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Allen Byrne 701be452e7
Fix VS2019 test reference (#668)
* OESS-98 convert plugin option to FetchContent, add tests

* Fixes for pkcfg files because of plugin option

* OESS-98 fix tools test for plugins

* Keep doxygen comments under 100 chars long - format hint

* Whitespace

* HDFFV-11144 - Reclassify CMake messages

* HDFFV-11099/11100 added help text

* Reworked switch statement to compare string instead

* Fix typo

* Update CDash mode

* Correct name of threadsafe

* Correct option name

* Undo accidental commit

* Note LLVM 10 to 11 format default changes

* Update format plugin

* Undo clang-format version 11 changes

* One more correction

* Update supported platforms

* Revert whitespace changes

* Correct whitespace

* Changes from PR#3

* HDFFV-11213 added option to control gcc10 warnings diagnostics

* HDFFV-11212 Use the new references correctly in JNI utility and tests

* format source

* Fix typo

* Add new test file

* HDFFV-11212 - update test and remove unused arg

* Minor non-space formatting changes

* Use H5I_INVALID_ID instead of "-1"

* source formatting

* add missing testfile, update jni function

* Undo commit of debug code

* remove mislocated file

* Fix h5repack test for handling of fapls and id close

* Update h5diff test files usage text

* HDFFV-11212 add new ref tests for JNI export dataset

* src format update

* Remove blank line typo

* src format typo

* long double requires %Lg

* Another long double foramt specifer S.B. %Lg

* issue with t128bit test

* Windows issue with h5dump and type.

* Fix review issues

* refactor function nesting and fix error checks

* format fixes

* Remove untested functions and javadoc quiet comments

* Restore TRY block.

* Change string append errors to memory exception

* revert to H5_JNI_FATAL_ERROR - support functions need work

* Add assertion error for h5util functions

* remove duplicate function

* format fix

* Revert HD function error handling

* Update copyright comments

* GH #386 java folder copyright corrections

* Whitespace

* GH #359 implement and fix tools 1.6 API usage

* remove excessive comments

* Flip inits to correct ifdef section

* rework ifdef to be simpler

* format issue

* Reformat ifdef inits

* remove static attribute

* format compliance

* Update names

* Revert because logic relies on float not being int

* Changes noticed from creating merge of #412

* Double underscore change

* Correct compiler version variable used

* Remove header guard underscores

* Whitespace cleanup

* Split format source and commit changes on repo push

* remove pre-split setting

* Change windows TS to use older VS.

* correct window os name

* HDFFV-11212 JNI export util and Javadoc

* Suggested review changes

* Another change found

* Committing clang-format changes

* HDFFV-11113 long double in tools

* HDFFV-11113 add note

* Disable long double tests for now

* HDFFV-11228 remove arbitrary CMake warning groups.

* Make each flag a string

* Some Javadoc warning fixes

* Updated javadoc fixes

* # WARNING: head commit changed in the meantime

HDFFV-11229 Fix long double usage in tools and java

Changed h5dump and h5ls to just print 128-bit for long double type.
Added test and file for dataset and attributes with all three float
types.

* Committing clang-format changes

* HDFFV-11229 Add release note

* HDFFV-11229 windows testfile needed

* fix typo

* Remove non supported message text

* HDFFV-11229 - change ldouble test to check both native and general

* HDFFV-11229 add second file compare

* HDFFV-11229 fix reference file

* HDFFV-11229 autotools check two refs

* HDFFV-11229 revert back to removal of NATIVE_LDOUBLE in tools output

* Committing clang-format changes

* Update release note

* Update attribute type of ref file

* Change source of ninja for macs

* try port instead of brew

* Recommended is to use brew.

* Undo non long double changes

* remove unneeded file

* Fix perl and doxygen CMake code

* Add "option" command for clang options

* Rework CMake add_custom to use the BYPRODUCTS argument

* Add stamp files to BYPRODUCTS

* Only one copy of file exists

* Fix custom cmmand depends targets

* Fix fortran custom command DEPENDS

* Add LD_LIBRARY_PATH to tests

* Add custom target for DEPENDS

* Add h5detect conditionaly to generated target DEPENDS

* Correct DEPENDS targets

* Parallel builds need the mpi compiler for pkgconfig scripts.

* install only if MPI build

* Fortran target depends

* Remove incorrect source attribute

* doxygen adjustments

* doxygen build updates

* Correct version

* Correct function version - function has been merged to 1.12

* Correct version string for map functions

* Cleanup warnings for tools debug builds

* TRILAB-227 - fix indexing for h5diff selections

* Correct location of pos to index function call

* TRILAB-227 Enable test

* Quote subset args

* Use MATCHES because of AppleClang

* if blocks needed for build modes

* Update list of DT platforms

* VS2019 correctly displays float values

* revert VS2019 change

Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
2021-05-20 22:44:36 -05:00
.github clang format push commit for develop (#453) 2021-03-11 08:28:55 -06:00
bin Add H5Dchunk_iter method for iterating over chunks (#6) 2021-05-19 17:21:52 -05:00
c++ BUG: DataSet assignment operator is missing (#503) 2021-05-19 15:48:20 -05:00
config CMake uses matches for clang (#645) 2021-05-17 16:25:55 -05:00
doc small edits (#481) 2021-03-22 13:31:42 -05:00
doxygen doygen adjustments (#614) 2021-05-04 17:43:19 -05:00
examples Align with "parallel fence" changes (#479) 2021-03-24 15:57:32 -05:00
fortran Add if blocks around fortran targets for build mode (#660) 2021-05-19 17:22:18 -05:00
hl Removes gratuitous (double)x.yF casts (#632) 2021-05-07 11:45:05 -05:00
java Update top-level COPYING file and remove COPYING files from subdirectories (#561) 2021-04-21 11:23:34 -05:00
m4 Update license url part2 (#333) 2021-02-17 08:52:36 -06:00
release_docs Fix VS2019 test reference (#668) 2021-05-20 22:44:36 -05:00
src Add H5Dchunk_iter method for iterating over chunks (#6) 2021-05-19 17:21:52 -05:00
test Add H5Dchunk_iter method for iterating over chunks (#6) 2021-05-19 17:21:52 -05:00
testpar Removes gratuitous (double)x.yF casts (#632) 2021-05-07 11:45:05 -05:00
tools CMake uses matches for clang (#645) 2021-05-17 16:25:55 -05:00
utils Update top-level COPYING file and remove COPYING files from subdirectories (#561) 2021-04-21 11:23:34 -05:00
.autom4te.cfg Update license url part2 (#333) 2021-02-17 08:52:36 -06:00
.clang-format Update clang config (#473) 2021-03-17 10:25:39 -05:00
.gitattributes Fix display of long double in tools (#469) 2021-03-17 10:27:21 -05:00
.gitignore ignore java classpath 2017-04-17 13:19:20 -05:00
.h5chkright.ini Update license url part2 (#333) 2021-02-17 08:52:36 -06:00
ACKNOWLEDGMENTS
acsite.m4 Update license url part2 (#333) 2021-02-17 08:52:36 -06:00
autogen.sh Update license url part2 (#333) 2021-02-17 08:52:36 -06:00
CMakeFilters.cmake Update license url part2 (#333) 2021-02-17 08:52:36 -06:00
CMakeInstallation.cmake CMake changes to byproducts - ninja warnings (#568) 2021-04-23 21:22:29 -05:00
CMakeLists.txt CMake advanced options for clang needs an OPTION command #556 (#557) 2021-04-20 17:42:52 -05:00
CMakePlugins.cmake Update license url part2 (#333) 2021-02-17 08:52:36 -06:00
configure.ac doygen adjustments (#614) 2021-05-04 17:43:19 -05:00
COPYING Update top-level COPYING file and remove COPYING files from subdirectories (#561) 2021-04-21 11:23:34 -05:00
COPYING_LBNL_HDF5 Add LBNL license file and modify COPYING file accordingly. 2017-03-29 13:36:52 -05:00
CTestConfig.cmake Update license url part2 (#333) 2021-02-17 08:52:36 -06:00
Makefile.am doygen adjustments (#614) 2021-05-04 17:43:19 -05:00
Makefile.dist Update license url part2 (#333) 2021-02-17 08:52:36 -06:00
MANIFEST Bmr dev hdffv 11223 (#640) 2021-05-12 14:35:53 -05:00
README.txt HDFFV-10868 - add H5Sselect API java wrappers. 2020-10-27 16:48:02 -05:00
UserMacros.cmake Update license url part2 (#333) 2021-02-17 08:52:36 -06:00

HDF5 version 1.13.0 currently under development

------------------------------------------------------------------------------
Please refer to the release_docs/INSTALL file for installation instructions.
------------------------------------------------------------------------------

THE HDF GROUP
---------------

The HDF Group is the developer of HDF5®, a high-performance software library and
data format that has been adopted across multiple industries and has become a
de facto standard in scientific and research communities.

More information about The HDF Group, the HDF5 Community and the HDF5 software
project, tools and services can be found at the Group's website.

    https://www.hdfgroup.org/


DOCUMENTATION
-------------
This release is fully functional for the API described in the documentation.
    https://portal.hdfgroup.org/display/HDF5/The+HDF5+API

Full Documentation and Programming Resources for this release can be found at
    https://portal.hdfgroup.org/display/HDF5

See the RELEASE.txt file in the release_docs/ directory for information specific
to the features and updates included in this release of the library.

Several more files are located within the release_docs/ directory with specific
details for several common platforms and configurations.

    INSTALL - Start Here. General instructions for compiling and installing the library
    INSTALL_CMAKE  - instructions for building with CMake (Kitware.com)
    INSTALL_parallel - instructions for building and configuring Parallel HDF5
    INSTALL_Windows and INSTALL_Cygwin - MS Windows installations.



HELP AND SUPPORT
----------------
Information regarding Help Desk and Support services is available at

    https://portal.hdfgroup.org/display/support/The+HDF+Help+Desk



FORUM and NEWS
--------------
The following public forums are provided for public announcements and discussions
of interest to the general HDF5 Community.

    Homepage of the Forum
        https://forum.hdfgroup.org

    News and Announcement
        https://forum.hdfgroup.org/c/news-and-announcements-from-the-hdf-group

    HDF5 and HDF4 Topics
        https://forum.hdfgroup.org/c/hdf5

These forums are provided as an open and public service for searching and reading.
Posting requires completing a simple registration and allows one to join in the
conversation.  Please read the following instructions pertaining to the Forum's
use and configuration
    https://forum.hdfgroup.org/t/quickstart-guide-welcome-to-the-new-hdf-forum


SNAPSHOTS, PREVIOUS RELEASES AND SOURCE CODE
--------------------------------------------
Periodically development code snapshots are provided at the following URL:
    https://gamma.hdfgroup.org/ftp/pub/outgoing/hdf5/snapshots/

Source packages for current and previous releases are located at:
    https://portal.hdfgroup.org/display/support/Downloads

Development code is available at our Github location:
    https://github.com/HDFGroup/hdf5.git