mirror of
https://github.com/HDFGroup/hdf5.git
synced 2024-12-27 08:01:04 +08:00
f859cb732b
* fixed missed closing of a dataset * fixed missed closing of a dataset * fixed typo in error return * Committing clang-format changes * minor edits * code format * Committing clang-format changes * code format * minor edit * switched from using MPI_count, to actual bytes written for H5FD_mpio_debug rw debugging * Committing clang-format changes * changed size_i in printf to reflect the I/O. * Committing clang-format changes * Fixed seg fault with xlf on BE with -qintsize=8 * fixed error function string * spelling corrections via codespell, added new spell check github actions * Committing clang-format changes * misc * misc * misc * misc * misc * misc * misc * misc * misc * misc * misc * misc * misc * misc * Committing clang-format changes * misc * misc * misc * misc * misc * misc * Committing clang-format changes * misc * work around for https://github.com/codespell-project/codespell/issues/2137 * misc * added missing file * misc * misc. * misc * switch to using Codespell with GitHub Actions * misc. * misc. * fixed more sp errors * Fix new typos found by codespell. * fixed proceed with precede * fixed variable in fortran test * fixed minnum * updated spelling list Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com> Co-authored-by: Larry Knox <lrknox@hdfgroup.org>
480 lines
17 KiB
C
480 lines
17 KiB
C
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
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* Copyright by The HDF Group. *
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* Copyright by the Board of Trustees of the University of Illinois. *
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* All rights reserved. *
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* *
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* This file is part of HDF5. The full HDF5 copyright notice, including *
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* terms governing use, modification, and redistribution, is contained in *
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* the COPYING file, which can be found at the root of the source code *
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* distribution tree, or in https://www.hdfgroup.org/licenses. *
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* If you do not have access to either file, you may request a copy from *
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* help@hdfgroup.org. *
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* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
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/*
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* generate plist file
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*/
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#include "H5private.h"
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#include "hdf5.h"
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static int encode_plist(hid_t plist_id, int little_endian, int word_length, const char *filename_prefix);
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int
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main(void)
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{
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hid_t dcpl1; /* dataset create prop. list */
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hid_t dapl1; /* dataset access prop. list */
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hid_t dxpl1; /* dataset xfer prop. list */
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hid_t gcpl1; /* group create prop. list */
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hid_t ocpypl1; /* object copy prop. list */
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hid_t ocpl1; /* object create prop. list */
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hid_t lcpl1; /* link create prop. list */
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hid_t lapl1; /* link access prop. list */
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hid_t fapl1; /* file access prop. list */
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hid_t fcpl1; /* file create prop. list */
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hid_t strcpl1; /* string create prop. list */
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hid_t acpl1; /* attribute create prop. list */
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herr_t ret = 0;
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hsize_t chunk_size = 16384; /* chunk size */
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int fill = 2; /* Fill value */
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hsize_t max_size[1]; /* data space maximum size */
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size_t nslots = 521 * 2;
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size_t nbytes = 1048576 * 10;
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double w0 = 0.5;
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unsigned max_compact;
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unsigned min_dense;
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const char * c_to_f = "x+32";
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int little_endian;
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int word_length;
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H5AC_cache_config_t my_cache_config = {H5AC__CURR_CACHE_CONFIG_VERSION,
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1 /*TRUE*/,
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0 /*FALSE*/,
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0 /*FALSE*/,
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"temp",
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1 /*TRUE*/,
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0 /*FALSE*/,
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(2 * 2048 * 1024),
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0.3,
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(64 * 1024 * 1024),
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(4 * 1024 * 1024),
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60000,
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H5C_incr__threshold,
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0.8,
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3.0,
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1 /*TRUE*/,
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(8 * 1024 * 1024),
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H5C_flash_incr__add_space,
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2.0,
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0.25,
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H5C_decr__age_out_with_threshold,
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0.997,
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0.8,
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1 /*TRUE*/,
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(3 * 1024 * 1024),
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3,
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0 /*FALSE*/,
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0.2,
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(256 * 2048),
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H5AC_METADATA_WRITE_STRATEGY__PROCESS_0_ONLY};
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H5AC_cache_image_config_t my_cache_image_config = {H5AC__CURR_CACHE_IMAGE_CONFIG_VERSION, TRUE, FALSE,
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-1};
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/* check endianness */
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{
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short int word = 0x0001;
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char * byte = (char *)&word;
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if (byte[0] == 1)
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/* little endian */
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little_endian = 1;
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else
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/* big endian */
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little_endian = 0;
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}
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/* check word length */
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{
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word_length = 8 * sizeof(void *);
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}
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/* Explicitly initialize the library, since we are including the private header file */
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H5open();
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/******* ENCODE/DECODE DCPLS *****/
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if ((dcpl1 = H5Pcreate(H5P_DATASET_CREATE)) < 0)
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assert(dcpl1 > 0);
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if ((ret = encode_plist(dcpl1, little_endian, word_length, "testfiles/plist_files/def_dcpl_")) < 0)
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assert(ret > 0);
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if ((ret = H5Pset_chunk(dcpl1, 1, &chunk_size)) < 0)
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assert(ret > 0);
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if ((ret = H5Pset_alloc_time(dcpl1, H5D_ALLOC_TIME_LATE)) < 0)
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assert(ret > 0);
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ret = H5Tconvert(H5T_NATIVE_INT, H5T_STD_I32BE, (size_t)1, &fill, NULL, H5P_DEFAULT);
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assert(ret >= 0);
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if ((ret = H5Pset_fill_value(dcpl1, H5T_STD_I32BE, &fill)) < 0)
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assert(ret > 0);
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if ((ret = H5Pset_dset_no_attrs_hint(dcpl1, FALSE)) < 0)
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assert(ret > 0);
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max_size[0] = 100;
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if ((ret = H5Pset_external(dcpl1, "ext1.data", (off_t)0, (hsize_t)(max_size[0] * sizeof(int) / 4))) < 0)
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assert(ret > 0);
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if ((ret = H5Pset_external(dcpl1, "ext2.data", (off_t)0, (hsize_t)(max_size[0] * sizeof(int) / 4))) < 0)
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assert(ret > 0);
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if ((ret = H5Pset_external(dcpl1, "ext3.data", (off_t)0, (hsize_t)(max_size[0] * sizeof(int) / 4))) < 0)
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assert(ret > 0);
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if ((ret = H5Pset_external(dcpl1, "ext4.data", (off_t)0, (hsize_t)(max_size[0] * sizeof(int) / 4))) < 0)
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assert(ret > 0);
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if ((ret = encode_plist(dcpl1, little_endian, word_length, "testfiles/plist_files/dcpl_")) < 0)
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assert(ret > 0);
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/* release resource */
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if ((ret = H5Pclose(dcpl1)) < 0)
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assert(ret > 0);
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/******* ENCODE/DECODE DAPLS *****/
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if ((dapl1 = H5Pcreate(H5P_DATASET_ACCESS)) < 0)
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assert(dapl1 > 0);
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if ((ret = encode_plist(dapl1, little_endian, word_length, "testfiles/plist_files/def_dapl_")) < 0)
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assert(ret > 0);
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if ((ret = H5Pset_chunk_cache(dapl1, nslots, nbytes, w0)) < 0)
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assert(ret > 0);
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if ((ret = encode_plist(dapl1, little_endian, word_length, "testfiles/plist_files/dapl_")) < 0)
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assert(ret > 0);
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/* release resource */
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if ((ret = H5Pclose(dapl1)) < 0)
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assert(ret > 0);
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/******* ENCODE/DECODE DXPLS *****/
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if ((dxpl1 = H5Pcreate(H5P_DATASET_XFER)) < 0)
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assert(dxpl1 > 0);
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if ((ret = encode_plist(dxpl1, little_endian, word_length, "testfiles/plist_files/def_dxpl_")) < 0)
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assert(ret > 0);
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if ((ret = H5Pset_btree_ratios(dxpl1, 0.2f, 0.6f, 0.2f)) < 0)
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assert(ret > 0);
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if ((ret = H5Pset_hyper_vector_size(dxpl1, 5)) < 0)
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assert(ret > 0);
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#ifdef H5_HAVE_PARALLEL
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if ((ret = H5Pset_dxpl_mpio(dxpl1, H5FD_MPIO_COLLECTIVE)) < 0)
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assert(ret > 0);
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if ((ret = H5Pset_dxpl_mpio_collective_opt(dxpl1, H5FD_MPIO_INDIVIDUAL_IO)) < 0)
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assert(ret > 0);
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if ((ret = H5Pset_dxpl_mpio_chunk_opt(dxpl1, H5FD_MPIO_CHUNK_MULTI_IO)) < 0)
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assert(ret > 0);
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if ((ret = H5Pset_dxpl_mpio_chunk_opt_ratio(dxpl1, 30)) < 0)
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assert(ret > 0);
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if ((ret = H5Pset_dxpl_mpio_chunk_opt_num(dxpl1, 40)) < 0)
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assert(ret > 0);
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#endif /* H5_HAVE_PARALLEL */
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if ((ret = H5Pset_edc_check(dxpl1, H5Z_DISABLE_EDC)) < 0)
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assert(ret > 0);
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if ((ret = H5Pset_data_transform(dxpl1, c_to_f)) < 0)
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assert(ret > 0);
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if ((ret = encode_plist(dxpl1, little_endian, word_length, "testfiles/plist_files/dxpl_")) < 0)
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assert(ret > 0);
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/* release resource */
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if ((ret = H5Pclose(dxpl1)) < 0)
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assert(ret > 0);
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/******* ENCODE/DECODE GCPLS *****/
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if ((gcpl1 = H5Pcreate(H5P_GROUP_CREATE)) < 0)
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assert(gcpl1 > 0);
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if ((ret = encode_plist(gcpl1, little_endian, word_length, "testfiles/plist_files/def_gcpl_")) < 0)
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assert(ret > 0);
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if ((ret = H5Pset_local_heap_size_hint(gcpl1, 256)) < 0)
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assert(ret > 0);
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if ((ret = H5Pset_link_phase_change(gcpl1, 2, 2)) < 0)
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assert(ret > 0);
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/* Query the group creation properties */
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if ((ret = H5Pget_link_phase_change(gcpl1, &max_compact, &min_dense)) < 0)
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assert(ret > 0);
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if ((ret = H5Pset_est_link_info(gcpl1, 3, 9)) < 0)
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assert(ret > 0);
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if ((ret = H5Pset_link_creation_order(gcpl1, (H5P_CRT_ORDER_TRACKED | H5P_CRT_ORDER_INDEXED))) < 0)
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assert(ret > 0);
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if ((ret = encode_plist(gcpl1, little_endian, word_length, "testfiles/plist_files/gcpl_")) < 0)
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assert(ret > 0);
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/* release resource */
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if ((ret = H5Pclose(gcpl1)) < 0)
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assert(ret > 0);
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/******* ENCODE/DECODE LCPLS *****/
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if ((lcpl1 = H5Pcreate(H5P_LINK_CREATE)) < 0)
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assert(lcpl1 > 0);
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if ((ret = encode_plist(lcpl1, little_endian, word_length, "testfiles/plist_files/def_lcpl_")) < 0)
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assert(ret > 0);
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if ((ret = H5Pset_create_intermediate_group(lcpl1, 1 /*TRUE*/)) < 0)
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assert(ret > 0);
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if ((ret = encode_plist(lcpl1, little_endian, word_length, "testfiles/plist_files/lcpl_")) < 0)
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assert(ret > 0);
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/* release resource */
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if ((ret = H5Pclose(lcpl1)) < 0)
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assert(ret > 0);
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/******* ENCODE/DECODE OCPYLS *****/
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if ((ocpypl1 = H5Pcreate(H5P_OBJECT_COPY)) < 0)
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assert(ocpypl1 > 0);
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if ((ret = encode_plist(ocpypl1, little_endian, word_length, "testfiles/plist_files/def_ocpypl_")) < 0)
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assert(ret > 0);
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ret = H5Pset_copy_object(ocpypl1, H5O_COPY_EXPAND_EXT_LINK_FLAG);
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assert(ret >= 0);
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ret = H5Padd_merge_committed_dtype_path(ocpypl1, "foo");
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assert(ret >= 0);
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ret = H5Padd_merge_committed_dtype_path(ocpypl1, "bar");
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assert(ret >= 0);
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if ((ret = encode_plist(ocpypl1, little_endian, word_length, "testfiles/plist_files/ocpypl_")) < 0)
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assert(ret > 0);
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/* release resource */
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if ((ret = H5Pclose(ocpypl1)) < 0)
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assert(ret > 0);
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/******* ENCODE/DECODE OCPLS *****/
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if ((ocpl1 = H5Pcreate(H5P_OBJECT_CREATE)) < 0)
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assert(ocpl1 > 0);
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if ((ret = encode_plist(ocpl1, little_endian, word_length, "testfiles/plist_files/def_ocpl_")) < 0)
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assert(ret > 0);
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if ((ret = H5Pset_attr_creation_order(ocpl1, (H5P_CRT_ORDER_TRACKED | H5P_CRT_ORDER_INDEXED))) < 0)
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assert(ret > 0);
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if ((ret = H5Pset_attr_phase_change(ocpl1, 110, 105)) < 0)
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assert(ret > 0);
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if ((ret = H5Pset_filter(ocpl1, H5Z_FILTER_FLETCHER32, 0, (size_t)0, NULL)) < 0)
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assert(ret > 0);
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if ((ret = encode_plist(ocpl1, little_endian, word_length, "testfiles/plist_files/ocpl_")) < 0)
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assert(ret > 0);
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/* release resource */
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if ((ret = H5Pclose(ocpl1)) < 0)
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assert(ret > 0);
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/******* ENCODE/DECODE LAPLS *****/
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if ((lapl1 = H5Pcreate(H5P_LINK_ACCESS)) < 0)
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assert(lapl1 > 0);
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if ((ret = encode_plist(lapl1, little_endian, word_length, "testfiles/plist_files/def_lapl_")) < 0)
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assert(ret > 0);
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if ((ret = H5Pset_nlinks(lapl1, (size_t)134)) < 0)
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assert(ret > 0);
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if ((ret = H5Pset_elink_acc_flags(lapl1, H5F_ACC_RDONLY)) < 0)
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assert(ret > 0);
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if ((ret = H5Pset_elink_prefix(lapl1, "/tmpasodiasod")) < 0)
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assert(ret > 0);
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/* Create FAPL for the elink FAPL */
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if ((fapl1 = H5Pcreate(H5P_FILE_ACCESS)) < 0)
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assert(fapl1 > 0);
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if ((ret = H5Pset_alignment(fapl1, 2, 1024)) < 0)
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assert(ret > 0);
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if ((ret = H5Pset_elink_fapl(lapl1, fapl1)) < 0)
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assert(ret > 0);
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/* Close the elink's FAPL */
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if ((ret = H5Pclose(fapl1)) < 0)
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assert(ret > 0);
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if ((ret = encode_plist(lapl1, little_endian, word_length, "testfiles/plist_files/lapl_")) < 0)
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assert(ret > 0);
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/* release resource */
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if ((ret = H5Pclose(lapl1)) < 0)
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assert(ret > 0);
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/******* ENCODE/DECODE FAPLS *****/
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if ((fapl1 = H5Pcreate(H5P_FILE_ACCESS)) < 0)
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assert(fapl1 > 0);
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if ((ret = encode_plist(fapl1, little_endian, word_length, "testfiles/plist_files/def_fapl_")) < 0)
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assert(ret > 0);
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if ((ret = H5Pset_family_offset(fapl1, 1024)) < 0)
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assert(ret > 0);
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if ((ret = H5Pset_meta_block_size(fapl1, 2098452)) < 0)
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assert(ret > 0);
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if ((ret = H5Pset_sieve_buf_size(fapl1, 1048576)) < 0)
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assert(ret > 0);
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if ((ret = H5Pset_alignment(fapl1, 2, 1024)) < 0)
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assert(ret > 0);
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if ((ret = H5Pset_cache(fapl1, 1024, 128, 10485760, 0.3f)) < 0)
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assert(ret > 0);
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if ((ret = H5Pset_elink_file_cache_size(fapl1, 10485760)) < 0)
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assert(ret > 0);
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if ((ret = H5Pset_gc_references(fapl1, 1)) < 0)
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assert(ret > 0);
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if ((ret = H5Pset_small_data_block_size(fapl1, 2048)) < 0)
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assert(ret > 0);
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if ((ret = H5Pset_libver_bounds(fapl1, H5F_LIBVER_LATEST, H5F_LIBVER_LATEST)) < 0)
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assert(ret > 0);
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if ((ret = H5Pset_fclose_degree(fapl1, H5F_CLOSE_WEAK)) < 0)
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assert(ret > 0);
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if ((ret = H5Pset_multi_type(fapl1, H5FD_MEM_GHEAP)) < 0)
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assert(ret > 0);
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if ((ret = H5Pset_mdc_config(fapl1, &my_cache_config)) < 0)
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assert(ret > 0);
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if ((ret = H5Pset_mdc_image_config(fapl1, &my_cache_image_config)) < 0)
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assert(ret > 0);
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if ((ret = encode_plist(fapl1, little_endian, word_length, "testfiles/plist_files/fapl_")) < 0)
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assert(ret > 0);
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/* release resource */
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if ((ret = H5Pclose(fapl1)) < 0)
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assert(ret > 0);
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/******* ENCODE/DECODE FCPLS *****/
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if ((fcpl1 = H5Pcreate(H5P_FILE_CREATE)) < 0)
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assert(fcpl1 > 0);
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if ((ret = encode_plist(fcpl1, little_endian, word_length, "testfiles/plist_files/def_fcpl_")) < 0)
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assert(ret > 0);
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if ((ret = H5Pset_userblock(fcpl1, 1024) < 0))
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assert(ret > 0);
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if ((ret = H5Pset_istore_k(fcpl1, 3) < 0))
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assert(ret > 0);
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if ((ret = H5Pset_sym_k(fcpl1, 4, 5) < 0))
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assert(ret > 0);
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if ((ret = H5Pset_shared_mesg_nindexes(fcpl1, 8) < 0))
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assert(ret > 0);
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if ((ret = H5Pset_shared_mesg_index(fcpl1, 1, H5O_SHMESG_SDSPACE_FLAG, 32) < 0))
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assert(ret > 0);
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if ((ret = H5Pset_shared_mesg_phase_change(fcpl1, 60, 20) < 0))
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assert(ret > 0);
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if ((ret = H5Pset_sizes(fcpl1, 8, 4) < 0))
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assert(ret > 0);
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if ((ret = H5Pset_file_space_strategy(fcpl1, H5F_FSPACE_STRATEGY_PAGE, TRUE, (hsize_t)1)) < 0)
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assert(ret > 0);
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if ((ret = H5Pset_file_space_page_size(fcpl1, (hsize_t)4096)) < 0)
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assert(ret > 0);
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if ((ret = encode_plist(fcpl1, little_endian, word_length, "testfiles/plist_files/fcpl_")) < 0)
|
|
assert(ret > 0);
|
|
|
|
/* release resource */
|
|
if ((ret = H5Pclose(fcpl1)) < 0)
|
|
assert(ret > 0);
|
|
|
|
/******* ENCODE/DECODE STRCPLS *****/
|
|
strcpl1 = H5Pcreate(H5P_STRING_CREATE);
|
|
assert(strcpl1 > 0);
|
|
|
|
ret = encode_plist(strcpl1, little_endian, word_length, "testfiles/plist_files/def_strcpl_");
|
|
assert(ret > 0);
|
|
|
|
ret = H5Pset_char_encoding(strcpl1, H5T_CSET_UTF8);
|
|
assert(ret >= 0);
|
|
|
|
ret = encode_plist(strcpl1, little_endian, word_length, "testfiles/plist_files/strcpl_");
|
|
assert(ret > 0);
|
|
|
|
/* release resource */
|
|
ret = H5Pclose(strcpl1);
|
|
assert(ret >= 0);
|
|
|
|
/******* ENCODE/DECODE ACPLS *****/
|
|
acpl1 = H5Pcreate(H5P_ATTRIBUTE_CREATE);
|
|
assert(acpl1 > 0);
|
|
|
|
ret = encode_plist(acpl1, little_endian, word_length, "testfiles/plist_files/def_acpl_");
|
|
assert(ret > 0);
|
|
|
|
ret = H5Pset_char_encoding(acpl1, H5T_CSET_UTF8);
|
|
assert(ret >= 0);
|
|
|
|
ret = encode_plist(acpl1, little_endian, word_length, "testfiles/plist_files/acpl_");
|
|
assert(ret > 0);
|
|
|
|
/* release resource */
|
|
ret = H5Pclose(acpl1);
|
|
assert(ret >= 0);
|
|
|
|
return 0;
|
|
}
|
|
|
|
static int
|
|
encode_plist(hid_t plist_id, int little_endian, int word_length, const char *filename_prefix)
|
|
{
|
|
int fd = 0; /* file descriptor */
|
|
herr_t ret = 0;
|
|
void * temp_buf = NULL;
|
|
size_t temp_size = 0;
|
|
ssize_t H5_ATTR_NDEBUG_UNUSED write_size;
|
|
char filename[1024];
|
|
|
|
/* Generate filename */
|
|
if ((ret = HDsnprintf(filename, sizeof(filename), "%s%d%s", filename_prefix, word_length,
|
|
little_endian ? "le" : "be")) < 0)
|
|
HDassert(ret > 0);
|
|
|
|
/* first call to encode returns only the size of the buffer needed */
|
|
if ((ret = H5Pencode2(plist_id, NULL, &temp_size, H5P_DEFAULT)) < 0)
|
|
HDassert(ret > 0);
|
|
|
|
temp_buf = (void *)HDmalloc(temp_size);
|
|
HDassert(temp_buf);
|
|
|
|
if ((ret = H5Pencode2(plist_id, temp_buf, &temp_size, H5P_DEFAULT)) < 0)
|
|
HDassert(ret > 0);
|
|
|
|
fd = HDopen(filename, O_RDWR | O_CREAT | O_TRUNC, H5_POSIX_CREATE_MODE_RW);
|
|
HDassert(fd >= 0);
|
|
|
|
write_size = HDwrite(fd, temp_buf, temp_size);
|
|
HDassert(write_size == (ssize_t)temp_size);
|
|
|
|
HDclose(fd);
|
|
|
|
HDfree(temp_buf);
|
|
|
|
return 1;
|
|
}
|