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https://github.com/HDFGroup/hdf5.git
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e26f4e5eed
that all HDF5 API functions are protected by a mutex lock. Basically, serialized all API calls. To use it, use configure --enable-threadsafe --with-pthread
204 lines
5.2 KiB
C
204 lines
5.2 KiB
C
/********************************************************************
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*
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* Testing thread safety. Thread Cancellation safety
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* -------------------------------------------------
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*
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* The main thread spawns a child to perform a series of dataset writes
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* to a hdf5 file. The main thread and child thread synchronizes within
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* a callback function called during a H5Diterate call afterwhich the
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* main thread attempts to cancel the child thread.
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*
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* The cancellation should only work after the child thread has safely
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* left the H5Diterate call.
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*
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* Temporary files generated:
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* ttsafe.h5
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*
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* HDF5 APIs exercised in thread:
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* H5Screate_simple, H5Tcopy, H5Tset_order, H5Dcreate, H5Dclose,
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* H5Dwrite, H5Dread, H5Diterate, H5Tclose, H5Sclose.
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*
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* Created: May 15 2000
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* Programmer: Chee Wai LEE
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*
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* Modification History
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* --------------------
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*
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********************************************************************/
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#include "ttsafe.h"
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#ifndef H5_HAVE_THREADSAFE
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static int dummy; /* just to create a non-empty object file */
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#else
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#define FILE "ttsafe.h5"
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#define DATASETNAME "commonname"
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void *tts_cancel_thread(void *);
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void tts_cancel_barrier(void);
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herr_t tts_cancel_callback(void *, hid_t, hsize_t, hssize_t *, void *);
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void cancellation_cleanup(void *);
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hid_t cancel_file;
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typedef struct cleanup_struct {
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hid_t dataset;
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hid_t datatype;
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hid_t dataspace;
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} cancel_cleanup_t;
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pthread_t childthread;
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pthread_mutex_t mutex;
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pthread_cond_t cond;
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void tts_cancel(void) {
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pthread_attr_t attribute;
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hid_t dataset;
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int buffer;
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/* make thread scheduling global */
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pthread_attr_init(&attribute);
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pthread_attr_setscope(&attribute, PTHREAD_SCOPE_SYSTEM);
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/* create a hdf5 file using H5F_ACC_TRUNC access,
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* default file creation plist and default file
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* access plist
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*/
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cancel_file = H5Fcreate(FILE, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
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pthread_create(&childthread, &attribute, tts_cancel_thread, NULL);
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tts_cancel_barrier();
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pthread_cancel(childthread);
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dataset = H5Dopen(cancel_file, DATASETNAME);
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H5Dread(dataset, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT,
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&buffer);
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if (buffer == 11) {
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/* do nothing */
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} else {
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fprintf(stderr,
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"operation unsuccessful with value at %d instead of 11\n",
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buffer);
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}
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H5Dclose(dataset);
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H5Fclose(cancel_file);
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}
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void *tts_cancel_thread(void *arg) {
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int datavalue;
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int *buffer;
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hid_t dataspace, datatype, dataset;
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hsize_t dimsf[1]; /* dataset dimensions */
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cancel_cleanup_t *cleanup_structure;
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/* define dataspace for dataset
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*/
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dimsf[0] = 1;
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dataspace = H5Screate_simple(1,dimsf,NULL);
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/* define datatype for the data using native little endian integers
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*/
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datatype = H5Tcopy(H5T_NATIVE_INT);
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H5Tset_order(datatype, H5T_ORDER_LE);
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/* create a new dataset within the file
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*/
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dataset = H5Dcreate(cancel_file, DATASETNAME, datatype, dataspace,
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H5P_DEFAULT);
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/* If thread is cancelled, make cleanup call */
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cleanup_structure = (cancel_cleanup_t*)malloc(sizeof(cancel_cleanup_t));
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cleanup_structure->dataset = dataset;
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cleanup_structure->datatype = datatype;
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cleanup_structure->dataspace = dataspace;
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pthread_cleanup_push(cancellation_cleanup, cleanup_structure);
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datavalue = 1;
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H5Dwrite(dataset, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT,
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&datavalue);
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buffer = malloc(sizeof(int));
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H5Dread(dataset, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT,
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buffer);
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H5Diterate(buffer, H5T_NATIVE_INT, dataspace, tts_cancel_callback,
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&dataset);
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sleep(3);
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datavalue = 100;
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H5Dwrite(dataset, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT,
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&datavalue);
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H5Dclose(dataset);
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H5Tclose(datatype);
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H5Sclose(dataspace);
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/* required by pthreads. the argument 0 pops the stack but does not
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execute the cleanup routine.
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*/
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pthread_cleanup_pop(0);
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return (NULL);
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}
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herr_t tts_cancel_callback(void *elem, hid_t type_id, hsize_t ndim,
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hssize_t *point, void *operator_data) {
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int value = *(int *)elem;
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hid_t dataset = *(hid_t *)operator_data;
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tts_cancel_barrier();
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sleep(3);
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if (value != 1) {
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fprintf(stderr,"Error! Element value should be 1 and not %d\n", value);
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return(-1);
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}
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value += 10;
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H5Dwrite(dataset, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT,
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&value);
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return (0);
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}
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/* need to perform the dataset, datatype and dataspace close that was
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never performed because of thread cancellation
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*/
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void cancellation_cleanup(void *arg) {
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cancel_cleanup_t *cleanup_structure = (cancel_cleanup_t *)arg;
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H5Dclose(cleanup_structure->dataset);
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H5Tclose(cleanup_structure->datatype);
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H5Sclose(cleanup_structure->dataspace);
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/* retained for debugging */
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/* printf("cancellation noted, cleaning up ... \n"); */
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}
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/*
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artificial (and specific to this test) barrier to keep track of whether
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both the main and child threads have reached a point in the program.
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*/
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void tts_cancel_barrier() {
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static int count = 2;
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pthread_mutex_lock(&mutex);
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if (count != 1) {
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count--;
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pthread_cond_wait(&cond, &mutex);
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} else {
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pthread_cond_signal(&cond);
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}
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pthread_mutex_unlock(&mutex);
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}
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void cleanup_cancel() {
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H5close();
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}
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#endif /*H5_HAVE_THREADSAFE*/
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