mirror of
https://github.com/HDFGroup/hdf5.git
synced 2024-12-03 02:32:04 +08:00
427ff7da28
Bug Fix/Code Cleanup/Doc Cleanup/Optimization/Branch Sync :-) Description: Generally speaking, this is the "signed->unsigned" change to selections. However, in the process of merging code back, things got stickier and stickier until I ended up doing a big "sync the two branches up" operation. So... I brought back all the "infrastructure" fixes from the development branch to the release branch (which I think were actually making some improvement in performance) as well as fixed several bugs which had been fixed in one branch, but not the other. I've also tagged the repository before making this checkin with the label "before_signed_unsigned_changes". Platforms tested: FreeBSD 4.10 (sleipnir) w/parallel & fphdf5 FreeBSD 4.10 (sleipnir) w/threadsafe FreeBSD 4.10 (sleipnir) w/backward compatibility Solaris 2.7 (arabica) w/"purify options" Solaris 2.8 (sol) w/FORTRAN & C++ AIX 5.x (copper) w/parallel & FORTRAN IRIX64 6.5 (modi4) w/FORTRAN Linux 2.4 (heping) w/FORTRAN & C++ Misc. update:
734 lines
20 KiB
C
734 lines
20 KiB
C
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
|
||
* Copyright by the Board of Trustees of the University of Illinois. *
|
||
* All rights reserved. *
|
||
* *
|
||
* This file is part of HDF5. The full HDF5 copyright notice, including *
|
||
* terms governing use, modification, and redistribution, is contained in *
|
||
* the files COPYING and Copyright.html. COPYING can be found at the root *
|
||
* of the source code distribution tree; Copyright.html can be found at the *
|
||
* root level of an installed copy of the electronic HDF5 document set and *
|
||
* is linked from the top-level documents page. It can also be found at *
|
||
* http://hdf.ncsa.uiuc.edu/HDF5/doc/Copyright.html. If you do not have *
|
||
* access to either file, you may request a copy from hdfhelp@ncsa.uiuc.edu. *
|
||
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
|
||
|
||
/*
|
||
* Programmer: Robb Matzke <matzke@llnl.gov>
|
||
* Friday, January 23, 1998
|
||
*/
|
||
|
||
/* See H5private.h for how to include headers */
|
||
#undef NDEBUG
|
||
|
||
#define H5T_PACKAGE
|
||
#include "H5Tpkg.h" /*to turn off hardware conversions*/
|
||
|
||
#include "h5test.h"
|
||
|
||
const char *FILENAME[] = {
|
||
"cmpd_dset",
|
||
NULL
|
||
};
|
||
|
||
/* The first dataset */
|
||
typedef struct s1_t {
|
||
unsigned int a;
|
||
unsigned int b;
|
||
unsigned int c[4];
|
||
unsigned int d;
|
||
unsigned int e;
|
||
} s1_t;
|
||
|
||
/* The second dataset (same as first) */
|
||
typedef s1_t s2_t;
|
||
|
||
/* The third dataset (reversed fields of s1) */
|
||
typedef struct s3_t {
|
||
unsigned int e;
|
||
unsigned int d;
|
||
unsigned int c[4];
|
||
unsigned int b;
|
||
unsigned int a;
|
||
} s3_t;
|
||
|
||
/* The fourth dataset (a subset of s1) */
|
||
typedef struct s4_t {
|
||
unsigned int b;
|
||
unsigned int d;
|
||
} s4_t;
|
||
|
||
/* The fifth dataset (a superset of s1) */
|
||
typedef struct s5_t {
|
||
unsigned int pre;
|
||
unsigned int a;
|
||
unsigned int b;
|
||
unsigned int mid1;
|
||
unsigned int c[4];
|
||
unsigned int mid2;
|
||
unsigned int d;
|
||
unsigned int e;
|
||
unsigned int post;
|
||
} s5_t;
|
||
|
||
|
||
#if 1
|
||
# define NX 100u
|
||
# define NY 2000u
|
||
#else
|
||
# define NX 12u
|
||
# define NY 9u
|
||
#endif
|
||
|
||
|
||
/*-------------------------------------------------------------------------
|
||
* Function: main
|
||
*
|
||
* Purpose: Creates a simple dataset of a compound type and then reads
|
||
* it back. The dataset is read back in various ways to
|
||
* exercise the I/O pipeline and compound type conversion.
|
||
*
|
||
* Return: Success: 0
|
||
*
|
||
* Failure: 1
|
||
*
|
||
* Programmer: Robb Matzke
|
||
* Friday, January 23, 1998
|
||
*
|
||
* Modifications:
|
||
* Robb Matzke, 1999-06-23
|
||
* If the command line switch `--noopt' is present then the fast
|
||
* compound datatype conversion is turned off.
|
||
*-------------------------------------------------------------------------
|
||
*/
|
||
int
|
||
main (int argc, char *argv[])
|
||
{
|
||
/* First dataset */
|
||
static s1_t s1[NX*NY];
|
||
hid_t s1_tid;
|
||
|
||
/* Second dataset */
|
||
static s2_t s2[NX*NY];
|
||
hid_t s2_tid;
|
||
|
||
/* Third dataset */
|
||
static s3_t s3[NX*NY];
|
||
hid_t s3_tid;
|
||
|
||
/* Fourth dataset */
|
||
static s4_t s4[NX*NY];
|
||
hid_t s4_tid;
|
||
|
||
/* Fifth dataset */
|
||
static s5_t s5[NX*NY];
|
||
hid_t s5_tid;
|
||
|
||
/* Sixth dataset */
|
||
|
||
/* Seventh dataset */
|
||
hid_t s7_sid;
|
||
|
||
/* Eighth dataset */
|
||
s1_t *s8 = NULL;
|
||
hid_t s8_f_sid; /*file data space */
|
||
hid_t s8_m_sid; /*memory data space */
|
||
|
||
/* Ninth dataset */
|
||
|
||
/* Tenth dataset */
|
||
|
||
/* Eleventh dataset */
|
||
s4_t *s11 = NULL;
|
||
|
||
/* Other variables */
|
||
unsigned int i, j;
|
||
hid_t file, dataset, space, PRESERVE, fapl;
|
||
hid_t array_dt;
|
||
static hsize_t dim[] = {NX, NY};
|
||
hsize_t f_offset[2]; /*offset of hyperslab in file */
|
||
hsize_t h_size[2]; /*size of hyperslab */
|
||
hsize_t memb_size[1] = {4};
|
||
char filename[256];
|
||
|
||
h5_reset();
|
||
|
||
/* Turn off optimized compound converter? */
|
||
if (argc>1) {
|
||
if (argc>2 || strcmp("--noopt", argv[1])) {
|
||
fprintf(stderr, "usage: %s [--noopt]\n", argv[0]);
|
||
exit(1);
|
||
}
|
||
H5Tunregister(H5T_PERS_DONTCARE, NULL, -1, -1, H5T_conv_struct_opt);
|
||
}
|
||
|
||
/* Create the file */
|
||
fapl = h5_fileaccess();
|
||
h5_fixname(FILENAME[0], fapl, filename, sizeof(filename));
|
||
if ((file = H5Fcreate (filename, H5F_ACC_TRUNC, H5P_DEFAULT, fapl))<0) {
|
||
goto error;
|
||
}
|
||
|
||
/* Create the data space */
|
||
if ((space = H5Screate_simple (2, dim, NULL))<0) goto error;
|
||
|
||
/* Create xfer properties to preserve initialized data */
|
||
if ((PRESERVE = H5Pcreate (H5P_DATASET_XFER))<0) goto error;
|
||
if (H5Pset_preserve (PRESERVE, 1)<0) goto error;
|
||
|
||
/*
|
||
*######################################################################
|
||
* STEP 1: Save the original dataset natively.
|
||
*/
|
||
TESTING("basic compound write");
|
||
|
||
/* Initialize the dataset */
|
||
for (i=0; i<NX*NY; i++) {
|
||
s1[i].a = 8*i+0;
|
||
s1[i].b = 2000+2*i;
|
||
s1[i].c[0] = 8*i+2;
|
||
s1[i].c[1] = 8*i+3;
|
||
s1[i].c[2] = 8*i+4;
|
||
s1[i].c[3] = 8*i+5;
|
||
s1[i].d = 2001+2*i;
|
||
s1[i].e = 8*i+7;
|
||
}
|
||
|
||
/* Create the memory data type */
|
||
if ((s1_tid = H5Tcreate (H5T_COMPOUND, sizeof(s1_t)))<0)
|
||
goto error;
|
||
array_dt=H5Tarray_create(H5T_NATIVE_INT, 1, memb_size, NULL);
|
||
if (H5Tinsert (s1_tid, "a", HOFFSET(s1_t,a), H5T_NATIVE_INT)<0 ||
|
||
H5Tinsert (s1_tid, "b", HOFFSET(s1_t,b), H5T_NATIVE_INT)<0 ||
|
||
H5Tinsert (s1_tid, "c", HOFFSET(s1_t,c), array_dt)<0 ||
|
||
H5Tinsert (s1_tid, "d", HOFFSET(s1_t,d), H5T_NATIVE_INT)<0 ||
|
||
H5Tinsert (s1_tid, "e", HOFFSET(s1_t,e), H5T_NATIVE_INT)<0)
|
||
goto error;
|
||
H5Tclose(array_dt);
|
||
|
||
/* Create the dataset */
|
||
if ((dataset = H5Dcreate (file, "s1", s1_tid, space, H5P_DEFAULT))<0) {
|
||
goto error;
|
||
}
|
||
|
||
/* Write the data */
|
||
if (H5Dwrite (dataset, s1_tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, s1)<0) {
|
||
goto error;
|
||
}
|
||
PASSED();
|
||
|
||
/*
|
||
*######################################################################
|
||
* STEP 2: We create a new type ID for the second dataset even though
|
||
* it's the same as the first just to test things better, but
|
||
* in fact, we could have used s1_tid.
|
||
*/
|
||
TESTING("basic compound read");
|
||
|
||
/* Create a data type for s2 */
|
||
if ((s2_tid = H5Tcreate (H5T_COMPOUND, sizeof(s2_t)))<0)
|
||
goto error;
|
||
array_dt=H5Tarray_create(H5T_NATIVE_INT, 1, memb_size, NULL);
|
||
if (H5Tinsert (s2_tid, "a", HOFFSET(s2_t,a), H5T_NATIVE_INT)<0 ||
|
||
H5Tinsert (s2_tid, "b", HOFFSET(s2_t,b), H5T_NATIVE_INT)<0 ||
|
||
H5Tinsert (s2_tid, "c", HOFFSET(s2_t,c), array_dt)<0 ||
|
||
H5Tinsert (s2_tid, "d", HOFFSET(s2_t,d), H5T_NATIVE_INT)<0 ||
|
||
H5Tinsert (s2_tid, "e", HOFFSET(s2_t,e), H5T_NATIVE_INT)<0)
|
||
goto error;
|
||
H5Tclose(array_dt);
|
||
|
||
/* Read the data */
|
||
if (H5Dread (dataset, s2_tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, s2)<0) {
|
||
goto error;
|
||
}
|
||
|
||
/* Compare s2 with s1. They should be the same */
|
||
for (i=0; i<NX*NY; i++) {
|
||
if (s1[i].a!=s2[i].a ||
|
||
s1[i].b!=s2[i].b ||
|
||
s1[i].c[0]!=s2[i].c[0] ||
|
||
s1[i].c[1]!=s2[i].c[1] ||
|
||
s1[i].c[2]!=s2[i].c[2] ||
|
||
s1[i].c[3]!=s2[i].c[3] ||
|
||
s1[i].d!=s2[i].d ||
|
||
s1[i].e!=s2[i].e) {
|
||
H5_FAILED();
|
||
puts(" Incorrect values read from the file");
|
||
goto error;
|
||
}
|
||
}
|
||
PASSED();
|
||
|
||
/*
|
||
*######################################################################
|
||
* STEP 3: Read the dataset back into a third memory buffer. This buffer
|
||
* has the same data space but the data type is different: the
|
||
* data type is a struct whose members are in the opposite order.
|
||
*/
|
||
TESTING("reversal of struct members");
|
||
|
||
/* Create a data type for s3 */
|
||
if ((s3_tid = H5Tcreate (H5T_COMPOUND, sizeof(s3_t)))<0)
|
||
goto error;
|
||
array_dt=H5Tarray_create(H5T_NATIVE_INT, 1, memb_size, NULL);
|
||
if (H5Tinsert (s3_tid, "a", HOFFSET(s3_t,a), H5T_NATIVE_INT)<0 ||
|
||
H5Tinsert (s3_tid, "b", HOFFSET(s3_t,b), H5T_NATIVE_INT)<0 ||
|
||
H5Tinsert (s3_tid, "c", HOFFSET(s3_t,c), array_dt)<0 ||
|
||
H5Tinsert (s3_tid, "d", HOFFSET(s3_t,d), H5T_NATIVE_INT)<0 ||
|
||
H5Tinsert (s3_tid, "e", HOFFSET(s3_t,e), H5T_NATIVE_INT)<0)
|
||
goto error;
|
||
H5Tclose(array_dt);
|
||
|
||
/* Read the data */
|
||
if (H5Dread (dataset, s3_tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, s3)<0) {
|
||
goto error;
|
||
}
|
||
|
||
/* Compare s3 with s1. They should be the same */
|
||
for (i=0; i<NX*NY; i++) {
|
||
if (s1[i].a!=s3[i].a ||
|
||
s1[i].b!=s3[i].b ||
|
||
s1[i].c[0]!=s3[i].c[0] ||
|
||
s1[i].c[1]!=s3[i].c[1] ||
|
||
s1[i].c[2]!=s3[i].c[2] ||
|
||
s1[i].c[3]!=s3[i].c[3] ||
|
||
s1[i].d!=s3[i].d ||
|
||
s1[i].e!=s3[i].e) {
|
||
H5_FAILED();
|
||
puts(" Incorrect values read from the file");
|
||
goto error;
|
||
}
|
||
}
|
||
PASSED();
|
||
|
||
/*
|
||
*######################################################################
|
||
* STEP 4: Read a subset of the members. Of the <a,b,c,d,e> members
|
||
* stored on disk we'll read <b,d>.
|
||
*/
|
||
TESTING("subset struct read");
|
||
|
||
/* Create a datatype for s4 */
|
||
if ((s4_tid = H5Tcreate (H5T_COMPOUND, sizeof(s4_t)))<0) goto error;
|
||
if (H5Tinsert (s4_tid, "b", HOFFSET(s4_t,b), H5T_NATIVE_INT)<0) goto error;
|
||
if (H5Tinsert (s4_tid, "d", HOFFSET(s4_t,d), H5T_NATIVE_INT)<0) goto error;
|
||
|
||
/* Read the data */
|
||
if (H5Dread (dataset, s4_tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, s4)<0) {
|
||
goto error;
|
||
}
|
||
|
||
/* Compare s4 with s1 */
|
||
for (i=0; i<NX*NY; i++) {
|
||
if (s1[i].b!=s4[i].b ||
|
||
s1[i].d!=s4[i].d) {
|
||
H5_FAILED();
|
||
puts(" Incorrect values read from the file");
|
||
goto error;
|
||
}
|
||
}
|
||
PASSED();
|
||
|
||
/*
|
||
*######################################################################
|
||
* STEP 5: Read all the members into a struct which has other members
|
||
* which have already been initialized.
|
||
*/
|
||
TESTING("partially initialized superset read");
|
||
|
||
/* Initialize some members */
|
||
for (i=0; i<NX*NY; i++) {
|
||
s5[i].pre = 1000+4*i;
|
||
s5[i].mid1 = 1001+4*i;
|
||
s5[i].mid2 = 1002+4*i;
|
||
s5[i].post = 1003+4*i;
|
||
}
|
||
|
||
/* Create a data type for s5 */
|
||
if ((s5_tid = H5Tcreate (H5T_COMPOUND, sizeof(s5_t)))<0)
|
||
goto error;
|
||
array_dt=H5Tarray_create(H5T_NATIVE_INT, 1, memb_size, NULL);
|
||
if (H5Tinsert (s5_tid, "a", HOFFSET(s5_t,a), H5T_NATIVE_INT)<0 ||
|
||
H5Tinsert (s5_tid, "b", HOFFSET(s5_t,b), H5T_NATIVE_INT)<0 ||
|
||
H5Tinsert (s5_tid, "c", HOFFSET(s5_t,c), array_dt)<0 ||
|
||
H5Tinsert (s5_tid, "d", HOFFSET(s5_t,d), H5T_NATIVE_INT)<0 ||
|
||
H5Tinsert (s5_tid, "e", HOFFSET(s5_t,e), H5T_NATIVE_INT))
|
||
goto error;
|
||
H5Tclose(array_dt);
|
||
|
||
/* Read the data */
|
||
if (H5Dread (dataset, s5_tid, H5S_ALL, H5S_ALL, PRESERVE, s5)<0) {
|
||
goto error;
|
||
}
|
||
|
||
/* Check that the data was read properly */
|
||
for (i=0; i<NX*NY; i++) {
|
||
if (s1[i].a!=s5[i].a ||
|
||
s1[i].b!=s5[i].b ||
|
||
s1[i].c[0]!=s5[i].c[0] ||
|
||
s1[i].c[1]!=s5[i].c[1] ||
|
||
s1[i].c[2]!=s5[i].c[2] ||
|
||
s1[i].c[3]!=s5[i].c[3] ||
|
||
s1[i].d!=s5[i].d ||
|
||
s1[i].e!=s5[i].e) {
|
||
H5_FAILED();
|
||
puts(" Incorrect values read from the file");
|
||
goto error;
|
||
}
|
||
}
|
||
|
||
/* Check that no previous values were clobbered */
|
||
for (i=0; i<NX*NY; i++) {
|
||
if (s5[i].pre != 1000+4*i ||
|
||
s5[i].mid1 != 1001+4*i ||
|
||
s5[i].mid2 != 1002+4*i ||
|
||
s5[i].post != 1003+4*i) {
|
||
H5_FAILED();
|
||
puts(" Memory values were clobbered");
|
||
goto error;
|
||
}
|
||
}
|
||
PASSED();
|
||
|
||
/*
|
||
*######################################################################
|
||
* STEP 6: Update fields `b' and `d' on the file leaving the other
|
||
* fields unchanged. This tests member alignment and background
|
||
* buffers.
|
||
*/
|
||
TESTING("partially initialized superset write");
|
||
|
||
/* Initialize `s4' with new values */
|
||
for (i=0; i<NX*NY; i++) {
|
||
s4[i].b = 8*i+1;
|
||
s4[i].d = 8*i+6;
|
||
}
|
||
|
||
/* Write the data to file */
|
||
if (H5Dwrite (dataset, s4_tid, H5S_ALL, H5S_ALL, PRESERVE, s4)<0) {
|
||
goto error;
|
||
}
|
||
|
||
/* Read the data back */
|
||
if (H5Dread (dataset, s1_tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, s1)<0) {
|
||
goto error;
|
||
}
|
||
|
||
/* Compare */
|
||
for (i=0; i<NX*NY; i++) {
|
||
if (s1[i].a != 8*i+0 ||
|
||
s1[i].b != 8*i+1 ||
|
||
s1[i].c[0] != 8*i+2 ||
|
||
s1[i].c[1] != 8*i+3 ||
|
||
s1[i].c[2] != 8*i+4 ||
|
||
s1[i].c[3] != 8*i+5 ||
|
||
s1[i].d != 8*i+6 ||
|
||
s1[i].e != 8*i+7) {
|
||
H5_FAILED();
|
||
printf(" i==%u, row=%u, col=%u\n", i, i/NY, i%NY);
|
||
printf(" got: {%7d,%7d,[%7d,%7d,%7d,%7d],%7d,%7d}\n",
|
||
s1[i].a, s1[i].b, s1[i].c[0], s1[i].c[1], s1[i].c[2],
|
||
s1[i].c[3], s1[i].d, s1[i].e);
|
||
printf(" ans: {%7d,%7d,[%7d,%7d,%7d,%7d],%7d,%7d}\n",
|
||
8*i+0, 8*i+1, 8*i+2, 8*i+3, 8*i+4, 8*i+5, 8*i+6, 8*i+7);
|
||
goto error;
|
||
}
|
||
}
|
||
PASSED();
|
||
|
||
/*
|
||
*######################################################################
|
||
* STEP 7. Read the original dataset with an explicit data space. Even
|
||
* though these data spaces are equal it tests a different part of the
|
||
* library.
|
||
*/
|
||
TESTING("explicit data space");
|
||
|
||
/* Create the data space */
|
||
if ((s7_sid = H5Screate_simple (2, dim, NULL))<0) goto error;
|
||
|
||
/* Read the dataset */
|
||
if (H5Dread (dataset, s2_tid, s7_sid, H5S_ALL, H5P_DEFAULT, s2)<0) {
|
||
goto error;
|
||
}
|
||
|
||
/* Compare */
|
||
for (i=0; i<NX*NY; i++) {
|
||
if (s2[i].a != s1[i].a ||
|
||
s2[i].b != s1[i].b ||
|
||
s2[i].c[0] != s1[i].c[0] ||
|
||
s2[i].c[1] != s1[i].c[1] ||
|
||
s2[i].c[2] != s1[i].c[2] ||
|
||
s2[i].c[3] != s1[i].c[3] ||
|
||
s2[i].d != s1[i].d ||
|
||
s2[i].e != s1[i].e) {
|
||
H5_FAILED();
|
||
puts(" Incorrect values read from file");
|
||
goto error;
|
||
}
|
||
}
|
||
PASSED();
|
||
|
||
|
||
/*
|
||
*######################################################################
|
||
* STEP 8. Read a hyperslab of the file into a complete array in memory.
|
||
* The hyperslab is the middle third of the array.
|
||
*/
|
||
TESTING("hyperslab partial read to array");
|
||
|
||
/* Create the file data space */
|
||
if ((s8_f_sid = H5Dget_space (dataset))<0) goto error;
|
||
f_offset[0] = NX/3;
|
||
f_offset[1] = NY/3;
|
||
h_size[0] = 2*NX/3 - f_offset[0];
|
||
h_size[1] = 2*NY/3 - f_offset[1];
|
||
if (H5Sselect_hyperslab (s8_f_sid, H5S_SELECT_SET, f_offset, NULL,
|
||
h_size, NULL)<0) goto error;
|
||
|
||
/* Create memory data space */
|
||
if ((s8_m_sid = H5Screate_simple (2, h_size, NULL))<0) goto error;
|
||
|
||
/* Read the dataset */
|
||
s8 = calloc ((size_t)(h_size[0]*h_size[1]), sizeof(s1_t));
|
||
assert (s8);
|
||
if (H5Dread (dataset, s1_tid, s8_m_sid, s8_f_sid, H5P_DEFAULT, s8)<0) {
|
||
goto error;
|
||
}
|
||
|
||
/* Compare */
|
||
for (i=0; i<h_size[0]; i++) {
|
||
for (j=0; j<h_size[1]; j++) {
|
||
s1_t *ps1 = s1 + (f_offset[0]+i)*NY + f_offset[1] + j;
|
||
s1_t *ps8 = s8 + i*h_size[1] + j;
|
||
|
||
if (ps8->a != ps1->a ||
|
||
ps8->b != ps1->b ||
|
||
ps8->c[0] != ps1->c[0] ||
|
||
ps8->c[1] != ps1->c[1] ||
|
||
ps8->c[2] != ps1->c[2] ||
|
||
ps8->c[3] != ps1->c[3] ||
|
||
ps8->d != ps1->d ||
|
||
ps8->e != ps1->e) {
|
||
H5_FAILED();
|
||
puts(" Incorrect values read from file");
|
||
goto error;
|
||
}
|
||
}
|
||
}
|
||
|
||
free (s8);
|
||
s8 = NULL;
|
||
PASSED();
|
||
|
||
|
||
/*
|
||
*######################################################################
|
||
* STEP 9. Read a hyperslab of the file into a hyperslab of memory. The
|
||
* part of memory not read is already initialized and must not change.
|
||
*/
|
||
TESTING("hyperslab partial read to another hyperslab");
|
||
|
||
/* Initialize */
|
||
for (i=0; i<NX*NY; i++) {
|
||
s2[i].a = s2[i].b = s2[i].d = s2[i].e = (unsigned)(-1);
|
||
s2[i].c[0] = s2[i].c[1] = s2[i].c[2] = s2[i].c[3] = (unsigned)(-1);
|
||
}
|
||
|
||
/* Read the hyperslab */
|
||
if (H5Dread (dataset, s2_tid, s8_f_sid, s8_f_sid, H5P_DEFAULT, s2)<0) {
|
||
goto error;
|
||
}
|
||
|
||
/* Compare */
|
||
for (i=0; i<NX; i++) {
|
||
for (j=0; j<NY; j++) {
|
||
s1_t *ps1 = s1 + i*NY + j;
|
||
s2_t *ps2 = s2 + i*NY + j;
|
||
if (i>=f_offset[0] &&
|
||
i<f_offset[0]+h_size[0] &&
|
||
j>=f_offset[1] &&
|
||
j<f_offset[1]+h_size[1]) {
|
||
if (ps2->a != ps1->a ||
|
||
ps2->b != ps1->b ||
|
||
ps2->c[0] != ps1->c[0] ||
|
||
ps2->c[1] != ps1->c[1] ||
|
||
ps2->c[2] != ps1->c[2] ||
|
||
ps2->c[3] != ps1->c[3] ||
|
||
ps2->d != ps1->d ||
|
||
ps2->e != ps1->e) {
|
||
H5_FAILED();
|
||
puts(" Memory values clobbered");
|
||
goto error;
|
||
}
|
||
} else {
|
||
if (ps2->a != (unsigned)(-1) ||
|
||
ps2->b != (unsigned)(-1) ||
|
||
ps2->c[0] != (unsigned)(-1) ||
|
||
ps2->c[1] != (unsigned)(-1) ||
|
||
ps2->c[2] != (unsigned)(-1) ||
|
||
ps2->c[3] != (unsigned)(-1) ||
|
||
ps2->d != (unsigned)(-1) ||
|
||
ps2->e != (unsigned)(-1)) {
|
||
H5_FAILED();
|
||
puts(" Incorrect values read from file");
|
||
goto error;
|
||
}
|
||
}
|
||
}
|
||
}
|
||
PASSED();
|
||
|
||
/*
|
||
*######################################################################
|
||
* STEP 10. Same as step 9 except the memory array contains some members
|
||
* which are already initialized, like step 5.
|
||
*/
|
||
TESTING("hyperslab to hyperslab part initialized read");
|
||
|
||
/* Initialize */
|
||
for (i=0; i<NX*NY; i++) {
|
||
s5[i].a = s5[i].b = s5[i].d = s5[i].e = (unsigned)(-1);
|
||
s5[i].c[0] = s5[i].c[1] = s5[i].c[2] = s5[i].c[3] = (unsigned)(-1);
|
||
s5[i].pre = s5[i].mid1 = s5[i].mid2 = s5[i].post = (unsigned)(-1);
|
||
}
|
||
|
||
/* Read the hyperslab */
|
||
if (H5Dread (dataset, s5_tid, s8_f_sid, s8_f_sid, PRESERVE, s5)<0) {
|
||
goto error;
|
||
}
|
||
|
||
/* Compare */
|
||
for (i=0; i<NX; i++) {
|
||
for (j=0; j<NY; j++) {
|
||
s1_t *ps1 = s1 + i*NY + j;
|
||
s5_t *ps5 = s5 + i*NY + j;
|
||
if (i>=f_offset[0] &&
|
||
i<f_offset[0]+h_size[0] &&
|
||
j>=f_offset[1] &&
|
||
j<f_offset[1]+h_size[1]) {
|
||
if (ps5->pre != (unsigned)(-1) ||
|
||
ps5->a != ps1->a ||
|
||
ps5->b != ps1->b ||
|
||
ps5->mid1 != (unsigned)(-1) ||
|
||
ps5->c[0] != ps1->c[0] ||
|
||
ps5->c[1] != ps1->c[1] ||
|
||
ps5->c[2] != ps1->c[2] ||
|
||
ps5->c[3] != ps1->c[3] ||
|
||
ps5->mid2 != (unsigned)(-1) ||
|
||
ps5->d != ps1->d ||
|
||
ps5->e != ps1->e ||
|
||
ps5->post != (unsigned)(-1)) {
|
||
H5_FAILED();
|
||
puts(" Memory values clobbered");
|
||
goto error;
|
||
}
|
||
} else {
|
||
if (ps5->pre != (unsigned)(-1) ||
|
||
ps5->a != (unsigned)(-1) ||
|
||
ps5->b != (unsigned)(-1) ||
|
||
ps5->mid1 != (unsigned)(-1) ||
|
||
ps5->c[0] != (unsigned)(-1) ||
|
||
ps5->c[1] != (unsigned)(-1) ||
|
||
ps5->c[2] != (unsigned)(-1) ||
|
||
ps5->c[3] != (unsigned)(-1) ||
|
||
ps5->mid2 != (unsigned)(-1) ||
|
||
ps5->d != (unsigned)(-1) ||
|
||
ps5->e != (unsigned)(-1) ||
|
||
ps5->post != (unsigned)(-1)) {
|
||
H5_FAILED();
|
||
puts(" Incorrect values read from file");
|
||
goto error;
|
||
}
|
||
}
|
||
}
|
||
}
|
||
PASSED();
|
||
|
||
/*
|
||
*######################################################################
|
||
* Step 11: Write an array into the middle third of the dataset
|
||
* initializeing only members `b' and `d' to -1.
|
||
*/
|
||
TESTING("hyperslab part initialized write");
|
||
|
||
/* Create the memory array and initialize all fields to zero */
|
||
f_offset[0] = NX/3;
|
||
f_offset[1] = NY/3;
|
||
h_size[0] = 2*NX/3 - f_offset[0];
|
||
h_size[1] = 2*NY/3 - f_offset[1];
|
||
s11 = malloc ((size_t)h_size[0]*(size_t)h_size[1]*sizeof(s4_t));
|
||
assert (s11);
|
||
|
||
/* Initialize */
|
||
for (i=0; i<h_size[0]*h_size[1]; i++) {
|
||
s11[i].b = s11[i].d = (unsigned)(-1);
|
||
}
|
||
|
||
/* Write to disk */
|
||
if (H5Dwrite (dataset, s4_tid, s8_m_sid, s8_f_sid, PRESERVE, s11)<0) {
|
||
goto error;
|
||
}
|
||
free (s11);
|
||
s11=NULL;
|
||
|
||
/* Read the whole thing */
|
||
if (H5Dread (dataset, s1_tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, s1)<0) {
|
||
goto error;
|
||
}
|
||
|
||
/* Compare */
|
||
for (i=0; i<NX; i++) {
|
||
for (j=0; j<NY; j++) {
|
||
s1_t *ps1 = s1 + i*NY + j;
|
||
|
||
if (ps1->a != 8*(i*NY+j)+0 ||
|
||
ps1->c[0] != 8*(i*NY+j)+2 ||
|
||
ps1->c[1] != 8*(i*NY+j)+3 ||
|
||
ps1->c[2] != 8*(i*NY+j)+4 ||
|
||
ps1->c[3] != 8*(i*NY+j)+5 ||
|
||
ps1->e != 8*(i*NY+j)+7) {
|
||
H5_FAILED();
|
||
puts(" Write clobbered values");
|
||
goto error;
|
||
}
|
||
|
||
if (i>=f_offset[0] &&
|
||
i<f_offset[0]+h_size[0] &&
|
||
j>=f_offset[1] &&
|
||
j<f_offset[1]+h_size[1]) {
|
||
if (ps1->b != (unsigned)(-1) ||
|
||
ps1->d != (unsigned)(-1)) {
|
||
H5_FAILED();
|
||
puts(" Wrong values written or read");
|
||
goto error;
|
||
}
|
||
} else {
|
||
if (ps1->b != 8*(i*NY+j)+1 ||
|
||
ps1->d != 8*(i*NY+j)+6) {
|
||
H5_FAILED();
|
||
puts(" Write clobbered values");
|
||
goto error;
|
||
}
|
||
}
|
||
}
|
||
}
|
||
PASSED();
|
||
|
||
|
||
/*
|
||
* Release resources.
|
||
*/
|
||
H5Pclose (PRESERVE);
|
||
H5Dclose (dataset);
|
||
H5Fclose (file);
|
||
|
||
h5_cleanup(FILENAME, fapl);
|
||
puts("All compound dataset tests passed.");
|
||
return 0;
|
||
|
||
error:
|
||
puts("Remaining tests have been skipped.");
|
||
puts("*** DATASET TESTS FAILED ***");
|
||
return 1;
|
||
}
|