mirror of
https://github.com/HDFGroup/hdf5.git
synced 2024-11-27 02:10:55 +08:00
d9e5ca72f3
Add H5Dcreate to API versioned routines, replacing internal usage with H5Dcreate2 Fix thread-safe error stack initialization for API versioned error stack printing routines. Tested on: FreeBSD/32 6.2 (duty) in debug mode FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe, in debug mode Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN, in production mode Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN, in production mode Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN, w/szip filter, in production mode Mac OS X/32 10.4.10 (amazon) in debug mode
209 lines
6.3 KiB
C
209 lines
6.3 KiB
C
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
|
|
* Copyright by The HDF Group. *
|
|
* Copyright by the Board of Trustees of the University of Illinois. *
|
|
* All rights reserved. *
|
|
* *
|
|
* This file is part of HDF5. The full HDF5 copyright notice, including *
|
|
* terms governing use, modification, and redistribution, is contained in *
|
|
* the files COPYING and Copyright.html. COPYING can be found at the root *
|
|
* of the source code distribution tree; Copyright.html can be found at the *
|
|
* root level of an installed copy of the electronic HDF5 document set and *
|
|
* is linked from the top-level documents page. It can also be found at *
|
|
* http://hdfgroup.org/HDF5/doc/Copyright.html. If you do not have *
|
|
* access to either file, you may request a copy from help@hdfgroup.org. *
|
|
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
|
|
|
|
/*
|
|
* Programmer: Leon Arber <larber@uiuc.edu>
|
|
* Sept. 28, 2006.
|
|
*
|
|
* Purpose: This is the first half of a two-part test that makes sure
|
|
* that a file can be read after a parallel application crashes as long
|
|
* as the file was flushed first. We simulate a crash by
|
|
* calling _exit(0) since this doesn't flush HDF5 caches but
|
|
* still exits with success.
|
|
*/
|
|
#include <mpi.h>
|
|
#include "h5test.h"
|
|
|
|
const char *FILENAME[] = {
|
|
"flush",
|
|
"noflush",
|
|
NULL
|
|
};
|
|
|
|
static double the_data[100][100];
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* Function: create_file
|
|
*
|
|
* Purpose: Creates file used in part 1 of the test
|
|
*
|
|
* Return: Success: 0
|
|
*
|
|
* Failure: 1
|
|
*
|
|
* Programmer: Leon Arber
|
|
* Sept. 26, 2006
|
|
*
|
|
* Modifications:
|
|
*
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
hid_t create_file(char* name, hid_t fapl)
|
|
{
|
|
hid_t file, dcpl, space, dset, groups, grp, plist;
|
|
hsize_t ds_size[2] = {100, 100};
|
|
hsize_t ch_size[2] = {5, 5};
|
|
hsize_t i, j;
|
|
|
|
|
|
|
|
if((file=H5Fcreate(name, H5F_ACC_TRUNC, H5P_DEFAULT, fapl)) < 0) goto error;
|
|
|
|
/* Create a chunked dataset */
|
|
if((dcpl = H5Pcreate(H5P_DATASET_CREATE)) < 0) goto error;
|
|
if(H5Pset_chunk(dcpl, 2, ch_size) < 0) goto error;
|
|
if((space = H5Screate_simple(2, ds_size, NULL)) < 0) goto error;
|
|
if((dset = H5Dcreate2(file, "dset", H5T_NATIVE_FLOAT, space, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0)
|
|
goto error;
|
|
|
|
plist = H5Pcreate(H5P_DATASET_XFER);
|
|
H5Pset_dxpl_mpio(plist, H5FD_MPIO_COLLECTIVE);
|
|
|
|
|
|
/* Write some data */
|
|
for(i = 0; i < ds_size[0]; i++) {
|
|
/*
|
|
* The extra cast in the following statement is a bug workaround
|
|
* for the Win32 version 5.0 compiler.
|
|
* 1998-11-06 ptl
|
|
*/
|
|
for(j = 0; j < ds_size[1]; j++)
|
|
the_data[i][j] = (double)(hssize_t)i/(hssize_t)(j+1);
|
|
}
|
|
if(H5Dwrite(dset, H5T_NATIVE_DOUBLE, space, space, plist, the_data) < 0) goto error;
|
|
|
|
/* Create some groups */
|
|
if((groups = H5Gcreate2(file, "some_groups", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) goto error;
|
|
for(i = 0; i < 100; i++) {
|
|
sprintf(name, "grp%02u", (unsigned)i);
|
|
if((grp = H5Gcreate2(groups, name, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) goto error;
|
|
if(H5Gclose(grp) < 0) goto error;
|
|
}
|
|
|
|
return file;
|
|
|
|
error:
|
|
HD_exit(1);
|
|
}
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* Function: main
|
|
*
|
|
* Purpose: Part 1 of a two-part H5Fflush() test.
|
|
*
|
|
* Return: Success: 0
|
|
*
|
|
* Failure: 1
|
|
*
|
|
* Programmer: Robb Matzke
|
|
* Friday, October 23, 1998
|
|
*
|
|
* Modifications:
|
|
* Leon Arber
|
|
* Sept. 26, 2006, expand test to check for failure if H5Fflush is not called.
|
|
*
|
|
*
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
int
|
|
main(int argc, char* argv[])
|
|
{
|
|
hid_t file1, file2, fapl;
|
|
MPI_File mpifh=-2;
|
|
int *mpifh_p = NULL;
|
|
char name[1024];
|
|
const char *envval = NULL;
|
|
int mpi_size, mpi_rank;
|
|
MPI_Comm comm = MPI_COMM_WORLD;
|
|
MPI_Info info = MPI_INFO_NULL;
|
|
|
|
MPI_Init(&argc, &argv);
|
|
MPI_Comm_size(comm, &mpi_size);
|
|
MPI_Comm_rank(comm, &mpi_rank);
|
|
|
|
fapl = H5Pcreate(H5P_FILE_ACCESS);
|
|
H5Pset_fapl_mpio(fapl, comm, info);
|
|
|
|
if(mpi_rank == 0)
|
|
TESTING("H5Fflush (part1)");
|
|
envval = HDgetenv("HDF5_DRIVER");
|
|
if(envval == NULL)
|
|
envval = "nomatch";
|
|
if(HDstrcmp(envval, "split")) {
|
|
/* Create the file */
|
|
h5_fixname(FILENAME[0], fapl, name, sizeof name);
|
|
file1 = create_file(name, fapl);
|
|
/* Flush and exit without closing the library */
|
|
if(H5Fflush(file1, H5F_SCOPE_GLOBAL) < 0) goto error;
|
|
|
|
/* Create the other file which will not be flushed */
|
|
h5_fixname(FILENAME[1], fapl, name, sizeof name);
|
|
file2 = create_file(name, fapl);
|
|
|
|
|
|
if(mpi_rank == 0)
|
|
PASSED();
|
|
fflush(stdout);
|
|
fflush(stderr);
|
|
}
|
|
else
|
|
{
|
|
SKIPPED();
|
|
puts(" Test not compatible with current Virtual File Driver");
|
|
}
|
|
|
|
/*
|
|
* Some systems like Linux with mpich, if you just _exit without MPI_Finalize
|
|
* called, it would terminate but left the launching process waiting forever.
|
|
* OTHO, some systems like AIX do not like files not closed when MPI_Finalize
|
|
* is called. So, we need to get the MPI file handles, close them by hand,
|
|
* then MPI_Finalize. Then the _exit is still needed to stop at_exit from
|
|
* happening in some systems.
|
|
* Note that MPIO VFD returns the address of the file-handle in the VFD struct
|
|
* because MPI_File_close wants to modify the file-handle variable.
|
|
*/
|
|
|
|
/* close file1 */
|
|
if(H5Fget_vfd_handle(file1, fapl, (void **)&mpifh_p) < 0){
|
|
printf("H5Fget_vfd_handle for file1 failed\n");
|
|
goto error;
|
|
}
|
|
if(MPI_File_close(mpifh_p)!=MPI_SUCCESS){
|
|
printf("MPI_File_close for file1 failed\n");
|
|
goto error;
|
|
}
|
|
/* close file2 */
|
|
if(H5Fget_vfd_handle(file2, fapl, (void **)&mpifh_p) < 0){
|
|
printf("H5Fget_vfd_handle for file2 failed\n");
|
|
goto error;
|
|
}
|
|
if(MPI_File_close(mpifh_p)!=MPI_SUCCESS){
|
|
printf("MPI_File_close for file2 failed\n");
|
|
goto error;
|
|
}
|
|
|
|
fflush(stdout);
|
|
fflush(stderr);
|
|
MPI_Finalize();
|
|
HD_exit(0);
|
|
|
|
error:
|
|
fflush(stdout);
|
|
fflush(stderr);
|
|
MPI_Finalize();
|
|
HD_exit(1);
|
|
}
|
|
|