mirror of
https://github.com/HDFGroup/hdf5.git
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44a00ef876
* Strip HD prefix from string/char C API calls * HD(f)(put|get)(s|c) * HDstr* * HDv*printf * HD(s)(print|scan)f * HDperror But NOT: * HDstrcase* * HDvasprintf * HDstrtok_r * HDstrndup As those are not C99 and have portability work-around implementations. They will be handled later. * Fix th5_system.c screwup
677 lines
25 KiB
C
677 lines
25 KiB
C
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
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* Copyright by The HDF Group. *
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* All rights reserved. *
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* *
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* This file is part of HDF5. The full HDF5 copyright notice, including *
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* terms governing use, modification, and redistribution, is contained in *
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* the COPYING file, which can be found at the root of the source code *
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* distribution tree, or in https://www.hdfgroup.org/licenses. *
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* If you do not have access to either file, you may request a copy from *
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* help@hdfgroup.org. *
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* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
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#include "H5private.h"
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#include "h5tools.h"
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#include "h5tools_utils.h"
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#include "h5diff.h"
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#define ATTR_NAME_MAX 255
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typedef struct table_attr_t {
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char *name;
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unsigned exist[2];
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} match_attr_t;
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typedef struct table_attrs_t {
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size_t size;
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size_t nattrs;
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size_t nattrs_only1;
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size_t nattrs_only2;
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match_attr_t *attrs;
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} table_attrs_t;
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/*-------------------------------------------------------------------------
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* Function: table_attrs_init
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*
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* Purpose: Initialize the table
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*
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* Parameter:
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* - tbl [OUT]
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*
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*------------------------------------------------------------------------*/
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static void
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table_attrs_init(table_attrs_t **tbl)
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{
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table_attrs_t *table_attrs = (table_attrs_t *)malloc(sizeof(table_attrs_t));
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table_attrs->size = 0;
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table_attrs->nattrs = 0;
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table_attrs->nattrs_only1 = 0;
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table_attrs->nattrs_only2 = 0;
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table_attrs->attrs = NULL;
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*tbl = table_attrs;
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}
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/*-------------------------------------------------------------------------
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* Function: table_attrs_free
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*
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* Purpose: free given table
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*
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* Parameter:
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* - table [IN]
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*
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*------------------------------------------------------------------------*/
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static void
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table_attrs_free(table_attrs_t *table)
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{
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unsigned int i;
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if (table) {
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if (table->attrs) {
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for (i = 0; i < table->nattrs; i++) {
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if (table->attrs[i].name) {
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free(table->attrs[i].name);
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}
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} /* end for */
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free(table->attrs);
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table->attrs = NULL;
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} /* end if */
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free(table);
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table = NULL;
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}
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}
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/*-------------------------------------------------------------------------
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* Function: table_attr_mark_exist
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*
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* Purpose: mark given attribute name to table as sign of exist
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*
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* Parameter:
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* - exist [IN]
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* - name [IN] : attribute name
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* - table [OUT]
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*
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*------------------------------------------------------------------------*/
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static void
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table_attr_mark_exist(const unsigned *exist, char *name, table_attrs_t *table)
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{
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if (table->nattrs == table->size) {
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match_attr_t *new_attrs;
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table->size = MAX(1, table->size * 2);
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new_attrs = (match_attr_t *)realloc(table->attrs, table->size * sizeof(match_attr_t));
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if (new_attrs)
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table->attrs = new_attrs;
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} /* end if */
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if (table->nattrs < table->size) {
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size_t curr_val;
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curr_val = table->nattrs;
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table->attrs[curr_val].exist[0] = exist[0];
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table->attrs[curr_val].exist[1] = exist[1];
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if (name)
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table->attrs[curr_val].name = (char *)strdup(name);
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table->nattrs++;
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}
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}
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/*-------------------------------------------------------------------------
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* Function: build_match_list_attrs
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*
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* Purpose: get list of matching attribute name from obj1 and obj2
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*
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* Note:
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* Find common attribute; the algorithm for search is referred from
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* build_match_list() in h5diff.c .
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*
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* Parameter:
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* table_out [OUT] : return the list
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*------------------------------------------------------------------------*/
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static herr_t
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build_match_list_attrs(hid_t loc1_id, hid_t loc2_id, table_attrs_t **table_out, diff_opt_t *opts)
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{
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table_attrs_t *table_lp = NULL;
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H5O_info2_t oinfo1, oinfo2; /* Object info */
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hid_t attr1_id = H5I_INVALID_HID; /* attr ID */
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hid_t attr2_id = H5I_INVALID_HID; /* attr ID */
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size_t curr1 = 0;
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size_t curr2 = 0;
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unsigned infile[2];
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char name1[ATTR_NAME_MAX];
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char name2[ATTR_NAME_MAX];
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int cmp;
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unsigned i;
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herr_t ret_value = SUCCEED;
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H5TOOLS_START_DEBUG(" - errstat:%d", opts->err_stat);
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if (H5Oget_info3(loc1_id, &oinfo1, H5O_INFO_NUM_ATTRS) < 0) {
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H5TOOLS_GOTO_ERROR(FAIL, "H5Oget_info first object failed");
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}
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H5TOOLS_DEBUG("H5Oget_info3 loc1id=%d", oinfo1.num_attrs);
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if (H5Oget_info3(loc2_id, &oinfo2, H5O_INFO_NUM_ATTRS) < 0) {
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H5TOOLS_GOTO_ERROR(FAIL, "H5Oget_info second object failed");
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}
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H5TOOLS_DEBUG("H5Oget_info3 loc2id=%d", oinfo2.num_attrs);
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table_attrs_init(&table_lp);
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if (table_lp == NULL)
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H5TOOLS_GOTO_ERROR(FAIL, "Table allocation failed");
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/*--------------------------------------------------
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* build the list
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*/
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while (curr1 < oinfo1.num_attrs && curr2 < oinfo2.num_attrs) {
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H5TOOLS_DEBUG("list_attrs 1: %ld - %ld", curr1, oinfo1.num_attrs);
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H5TOOLS_DEBUG("list_attrs 2: %ld - %ld", curr2, oinfo2.num_attrs);
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/*------------------
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* open attribute1 */
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if ((attr1_id = H5Aopen_by_idx(loc1_id, ".", H5_INDEX_NAME, H5_ITER_INC, (hsize_t)curr1, H5P_DEFAULT,
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H5P_DEFAULT)) < 0)
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H5TOOLS_GOTO_ERROR(FAIL, "H5Aopen_by_idx first attribute failed");
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/* get name */
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if (H5Aget_name(attr1_id, (size_t)ATTR_NAME_MAX, name1) < 0)
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H5TOOLS_GOTO_ERROR(FAIL, "H5Aget_name first attribute failed");
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/*------------------
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* open attribute2 */
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if ((attr2_id = H5Aopen_by_idx(loc2_id, ".", H5_INDEX_NAME, H5_ITER_INC, (hsize_t)curr2, H5P_DEFAULT,
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H5P_DEFAULT)) < 0)
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H5TOOLS_GOTO_ERROR(FAIL, "H5Aopen_by_idx second attribute failed");
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/* get name */
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if (H5Aget_name(attr2_id, (size_t)ATTR_NAME_MAX, name2) < 0)
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H5TOOLS_GOTO_ERROR(FAIL, "H5Aget_name second attribute failed");
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/* criteria is string compare */
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cmp = strcmp(name1, name2);
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if (cmp == 0) {
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infile[0] = 1;
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infile[1] = 1;
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table_attr_mark_exist(infile, name1, table_lp);
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curr1++;
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curr2++;
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}
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else if (cmp < 0) {
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infile[0] = 1;
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infile[1] = 0;
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table_attr_mark_exist(infile, name1, table_lp);
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table_lp->nattrs_only1++;
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curr1++;
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}
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else {
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infile[0] = 0;
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infile[1] = 1;
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table_attr_mark_exist(infile, name2, table_lp);
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table_lp->nattrs_only2++;
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curr2++;
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}
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/* close for next turn */
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H5Aclose(attr1_id);
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attr1_id = H5I_INVALID_HID;
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H5Aclose(attr2_id);
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attr2_id = H5I_INVALID_HID;
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} /* end while */
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/* list1 did not end */
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infile[0] = 1;
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infile[1] = 0;
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while (curr1 < oinfo1.num_attrs) {
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H5TOOLS_DEBUG("list_attrs 1: %ld - %ld", curr1, oinfo1.num_attrs);
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/*------------------
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* open attribute1 */
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if ((attr1_id = H5Aopen_by_idx(loc1_id, ".", H5_INDEX_NAME, H5_ITER_INC, (hsize_t)curr1, H5P_DEFAULT,
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H5P_DEFAULT)) < 0)
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H5TOOLS_GOTO_ERROR(FAIL, "H5Aopen_by_idx first attribute failed");
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/* get name */
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if (H5Aget_name(attr1_id, (size_t)ATTR_NAME_MAX, name1) < 0)
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H5TOOLS_GOTO_ERROR(FAIL, "H5Aget_name first attribute failed");
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H5TOOLS_DEBUG("list_attrs 1 name - %s", name1);
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table_attr_mark_exist(infile, name1, table_lp);
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table_lp->nattrs_only1++;
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curr1++;
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/* close for next turn */
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H5Aclose(attr1_id);
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attr1_id = H5I_INVALID_HID;
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}
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/* list2 did not end */
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infile[0] = 0;
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infile[1] = 1;
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while (curr2 < oinfo2.num_attrs) {
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H5TOOLS_DEBUG("list_attrs 2: %ld - %ld", curr2, oinfo2.num_attrs);
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/*------------------
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* open attribute2 */
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if ((attr2_id = H5Aopen_by_idx(loc2_id, ".", H5_INDEX_NAME, H5_ITER_INC, (hsize_t)curr2, H5P_DEFAULT,
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H5P_DEFAULT)) < 0)
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H5TOOLS_GOTO_ERROR(FAIL, "H5Aopen_by_idx second attribute failed");
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/* get name */
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if (H5Aget_name(attr2_id, (size_t)ATTR_NAME_MAX, name2) < 0)
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H5TOOLS_GOTO_ERROR(FAIL, "H5Aget_name second attribute failed");
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H5TOOLS_DEBUG("list_attrs 2 name - %s", name2);
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table_attr_mark_exist(infile, name2, table_lp);
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table_lp->nattrs_only2++;
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curr2++;
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/* close for next turn */
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H5Aclose(attr2_id);
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attr2_id = H5I_INVALID_HID;
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}
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/*------------------------------------------------------
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* print the list
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*/
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if (opts->mode_verbose_level == 2) {
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/* if '-v2' is detected */
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parallel_print(" obj1 obj2\n");
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parallel_print(" --------------------------------------\n");
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for (i = 0; i < (unsigned int)table_lp->nattrs; i++) {
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int c1, c2;
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c1 = (table_lp->attrs[i].exist[0]) ? 'x' : ' ';
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c2 = (table_lp->attrs[i].exist[1]) ? 'x' : ' ';
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parallel_print("%5c %6c %-15s\n", c1, c2, table_lp->attrs[i].name);
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} /* end for */
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}
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if (opts->mode_verbose_level >= 1)
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parallel_print("Attributes status: %zu common, %zu only in obj1, %zu only in obj2\n",
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table_lp->nattrs - table_lp->nattrs_only1 - table_lp->nattrs_only2,
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table_lp->nattrs_only1, table_lp->nattrs_only2);
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done:
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*table_out = table_lp;
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/* disable error reporting */
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H5E_BEGIN_TRY
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{
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H5Aclose(attr1_id);
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H5Aclose(attr2_id);
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}
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H5E_END_TRY
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H5TOOLS_ENDDEBUG(" - errstat:%d", opts->err_stat);
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return ret_value;
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}
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/*-------------------------------------------------------------------------
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* Function: diff_attr_data
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*
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* Purpose: compare attribute data located in attr1_id and attr2_id, which are
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* obtained from open attributes
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*
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* Return: number of differences found
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*-------------------------------------------------------------------------
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*/
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hsize_t
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diff_attr_data(hid_t attr1_id, hid_t attr2_id, const char *name1, const char *name2, const char *path1,
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const char *path2, diff_opt_t *opts)
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{
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hid_t space1_id = H5I_INVALID_HID; /* space ID */
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hid_t space2_id = H5I_INVALID_HID; /* space ID */
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hid_t ftype1_id = H5I_INVALID_HID; /* file data type ID */
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hid_t ftype2_id = H5I_INVALID_HID; /* file data type ID */
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hid_t mtype1_id = H5I_INVALID_HID; /* memory data type ID */
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hid_t mtype2_id = H5I_INVALID_HID; /* memory data type ID */
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size_t msize1; /* memory size of memory type */
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size_t msize2; /* memory size of memory type */
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void *buf1 = NULL; /* data buffer */
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void *buf2 = NULL; /* data buffer */
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bool buf1hasdata = false; /* buffer has data */
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bool buf2hasdata = false; /* buffer has data */
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int rank1; /* rank of dataset */
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int rank2; /* rank of dataset */
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hsize_t dims1[H5S_MAX_RANK]; /* dimensions of dataset */
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hsize_t dims2[H5S_MAX_RANK]; /* dimensions of dataset */
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hsize_t nfound = 0;
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size_t sz;
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diff_err_t ret_value = opts->err_stat;
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H5TOOLS_START_DEBUG(" - errstat:%d", opts->err_stat);
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/* get the datatypes */
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if ((ftype1_id = H5Aget_type(attr1_id)) < 0)
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H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Aget_type first attribute failed");
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if ((ftype2_id = H5Aget_type(attr2_id)) < 0)
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H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Aget_type second attribute failed");
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if (H5Tget_class(ftype1_id) == H5T_REFERENCE) {
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if ((mtype1_id = H5Tcopy(H5T_STD_REF)) < 0)
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H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Tcopy(H5T_STD_REF) first attribute ftype failed");
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}
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else {
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if ((mtype1_id = H5Tget_native_type(ftype1_id, H5T_DIR_DEFAULT)) < 0)
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H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Tget_native_type first attribute ftype failed");
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}
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if (H5Tget_class(ftype2_id) == H5T_REFERENCE) {
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if ((mtype2_id = H5Tcopy(H5T_STD_REF)) < 0)
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H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Tcopy(H5T_STD_REF) second attribute ftype failed");
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}
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else {
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if ((mtype2_id = H5Tget_native_type(ftype2_id, H5T_DIR_DEFAULT)) < 0)
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H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Tget_native_type second attribute ftype failed");
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}
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if ((msize1 = H5Tget_size(mtype1_id)) == 0)
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H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Tget_size first attribute mtype failed");
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if ((msize2 = H5Tget_size(mtype2_id)) == 0)
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H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Tget_size second attribute mtype failed");
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/* get the dataspace */
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if ((space1_id = H5Aget_space(attr1_id)) < 0)
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H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Aget_space first attribute failed");
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if ((space2_id = H5Aget_space(attr2_id)) < 0)
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H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Aget_space second attribute failed");
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/* get dimensions */
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if ((rank1 = H5Sget_simple_extent_dims(space1_id, dims1, NULL)) < 0)
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H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Sget_simple_extent_dims first attribute failed");
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if ((rank2 = H5Sget_simple_extent_dims(space2_id, dims2, NULL)) < 0)
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H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Sget_simple_extent_dims second attribute failed");
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/*----------------------------------------------------------------------
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* check for comparable TYPE and SPACE
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*----------------------------------------------------------------------
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*/
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H5TOOLS_DEBUG("Check for comparable TYPE and SPACE");
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H5TOOLS_DEBUG("attr_names: %s - %s", name1, name2);
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if (name1) {
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sz = strlen(name1);
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H5TOOLS_DEBUG("attr1_name: %s - %d", name1, sz);
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if (sz > 0) {
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opts->obj_name[0] = (char *)malloc(sz + 1);
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strncpy(opts->obj_name[0], name1, sz + 1);
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}
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}
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if (name2) {
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sz = strlen(name2);
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H5TOOLS_DEBUG("attr2_name: %s - %d", name2, sz);
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if (sz > 0) {
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opts->obj_name[1] = (char *)malloc(sz + 1);
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strncpy(opts->obj_name[1], name2, sz + 1);
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}
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}
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H5TOOLS_DEBUG("attr_names: %s - %s", opts->obj_name[0], opts->obj_name[1]);
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/* pass dims1 and dims2 for maxdims as well since attribute's maxdims
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* are always same */
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if (diff_can_type(ftype1_id, ftype2_id, rank1, rank2, dims1, dims2, dims1, dims2, opts, 0) == 1) {
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int j;
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/*-----------------------------------------------------------------
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* "upgrade" the smaller memory size
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*------------------------------------------------------------------
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*/
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if (FAIL == match_up_memsize(ftype1_id, ftype2_id, &mtype1_id, &mtype2_id, &msize1, &msize2))
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H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "match_up_memsize failed");
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H5TOOLS_DEBUG("initialize read");
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/*---------------------------------------------------------------------
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* initialize diff_opt_t structure for dimensions
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*----------------------------------------------------------------------
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*/
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opts->nelmts = 1;
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for (j = 0; j < rank1; j++) {
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opts->dims[j] = dims1[j];
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opts->nelmts *= dims1[j];
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}
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opts->rank = rank1;
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init_acc_pos((unsigned)opts->rank, opts->dims, opts->acc, opts->pos, opts->p_min_idx);
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/*---------------------------------------------------------------------
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* read
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*----------------------------------------------------------------------
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*/
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buf1 = (void *)calloc((size_t)(opts->nelmts), msize1);
|
|
buf2 = (void *)calloc((size_t)(opts->nelmts), msize2);
|
|
H5TOOLS_DEBUG("attr buffer size %ld * %ld", opts->nelmts, msize1);
|
|
if (buf1 == NULL || buf2 == NULL) {
|
|
parallel_print("cannot read into memory\n");
|
|
H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "buffer allocation failed");
|
|
}
|
|
if (H5Aread(attr1_id, mtype1_id, buf1) < 0) {
|
|
parallel_print("Failed reading attribute1 %s\n", name1);
|
|
H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Aget_type first attribute failed");
|
|
}
|
|
else
|
|
buf1hasdata = true;
|
|
H5TOOLS_DEBUG("attr H5Aread 1");
|
|
|
|
if (H5Aread(attr2_id, mtype2_id, buf2) < 0) {
|
|
parallel_print("Failed reading attribute2 %s\n", name2);
|
|
H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Aget_type second attribute failed");
|
|
}
|
|
else
|
|
buf2hasdata = true;
|
|
H5TOOLS_DEBUG("attr H5Aread 2");
|
|
|
|
/* format output string */
|
|
if (opts->obj_name[0] != NULL)
|
|
free(opts->obj_name[0]);
|
|
opts->obj_name[0] = NULL;
|
|
if (opts->obj_name[1] != NULL)
|
|
free(opts->obj_name[1]);
|
|
opts->obj_name[1] = NULL;
|
|
|
|
H5TOOLS_DEBUG("attr_names: %s - %s : %s - %s", name1, name2, path1, path2);
|
|
if (name1) {
|
|
sz = strlen(name1) + strlen(path1) + 7;
|
|
H5TOOLS_DEBUG("attr1_name: %s - %d", name1, sz);
|
|
opts->obj_name[0] = (char *)calloc(sz + 1, sizeof(char));
|
|
snprintf(opts->obj_name[0], sz, "%s of <%s>", name1, path1);
|
|
opts->obj_name[0][sz] = '\0';
|
|
}
|
|
if (name2) {
|
|
sz = strlen(name2) + strlen(path2) + 7;
|
|
H5TOOLS_DEBUG("attr2_name: %s - %d", name2, sz);
|
|
opts->obj_name[1] = (char *)calloc(sz + 1, sizeof(char));
|
|
snprintf(opts->obj_name[1], sz, "%s of <%s>", name2, path2);
|
|
opts->obj_name[1][sz] = '\0';
|
|
}
|
|
|
|
/*---------------------------------------------------------------------
|
|
* array compare
|
|
*----------------------------------------------------------------------
|
|
*/
|
|
H5TOOLS_DEBUG("array compare %s - %s", opts->obj_name[0], opts->obj_name[1]);
|
|
|
|
opts->hs_nelmts = opts->nelmts;
|
|
opts->m_tid = mtype1_id;
|
|
|
|
/* initialize the current stripmine position; this is necessary to print the array indices */
|
|
for (j = 0; j < opts->rank; j++)
|
|
opts->sm_pos[j] = (hsize_t)0;
|
|
|
|
/* always print name */
|
|
/* verbose (-v) and report (-r) mode */
|
|
if (opts->mode_verbose || opts->mode_report) {
|
|
do_print_attrname("attribute", opts->obj_name[0], opts->obj_name[1]);
|
|
|
|
nfound = diff_array(buf1, buf2, opts, attr1_id, attr2_id);
|
|
print_found(nfound);
|
|
}
|
|
/* quiet mode (-q), just count differences */
|
|
else if (opts->mode_quiet) {
|
|
nfound = diff_array(buf1, buf2, opts, attr1_id, attr2_id);
|
|
}
|
|
/* the rest (-c, none, ...) */
|
|
else {
|
|
nfound = diff_array(buf1, buf2, opts, attr1_id, attr2_id);
|
|
|
|
/* print info if compatible and difference found */
|
|
if (nfound) {
|
|
do_print_attrname("attribute", opts->obj_name[0], opts->obj_name[1]);
|
|
print_found(nfound);
|
|
} /* end if */
|
|
} /* end else */
|
|
}
|
|
H5TOOLS_DEBUG("check for comparable TYPE and SPACE complete nfound:%d - errstat:%d", nfound,
|
|
opts->err_stat);
|
|
|
|
/*----------------------------------------------------------------------
|
|
* close
|
|
*----------------------------------------------------------------------
|
|
*/
|
|
if (opts->obj_name[0] != NULL)
|
|
free(opts->obj_name[0]);
|
|
opts->obj_name[0] = NULL;
|
|
if (opts->obj_name[1] != NULL)
|
|
free(opts->obj_name[1]);
|
|
opts->obj_name[1] = NULL;
|
|
|
|
/* Free buf1 and buf2, check both VLEN-data VLEN-string to reclaim any
|
|
* VLEN memory first */
|
|
if (true == h5tools_detect_vlen(mtype1_id))
|
|
H5Treclaim(mtype1_id, space1_id, H5P_DEFAULT, buf1);
|
|
free(buf1);
|
|
buf1 = NULL;
|
|
|
|
if (true == h5tools_detect_vlen(mtype2_id))
|
|
H5Treclaim(mtype2_id, space2_id, H5P_DEFAULT, buf2);
|
|
free(buf2);
|
|
buf2 = NULL;
|
|
|
|
if (H5Tclose(ftype1_id) < 0)
|
|
H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Aget_type first attribute failed");
|
|
if (H5Tclose(ftype2_id) < 0)
|
|
H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Aget_type second attribute failed");
|
|
if (H5Sclose(space1_id) < 0)
|
|
H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Aget_type first attribute failed");
|
|
if (H5Sclose(space2_id) < 0)
|
|
H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Aget_type second attribute failed");
|
|
if (H5Tclose(mtype1_id) < 0)
|
|
H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Tclose first attribute mtype failed");
|
|
if (H5Tclose(mtype2_id) < 0)
|
|
H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Tclose second attribute mtype failed");
|
|
|
|
done:
|
|
opts->err_stat = opts->err_stat | ret_value;
|
|
|
|
H5E_BEGIN_TRY
|
|
{
|
|
if (buf1) {
|
|
if (buf1hasdata && true == h5tools_detect_vlen(mtype1_id))
|
|
H5Treclaim(mtype1_id, space1_id, H5P_DEFAULT, buf1);
|
|
free(buf1);
|
|
} /* end if */
|
|
if (buf2) {
|
|
if (buf2hasdata && true == h5tools_detect_vlen(mtype2_id))
|
|
H5Treclaim(mtype2_id, space2_id, H5P_DEFAULT, buf2);
|
|
free(buf2);
|
|
} /* end if */
|
|
|
|
H5Tclose(ftype1_id);
|
|
H5Tclose(ftype2_id);
|
|
H5Tclose(mtype1_id);
|
|
H5Tclose(mtype2_id);
|
|
H5Sclose(space1_id);
|
|
H5Sclose(space2_id);
|
|
}
|
|
H5E_END_TRY
|
|
|
|
H5TOOLS_ENDDEBUG(" - errstat:%d", opts->err_stat);
|
|
|
|
return nfound;
|
|
}
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* Function: diff_attr
|
|
*
|
|
* Purpose: compare attributes located in LOC1_ID and LOC2_ID, which are
|
|
* obtained either from
|
|
* loc_id = H5Gopen2(fid, name, H5P_DEFAULT);
|
|
* loc_id = H5Dopen2(fid, name);
|
|
* loc_id = H5Topen2(fid, name, H5P_DEFAULT);
|
|
*
|
|
* Return: number of differences found
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
|
|
hsize_t
|
|
diff_attr(hid_t loc1_id, hid_t loc2_id, const char *path1, const char *path2, diff_opt_t *opts)
|
|
{
|
|
table_attrs_t *match_list_attrs = NULL;
|
|
hid_t attr1_id = H5I_INVALID_HID; /* attr ID */
|
|
hid_t attr2_id = H5I_INVALID_HID; /* attr ID */
|
|
char *name1 = NULL;
|
|
char *name2 = NULL;
|
|
unsigned u; /* Local index variable */
|
|
hsize_t nfound = 0;
|
|
hsize_t nfound_total = 0;
|
|
diff_opt_t attr_opts;
|
|
diff_err_t ret_value = opts->err_stat;
|
|
|
|
H5TOOLS_START_DEBUG(" - errstat:%d", opts->err_stat);
|
|
attr_opts = *opts;
|
|
attr_opts.obj_name[0] = NULL;
|
|
attr_opts.obj_name[1] = NULL;
|
|
|
|
if (build_match_list_attrs(loc1_id, loc2_id, &match_list_attrs, &attr_opts) < 0) {
|
|
H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "build_match_list_attrs failed");
|
|
}
|
|
H5TOOLS_DEBUG("check match_list_attrs - opts->contents:%d - errstat:%d", attr_opts.contents,
|
|
attr_opts.err_stat);
|
|
|
|
/* if detect any unique extra attr */
|
|
if (match_list_attrs->nattrs_only1 || match_list_attrs->nattrs_only2) {
|
|
H5TOOLS_DEBUG("attributes only in one file");
|
|
/* exit will be 1 */
|
|
attr_opts.contents = 0;
|
|
}
|
|
H5TOOLS_DEBUG("match_list_attrs info - opts->contents:%d", attr_opts.contents);
|
|
|
|
for (u = 0; u < (unsigned)match_list_attrs->nattrs; u++) {
|
|
H5TOOLS_DEBUG("match_list_attrs loop[%d] - errstat:%d", u, attr_opts.err_stat);
|
|
if ((match_list_attrs->attrs[u].exist[0]) && (match_list_attrs->attrs[u].exist[1])) {
|
|
name1 = name2 = match_list_attrs->attrs[u].name;
|
|
H5TOOLS_DEBUG("name - %s", name1);
|
|
|
|
/*--------------
|
|
* attribute 1 */
|
|
if ((attr1_id = H5Aopen(loc1_id, name1, H5P_DEFAULT)) < 0)
|
|
H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Aopen first attribute failed");
|
|
|
|
/*--------------
|
|
* attribute 2 */
|
|
if ((attr2_id = H5Aopen(loc2_id, name2, H5P_DEFAULT)) < 0)
|
|
H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Aopen second attribute failed");
|
|
|
|
H5TOOLS_DEBUG("got attributes");
|
|
nfound = diff_attr_data(attr1_id, attr2_id, name1, name2, path1, path2, &attr_opts);
|
|
if (H5Aclose(attr1_id) < 0)
|
|
H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Aget_type first attribute failed");
|
|
if (H5Aclose(attr2_id) < 0)
|
|
H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Aget_type second attribute failed");
|
|
|
|
nfound_total += nfound;
|
|
}
|
|
} /* u */
|
|
|
|
done:
|
|
opts->print_header = attr_opts.print_header;
|
|
opts->contents = attr_opts.contents;
|
|
opts->not_cmp = attr_opts.not_cmp;
|
|
opts->err_stat = attr_opts.err_stat | ret_value;
|
|
|
|
H5E_BEGIN_TRY
|
|
{
|
|
table_attrs_free(match_list_attrs);
|
|
|
|
H5Aclose(attr1_id);
|
|
H5Aclose(attr2_id);
|
|
}
|
|
H5E_END_TRY
|
|
|
|
H5TOOLS_ENDDEBUG(" - errstat:%d", opts->err_stat);
|
|
return nfound_total;
|
|
}
|