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Update Description: Added test for FPHDF5 to the testpar/ directory. If you specify --enable-fphdf5 during configuration, it'll run this test during a "make check". Platforms tested: Linux (FPHDF5 specific). Misc. update:
392 lines
13 KiB
C
392 lines
13 KiB
C
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
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* Copyright by the Board of Trustees of the University of Illinois. *
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* All rights reserved. *
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* *
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* This file is part of HDF5. The full HDF5 copyright notice, including *
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* terms governing use, modification, and redistribution, is contained in *
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* the files COPYING and Copyright.html. COPYING can be found at the root *
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* of the source code distribution tree; Copyright.html can be found at the *
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* root level of an installed copy of the electronic HDF5 document set and *
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* is linked from the top-level documents page. It can also be found at *
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* http://hdf.ncsa.uiuc.edu/HDF5/doc/Copyright.html. If you do not have *
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* access to either file, you may request a copy from hdfhelp@ncsa.uiuc.edu. *
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* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
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/*
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* Flexible Parallel HDF5 test.
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*
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* Author:
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* Bill Wendling (wendling@ncsa.uiuc.edu)
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* 20. February 2003
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*/
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#include <stdio.h>
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#include <stdlib.h>
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#include <string.h>
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#include <unistd.h>
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#include "testphdf5.h"
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#ifdef H5_HAVE_FPHDF5
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MPI_Comm SAP_Comm = MPI_COMM_NULL;
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MPI_Comm SAP_Barrier_Comm = MPI_COMM_NULL;
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static void create_file(int);
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/* FILENAME and filenames must have the same number of names */
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const char *FILENAME[2] = {
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"FPHDF5Test",
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NULL
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};
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char filenames[2][PATH_MAX];
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int nerrors = 0;
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int verbose = 0;
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hid_t fapl = -1;
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static void create_file(int sap_rank)
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{
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const char dset_3x5[] = "/dataset-3x5";
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const char dset_3x5x7[] = "/dataset-3x5x7";
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const char dset_2x4x8[] = "dataset-2x4x8";
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const char dset_5x7x11[] = "dataset-5x7x11";
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const char group_1[] = "/group-1";
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const char group_2[] = "/group-2";
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int mpi_rank, mrc;
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hid_t fid = -1, sid = -1, dataset = -1;
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mrc = MPI_Comm_rank(SAP_Comm, &mpi_rank);
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VRFY((mrc == MPI_SUCCESS), "MPI_Comm_rank");
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/*===-------------------------------------------------------------------===
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* Create the file
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*===-------------------------------------------------------------------===
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*/
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printf("%d: Creating file %s\n", mpi_rank, filenames[0]);
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fid = H5Fcreate(filenames[0], H5F_ACC_TRUNC, H5P_DEFAULT, fapl);
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VRFY((fid >= 0), "H5Fcreate");
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printf("%d: Created file %s\n", mpi_rank, filenames[0]);
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/*===-------------------------------------------------------------------===
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* Create datasets
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*===-------------------------------------------------------------------===
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*/
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if (mpi_rank == 0) {
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/* Create a dataset in the file */
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hsize_t dims[3];
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/*===---------------------------------------------------------------===
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* Create 3x5 dataset
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*===---------------------------------------------------------------===
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*/
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dims[0] = 3;
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dims[1] = 5;
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sid = H5Screate_simple(2, dims, NULL);
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VRFY((sid >= 0), "H5Screate_simple");
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printf("%d: Created simple 3x5\n", mpi_rank);
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dataset = H5Dcreate(fid, dset_3x5, H5T_NATIVE_INT, sid, H5P_DEFAULT);
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VRFY((dataset >= 0), "H5Dcreate");
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printf("%d: Created dataset 3x5 \"%s\"\n", mpi_rank, dset_3x5);
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VRFY((H5Sclose(sid) >= 0), "H5Sclose");
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VRFY((H5Dclose(dataset) >= 0), "H5Dclose");
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/*===---------------------------------------------------------------===
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* Create 3x5x7 dataset
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*===---------------------------------------------------------------===
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*/
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dims[0] = 3;
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dims[1] = 5;
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dims[2] = 7;
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sid = H5Screate_simple(3, dims, NULL);
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VRFY((sid >= 0), "H5Screate_simple");
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printf("%d: Created 3x5x7 simple\n", mpi_rank);
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dataset = H5Dcreate(fid, dset_3x5x7, H5T_NATIVE_INT, sid, H5P_DEFAULT);
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VRFY((dataset >= 0), "H5Dcreate");
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printf("%d: Created 3x5x7 dataset \"%s\"\n", mpi_rank, dset_3x5x7);
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VRFY((H5Sclose(sid) >= 0), "H5Sclose");
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VRFY((H5Dclose(dataset) >= 0), "H5Dclose");
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}
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printf("%d: MPI barrier 1.0\n", mpi_rank);
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MPI_Barrier(SAP_Barrier_Comm);
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/*===-------------------------------------------------------------------===
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* Access datasets
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*===-------------------------------------------------------------------===
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*/
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if (mpi_rank == 2) {
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hid_t xfer;
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int i, j;
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int rdata[3][5];
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/*===---------------------------------------------------------------===
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* Open 3x5 dataset and write values to it.
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*===---------------------------------------------------------------===
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*/
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for (i = 0; i < 3; ++i)
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for (j = 0; j < 5; ++j)
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rdata[i][j] = i * j + 37;
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/* See if dataset is there */
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dataset = H5Dopen(fid, dset_3x5);
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VRFY((dataset >= 0), "H5Dopen");
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printf("%d: Opened dataset \"%s\"\n", mpi_rank, dset_3x5);
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xfer = H5Pcreate(H5P_DATASET_XFER);
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VRFY((xfer >= 0), "H5Pcreate");
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mrc = H5Dwrite(dataset, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, xfer, rdata);
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VRFY((mrc >= 0), "H5Dwrite");
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printf("%d: Wrote to dataset \"%s\"\n", mpi_rank, dset_3x5);
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VRFY((H5Pclose(xfer) >= 0), "H5Pclose");
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VRFY((H5Dclose(dataset) >= 0), "H5Dclose");
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/*===---------------------------------------------------------------===
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* Open 3x5x7 dataset
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*===---------------------------------------------------------------===
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*/
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dataset = H5Dopen(fid, dset_3x5x7);
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VRFY((dataset >= 0), "H5Dopen");
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printf("%d: Opened dataset \"%s\"\n", mpi_rank, dset_3x5x7);
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VRFY((H5Dclose(dataset) >= 0), "H5Dclose");
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}
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printf("%d: MPI barrier 2.0\n", mpi_rank);
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MPI_Barrier(SAP_Barrier_Comm);
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/*===-------------------------------------------------------------------===
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* Create a group
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*===-------------------------------------------------------------------===
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*/
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if (mpi_rank == 2) {
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hid_t group;
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/*===---------------------------------------------------------------===
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* Create group "/group_1"
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*===---------------------------------------------------------------===
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*/
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printf("%d: Creating group \"%s\"\n", mpi_rank, group_1);
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group = H5Gcreate(fid, group_1, 37);
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VRFY((group >= 0), "H5Gcreate");
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printf("%d: Created group \"%s\"\n", mpi_rank, group_1);
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VRFY((H5Gclose(group) >= 0), "H5Gclose");
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}
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printf("%d: MPI barrier 3.0\n", mpi_rank);
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MPI_Barrier(SAP_Barrier_Comm);
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/*===-------------------------------------------------------------------===
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* Create another group
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*===-------------------------------------------------------------------===
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*/
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if (mpi_rank == 0) {
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hid_t group;
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/*===---------------------------------------------------------------===
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* Create group "/group_2"
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*===---------------------------------------------------------------===
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*/
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printf("%d: Creating group \"%s\"\n", mpi_rank, group_2);
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group = H5Gcreate(fid, group_2, 37);
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VRFY((group >= 0), "H5Gcreate");
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printf("%d: Created group \"%s\"\n", mpi_rank, group_2);
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VRFY((H5Gclose(group) >= 0), "H5Gclose");
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}
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printf("%d: MPI barrier 4.0\n", mpi_rank);
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MPI_Barrier(SAP_Barrier_Comm);
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/*===-------------------------------------------------------------------===
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* Access groups and co-create datasets in them
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*===-------------------------------------------------------------------===
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*/
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if (mpi_rank == 0) {
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hid_t group;
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hsize_t dims[3];
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/*===---------------------------------------------------------------===
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* Access group "/group_1"
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*===---------------------------------------------------------------===
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*/
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printf("%d: Opening group \"%s\"\n", mpi_rank, group_1);
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group = H5Gopen(fid, group_1);
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VRFY((group >= 0), "H5Gopen");
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printf("%d: Opened group \"%s\"\n", mpi_rank, group_1);
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/*===---------------------------------------------------------------===
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* Create dataset "/group_1/dset-2x4x8"
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*===---------------------------------------------------------------===
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*/
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dims[0] = 2;
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dims[1] = 4;
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dims[2] = 8;
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sid = H5Screate_simple(3, dims, NULL);
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VRFY((sid >= 0), "H5Screate_simple");
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printf("%d: Created simple 2x4x8\n", mpi_rank);
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dataset = H5Dcreate(group, dset_2x4x8, H5T_NATIVE_INT, sid, H5P_DEFAULT);
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VRFY((dataset >= 0), "H5Dcreate");
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printf("%d: Created dataset 2x4x8 \"%s\"\n", mpi_rank, dset_2x4x8);
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VRFY((H5Sclose(sid) >= 0), "H5Sclose");
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VRFY((H5Dclose(dataset) >= 0), "H5Dclose");
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VRFY((H5Gclose(group) >= 0), "H5Gclose");
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} else {
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hid_t group;
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hsize_t dims[3];
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/*===---------------------------------------------------------------===
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* Access group "/group_2"
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*===---------------------------------------------------------------===
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*/
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printf("%d: Opening group \"%s\"\n", mpi_rank, group_2);
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group = H5Gopen(fid, group_2);
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VRFY((group >= 0), "H5Gopen");
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printf("%d: Opened group \"%s\"\n", mpi_rank, group_2);
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/*===---------------------------------------------------------------===
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* Create dataset "/group_2/dset-5x7x11"
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*===---------------------------------------------------------------===
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*/
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dims[0] = 5;
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dims[1] = 7;
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dims[2] = 11;
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sid = H5Screate_simple(3, dims, NULL);
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VRFY((sid >= 0), "H5Screate_simple");
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printf("%d: Created simple 5x7x11\n", mpi_rank);
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dataset = H5Dcreate(group, dset_5x7x11, H5T_NATIVE_INT, sid, H5P_DEFAULT);
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VRFY((dataset >= 0), "H5Dcreate");
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printf("%d: Created dataset 5x7x11 \"%s\"\n", mpi_rank, dset_5x7x11);
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VRFY((H5Sclose(sid) >= 0), "H5Sclose");
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VRFY((H5Dclose(dataset) >= 0), "H5Dclose");
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VRFY((H5Gclose(group) >= 0), "H5Gclose");
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}
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printf("%d: MPI barrier 5.0\n", mpi_rank);
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MPI_Barrier(SAP_Barrier_Comm);
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done:
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if (fid > -1) {
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VRFY((H5Fclose(fid) >= 0), "H5Fclose");
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printf("%d: Closed file\n", mpi_rank);
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}
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}
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int main(int argc, char *argv[])
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{
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int mrc;
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int mpi_rank;
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int sap_rank = 1;
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int ret = EXIT_SUCCESS;
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MPI_Init(&argc, &argv);
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MPI_Comm_rank(MPI_COMM_WORLD, &mpi_rank);
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H5open();
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h5_show_hostname();
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if (MAINPROCESS) {
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printf("===================================\n");
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printf("FPHDF5 functionality tests\n");
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printf("===================================\n");
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}
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mrc = H5FPinit(MPI_COMM_WORLD, sap_rank, &SAP_Comm, &SAP_Barrier_Comm);
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VRFY((mrc == MPI_SUCCESS), "H5FP_init");
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printf("%d: Initialized FPHDF5\n", mpi_rank);
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if (mpi_rank != sap_rank) {
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/*
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* Setup the file access property list that's used to create the
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* file.
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*/
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int i;
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fapl = H5Pcreate(H5P_FILE_ACCESS);
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VRFY((fapl >= 0), "H5Pcreate");
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fprintf(stderr, "%d: Created access property list\n", mpi_rank);
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mrc = H5Pset_fapl_fphdf5(fapl, SAP_Comm, SAP_Barrier_Comm,
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MPI_INFO_NULL, (unsigned)sap_rank);
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VRFY((fapl >= 0), "H5Pset_fapl_fphdf5");
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printf("%d: Set access property list\n", mpi_rank);
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for (i = 0; i < sizeof(FILENAME) / sizeof(FILENAME[0]) - 1; ++i)
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if (h5_fixname(FILENAME[i], fapl, filenames[i], sizeof(filenames[i])) == NULL) {
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printf("h5_fixname failed\n");
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++nerrors;
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goto fail;
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}
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create_file(sap_rank);
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if (fapl > -1) {
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if (!h5_cleanup(FILENAME, fapl)) {
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printf("%d: h5_cleanup failed\n", mpi_rank);
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++nerrors;
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goto fail;
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}
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printf("%d: Closed property list\n", mpi_rank);
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}
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}
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fail:
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VRFY((H5FPfinalize() >= 0), "H5FPfinalize");
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printf("%d: H5FP finalized\n", mpi_rank);
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if (MAINPROCESS) { /* only process 0 reports */
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printf("===================================\n");
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if (nerrors)
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printf("***FPHDF5 test detected %d errors***\n", nerrors);
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else
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printf("FPHDF5 test finished with no errors\n");
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printf("===================================\n");
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}
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H5close();
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MPI_Finalize();
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return 0;
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}
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#else
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/* dummy program since FPHDF5 is not configured in */
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int
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main(int argc, char *argv[])
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{
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int mpi_rank;
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MPI_Init(&argc, &argv);
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MPI_Comm_rank(MPI_COMM_WORLD, &mpi_rank);
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if (mpi_rank == 0)
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printf("No t_fphdf5 Test because FPHDF5 is not configured in\n");
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MPI_Finalize();
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return 0;
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}
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#endif
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