hdf5/tools/lib/h5tools_ref.c
Quincey Koziol 2f36ea99d4 [svn-r14284] Description:
Add H5Lvisit_by_name() API routine to library.

	Eliminated all (five!) other group traversal routines and changed them
all to use the new API routine.

	Cleaned up output of h5ls & h5stat:
		- Issue error when requesting recursive traversal of a file
			with the "group info" flag, but no group given
		- Print info about root group in all(?) appropriate situations
		- Don't print "verbose" information about root group until the
			root group is in the list of objects to display
	(mostly because h5ls & h5stat had a different twist on traversing the
groups in a file that the other utilities)

Tested on:
        FreeBSD/32 6.2 (duty) in debug mode
        FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode
        Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
                                in debug mode
        Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN,
                                in production mode
        Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN,
                                in production mode
        Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN,
                                w/szip filter, in production mode
        Mac OS X/32 10.4.10 (amazon) in debug mode
        Linux/64-ia64 2.4 (tg-login3) w/parallel, w/FORTRAN, in production mode
2007-11-24 11:49:36 -05:00

334 lines
9.2 KiB
C

/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by The HDF Group. *
* Copyright by the Board of Trustees of the University of Illinois. *
* All rights reserved. *
* *
* This file is part of HDF5. The full HDF5 copyright notice, including *
* terms governing use, modification, and redistribution, is contained in *
* the files COPYING and Copyright.html. COPYING can be found at the root *
* of the source code distribution tree; Copyright.html can be found at the *
* root level of an installed copy of the electronic HDF5 document set and *
* is linked from the top-level documents page. It can also be found at *
* http://hdfgroup.org/HDF5/doc/Copyright.html. If you do not have *
* access to either file, you may request a copy from help@hdfgroup.org. *
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
#include <stdio.h>
#include <stdlib.h>
#include "h5tools_ref.h"
#include "H5private.h"
#include "H5SLprivate.h"
#include "h5tools.h"
#include "h5tools_utils.h"
#include "h5trav.h"
/*
* Table to look up a path name for an object
* reference.
*
* This table stores mappings of reference -> path
* for all objects in the file that may be the target of
* an object reference.
*
* The 'path' is an absolute path by which the object
* can be accessed. When an object has > 1 such path,
* only one will be used in the table, with no particular
* method of selecting which one.
*/
typedef struct {
haddr_t objno; /* Object ID (i.e. address) */
const char *path; /* Object path */
} ref_path_node_t;
static H5SL_t *ref_path_table = NULL; /* the "table" (implemented with a skip list) */
static hid_t thefile = (-1);
extern char *progname;
extern int d_status;
static int ref_path_table_put(const char *, haddr_t objno);
/*-------------------------------------------------------------------------
* Function: free_ref_path_info
*
* Purpose: Free the key for a reference path table node
*
* Return: Non-negative on success, negative on failure
*
* Programmer: Quincey Koziol
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
static herr_t
free_ref_path_info(void *item, void UNUSED *key, void UNUSED *operator_data/*in,out*/)
{
ref_path_node_t *node = (ref_path_node_t *)item;
HDfree((void *)node->path);
HDfree(node);
return(0);
}
/*-------------------------------------------------------------------------
* Function: init_ref_path_cb
*
* Purpose: Called by interator to create references for
* all objects and enter them in the table.
*
* Return: Error status.
*
* Programmer: REMcG
*
*-------------------------------------------------------------------------
*/
static herr_t
init_ref_path_cb(const char *obj_name, const H5O_info_t *oinfo,
const char *already_seen, void UNUSED *_udata)
{
/* Check if the object is already in the path table */
if(NULL == already_seen) {
/* Insert the object into the path table */
ref_path_table_put(obj_name, oinfo->addr);
} /* end if */
return 0;
}
/*-------------------------------------------------------------------------
* Function: init_ref_path_table
*
* Purpose: Initalize the reference path table
*
* Return: Non-negative on success, negative on failure
*
* Programmer: Quincey Koziol
*
*-------------------------------------------------------------------------
*/
static int
init_ref_path_table(void)
{
/* Sanity check */
HDassert(thefile > 0);
/* Create skip list to store reference path information */
if((ref_path_table = H5SL_create(H5SL_TYPE_HADDR, 0.5, (size_t)16))==NULL)
return (-1);
/* Iterate over objects in this file */
if(h5trav_visit(thefile, "/", TRUE, TRUE, init_ref_path_cb, NULL, NULL) < 0) {
error_msg(progname, "unable to construct reference path table\n");
d_status = EXIT_FAILURE;
} /* end if */
return(0);
}
/*-------------------------------------------------------------------------
* Function: term_ref_path_table
*
* Purpose: Terminate the reference path table
*
* Return: Non-negative on success, negative on failure
*
* Programmer: Quincey Koziol
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
int
term_ref_path_table(void)
{
/* Destroy reference path table, freeing all memory */
if(ref_path_table)
H5SL_destroy(ref_path_table, free_ref_path_info, NULL);
return(0);
}
/*-------------------------------------------------------------------------
* Function: ref_path_table_lookup
*
* Purpose: Looks up a table entry given a path name.
* Used during construction of the table.
*
* Return: The table entre (pte) or NULL if not in the
* table.
*
* Programmer: REMcG
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
haddr_t
ref_path_table_lookup(const char *thepath)
{
H5O_info_t oi;
/* Allow lookups on the root group, even though it doesn't have any link info */
if(HDstrcmp(thepath, "/")) {
H5L_info_t li;
/* Check for external link first, so we don't return the OID of an object in another file */
if(H5Lget_info(thefile, thepath, &li, H5P_DEFAULT) < 0)
return HADDR_UNDEF;
/* UD links can't be followed, so they always "dangle" like soft links. */
if(li.type >= H5L_TYPE_UD_MIN)
return HADDR_UNDEF;
} /* end if */
/* Get the object info now */
/* (returns failure for dangling soft links) */
if(H5Oget_info_by_name(thefile, thepath, &oi, H5P_DEFAULT) < 0)
return HADDR_UNDEF;
/* Return OID */
return(oi.addr);
}
/*-------------------------------------------------------------------------
* Function: ref_path_table_put
*
* Purpose: Enter the 'obj' with 'path' in the table (assumes its not
* already there)
*
* Create an object reference, pte, and store them
* in the table.
*
* NOTE: Takes ownership of the path name string passed in!
*
* Return: Non-negative on success, negative on failure
*
* Programmer: REMcG
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
static int
ref_path_table_put(const char *path, haddr_t objno)
{
ref_path_node_t *new_node;
HDassert(ref_path_table);
HDassert(path);
if((new_node = HDmalloc(sizeof(ref_path_node_t))) == NULL)
return(-1);
new_node->objno = objno;
new_node->path = HDstrdup(path);
return(H5SL_insert(ref_path_table, new_node, &(new_node->objno)));
}
/*
* counter used to disambiguate multiple instances of same object.
*/
int xid = 1;
int get_next_xid(void) {
return xid++;
}
/*
* This counter is used to create fake object ID's
* The idea is to set it to the largest possible offest, which
* minimizes the chance of collision with a real object id.
*
*/
haddr_t fake_xid = HADDR_MAX;
haddr_t
get_fake_xid (void) {
return (fake_xid--);
}
/*
* for an object that does not have an object id (e.g., soft link),
* create a table entry with a fake object id as the key.
*
* Assumes 'path' is for an object that is not in the table.
*
*/
haddr_t
ref_path_table_gen_fake(const char *path)
{
haddr_t fake_objno;
/* Generate fake ID for string */
fake_objno = get_fake_xid();
/* Create ref path table, if it hasn't already been created */
if(ref_path_table == NULL)
init_ref_path_table();
/* Insert "fake" object into table */
ref_path_table_put(path, fake_objno);
return(fake_objno);
}
/*-------------------------------------------------------------------------
* Function: lookup_ref_path
*
* Purpose: Lookup the path to the object with refernce 'ref'.
*
* Return: Return a path to the object, or NULL if not found.
*
* Programmer: REMcG
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
const char *
lookup_ref_path(haddr_t ref)
{
ref_path_node_t *node;
/* Be safer for h5ls */
if(thefile < 0)
return(NULL);
/* Create ref path table, if it hasn't already been created */
if(ref_path_table == NULL)
init_ref_path_table();
node = H5SL_search(ref_path_table, &ref);
return(node ? node->path : NULL);
}
/*-------------------------------------------------------------------------
* Function: fill_ref_path_table
*
* Purpose: Called by interator to create references for
* all objects and enter them in the table.
*
* Return: Error status.
*
* Programmer: REMcG
*
*-------------------------------------------------------------------------
*/
herr_t
fill_ref_path_table(hid_t fid)
{
/* Set file ID for later queries (XXX: this should be fixed) */
thefile = fid;
/* Defer creating the ref path table until it's needed */
return 0;
}