
if (H5Dclose(dset) < 0)
|
|
FAIL_STACK_ERROR;
|
|
|
|
PASSED();
|
|
return 0;
|
|
|
|
error:
|
|
H5E_BEGIN_TRY
|
|
{
|
|
H5Dclose(dset);
|
|
H5Pclose(dcpl);
|
|
H5Sclose(space);
|
|
}
|
|
H5E_END_TRY
|
|
return 1;
|
|
} /* end test_unlimited() */
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* Function: __add_external_files
|
|
*
|
|
* Purpose: Add external file names to the DCPL with the given properties.
|
|
* Used in test_multiple_files().
|
|
* Limit to no more than 999 external files.
|
|
*
|
|
* Return: Success: 0
|
|
* Failure: -1
|
|
*
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
static int
|
|
add_external_files(hid_t dcpl_id, unsigned int n_external_files, HDoff_t offset, hsize_t max_ext_size)
|
|
{
|
|
char exname[AEF_EXNAME_MAX_LEN + 1];
|
|
unsigned int i = 0;
|
|
|
|
if (dcpl_id < 0) {
|
|
return -1;
|
|
}
|
|
for (i = 0; i < n_external_files; i++) {
|
|
if (snprintf(exname, AEF_EXNAME_MAX_LEN, "ext%d.data", i + 1) > AEF_EXNAME_MAX_LEN) {
|
|
fprintf(stderr, "External file %d overflows name buffer\n", i + 1);
|
|
fflush(stderr);
|
|
return -1;
|
|
}
|
|
if (H5Pset_external(dcpl_id, exname, offset, max_ext_size) < 0) {
|
|
fprintf(stderr, "Problem adding external file %s\n", exname);
|
|
fflush(stderr);
|
|
return -1;
|
|
}
|
|
}
|
|
return 0;
|
|
} /* end __add_external_files() */
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* Function: test_multiple_files
|
|
*
|
|
* Purpose: Test multiple external files for a dataset.
|
|
*
|
|
* Return: Success: 0
|
|
* Failure: 1
|
|
*
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
static int
|
|
test_multiple_files(hid_t file)
|
|
{
|
|
hid_t dcpl = H5I_INVALID_HID; /* dataset creation properties */
|
|
hid_t space = H5I_INVALID_HID; /* dataspace */
|
|
hid_t dset = H5I_INVALID_HID; /* dataset */
|
|
hsize_t cur_size[1] = {100}; /* data space current size */
|
|
hsize_t max_size[1] = {100}; /* data space maximum size */
|
|
hsize_t max_ext_size; /* maximum size of external files */
|
|
unsigned int n_external_files = 4;
|
|
|
|
TESTING("multiple external files");
|
|
|
|
if ((dcpl = H5Pcreate(H5P_DATASET_CREATE)) < 0)
|
|
FAIL_STACK_ERROR;
|
|
|
|
max_ext_size = (hsize_t)(sizeof(int) * max_size[0] / n_external_files);
|
|
|
|
if (add_external_files(dcpl, n_external_files, 0, max_ext_size) < 0) {
|
|
FAIL_STACK_ERROR;
|
|
}
|
|
|
|
if ((space = H5Screate_simple(1, cur_size, max_size)) < 0)
|
|
FAIL_STACK_ERROR;
|
|
|
|
if ((dset = H5Dcreate2(file, "dset6", H5T_NATIVE_INT, space, H5P_DEFAULT, dcpl, H5P_DEFAULT)) < 0)
|
|
FAIL_STACK_ERROR;
|
|
|
|
if (H5Dclose(dset) < 0)
|
|
FAIL_STACK_ERROR;
|
|
if (H5Pclose(dcpl) < 0)
|
|
FAIL_STACK_ERROR;
|
|
/* Reuse space below */
|
|
|
|
/* ----------------------------------------------
|
|
* Verify that too-small external files will fail
|
|
*/
|
|
if ((dcpl = H5Pcreate(H5P_DATASET_CREATE)) < 0)
|
|
FAIL_STACK_ERROR;
|
|
|
|
max_ext_size -= 1;
|
|
|
|
if (add_external_files(dcpl, n_external_files, 0, max_ext_size) < 0) {
|
|
FAIL_STACK_ERROR;
|
|
}
|
|
|
|
H5E_BEGIN_TRY
|
|
{
|
|
dset = H5Dcreate2(file, "dset7", H5T_NATIVE_INT, space, H5P_DEFAULT, dcpl, H5P_DEFAULT);
|
|
}
|
|
H5E_END_TRY
|
|
if (dset >= 0)
|
|
FAIL_PUTS_ERROR(" Small external files succeeded instead of failing.");
|
|
|
|
if (H5Pclose(dcpl) < 0)
|
|
FAIL_STACK_ERROR;
|
|
if (H5Sclose(space) < 0)
|
|
FAIL_STACK_ERROR;
|
|
|
|
PASSED();
|
|
return 0;
|
|
|
|
error:
|
|
H5E_BEGIN_TRY
|
|
{
|
|
H5Dclose(dset);
|
|
H5Pclose(dcpl);
|
|
H5Sclose(space);
|
|
}
|
|
H5E_END_TRY
|
|
return 1;
|
|
} /* end test_multiple_files() */
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* Function: test_add_to_unlimited
|
|
*
|
|
* Purpose: It should be impossible to define an unlimited external file
|
|
* and then follow it with another external file.
|
|
*
|
|
* Return: Success: 0
|
|
* Failure: 1
|
|
*
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
static int
|
|
test_add_to_unlimited(void)
|
|
{
|
|
hid_t dcpl = H5I_INVALID_HID; /* dataset creation properties */
|
|
herr_t status = FAIL; /* function return status */
|
|
int n = 0; /* number of external files */
|
|
|
|
TESTING("external file following unlimited file");
|
|
|
|
if ((dcpl = H5Pcreate(H5P_DATASET_CREATE)) < 0)
|
|
FAIL_STACK_ERROR;
|
|
if (H5Pset_external(dcpl, "ext1.data", 0, H5F_UNLIMITED) < 0)
|
|
FAIL_STACK_ERROR;
|
|
|
|
H5E_BEGIN_TRY
|
|
{
|
|
status = H5Pset_external(dcpl, "ext2.data", 0, 100);
|
|
}
|
|
H5E_END_TRY
|
|
if (status >= 0)
|
|
FAIL_PUTS_ERROR(" H5Pset_external() succeeded when it should have failed.");
|
|
|
|
if ((n = H5Pget_external_count(dcpl)) < 0)
|
|
FAIL_STACK_ERROR;
|
|
if (1 != n)
|
|
FAIL_PUTS_ERROR(" Wrong external file count returned.");
|
|
|
|
if (H5Pclose(dcpl) < 0)
|
|
FAIL_STACK_ERROR;
|
|
PASSED();
|
|
return 0;
|
|
|
|
error:
|
|
H5E_BEGIN_TRY
|
|
{
|
|
H5Pclose(dcpl);
|
|
}
|
|
H5E_END_TRY
|
|
return 1;
|
|
} /* end test_add_to_unlimited() */
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* Function: test_overflow
|
|
*
|
|
* Purpose: It should be impossible to create a set of external files
|
|
* whose total size overflows a size_t integer.
|
|
*
|
|
* Return: Success: 0
|
|
* Failure: 1
|
|
*
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
static int
|
|
test_overflow(void)
|
|
{
|
|
hid_t dcpl = H5I_INVALID_HID; /* dataset creation properties */
|
|
herr_t status = FAIL; /* return status */
|
|
|
|
TESTING("address overflow in external files");
|
|
|
|
if ((dcpl = H5Pcreate(H5P_DATASET_CREATE)) < 0)
|
|
FAIL_STACK_ERROR;
|
|
if (H5Pset_external(dcpl, "ext1.data", 0, H5F_UNLIMITED - 1) < 0)
|
|
FAIL_STACK_ERROR;
|
|
|
|
H5E_BEGIN_TRY
|
|
{
|
|
status = H5Pset_external(dcpl, "ext2.data", 0, 100);
|
|
}
|
|
H5E_END_TRY
|
|
if (status >= 0)
|
|
FAIL_PUTS_ERROR(" H5Pset_external() succeeded when it should have failed.");
|
|
|
|
if (H5Pclose(dcpl) < 0)
|
|
FAIL_STACK_ERROR;
|
|
|
|
PASSED();
|
|
return 0;
|
|
|
|
error:
|
|
H5E_BEGIN_TRY
|
|
{
|
|
H5Pclose(dcpl);
|
|
}
|
|
H5E_END_TRY
|
|
return 1;
|
|
} /* end test_overflow() */
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* Function: test_read_file_set
|
|
*
|
|
* Purpose: Tests reading from an external file set.
|
|
*
|
|
* Return: Success: 0
|
|
* Failure: 1
|
|
*
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
static int
|
|
test_read_file_set(hid_t fapl)
|
|
{
|
|
hid_t file = H5I_INVALID_HID; /* file to write to */
|
|
hid_t dcpl = H5I_INVALID_HID; /* dataset creation properties */
|
|
hid_t space = H5I_INVALID_HID; /* data space */
|
|
hid_t dset = H5I_INVALID_HID; /* dataset */
|
|
hid_t grp = H5I_INVALID_HID; /* group to emit diagnostics */
|
|
size_t i = 0; /* miscellaneous counter */
|
|
char filename[1024]; /* file names */
|
|
int part[PART_SIZE]; /* raw data buffer (partial) */
|
|
int whole[TOTAL_SIZE]; /* raw data buffer (total) */
|
|
hsize_t cur_size; /* current data space size */
|
|
hid_t hs_space = H5I_INVALID_HID; /* hyperslab data space */
|
|
hsize_t hs_start = 30; /* hyperslab starting offset */
|
|
hsize_t hs_count = 25; /* hyperslab size */
|
|
|
|
TESTING("read external dataset");
|
|
|
|
if (HDsetenv("HDF5_EXTFILE_PREFIX", "", 1) < 0)
|
|
TEST_ERROR;
|
|
|
|
/* Reset the raw data files */
|
|
if (reset_raw_data_files(false) < 0)
|
|
TEST_ERROR;
|
|
|
|
/* Create the file and an initial group. This causes messages about
|
|
* debugging to be emitted before we start playing games with what the
|
|
* output looks like.
|
|
*/
|
|
h5_fixname(EXT_FNAME[1], fapl, filename, sizeof(filename));
|
|
if ((file = H5Fcreate(filename, H5F_ACC_TRUNC, H5P_DEFAULT, fapl)) < 0)
|
|
FAIL_STACK_ERROR;
|
|
if ((grp = H5Gcreate2(file, "emit-diagnostics", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0)
|
|
FAIL_STACK_ERROR;
|
|
if (H5Gclose(grp) < 0)
|
|
FAIL_STACK_ERROR;
|
|
|
|
/* Create the dcpl */
|
|
if ((dcpl = H5Pcreate(H5P_DATASET_CREATE)) < 0)
|
|
FAIL_STACK_ERROR;
|
|
for (i = 0; i < N_EXT_FILES; i++) {
|
|
snprintf(filename, sizeof(filename), "extern_%dr.raw", (int)i + 1);
|
|
if (H5Pset_external(dcpl, filename, (HDoff_t)(i * GARBAGE_PER_FILE), (hsize_t)sizeof(part)) < 0)
|
|
FAIL_STACK_ERROR;
|
|
}
|
|
|
|
/* Create the dataspace */
|
|
cur_size = TOTAL_SIZE;
|
|
if ((space = H5Screate_simple(1, &cur_size, NULL)) < 0)
|
|
FAIL_STACK_ERROR;
|
|
|
|
/* Create the dataset */
|
|
if ((dset = H5Dcreate2(file, "dset1", H5T_NATIVE_INT, space, H5P_DEFAULT, dcpl, H5P_DEFAULT)) < 0)
|
|
FAIL_STACK_ERROR;
|
|
|
|
/* Read the entire dataset */
|
|
memset(whole, 0, sizeof(whole));
|
|
if (H5Dread(dset, H5T_NATIVE_INT, space, space, H5P_DEFAULT, whole) < 0)
|
|
FAIL_STACK_ERROR;
|
|
|
|
/* Compare data */
|
|
for (i = 0; i < TOTAL_SIZE; i++)
|
|
if (whole[i] != (signed)i)
|
|
FAIL_PUTS_ERROR("Incorrect value(s) read.");
|
|
|
|
/* Read via a hypserslab in the middle of the dataset */
|
|
|
|
/* Set up dataspace */
|
|
if ((hs_space = H5Scopy(space)) < 0)
|
|
FAIL_STACK_ERROR;
|
|
if (H5Sselect_hyperslab(hs_space, H5S_SELECT_SET, &hs_start, NULL, &hs_count, NULL) < 0)
|
|
FAIL_STACK_ERROR;
|
|
|
|
/* Read */
|
|
memset(whole, 0, sizeof(whole));
|
|
if (H5Dread(dset, H5T_NATIVE_INT, hs_space, hs_space, H5P_DEFAULT, whole) < 0)
|
|
FAIL_STACK_ERROR;
|
|
|
|
/* Verify data */
|
|
for (i = (size_t)hs_start; i < (size_t)(hs_start + hs_count); i++) {
|
|
if (whole[i] != (signed)i)
|
|
FAIL_PUTS_ERROR("Incorrect value(s) read (hyperslab).");
|
|
} /* end for */
|
|
|
|
if (H5Dclose(dset) < 0)
|
|
FAIL_STACK_ERROR;
|
|
if (H5Pclose(dcpl) < 0)
|
|
FAIL_STACK_ERROR;
|
|
if (H5Sclose(space) < 0)
|
|
FAIL_STACK_ERROR;
|
|
if (H5Sclose(hs_space) < 0)
|
|
FAIL_STACK_ERROR;
|
|
if (H5Fclose(file) < 0)
|
|
FAIL_STACK_ERROR;
|
|
PASSED();
|
|
return 0;
|
|
|
|
error:
|
|
H5E_BEGIN_TRY
|
|
{
|
|
H5Gclose(grp);
|
|
H5Dclose(dset);
|
|
H5Pclose(dcpl);
|
|
H5Sclose(space);
|
|
H5Sclose(hs_space);
|
|
H5Fclose(file);
|
|
}
|
|
H5E_END_TRY
|
|
return 1;
|
|
} /* end test_read_file_set() */
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* Function: test_write_file_set
|
|
*
|
|
* Purpose: Tests writing to an external file set.
|
|
*
|
|
* Return: Success: 0
|
|
* Failure: 1
|
|
*
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
static int
|
|
test_write_file_set(hid_t fapl)
|
|
{
|
|
hid_t file = H5I_INVALID_HID; /* file to which to write */
|
|
hid_t dcpl = H5I_INVALID_HID; /* dataset creation properties */
|
|
hid_t mem_space = H5I_INVALID_HID; /* memory data space */
|
|
hid_t file_space = H5I_INVALID_HID; /* file data space */
|
|
hid_t dset = H5I_INVALID_HID; /* dataset */
|
|
unsigned i = 0; /* miscellaneous counter */
|
|
int part[PART_SIZE]; /* raw data buffer (partial) */
|
|
int whole[TOTAL_SIZE]; /* raw data buffer (total) */
|
|
hsize_t cur_size = 100; /* current data space size */
|
|
hsize_t max_size = 200; /* maximum data space size */
|
|
hsize_t hs_start = 100; /* hyperslab starting offset */
|
|
hsize_t hs_count = 100; /* hyperslab size */
|
|
char filename[1024]; /* file name */
|
|
|
|
TESTING("write external dataset");
|
|
|
|
if (HDsetenv("HDF5_EXTFILE_PREFIX", "", 1) < 0)
|
|
TEST_ERROR;
|
|
|
|
/* Create another file */
|
|
h5_fixname(EXT_FNAME[2], fapl, filename, sizeof(filename));
|
|
if ((file = H5Fcreate(filename, H5F_ACC_TRUNC, H5P_DEFAULT, fapl)) < 0)
|
|
FAIL_STACK_ERROR;
|
|
|
|
/* Create the dcpl and external file list */
|
|
if ((dcpl = H5Pcreate(H5P_DATASET_CREATE)) < 0)
|
|
FAIL_STACK_ERROR;
|
|
for (i = 0; i < N_EXT_FILES; i++) {
|
|
hsize_t size;
|
|
|
|
snprintf(filename, sizeof(filename), "extern_%dw.raw", (int)i + 1);
|
|
|
|
if (i != N_EXT_FILES - 1)
|
|
size = (hsize_t)sizeof(part);
|
|
else
|
|
size = H5F_UNLIMITED;
|
|
|
|
if (H5Pset_external(dcpl, filename, (HDoff_t)(i * GARBAGE_PER_FILE), size) < 0)
|
|
FAIL_STACK_ERROR;
|
|
} /* end for */
|
|
|
|
/* Reset the raw data files */
|
|
if (reset_raw_data_files(false) < 0)
|
|
TEST_ERROR;
|
|
|
|
/* Create the dataset */
|
|
if ((mem_space = H5Screate_simple(1, &cur_size, &max_size)) < 0)
|
|
FAIL_STACK_ERROR;
|
|
if ((file_space = H5Scopy(mem_space)) < 0)
|
|
FAIL_STACK_ERROR;
|
|
if ((dset = H5Dcreate2(file, "dset1", H5T_NATIVE_INT, file_space, H5P_DEFAULT, dcpl, H5P_DEFAULT)) < 0)
|
|
FAIL_STACK_ERROR;
|
|
|
|
/* Write the entire dataset and compare with the original */
|
|
for (i = 0; i < cur_size; i++)
|
|
whole[i] = (int)i;
|
|
if (H5Dwrite(dset, H5T_NATIVE_INT, mem_space, file_space, H5P_DEFAULT, whole) < 0)
|
|
FAIL_STACK_ERROR;
|
|
for (i = 0; i < N_EXT_FILES; i++) {
|
|
char name1[64], name2[64];
|
|
|
|
snprintf(name1, sizeof(name1), "extern_%dr.raw", i + 1);
|
|
snprintf(name2, sizeof(name2), "extern_%dw.raw", i + 1);
|
|
if (!files_have_same_contents(name1, name2))
|
|
FAIL_PUTS_ERROR(" Output differs from expected value.");
|
|
} /* end for */
|
|
|
|
/* Extend the dataset by another 100 elements */
|
|
if (H5Dset_extent(dset, &max_size) < 0)
|
|
FAIL_STACK_ERROR;
|
|
if (H5Sclose(file_space) < 0)
|
|
FAIL_STACK_ERROR;
|
|
if ((file_space = H5Dget_space(dset)) < 0)
|
|
FAIL_STACK_ERROR;
|
|
|
|
/* Write second half of dataset */
|
|
for (i = 0; i < hs_count; i++)
|
|
whole[i] = 100 + (int)i;
|
|
if (H5Sselect_hyperslab(file_space, H5S_SELECT_SET, &hs_start, NULL, &hs_count, NULL) < 0)
|
|
FAIL_STACK_ERROR;
|
|
if (H5Dwrite(dset, H5T_NATIVE_INT, mem_space, file_space, H5P_DEFAULT, whole) < 0)
|
|
FAIL_STACK_ERROR;
|
|
|
|
if (H5Dclose(dset) < 0)
|
|
FAIL_STACK_ERROR;
|
|
if (H5Pclose(dcpl) < 0)
|
|
FAIL_STACK_ERROR;
|
|
if (H5Sclose(mem_space) < 0)
|
|
FAIL_STACK_ERROR;
|
|
if (H5Sclose(file_space) < 0)
|
|
FAIL_STACK_ERROR;
|
|
if (H5Fclose(file) < 0)
|
|
FAIL_STACK_ERROR;
|
|
|
|
PASSED();
|
|
return 0;
|
|
|
|
error:
|
|
H5E_BEGIN_TRY
|
|
{
|
|
H5Dclose(dset);
|
|
H5Pclose(dcpl);
|
|
H5Sclose(mem_space);
|
|
H5Sclose(file_space);
|
|
H5Fclose(file);
|
|
}
|
|
H5E_END_TRY
|
|
return 1;
|
|
} /* end test_write_file_set() */
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* Function: test_path_absolute
|
|
*
|
|
* Purpose: Test absolute filenames for external files.
|
|
* This will create an HDF5 file in a subdirectory which will
|
|
* refer to /full/path/extern_*a.raw on unix and to
|
|
* c:\full\path\extern_*a.raw and \full\path\extern_*a.raw on
|
|
* windows.
|
|
*
|
|
* Return: Success: 0
|
|
* Failure: 1
|
|
*
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
static int
|
|
test_path_absolute(hid_t fapl)
|
|
{
|
|
hid_t file = H5I_INVALID_HID; /* file to write to */
|
|
hid_t dcpl = H5I_INVALID_HID; /* dataset creation properties */
|
|
hid_t space = H5I_INVALID_HID; /* data space */
|
|
hid_t dset = H5I_INVALID_HID; /* dataset */
|
|
size_t i = 0; /* miscellaneous counter */
|
|
char cwdpath[1024]; /* working directory */
|
|
char filename[1088]; /* file name */
|
|
int part[PART_SIZE]; /* raw data buffer (partial) */
|
|
int whole[TOTAL_SIZE]; /* raw data buffer (total) */
|
|
hsize_t cur_size; /* current data space size */
|
|
|
|
TESTING("absolute filenames for external file");
|
|
|
|
h5_fixname(EXT_FNAME[3], fapl, filename, sizeof(filename));
|
|
if ((file = H5Fcreate(filename, H5F_ACC_TRUNC, H5P_DEFAULT, fapl)) < 0)
|
|
FAIL_STACK_ERROR;
|
|
|
|
/* Reset the raw data files */
|
|
if (reset_raw_data_files(false) < 0)
|
|
TEST_ERROR;
|
|
|
|
/* Create the dcpl */
|
|
if ((dcpl = H5Pcreate(H5P_DATASET_CREATE)) < 0)
|
|
FAIL_STACK_ERROR;
|
|
if (NULL == HDgetcwd(cwdpath, sizeof(cwdpath)))
|
|
TEST_ERROR;
|
|
for (i = 0; i < N_EXT_FILES; i++) {
|
|
snprintf(filename, sizeof(filename), "%s%sextern_%zur.raw", cwdpath, H5_DIR_SEPS, i + 1);
|
|
#if defined(H5_HAVE_WINDOW_PATH)
|
|
/* For windows, test path-absolute case (\dir\file.raw) for the second file */
|
|
if (i == 1)
|
|
snprintf(filename, sizeof(filename), "%s%sextern_%zur.raw", cwdpath + 2, H5_DIR_SEPS, i + 1);
|
|
#endif
|
|
if (H5Pset_external(dcpl, filename, (HDoff_t)(i * GARBAGE_PER_FILE), (hsize_t)sizeof(part)) < 0)
|
|
FAIL_STACK_ERROR;
|
|
}
|
|
|
|
/* create the dataspace */
|
|
cur_size = TOTAL_SIZE;
|
|
if ((space = H5Screate_simple(1, &cur_size, NULL)) < 0)
|
|
FAIL_STACK_ERROR;
|
|
|
|
/* create the dataset */
|
|
if ((dset = H5Dcreate2(file, "dset1", H5T_NATIVE_INT, space, H5P_DEFAULT, dcpl, H5P_DEFAULT)) < 0)
|
|
FAIL_STACK_ERROR;
|
|
|
|
/* Read the entire dataset and compare with the original */
|
|
memset(whole, 0, sizeof(whole));
|
|
if (H5Dread(dset, H5T_NATIVE_INT, space, space, H5P_DEFAULT, whole) < 0)
|
|
FAIL_STACK_ERROR;
|
|
for (i = 0; i < TOTAL_SIZE; i++)
|
|
if (whole[i] != (signed)i)
|
|
FAIL_PUTS_ERROR("Incorrect value(s) read.");
|
|
|
|
if (H5Dclose(dset) < 0)
|
|
FAIL_STACK_ERROR;
|
|
if (H5Sclose(space) < 0)
|
|
FAIL_STACK_ERROR;
|
|
if (H5Pclose(dcpl) < 0)
|
|
FAIL_STACK_ERROR;
|
|
if (H5Fclose(file) < 0)
|
|
FAIL_STACK_ERROR;
|
|
PASSED();
|
|
return 0;
|
|
|
|
error:
|
|
H5E_BEGIN_TRY
|
|
{
|
|
H5Dclose(dset);
|
|
H5Sclose(space);
|
|
H5Pclose(dcpl);
|
|
H5Fclose(file);
|
|
}
|
|
H5E_END_TRY
|
|
return 1;
|
|
} /* end test_path_absolute() */
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* Function: test_path_relative
|
|
*
|
|
* Purpose: Test external files with filename relative to current directory.
|
|
* This will create an HDF5 file in a subdirectory which will
|
|
* refer to extern_*a.raw
|
|
*
|
|
* Return: Success: 0
|
|
* Failure: 1
|
|
*
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
static int
|
|
test_path_relative(hid_t fapl)
|
|
{
|
|
hid_t file = H5I_INVALID_HID; /* file to write to */
|
|
hid_t dcpl = H5I_INVALID_HID; /* dataset creation properties */
|
|
hid_t space = H5I_INVALID_HID; /* data space */
|
|
hid_t dset = H5I_INVALID_HID; /* dataset */
|
|
size_t i = 0; /* miscellaneous counters */
|
|
char filename[1024]; /* file name */
|
|
int part[PART_SIZE]; /* raw data buffer (partial) */
|
|
int whole[TOTAL_SIZE]; /* raw data buffer (total) */
|
|
hsize_t cur_size; /* current data space size */
|
|
|
|
TESTING("filenames relative to current directory for external file");
|
|
|
|
if (HDsetenv("HDF5_EXTFILE_PREFIX", "", 1) < 0)
|
|
TEST_ERROR;
|
|
|
|
if (HDmkdir("extern_dir", (mode_t)0755) < 0 && errno != EEXIST)
|
|
TEST_ERROR;
|
|
|
|
h5_fixname(EXT_FNAME[4], fapl, filename, sizeof(filename));
|
|
if ((file = H5Fcreate(filename, H5F_ACC_TRUNC, H5P_DEFAULT, fapl)) < 0)
|
|
FAIL_STACK_ERROR;
|
|
|
|
/* Reset the raw data files */
|
|
if (reset_raw_data_files(false) < 0)
|
|
TEST_ERROR;
|
|
|
|
/* Create the dataset */
|
|
if ((dcpl = H5Pcreate(H5P_DATASET_CREATE)) < 0)
|
|
FAIL_STACK_ERROR;
|
|
for (i = 0; i < N_EXT_FILES; i++) {
|
|
snprintf(filename, sizeof(filename), "extern_%dr.raw", (int)i + 1);
|
|
if (H5Pset_external(dcpl, filename, (HDoff_t)(i * GARBAGE_PER_FILE), (hsize_t)sizeof(part)) < 0)
|
|
FAIL_STACK_ERROR;
|
|
}
|
|
|
|
cur_size = TOTAL_SIZE;
|
|
if ((space = H5Screate_simple(1, &cur_size, NULL)) < 0)
|
|
FAIL_STACK_ERROR;
|
|
if ((dset = H5Dcreate2(file, "dset1", H5T_NATIVE_INT, space, H5P_DEFAULT, dcpl, H5P_DEFAULT)) < 0)
|
|
FAIL_STACK_ERROR;
|
|
|
|
/* Read the entire dataset and compare with the original */
|
|
memset(whole, 0, sizeof(whole));
|
|
if (H5Dread(dset, H5T_NATIVE_INT, space, space, H5P_DEFAULT, whole) < 0)
|
|
FAIL_STACK_ERROR;
|
|
for (i = 0; i < TOTAL_SIZE; i++)
|
|
if (whole[i] != (signed)i)
|
|
FAIL_PUTS_ERROR("Incorrect value(s) read.");
|
|
|
|
if (H5Dclose(dset) < 0)
|
|
FAIL_STACK_ERROR;
|
|
if (H5Pclose(dcpl) < 0)
|
|
FAIL_STACK_ERROR;
|
|
if (H5Sclose(space) < 0)
|
|
FAIL_STACK_ERROR;
|
|
if (H5Fclose(file) < 0)
|
|
FAIL_STACK_ERROR;
|
|
PASSED();
|
|
return 0;
|
|
|
|
error:
|
|
H5E_BEGIN_TRY
|
|
{
|
|
H5Dclose(dset);
|
|
H5Pclose(dcpl);
|
|
H5Sclose(space);
|
|
H5Fclose(file);
|
|
}
|
|
H5E_END_TRY
|
|
return 1;
|
|
} /* end test_path_relative() */
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* Function: test_path_relative_cwd
|
|
*
|
|
* Purpose: Test external files with filename relative to current directory.
|
|
* This will create an HDF5 file in a subdirectory which will
|
|
* refer to ../extern_*a.raw
|
|
* The files are then accessed by setting the efile_prefix dataset
|
|
* access property to "${ORIGIN}".
|
|
*
|
|
* Return: Success: 0
|
|
* Failure: 1
|
|
*
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
static int
|
|
test_path_relative_cwd(hid_t fapl)
|
|
{
|
|
hid_t file = H5I_INVALID_HID; /* file to write to */
|
|
hid_t dcpl = H5I_INVALID_HID; /* dataset creation properties */
|
|
hid_t space = H5I_INVALID_HID; /* data space */
|
|
hid_t dapl = H5I_INVALID_HID; /* dataset access property list */
|
|
hid_t dapl2 = H5I_INVALID_HID; /* copy of dapl */
|
|
hid_t dset = H5I_INVALID_HID; /* dataset */
|
|
hid_t dset2 = H5I_INVALID_HID; /* dataset, opened a second time */
|
|
hid_t dset3 = H5I_INVALID_HID; /* dataset, opened with different prefix */
|
|
size_t i = 0; /* miscellaneous counters */
|
|
char filename[1024]; /* file name */
|
|
int part[PART_SIZE]; /* raw data buffer (partial) */
|
|
int whole[TOTAL_SIZE]; /* raw data buffer (total) */
|
|
hsize_t cur_size; /* current data space size */
|
|
char buffer[1024]; /* buffer to read efile_prefix */
|
|
|
|
TESTING("filenames relative to HDF5 file for external file");
|
|
|
|
if (HDsetenv("HDF5_EXTFILE_PREFIX", "", 1) < 0)
|
|
TEST_ERROR;
|
|
|
|
if (HDmkdir("extern_dir", (mode_t)0755) < 0 && errno != EEXIST)
|
|
TEST_ERROR;
|
|
|
|
h5_fixname(EXT_FNAME[4], fapl, filename, sizeof(filename));
|
|
if ((file = H5Fcreate(filename, H5F_ACC_TRUNC, H5P_DEFAULT, fapl)) < 0)
|
|
FAIL_STACK_ERROR;
|
|
|
|
/* Reset the raw data files */
|
|
if (reset_raw_data_files(false) < 0)
|
|
TEST_ERROR;
|
|
|
|
/* Create the dataset */
|
|
if ((dcpl = H5Pcreate(H5P_DATASET_CREATE)) < 0)
|
|
FAIL_STACK_ERROR;
|
|
for (i = 0; i < N_EXT_FILES; i++) {
|
|
snprintf(filename, sizeof(filename), "..%sextern_%dr.raw", H5_DIR_SEPS, (int)i + 1);
|
|
if (H5Pset_external(dcpl, filename, (HDoff_t)(i * GARBAGE_PER_FILE), (hsize_t)sizeof(part)) < 0)
|
|
FAIL_STACK_ERROR;
|
|
}
|
|
|
|
cur_size = TOTAL_SIZE;
|
|
if ((space = H5Screate_simple(1, &cur_size, NULL)) < 0)
|
|
FAIL_STACK_ERROR;
|
|
if ((dapl = H5Pcreate(H5P_DATASET_ACCESS)) < 0)
|
|
FAIL_STACK_ERROR;
|
|
if (H5Pset_efile_prefix(dapl, "${ORIGIN}") < 0)
|
|
FAIL_STACK_ERROR;
|
|
if (H5Pget_efile_prefix(dapl, buffer, sizeof(buffer)) < 0)
|
|
FAIL_STACK_ERROR;
|
|
if (strcmp(buffer, "${ORIGIN}") != 0)
|
|
FAIL_PUTS_ERROR("efile prefix not set correctly");
|
|
if ((dapl2 = H5Pcopy(dapl)) < 0)
|
|
FAIL_STACK_ERROR;
|
|
|
|
/* Create dataset */
|
|
if ((dset = H5Dcreate2(file, "dset1", H5T_NATIVE_INT, space, H5P_DEFAULT, dcpl, dapl2)) < 0)
|
|
FAIL_STACK_ERROR;
|
|
|
|
/* Reopen dataset with same efile_prefix property */
|
|
if ((dset2 = H5Dopen2(file, "dset1", dapl2)) < 0)
|
|
FAIL_STACK_ERROR;
|
|
|
|
/* Reopen dataset with different efile_prefix property */
|
|
if (H5Pset_efile_prefix(dapl, "//") < 0)
|
|
FAIL_STACK_ERROR;
|
|
H5E_BEGIN_TRY
|
|
{
|
|
dset3 = H5Dopen2(file, "dset1", dapl);
|
|
}
|
|
H5E_END_TRY
|
|
if (dset3 >= 0)
|
|
FAIL_PUTS_ERROR("reopening the dataset with a different efile_prefix succeeded");
|
|
|
|
/* Read the entire dataset and compare with the original */
|
|
memset(whole, 0, sizeof(whole));
|
|
if (H5Dread(dset, H5T_NATIVE_INT, space, space, H5P_DEFAULT, whole) < 0)
|
|
FAIL_STACK_ERROR;
|
|
for (i = 0; i < TOTAL_SIZE; i++)
|
|
if (whole[i] != (signed)i)
|
|
FAIL_PUTS_ERROR("Incorrect value(s) read.");
|
|
|
|
/* Close dataset */
|
|
if (H5Dclose(dset2) < 0)
|
|
FAIL_STACK_ERROR;
|
|
if (H5Dclose(dset) < 0)
|
|
FAIL_STACK_ERROR;
|
|
|
|
/* Open dataset (use a different prefix than for create.
|
|
* This works because the dataset was closed.
|
|
*/
|
|
if (H5Pset_efile_prefix(dapl2, "${ORIGIN}/.") < 0)
|
|
FAIL_STACK_ERROR;
|
|
if ((dset = H5Dopen2(file, "dset1", dapl2)) < 0)
|
|
FAIL_STACK_ERROR;
|
|
|
|
/* Reopen dataset with same efile_prefix property */
|
|
if ((dset2 = H5Dopen2(file, "dset1", dapl2)) < 0)
|
|
FAIL_STACK_ERROR;
|
|
|
|
/* Reopen dataset with different efile_prefix property */
|
|
if (H5Pset_efile_prefix(dapl, NULL) < 0)
|
|
FAIL_STACK_ERROR;
|
|
H5E_BEGIN_TRY
|
|
{
|
|
dset3 = H5Dopen2(file, "dset1", dapl);
|
|
}
|
|
H5E_END_TRY
|
|
if (dset3 >= 0)
|
|
FAIL_PUTS_ERROR("reopening the dataset with a different efile_prefix succeeded");
|
|
|
|
/* Read the entire dataset and compare with the original */
|
|
memset(whole, 0, sizeof(whole));
|
|
if (H5Dread(dset, H5T_NATIVE_INT, space, space, H5P_DEFAULT, whole) < 0)
|
|
FAIL_STACK_ERROR;
|
|
for (i = 0; i < TOTAL_SIZE; i++)
|
|
if (whole[i] != (signed)i)
|
|
FAIL_PUTS_ERROR("Incorrect value(s) read.");
|
|
|
|
if (H5Dclose(dset2) < 0)
|
|
FAIL_STACK_ERROR;
|
|
if (H5Dclose(dset) < 0)
|
|
FAIL_STACK_ERROR;
|
|
if (H5Pclose(dapl2) < 0)
|
|
FAIL_STACK_ERROR;
|
|
if (H5Pclose(dapl) < 0)
|
|
FAIL_STACK_ERROR;
|
|
if (H5Pclose(dcpl) < 0)
|
|
FAIL_STACK_ERROR;
|
|
if (H5Sclose(space) < 0)
|
|
FAIL_STACK_ERROR;
|
|
if (H5Fclose(file) < 0)
|
|
FAIL_STACK_ERROR;
|
|
PASSED();
|
|
return 0;
|
|
|
|
error:
|
|
H5E_BEGIN_TRY
|
|
{
|
|
H5Pclose(dapl2);
|
|
H5Pclose(dapl);
|
|
H5Dclose(dset3);
|
|
H5Dclose(dset2);
|
|
H5Dclose(dset);
|
|
H5Pclose(dcpl);
|
|
H5Sclose(space);
|
|
H5Fclose(file);
|
|
}
|
|
H5E_END_TRY
|
|
return 1;
|
|
} /* end test_path_relative_cwd() */
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* Function: test_h5d_get_access_plist
|
|
*
|
|
* Purpose: Ensure that H5Dget_access_plist returns correct values.
|
|
*
|
|
* Return: Success: 0
|
|
* Failure: 1
|
|
*
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
static int
|
|
test_h5d_get_access_plist(hid_t fapl_id)
|
|
{
|
|
hid_t fid = H5I_INVALID_HID; /* file to write to */
|
|
hid_t dcpl_id = H5I_INVALID_HID; /* dataset creation properties */
|
|
hid_t dapl_id = H5I_INVALID_HID; /* dataset access properties */
|
|
hid_t sid = H5I_INVALID_HID; /* data space */
|
|
hid_t did = H5I_INVALID_HID; /* dataset */
|
|
hsize_t dims = 0; /* dataset size */
|
|
char *buffer = NULL; /* saved prefix name from dapl */
|
|
char filename[1024]; /* file names */
|
|
|
|
TESTING("H5Dget_access_plist() returns correct prefix");
|
|
|
|
if (HDsetenv("HDF5_EXTFILE_PREFIX", "", 1) < 0)
|
|
TEST_ERROR;
|
|
|
|
/* Reset the raw data files */
|
|
if (reset_raw_data_files(false) < 0)
|
|
TEST_ERROR;
|
|
|
|
/* Create the file */
|
|
h5_fixname(EXT_FNAME[5], fapl_id, filename, sizeof(filename));
|
|
if ((fid = H5Fcreate(filename, H5F_ACC_TRUNC, H5P_DEFAULT, fapl_id)) < 0)
|
|
FAIL_STACK_ERROR;
|
|
|
|
/* Create the dcpl and set external storage */
|
|
if ((dcpl_id = H5Pcreate(H5P_DATASET_CREATE)) < 0)
|
|
FAIL_STACK_ERROR;
|
|
if (H5Pset_external(dcpl_id, "extern_1r.raw", 0, 0) < 0)
|
|
FAIL_STACK_ERROR;
|
|
|
|
/* Create the dapl and set the prefix */
|
|
if ((dapl_id = H5Pcreate(H5P_DATASET_ACCESS)) < 0)
|
|
FAIL_STACK_ERROR;
|
|
if (H5Pset_efile_prefix(dapl_id, "someprefix") < 0)
|
|
FAIL_STACK_ERROR;
|
|
|
|
/* Create the dataset */
|
|
if ((sid = H5Screate_simple(1, &dims, NULL)) < 0)
|
|
FAIL_STACK_ERROR;
|
|
if ((did = H5Dcreate2(fid, "dset1", H5T_NATIVE_INT, sid, H5P_DEFAULT, dcpl_id, dapl_id)) < 0)
|
|
FAIL_STACK_ERROR;
|
|
|
|
/* Close the dapl */
|
|
if (H5Pclose(dapl_id) < 0)
|
|
FAIL_STACK_ERROR;
|
|
dapl_id = -1;
|
|
|
|
/* Get a data access property list from the dataset */
|
|
if ((dapl_id = H5Dget_access_plist(did)) < 0)
|
|
FAIL_STACK_ERROR;
|
|
|
|
/* Check the value for the external prefix */
|
|
if ((buffer = (char *)calloc((size_t)64, sizeof(char))) == NULL)
|
|
TEST_ERROR;
|
|
if (H5Pget_efile_prefix(dapl_id, buffer, (size_t)64) < 0)
|
|
FAIL_STACK_ERROR;
|
|
if (strcmp(buffer, "someprefix") != 0)
|
|
FAIL_PUTS_ERROR("external file prefix from dapl incorrect");
|
|
|
|
/* Close everything */
|
|
free(buffer);
|
|
if (H5Sclose(sid) < 0)
|
|
FAIL_STACK_ERROR;
|
|
if (H5Dclose(did) < 0)
|
|
FAIL_STACK_ERROR;
|
|
if (H5Pclose(dcpl_id) < 0)
|
|
FAIL_STACK_ERROR;
|
|
if (H5Pclose(dapl_id) < 0)
|
|
FAIL_STACK_ERROR;
|
|
if (H5Fclose(fid) < 0)
|
|
FAIL_STACK_ERROR;
|
|
|
|
PASSED();
|
|
return 0;
|
|
|
|
error:
|
|
if (buffer)
|
|
free(buffer);
|
|
H5E_BEGIN_TRY
|
|
{
|
|
H5Dclose(did);
|
|
H5Pclose(dcpl_id);
|
|
H5Pclose(dapl_id);
|
|
H5Sclose(sid);
|
|
H5Fclose(fid);
|
|
}
|
|
H5E_END_TRY
|
|
return 1;
|
|
} /* end test_h5d_get_access_plist() */
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* Function: main
|
|
*
|
|
* Purpose: Runs external dataset tests.
|
|
*
|
|
* Return: EXIT_SUCCESS/EXIT_FAILURE
|
|
*
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
int
|
|
main(void)
|
|
{
|
|
hid_t fapl_id_old = H5I_INVALID_HID; /* file access properties (old format) */
|
|
hid_t fapl_id_new = H5I_INVALID_HID; /* file access properties (new format) */
|
|
hid_t fid = H5I_INVALID_HID; /* file for test_1* functions */
|
|
hid_t gid = H5I_INVALID_HID; /* group to emit diagnostics */
|
|
char filename[1024]; /* file name for test_1* funcs */
|
|
unsigned latest_format; /* default or latest file format */
|
|
int nerrors = 0; /* number of errors */
|
|
|
|
h5_test_init();
|
|
|
|
/* Get a fapl for the old (default) file format */
|
|
fapl_id_old = h5_fileaccess();
|
|
h5_fixname(EXT_FNAME[0], fapl_id_old, filename, sizeof(filename));
|
|
|
|
/* Copy and set up a fapl for the latest file format */
|
|
if ((fapl_id_new = H5Pcopy(fapl_id_old)) < 0)
|
|
FAIL_STACK_ERROR;
|
|
if (H5Pset_libver_bounds(fapl_id_new, H5F_LIBVER_LATEST, H5F_LIBVER_LATEST) < 0)
|
|
FAIL_STACK_ERROR;
|
|
|
|
/* The file format doesn't matter for this test */
|
|
nerrors += test_h5d_get_access_plist(fapl_id_new);
|
|
puts("");
|
|
|
|
/* Test with old & new format groups */
|
|
for (latest_format = false; latest_format <= true; latest_format++) {
|
|
hid_t current_fapl_id = H5I_INVALID_HID;
|
|
|
|
/* Set the fapl for different file formats */
|
|
if (latest_format) {
|
|
puts("\nTesting with the latest file format:");
|
|
current_fapl_id = fapl_id_new;
|
|
}
|
|
else {
|
|
puts("Testing with the default file format:");
|
|
current_fapl_id = fapl_id_old;
|
|
}
|
|
|
|
/* Create the common file used by some of the tests */
|
|
if ((fid = H5Fcreate(filename, H5F_ACC_TRUNC, H5P_DEFAULT, current_fapl_id)) < 0)
|
|
FAIL_STACK_ERROR;
|
|
|
|
/* Create a group that will be used in the file set read test */
|
|
if ((gid = H5Gcreate2(fid, "emit-diagnostics", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0)
|
|
FAIL_STACK_ERROR;
|
|
if (H5Gclose(gid) < 0)
|
|
FAIL_STACK_ERROR;
|
|
|
|
/* These tests use a common file */
|
|
nerrors += test_non_extendible(fid);
|
|
nerrors += test_too_small(fid);
|
|
nerrors += test_large_enough_current_eventual(fid);
|
|
nerrors += test_large_enough_current_not_eventual(fid);
|
|
nerrors += test_unlimited(fid);
|
|
nerrors += test_multiple_files(fid);
|
|
|
|
/* These tests use no file */
|
|
nerrors += test_add_to_unlimited();
|
|
nerrors += test_overflow();
|
|
|
|
/* These file set tests use the VFD-aware fapl */
|
|
nerrors += test_read_file_set(current_fapl_id);
|
|
nerrors += test_write_file_set(current_fapl_id);
|
|
nerrors += test_path_absolute(current_fapl_id);
|
|
nerrors += test_path_relative(current_fapl_id);
|
|
nerrors += test_path_relative_cwd(current_fapl_id);
|
|
|
|
/* Verify symbol table messages are cached */
|
|
nerrors += (h5_verify_cached_stabs(EXT_FNAME, current_fapl_id) < 0 ? 1 : 0);
|
|
|
|
/* Close the common file */
|
|
if (H5Fclose(fid) < 0)
|
|
FAIL_STACK_ERROR;
|
|
|
|
} /* end for old and new format */
|
|
|
|
if (nerrors > 0)
|
|
goto error;
|
|
|
|
/* Close the new ff fapl. h5_cleanup will take care of the old ff fapl */
|
|
if (H5Pclose(fapl_id_new) < 0)
|
|
FAIL_STACK_ERROR;
|
|
|
|
puts("All external storage tests passed.");
|
|
|
|
/* Clean up files used by file set tests */
|
|
if (h5_cleanup(EXT_FNAME, fapl_id_old)) {
|
|
HDremove("extern_1r.raw");
|
|
HDremove("extern_2r.raw");
|
|
HDremove("extern_3r.raw");
|
|
HDremove("extern_4r.raw");
|
|
|
|
HDremove("extern_1w.raw");
|
|
HDremove("extern_2w.raw");
|
|
HDremove("extern_3w.raw");
|
|
HDremove("extern_4w.raw");
|
|
|
|
HDrmdir("extern_dir");
|
|
}
|
|
|
|
return EXIT_SUCCESS;
|
|
|
|
error:
|
|
H5E_BEGIN_TRY
|
|
{
|
|
H5Fclose(fid);
|
|
H5Pclose(fapl_id_old);
|
|
H5Pclose(fapl_id_new);
|
|
H5Gclose(gid);
|
|
}
|
|
H5E_END_TRY
|
|
nerrors = MAX(1, nerrors);
|
|
printf("%d TEST%s FAILED.\n", nerrors, 1 == nerrors ? "" : "s");
|
|
return EXIT_FAILURE;
|
|
} /* end main() */
|