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hdf5/test/objcopy.c
Quincey Koziol e6b818134e [svn-r13497] Description: 
Move ref. count of # of links to an object out of the object header's
prefix and make it a header message instead (since it's a "rare" occurence),
eliminating some more space for each object in the file.

        Inserting this "ref. count" message exposed a flaw in the library's
mechanism for locating a message to promote to another chunk and replace
with a continuation message, which required some additional work to fix.
It's still not completely robust, but it's working for more cases now and
detects failures robustly.

        Reduced the minimum size of an object header chunk to just enough to
contain a header message prefix and continuation message.

Tested on:
	FreeBSD/32 6.2 (duty)
2007-03-11 18:15:03 -05:00

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/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by The HDF Group. *
* Copyright by the Board of Trustees of the University of Illinois. *
* All rights reserved. *
* *
* This file is part of HDF5. The full HDF5 copyright notice, including *
* terms governing use, modification, and redistribution, is contained in *
* the files COPYING and Copyright.html. COPYING can be found at the root *
* of the source code distribution tree; Copyright.html can be found at the *
* root level of an installed copy of the electronic HDF5 document set and *
* is linked from the top-level documents page. It can also be found at *
* http://hdfgroup.org/HDF5/doc/Copyright.html. If you do not have *
* access to either file, you may request a copy from help@hdfgroup.org. *
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
/*
* Programmer: Peter X. Cao
* May 01, 2005
*
* Purpose: Test H5Ocopy().
*/
#include <time.h>
#include "h5test.h"
/*
* This file needs to access private information from the H5S package.
* This file also needs to access the dataspace testing code.
*/
#define H5S_PACKAGE
#define H5S_TESTING
#include "H5Spkg.h" /* Dataspaces */
#include "H5Dprivate.h" /* Datasets (for EFL property name) */
const char *FILENAME[] = {
"objcopy_src",
"objcopy_dst",
"objcopy_ext",
NULL
};
/* Configuration, really a series of bit flags. Maximum value is all three
* bit flags enabled.
*/
#define CONFIG_SHARE_SRC 1
#define CONFIG_SHARE_DST 2
#define CONFIG_NEW_FORMAT 4
#define MAX_CONFIGURATION 7
#define FILE_EXT "objcopy_ext.dat"
/* The fill_old.h5 is generated from gen_old_fill.c in HDF5 'test' directory
* for version 1.4(after 1.4.3). To get this data file, simply compile
* gen_old_fill.c with HDF5 library (before v1.5) and run it. */
#define FILE_OLD_LAYOUT "fill_old.h5"
#define NAME_DATATYPE_SIMPLE "H5T_NATIVE_INT"
#define NAME_DATATYPE_SIMPLE2 "H5T_NATIVE_INT-2"
#define NAME_DATATYPE_VL "vlen of int"
#define NAME_DATATYPE_VL_VL "vlen of vlen of int"
#define NAME_DATASET_SIMPLE "dataset_simple"
#define NAME_DATASET_COMPOUND "dataset_compound"
#define NAME_DATASET_CHUNKED "dataset_chunked"
#define NAME_DATASET_COMPACT "dataset_compact"
#define NAME_DATASET_EXTERNAL "dataset_ext"
#define NAME_DATASET_NAMED_DTYPE "dataset_named_dtype"
#define NAME_DATASET_NAMED_DTYPE2 "dataset_named_dtype2"
#define NAME_DATASET_MULTI_OHDR "dataset_multi_ohdr"
#define NAME_DATASET_MULTI_OHDR2 "dataset_multi_ohdr2"
#define NAME_DATASET_VL "dataset_vl"
#define NAME_DATASET_VL_VL "dataset_vl_vl"
#define NAME_DATASET_SUB_SUB "/g0/g00/g000/dataset_simple"
#define NAME_GROUP_UNCOPIED "/uncopied"
#define NAME_GROUP_EMPTY "/empty"
#define NAME_GROUP_TOP "/g0"
#define NAME_GROUP_SUB "/g0/g00"
#define NAME_GROUP_SUB_2 "/g0/g01"
#define NAME_GROUP_SUB_SUB "/g0/g00/g000"
#define NAME_GROUP_SUB_SUB2 "g000"
#define NAME_GROUP_DATASET "/g0/dataset_simple"
#define NAME_GROUP_LINK "/g_links"
#define NAME_GROUP_LINK2 "/g_links2"
#define NAME_GROUP_LOOP "g_loop"
#define NAME_GROUP_LOOP2 "g_loop2"
#define NAME_GROUP_LOOP3 "g_loop3"
#define NAME_GROUP_REF "ref_grp"
#define NAME_LINK_DATASET "/g_links/dataset_simple"
#define NAME_LINK_HARD "/g_links/hard_link_to_dataset_simple"
#define NAME_LINK_SOFT "/g_links/soft_link_to_dataset_simple"
#define NAME_LINK_SOFT2 "/g_links2/soft_link_to_dataset_simple"
#define NAME_LINK_EXTERN "/g_links/external_link_to_dataset_simple"
#define NAME_LINK_SOFT_DANGLE "/g_links/soft_link_to_nowhere"
#define NAME_LINK_SOFT_DANGLE2 "/g_links2/soft_link_to_nowhere"
#define NAME_OLD_FORMAT "/dset1"
#define NAME_BUF_SIZE 1024
#define NUM_ATTRIBUTES 4
#define ATTR_NAME_LEN 40
#define DIM_SIZE_1 12
#define DIM_SIZE_2 6
#define CHUNK_SIZE_1 5 /* Not an even fraction of dimension sizes, so we test copying partial chunks */
#define CHUNK_SIZE_2 5
#define NUM_SUB_GROUPS 20
#define NUM_WIDE_LOOP_GROUPS 10
#define NUM_DATASETS 10
char src_obj_full_name[215]; /* the full path + name of the object to be copied */
/* Table containing object id and object name */
/* (Used for detecting duplicate objects when comparing groups */
static struct {
size_t nalloc; /* number of slots allocated */
size_t nobjs; /* number of objects */
haddr_t *obj; /* Addresses of objects seen */
} idtab_g;
/* Local function prototypes */
static int
compare_data(hid_t parent1, hid_t parent2, hid_t pid, hid_t tid, size_t nelmts, const void *buf1, const void *buf2);
static int
compare_datasets(hid_t did, hid_t did2, hid_t pid, const void *wbuf);
static int
compare_groups(hid_t gid, hid_t gid2, hid_t pid, int depth, unsigned copy_flags);
/*-------------------------------------------------------------------------
* Function: addr_insert
*
* Purpose: Add an address to the table.
*
* Return: void
*
* Programmer: Quincey Koziol
* Saturday, November 5, 2005
*
*-------------------------------------------------------------------------
*/
static void
addr_insert(H5G_stat_t *sb)
{
size_t n;
/* Don't add it if the link count is 1 because such an object can only
* be encountered once. */
if(sb->nlink < 2)
return;
/* Extend the table */
if(idtab_g.nobjs >= idtab_g.nalloc) {
idtab_g.nalloc = MAX(256, 2*idtab_g.nalloc);
idtab_g.obj = HDrealloc(idtab_g.obj, idtab_g.nalloc * sizeof(idtab_g.obj[0]));
} /* end if */
/* Insert the entry */
n = idtab_g.nobjs++;
#if H5_SIZEOF_UINT64_T > H5_SIZEOF_LONG
idtab_g.obj[n] = (haddr_t)sb->objno[0] | ((haddr_t)sb->objno[1] << (8 * sizeof(long)));
#else
idtab_g.obj[n] = (haddr_t)sb->objno[0];
#endif
} /* end addr_insert() */
/*-------------------------------------------------------------------------
* Function: addr_lookup
*
* Purpose: Check if address has already been encountered
*
* Return: Success: TRUE/FALSE
*
* Failure: (can't fail)
*
* Programmer: Quincey Koziol
* Saturday, November 5, 2005
*
*-------------------------------------------------------------------------
*/
static hbool_t
addr_lookup(H5G_stat_t *sb)
{
haddr_t obj_addr; /* Object's address in the file */
size_t n;
if(sb->nlink<2) return FALSE; /*only one link possible*/
#if H5_SIZEOF_UINT64_T > H5_SIZEOF_LONG
obj_addr = (haddr_t)sb->objno[0] | ((haddr_t)sb->objno[1] << (8 * sizeof(long)));
#else
obj_addr = (haddr_t)sb->objno[0];
#endif
for(n = 0; n < idtab_g.nobjs; n++)
if(idtab_g.obj[n] == obj_addr)
return TRUE;
return FALSE;
} /* end addr_lookup() */
/*-------------------------------------------------------------------------
* Function: addr_reset
*
* Purpose: Reset the address tracking data structures
*
* Return: void
*
* Programmer: Quincey Koziol
* Saturday, November 5, 2005
*
*-------------------------------------------------------------------------
*/
static void
addr_reset(void)
{
if(idtab_g.obj)
HDfree(idtab_g.obj);
idtab_g.obj = NULL;
idtab_g.nalloc = idtab_g.nobjs = 0;
} /* end addr_reset() */
/*-------------------------------------------------------------------------
* Function: attach_ref_attr
*
* Purpose: Create an attribute with object references
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Peter Cao
* Friday, August 4, 2006
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
static herr_t
attach_ref_attr(hid_t file_id, hid_t loc_id)
{
char dsetname1[] = "dataset1_pointed_by_ref_attr";
char dsetname2[] = "dataset2_pointed_by_ref_attr";
hid_t did1 = (-1), did2 = (-1), aid = (-1), sid = (-1), sid_ref = (-1);
hsize_t dims[2] = {2,9};
hsize_t dims_ref[1] = {2};
hobj_ref_t ref[2];
int data1[2][9] = {{1,1,1,1,1,1,1,1,1},{1,1,1,1,1,1,1,1,18}};
int data2[2][9] = {{2,2,2,2,2,2,2,2,2},{2,2,2,2,2,2,2,2,18}};
/* creates two simple datasets */
if((sid = H5Screate_simple(2, dims, NULL)) < 0) TEST_ERROR
if((sid_ref = H5Screate_simple(1, dims_ref, NULL)) < 0) TEST_ERROR
if((did1 = H5Dcreate(file_id, dsetname1, H5T_NATIVE_INT, sid, H5P_DEFAULT)) < 0) TEST_ERROR
if(H5Dwrite(did1, H5T_NATIVE_INT, H5S_ALL , H5S_ALL, H5P_DEFAULT,data1) < 0) TEST_ERROR
if((did2 = H5Dcreate(file_id, dsetname2, H5T_NATIVE_INT, sid, H5P_DEFAULT)) < 0) TEST_ERROR
if(H5Dwrite(did2, H5T_NATIVE_INT, H5S_ALL , H5S_ALL, H5P_DEFAULT,data2) < 0) TEST_ERROR
/* create an attribute with two object references */
if(H5Rcreate(&ref[0], file_id, dsetname1, H5R_OBJECT, -1) < 0) TEST_ERROR
if(H5Rcreate(&ref[1], file_id, dsetname2, H5R_OBJECT, -1) < 0) TEST_ERROR
if((aid = H5Acreate(loc_id, "obj_ref_attr", H5T_STD_REF_OBJ, sid_ref, H5P_DEFAULT)) < 0) TEST_ERROR
if(H5Awrite(aid, H5T_STD_REF_OBJ, ref) < 0) TEST_ERROR
if(H5Sclose(sid) < 0) TEST_ERROR
if(H5Sclose(sid_ref) < 0) TEST_ERROR
if(H5Dclose(did1) < 0) TEST_ERROR
if(H5Dclose(did2) < 0) TEST_ERROR
if(H5Aclose(aid) < 0) TEST_ERROR
return 0;
error:
H5E_BEGIN_TRY {
H5Sclose(sid);
H5Sclose(sid_ref);
H5Dclose(did1);
H5Dclose(did2);
H5Pclose(aid);
} H5E_END_TRY;
return(-1);
}
/*-------------------------------------------------------------------------
* Function: attach_reg_ref_attr
*
* Purpose: Create an attribute with object references
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Peter Cao
* Monday, March 5, 2006
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
static herr_t
attach_reg_ref_attr(hid_t file_id, hid_t loc_id)
{
const char dsetnamev[] = "dataset_pointed_by_reg_ref_attr";
hid_t aid = (-1);
hid_t space_id = (-1); /* dataspace identifiers */
hid_t spacer_id = (-1); /* dataspace identifiers */
hid_t dsetv_id = (-1); /*dataset identifiers*/
hsize_t dims[2] = {2,9};
hsize_t dimsr[1] = {2};
int rank = 2;
int rankr =1;
hdset_reg_ref_t ref[2];
int data[2][9] = {{1,1,2,3,3,4,5,5,6},{1,2,2,3,4,4,5,6,6}};
hsize_t start[2];
hsize_t count[2];
hsize_t coord[3][2] = {{0, 0}, {1, 6}, {0, 8}};
size_t num_points = 3;
if((space_id = H5Screate_simple(rank, dims, NULL)) < 0) TEST_ERROR
if((spacer_id = H5Screate_simple(rankr, dimsr, NULL)) < 0) TEST_ERROR
if((dsetv_id = H5Dcreate(file_id, dsetnamev, H5T_NATIVE_INT, space_id, H5P_DEFAULT)) < 0) TEST_ERROR
if(H5Dwrite(dsetv_id, H5T_NATIVE_INT, H5S_ALL , H5S_ALL, H5P_DEFAULT,data) < 0) TEST_ERROR
start[0] = 0;
start[1] = 3;
count[0] = 2;
count[1] = 3;
if(H5Sselect_hyperslab(space_id,H5S_SELECT_SET,start,NULL,count,NULL) < 0) TEST_ERROR
if(H5Rcreate(&ref[0], file_id, dsetnamev, H5R_DATASET_REGION, space_id) < 0) TEST_ERROR
if(H5Sselect_none(space_id) < 0) TEST_ERROR
if(H5Sselect_elements(space_id, H5S_SELECT_SET, num_points, (const hsize_t **)coord) < 0) TEST_ERROR
if(H5Rcreate(&ref[1], file_id, dsetnamev, H5R_DATASET_REGION, space_id) < 0) TEST_ERROR
if((aid = H5Acreate(loc_id, "reg_ref_attr", H5T_STD_REF_DSETREG, spacer_id, H5P_DEFAULT)) < 0) TEST_ERROR
if(H5Awrite(aid, H5T_STD_REF_DSETREG, ref) < 0) TEST_ERROR
if(H5Sclose(space_id) < 0) TEST_ERROR
if(H5Dclose(dsetv_id) < 0) TEST_ERROR
if(H5Aclose(aid) < 0) TEST_ERROR
return 0;
error:
H5E_BEGIN_TRY {
H5Sclose(space_id);
H5Dclose(dsetv_id);
H5Aclose(aid);
} H5E_END_TRY;
return(-1);
}
/*-------------------------------------------------------------------------
* Function: create_reg_ref_dataset
*
* Purpose: Create a dataset with region references
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Peter Cao
* Friday, August 4, 2006
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
static herr_t
create_reg_ref_dataset(hid_t file_id, hid_t loc_id)
{
const char dsetnamev[] = "dataset_pointed_by_ref_dset";
const char dsetnamer[] = "dataset_with_reg_ref";
const char dsetnamer1[] = "compact_dataset_with_reg_ref";
const char dsetnamer2[] = "compressed_dataset_with_reg_ref";
hid_t space_id = (-1); /* dataspace identifiers */
hid_t spacer_id = (-1);
hid_t dsetv_id = (-1); /*dataset identifiers*/
hid_t dsetr_id = (-1);
hsize_t dims[2] = {2,9};
hsize_t dimsr[1] = {2};
int rank = 2;
int rankr =1;
hsize_t chunk_size=1;
hdset_reg_ref_t ref[2];
int data[2][9] = {{1,1,2,3,3,4,5,5,6},{1,2,2,3,4,4,5,6,6}};
hsize_t start[2];
hsize_t count[2];
hsize_t coord[3][2] = {{0, 0}, {1, 6}, {0, 8}};
size_t num_points = 3;
hid_t pid = (-1);
if((space_id = H5Screate_simple(rank, dims, NULL)) < 0) TEST_ERROR
if((spacer_id = H5Screate_simple(rankr, dimsr, NULL)) < 0) TEST_ERROR
if((dsetv_id = H5Dcreate(file_id, dsetnamev, H5T_NATIVE_INT, space_id, H5P_DEFAULT)) < 0) TEST_ERROR
if(H5Dwrite(dsetv_id, H5T_NATIVE_INT, H5S_ALL , H5S_ALL, H5P_DEFAULT,data) < 0) TEST_ERROR
if((dsetr_id = H5Dcreate(loc_id, dsetnamer, H5T_STD_REF_DSETREG, spacer_id, H5P_DEFAULT)) < 0) TEST_ERROR
start[0] = 0;
start[1] = 3;
count[0] = 2;
count[1] = 3;
if(H5Sselect_hyperslab(space_id,H5S_SELECT_SET,start,NULL,count,NULL) < 0) TEST_ERROR
if(H5Rcreate(&ref[0], file_id, dsetnamev, H5R_DATASET_REGION, space_id) < 0) TEST_ERROR
if(H5Sselect_none(space_id) < 0) TEST_ERROR
if(H5Sselect_elements(space_id, H5S_SELECT_SET, num_points, (const hsize_t **)coord) < 0) TEST_ERROR
if(H5Rcreate(&ref[1], file_id, dsetnamev, H5R_DATASET_REGION, space_id) < 0) TEST_ERROR
if(H5Dwrite(dsetr_id, H5T_STD_REF_DSETREG, H5S_ALL, H5S_ALL, H5P_DEFAULT,ref) < 0) TEST_ERROR
if(H5Dclose(dsetr_id) < 0) TEST_ERROR
/* create and set compact plist */
if((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR
if(H5Pset_layout(pid, H5D_COMPACT) < 0) TEST_ERROR
if((dsetr_id = H5Dcreate(loc_id, dsetnamer1, H5T_STD_REF_DSETREG, spacer_id, pid)) < 0) TEST_ERROR
if(H5Pclose(pid) < 0) TEST_ERROR
if(H5Dwrite(dsetr_id, H5T_STD_REF_DSETREG, H5S_ALL, H5S_ALL, H5P_DEFAULT, ref) < 0) TEST_ERROR
if(H5Dclose(dsetr_id) < 0) TEST_ERROR
/* create and set comp & chunk plist */
if((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR
if(H5Pset_chunk(pid, 1, &chunk_size) < 0) TEST_ERROR
if(H5Pset_deflate(pid, 9) < 0) TEST_ERROR
if((dsetr_id = H5Dcreate(loc_id, dsetnamer2, H5T_STD_REF_DSETREG, spacer_id, pid)) < 0) TEST_ERROR
if(H5Pclose(pid) < 0) TEST_ERROR
if(H5Dwrite(dsetr_id, H5T_STD_REF_DSETREG, H5S_ALL, H5S_ALL, H5P_DEFAULT,ref) < 0) TEST_ERROR
if(H5Dclose(dsetr_id) < 0) TEST_ERROR
if(H5Sclose(space_id) < 0) TEST_ERROR
if(H5Sclose(spacer_id) < 0) TEST_ERROR
if(H5Dclose(dsetv_id) < 0) TEST_ERROR
return 0;
error:
H5E_BEGIN_TRY {
H5Sclose(space_id);
H5Sclose(spacer_id);
H5Dclose(dsetr_id);
H5Dclose(dsetv_id);
H5Pclose(pid);
} H5E_END_TRY;
return(-1);
}
/*-------------------------------------------------------------------------
* Function: attach_attribute_vl
*
* Purpose: Attach an vlen attribute to the object to be copied
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Peter Cao
* Saturday, December 17, 2005
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
static int
test_copy_attach_attribute_vl(hid_t loc_id)
{
hid_t aid = -1, sid = -1, tid=-1;
hvl_t buf[4];
hsize_t dim1=4;
unsigned int i, j;
int ret_value = -1;
if((sid = H5Screate_simple(1, &dim1, NULL)) < 0 )
goto done;
if((tid = H5Tvlen_create(H5T_NATIVE_INT)) < 0)
goto done;
for(i = 0; i < 4; i++) {
buf[i].len = i*3+1;
buf[i].p = (int *)HDmalloc(buf[i].len * sizeof(int));
for(j = 0; j < buf[i].len; j++)
((int *)buf[i].p)[j] = j+1;
} /* end for */
if((aid = H5Acreate(loc_id, "vlen attribute", tid, sid, H5P_DEFAULT)) < 0)
goto done;
if(H5Awrite(aid, tid, buf) < 0)
goto done;
ret_value = 0;
done:
if(tid >0 && sid > 0)
H5Dvlen_reclaim(tid, sid, H5P_DEFAULT, buf);
if(sid > 0)
H5Sclose(sid);
if(tid > 0)
H5Tclose(tid);
if(aid > 0)
H5Aclose(aid);
return ret_value;
} /* end of attach_attribute_vl */
/*-------------------------------------------------------------------------
* Function: test_copy_attach_attributes
*
* Purpose: Attach NUM_ATTRIBUTES attributes to the object to be copied
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Peter Cao
* Friday, September 30, 2005
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
static int
test_copy_attach_attributes(hid_t loc_id, hid_t type_id)
{
hid_t aid = -1, sid = -1;
char attr_name[ATTR_NAME_LEN];
int attr_data[2], i = 0;
hsize_t dim1 = 2;
int ret_value = -1;
if((sid = H5Screate_simple(1, &dim1, NULL)) < 0 )
goto done;
for (i=0; i<NUM_ATTRIBUTES; i++) {
sprintf(attr_name, "%d attr", i);
/* Set attribute data */
attr_data[0] = 100 * i;
attr_data[1] = 200 * i;
if((aid = H5Acreate(loc_id, attr_name, type_id, sid, H5P_DEFAULT)) < 0)
goto done;
if(H5Awrite(aid, H5T_NATIVE_INT, attr_data) < 0)
goto done;
if(aid > 0)
H5Aclose(aid);
aid = -1;
}
ret_value = 0;
done:
if(sid > 0)
H5Sclose(sid);
if(aid > 0)
H5Aclose(aid);
return ret_value;
}
/*-------------------------------------------------------------------------
* Function: test_copy_attach_paired_attributes
*
* Purpose: Attach NUM_ATTRIBUTES attributes to a pair of objects to be copied
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Quincey Koziol
* Tuesday, November 1, 2005
*
*-------------------------------------------------------------------------
*/
static int
test_copy_attach_paired_attributes(hid_t loc_id, hid_t loc_id2, hid_t type_id)
{
hid_t aid = -1, sid = -1;
char attr_name[ATTR_NAME_LEN];
int attr_data[2], i;
hsize_t dim1 = 2;
if((sid = H5Screate_simple(1, &dim1, NULL)) < 0 ) goto done;
for (i=0; i<NUM_ATTRIBUTES; i++) {
sprintf(attr_name, "%d attr", i);
/* Set attribute data */
attr_data[0] = 100 * i;
attr_data[1] = 200 * i;
/* Add attribute to first object */
if((aid = H5Acreate(loc_id, attr_name, type_id, sid, H5P_DEFAULT)) < 0) goto done;
if(H5Awrite(aid, H5T_NATIVE_INT, attr_data) < 0) goto done;
if(H5Aclose(aid) < 0) goto done;
/* Add attribute to second object */
if((aid = H5Acreate(loc_id2, attr_name, type_id, sid, H5P_DEFAULT)) < 0) goto done;
if(H5Awrite(aid, H5T_NATIVE_INT, attr_data) < 0) goto done;
if(H5Aclose(aid) < 0) goto done;
}
if(H5Sclose(sid) < 0) goto done;
return 0;
done:
if(sid > 0)
H5Sclose(sid);
if(aid > 0)
H5Aclose(aid);
return -1;
} /* end test_copy_attach_paired_attributes() */
/*-------------------------------------------------------------------------
* Function: compare_attribute
*
* Purpose: Compare two attributes to check that they are equal
*
* Return: TRUE if attributes are equal/FALSE if they are different
*
* Programmer: Peter Cao
* Saturday, December 17, 2005
*
*-------------------------------------------------------------------------
*/
static int
compare_attribute(hid_t aid, hid_t aid2, hid_t pid, const void *wbuf)
{
hid_t sid = -1, sid2 = -1; /* Dataspace IDs */
hid_t tid = -1, tid2 = -1; /* Datatype IDs */
size_t elmt_size; /* Size of datatype */
htri_t is_committed; /* If the datatype is committed */
htri_t is_committed2; /* If the datatype is committed */
hssize_t nelmts; /* # of elements in dataspace */
void *rbuf = NULL; /* Buffer for reading raw data */
void *rbuf2 = NULL; /* Buffer for reading raw data */
/* Check the datatypes are equal */
/* Open the datatype for the source attribute */
if((tid = H5Aget_type(aid)) < 0) TEST_ERROR
/* Open the datatype for the destination attribute */
if((tid2 = H5Aget_type(aid2)) < 0) TEST_ERROR
/* Check that both datatypes are committed/not committed */
if((is_committed = H5Tcommitted(tid)) < 0) TEST_ERROR
if((is_committed2 = H5Tcommitted(tid2)) < 0) TEST_ERROR
if(is_committed != is_committed2) TEST_ERROR
/* Compare the datatypes */
if(H5Tequal(tid, tid2) != TRUE) TEST_ERROR
/* Determine the size of datatype (for later) */
if((elmt_size = H5Tget_size(tid)) == 0) TEST_ERROR
/* Check the dataspaces are equal */
/* Open the dataspace for the source attribute */
if((sid = H5Aget_space(aid)) < 0) TEST_ERROR
/* Open the dataspace for the destination attribute */
if((sid2 = H5Aget_space(aid2)) < 0) TEST_ERROR
/* Compare the dataspaces */
if(H5Sextent_equal(sid, sid2) != TRUE) TEST_ERROR
/* Determine the number of elements in dataspace (for later) */
if((nelmts = H5Sget_simple_extent_npoints(sid2)) < 0) TEST_ERROR
/* Check the raw data is equal */
/* Allocate & initialize space for the raw data buffers */
if((rbuf = HDcalloc( elmt_size, (size_t)nelmts)) == NULL) TEST_ERROR
if((rbuf2 = HDcalloc( elmt_size, (size_t)nelmts)) == NULL) TEST_ERROR
/* Read data from the source attribute */
if(H5Aread(aid, tid, rbuf) < 0) TEST_ERROR
/* Read data from the destination attribute */
if(H5Aread(aid2, tid2, rbuf2) < 0) TEST_ERROR
/* Check raw data read in against data written out */
if(wbuf) {
if(!compare_data(aid, 0, pid, tid, (size_t)nelmts, wbuf, rbuf)) TEST_ERROR
if(!compare_data(aid2, 0, pid, tid2, (size_t)nelmts, wbuf, rbuf2)) TEST_ERROR
} /* end if */
/* Don't have written data, just compare data between the two attributes */
else
if(!compare_data(aid, aid2, pid, tid, (size_t)nelmts, rbuf, rbuf2)) TEST_ERROR
/* Reclaim vlen data, if necessary */
if(H5Tdetect_class(tid, H5T_VLEN) == TRUE)
if(H5Dvlen_reclaim(tid, sid, H5P_DEFAULT, rbuf) < 0) TEST_ERROR
if(H5Tdetect_class(tid2, H5T_VLEN) == TRUE)
if(H5Dvlen_reclaim(tid2, sid2, H5P_DEFAULT, rbuf2) < 0) TEST_ERROR
/* Release raw data buffers */
HDfree(rbuf);
HDfree(rbuf2);
/* close the source dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
/* close the destination dataspace */
if(H5Sclose(sid2) < 0) TEST_ERROR
/* close the source datatype */
if(H5Tclose(tid) < 0) TEST_ERROR
/* close the destination datatype */
if(H5Tclose(tid2) < 0) TEST_ERROR
return TRUE;
error:
H5E_BEGIN_TRY {
if(rbuf)
HDfree(rbuf);
if(rbuf2)
HDfree(rbuf2);
H5Sclose(sid2);
H5Sclose(sid);
H5Tclose(tid2);
H5Tclose(tid);
} H5E_END_TRY;
return FALSE;
} /* end compare_attribute() */
/*-------------------------------------------------------------------------
* Function: compare_std_attributes
*
* Purpose: Compare "standard" attributes on two objects to check that they are equal
*
* Return: TRUE if objects have same attributes/FALSE if they are different
*
* Programmer: Quincey Koziol
* Monday, October 31, 2005
*
* Note: This isn't very general, the attributes are assumed to be
* those written in test_copy_attach_attributes().
*
*-------------------------------------------------------------------------
*/
static int
compare_std_attributes(hid_t oid, hid_t oid2, hid_t pid)
{
hid_t aid = -1, aid2 = -1; /* Attribute IDs */
int num_attrs; /* Number of attributes */
int num_attrs2; /* Number of attributes */
char attr_name[ATTR_NAME_LEN]; /* Attribute name */
int wattr_data[2]; /* Attribute buffer for writing */
unsigned cpy_flags; /* Object copy flags */
unsigned i; /* Local index variable */
/* Retrieve the object copy flags from the property list, if it's non-DEFAULT */
if(pid != H5P_DEFAULT) {
if(H5Pget_copy_object(pid, &cpy_flags) < 0) TEST_ERROR
} /* end if */
else
cpy_flags = 0;
/* Check the number of attributes on source dataset */
if((num_attrs = H5Aget_num_attrs(oid)) < 0) TEST_ERROR
/* Check the number of attributes on destination dataset */
if((num_attrs2 = H5Aget_num_attrs(oid2)) < 0) TEST_ERROR
if(cpy_flags & H5O_COPY_WITHOUT_ATTR_FLAG) {
/* Check that the destination has no attributes */
if(num_attrs2 != 0) TEST_ERROR
} /* end if */
else {
/* Compare the number of attributes */
if(num_attrs != num_attrs2) TEST_ERROR
/* Check the attributes are equal */
for(i = 0; i < (unsigned)num_attrs; i++) {
sprintf(attr_name, "%d attr", i);
/* Set up attribute data buffers */
wattr_data[0] = 100 * i;
wattr_data[1] = 200 * i;
/* Open the attributes */
if((aid = H5Aopen_name(oid, attr_name)) < 0) TEST_ERROR
if((aid2 = H5Aopen_name(oid2, attr_name)) < 0) TEST_ERROR
/* Check the attributes are equal */
if(!compare_attribute(aid, aid2, pid, wattr_data)) TEST_ERROR
/* Close the attributes */
if(H5Aclose(aid) < 0) TEST_ERROR
if(H5Aclose(aid2) < 0) TEST_ERROR
} /* end for */
} /* end if */
/* Objects should be the same. :-) */
return TRUE;
error:
H5E_BEGIN_TRY {
H5Aclose(aid2);
H5Aclose(aid);
} H5E_END_TRY;
return FALSE;
} /* end compare_std_attributes() */
/*-------------------------------------------------------------------------
* Function: compare_data
*
* Purpose: Compare two buffers of data to check that they are equal
*
* Return: TRUE if buffer are equal/FALSE if they are different
*
* Programmer: Quincey Koziol
* Monday, November 21, 2005
*
*-------------------------------------------------------------------------
*/
static int
compare_data(hid_t parent1, hid_t parent2, hid_t pid, hid_t tid, size_t nelmts, const void *buf1, const void *buf2)
{
size_t elmt_size; /* Size of an element */
/* Check size of each element */
if((elmt_size = H5Tget_size(tid)) == 0) TEST_ERROR
/* Check for vlen datatype */
if(H5Tdetect_class(tid, H5T_VLEN) == TRUE) {
const hvl_t *vl_buf1, *vl_buf2; /* Aliases for buffers to compare */
hid_t base_tid; /* Base type of vlen datatype */
size_t u; /* Local index variable */
/* Check for "simple" vlen datatype */
if(H5Tget_class(tid) != H5T_VLEN) TEST_ERROR
/* Get base type of vlen datatype */
if((base_tid = H5Tget_super(tid)) < 0) TEST_ERROR
/* Loop over elements in buffers */
vl_buf1 = buf1;
vl_buf2 = buf2;
for(u = 0; u < nelmts; u++, vl_buf1++, vl_buf2++) {
/* Check vlen lengths */
if(vl_buf1->len != vl_buf2->len) TEST_ERROR
/* Check vlen data */
if(!compare_data(parent1, parent2, pid, base_tid, vl_buf1->len, vl_buf1->p, vl_buf2->p)) TEST_ERROR
} /* end for */
if(H5Tclose(base_tid) < 0) TEST_ERROR
} /* end if */
else if(H5Tdetect_class(tid, H5T_REFERENCE) == TRUE) {
size_t u; /* Local index variable */
/* Check for "simple" vlen datatype */
if(H5Tget_class(tid) != H5T_REFERENCE) TEST_ERROR
/* Check for object or region reference */
if(H5Tequal(tid, H5T_STD_REF_OBJ) > 0) {
const hobj_ref_t *ref_buf1, *ref_buf2; /* Aliases for buffers to compare */
/* Loop over elements in buffers */
ref_buf1 = buf1;
ref_buf2 = buf2;
for(u = 0; u < nelmts; u++, ref_buf1++, ref_buf2++) {
hid_t obj1_id, obj2_id; /* IDs for objects referenced */
H5G_obj_t obj1_type, obj2_type; /* Types of objects referenced */
/* Check for types of objects handled */
if((obj1_type = H5Rget_obj_type(parent1, H5R_OBJECT, ref_buf1)) < 0) TEST_ERROR
if((obj2_type = H5Rget_obj_type(parent2, H5R_OBJECT, ref_buf2)) < 0) TEST_ERROR
if(obj1_type != obj2_type) TEST_ERROR
/* Open referenced objects */
if((obj1_id = H5Rdereference(parent1, H5R_OBJECT, ref_buf1)) < 0) TEST_ERROR
if((obj2_id = H5Rdereference(parent2, H5R_OBJECT, ref_buf2)) < 0) TEST_ERROR
/* Check for types of objects handled */
switch(obj1_type)
{
case H5G_DATASET:
if(compare_datasets(obj1_id, obj2_id, pid, NULL) != TRUE) TEST_ERROR
break;
case H5G_GROUP:
if(compare_groups(obj1_id, obj2_id, pid, -1, 0) != TRUE) TEST_ERROR
break;
case H5G_TYPE:
if(H5Tequal(obj1_id, obj2_id) != TRUE) TEST_ERROR
break;
default:
TEST_ERROR
} /* end switch */
/* Close objects */
if(H5Oclose(obj1_id) < 0) TEST_ERROR
if(H5Oclose(obj2_id) < 0) TEST_ERROR
} /* end for */
} /* end if */
else if(H5Tequal(tid, H5T_STD_REF_DSETREG) > 0) {
const hdset_reg_ref_t *ref_buf1, *ref_buf2; /* Aliases for buffers to compare */
/* Loop over elements in buffers */
ref_buf1 = buf1;
ref_buf2 = buf2;
for(u = 0; u < nelmts; u++, ref_buf1++, ref_buf2++) {
hid_t obj1_id, obj2_id; /* IDs for objects referenced */
hid_t obj1_sid, obj2_sid; /* Dataspace IDs for objects referenced */
H5G_obj_t obj1_type, obj2_type; /* Types of objects referenced */
/* Check for types of objects handled */
if((obj1_type = H5Rget_obj_type(parent1, H5R_DATASET_REGION, ref_buf1)) < 0) TEST_ERROR
if((obj2_type = H5Rget_obj_type(parent2, H5R_DATASET_REGION, ref_buf2)) < 0) TEST_ERROR
if(obj1_type != obj2_type) TEST_ERROR
/* Open referenced objects */
if((obj1_id = H5Rdereference(parent1, H5R_DATASET_REGION, ref_buf1)) < 0) TEST_ERROR
if((obj2_id = H5Rdereference(parent2, H5R_DATASET_REGION, ref_buf2)) < 0) TEST_ERROR
/* Check for types of objects handled */
switch(obj1_type)
{
case H5G_DATASET:
if(compare_datasets(obj1_id, obj2_id, pid, NULL) != TRUE) TEST_ERROR
break;
case H5G_GROUP:
if(compare_groups(obj1_id, obj2_id, pid, -1, 0) != TRUE) TEST_ERROR
break;
case H5G_TYPE:
if(H5Tequal(obj1_id, obj2_id) != TRUE) TEST_ERROR
break;
default:
TEST_ERROR
} /* end switch */
/* Close objects */
if(H5Oclose(obj1_id) < 0) TEST_ERROR
if(H5Oclose(obj2_id) < 0) TEST_ERROR
/* Get regions for referenced datasets */
if((obj1_sid = H5Rget_region(parent1, H5R_DATASET_REGION, ref_buf1)) < 0) TEST_ERROR
if((obj2_sid = H5Rget_region(parent2, H5R_DATASET_REGION, ref_buf2)) < 0) TEST_ERROR
/* Check if dataspaces are the same shape */
if(H5S_select_shape_same_test(obj1_sid, obj2_sid) < 0) TEST_ERROR
/* Close dataspaces */
if(H5Sclose(obj1_sid) < 0) TEST_ERROR
if(H5Sclose(obj2_sid) < 0) TEST_ERROR
} /* end for */
} /* end if */
else
TEST_ERROR
} /* end else */
else
if(HDmemcmp(buf1, buf2, (elmt_size * nelmts))) TEST_ERROR
/* Data should be the same. :-) */
return TRUE;
error:
return FALSE;
} /* end compare_data() */
/*-------------------------------------------------------------------------
* Function: compare_datasets
*
* Purpose: Compare two datasets to check that they are equal
*
* Return: TRUE if datasets are equal/FALSE if they are different
*
* Programmer: Quincey Koziol
* Tuesday, October 25, 2005
*
*-------------------------------------------------------------------------
*/
static int
compare_datasets(hid_t did, hid_t did2, hid_t pid, const void *wbuf)
{
hid_t sid = -1, sid2 = -1; /* Dataspace IDs */
hid_t tid = -1, tid2 = -1; /* Datatype IDs */
hid_t dcpl = -1, dcpl2 = -1; /* Dataset creation property list IDs */
size_t elmt_size; /* Size of datatype */
htri_t is_committed; /* If the datatype is committed */
htri_t is_committed2; /* If the datatype is committed */
int ext_count; /* Number of external files in plist */
int nfilters; /* Number of filters applied to dataset */
hssize_t nelmts; /* # of elements in dataspace */
void *rbuf = NULL; /* Buffer for reading raw data */
void *rbuf2 = NULL; /* Buffer for reading raw data */
H5D_space_status_t space_status; /* Dataset's raw data space status */
H5D_space_status_t space_status2; /* Dataset's raw data space status */
/* Check the datatypes are equal */
/* Open the datatype for the source dataset */
if((tid = H5Dget_type(did)) < 0) TEST_ERROR
/* Open the datatype for the destination dataset */
if((tid2 = H5Dget_type(did2)) < 0) TEST_ERROR
/* Check that both datatypes are committed/not committed */
if((is_committed = H5Tcommitted(tid)) < 0) TEST_ERROR
if((is_committed2 = H5Tcommitted(tid2)) < 0) TEST_ERROR
if(is_committed != is_committed2) TEST_ERROR
/* Compare the datatypes */
if(H5Tequal(tid, tid2) != TRUE) TEST_ERROR
/* Determine the size of datatype (for later) */
if((elmt_size = H5Tget_size(tid)) == 0) TEST_ERROR
/* Check the dataspaces are equal */
/* Open the dataspace for the source dataset */
if((sid = H5Dget_space(did)) < 0) TEST_ERROR
/* Open the dataspace for the destination dataset */
if((sid2 = H5Dget_space(did2)) < 0) TEST_ERROR
/* Compare the dataspaces */
if(H5Sextent_equal(sid, sid2) != TRUE) TEST_ERROR
/* Determine the number of elements in dataspace (for later) */
if((nelmts = H5Sget_simple_extent_npoints(sid)) < 0) TEST_ERROR
/* Check the dataset creation property lists are equal */
/* Open the dataset creation property list for the source dataset */
if((dcpl = H5Dget_create_plist(did)) < 0) TEST_ERROR
/* Open the dataset creation property list for the destination dataset */
if((dcpl2 = H5Dget_create_plist(did2)) < 0) TEST_ERROR
/* If external file storage is being used, the value stored in the
* dcpl will be a heap ID, which is not guaranteed to be the same in
* source and destination files.
* Instead, compare the actual external file values and then
* delete this property from the dcpls before comparing them.
*/
if((ext_count = H5Pget_external_count(dcpl)) < 0) TEST_ERROR
if(ext_count > 0)
{
unsigned x; /* Counter varaible */
char name1[NAME_BUF_SIZE];
char name2[NAME_BUF_SIZE];
off_t offset1=0;
off_t offset2=0;
hsize_t size1=0;
hsize_t size2=0;
if(H5Pget_external_count(dcpl2) != ext_count) TEST_ERROR
/* Ensure that all external file information is the same */
for(x=0; x < (unsigned) ext_count; ++x)
{
if(H5Pget_external(dcpl, x, NAME_BUF_SIZE, name1, &offset1, &size1) < 0) TEST_ERROR
if(H5Pget_external(dcpl2, x, NAME_BUF_SIZE, name2, &offset2, &size2) < 0) TEST_ERROR
if(offset1 != offset2) TEST_ERROR
if(size1 != size2) TEST_ERROR
if(strcmp(name1, name2) != 0) TEST_ERROR
}
/* Remove external file information from the dcpls */
if(H5Premove(dcpl, H5D_CRT_EXT_FILE_LIST_NAME) < 0) TEST_ERROR
if(H5Premove(dcpl2, H5D_CRT_EXT_FILE_LIST_NAME) < 0) TEST_ERROR
}
/* Compare the rest of the dataset creation property lists */
if(H5Pequal(dcpl, dcpl2) != TRUE) TEST_ERROR
/* Get the number of filters on dataset */
if((nfilters = H5Pget_nfilters(dcpl)) < 0) TEST_ERROR
/* close the source dataset creation property list */
if(H5Pclose(dcpl) < 0) TEST_ERROR
/* close the destination dataset creation property list */
if(H5Pclose(dcpl2) < 0) TEST_ERROR
/* Check the allocated storage is the same */
/* Check that the space allocation status is the same */
if(H5Dget_space_status(did, &space_status) < 0) TEST_ERROR
if(H5Dget_space_status(did2, &space_status2) < 0) TEST_ERROR
if(space_status != space_status2) TEST_ERROR
/* Check that the space used is the same */
/* (Don't check if the dataset is filtered (i.e. compressed, etc.) and
* the datatype is VLEN, since the addresses for the vlen
* data in each dataset will (probably) be different and the storage
* size will thus vary)
*/
if(!(nfilters > 0 && H5Tdetect_class(tid, H5T_VLEN))) {
hsize_t storage_size = H5Dget_storage_size(did); /* Dataset's raw data storage size */
hsize_t storage_size2 = H5Dget_storage_size(did2); /* 2nd Dataset's raw data storage size */
if(storage_size != storage_size2) TEST_ERROR
} /* end if */
/* Check the raw data is equal */
/* Allocate & initialize space for the raw data buffers */
if((rbuf = HDcalloc( elmt_size, (size_t)nelmts)) == NULL) TEST_ERROR
if((rbuf2 = HDcalloc( elmt_size, (size_t)nelmts)) == NULL) TEST_ERROR
/* Read data from datasets */
if(H5Dread(did, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, rbuf) < 0) TEST_ERROR
if(H5Dread(did2, tid2, H5S_ALL, H5S_ALL, H5P_DEFAULT, rbuf2) < 0) TEST_ERROR
/* Check raw data read in against data written out */
if(wbuf) {
if(!compare_data(did, 0, pid, tid, (size_t)nelmts, wbuf, rbuf)) TEST_ERROR
if(!compare_data(did2, 0, pid, tid2, (size_t)nelmts, wbuf, rbuf2)) TEST_ERROR
} /* end if */
/* Don't have written data, just compare data between the two datasets */
else
if(!compare_data(did, did2, pid, tid, (size_t)nelmts, rbuf, rbuf2)) TEST_ERROR
/* Reclaim vlen data, if necessary */
if(H5Tdetect_class(tid, H5T_VLEN) == TRUE)
if(H5Dvlen_reclaim(tid, sid, H5P_DEFAULT, rbuf) < 0) TEST_ERROR
if(H5Tdetect_class(tid2, H5T_VLEN) == TRUE)
if(H5Dvlen_reclaim(tid2, sid2, H5P_DEFAULT, rbuf2) < 0) TEST_ERROR
/* Release raw data buffers */
HDfree(rbuf);
HDfree(rbuf2);
/* close the source dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
/* close the destination dataspace */
if(H5Sclose(sid2) < 0) TEST_ERROR
/* close the source datatype */
if(H5Tclose(tid) < 0) TEST_ERROR
/* close the destination datatype */
if(H5Tclose(tid2) < 0) TEST_ERROR
/* Check if the attributes are equal */
if(compare_std_attributes(did, did2, pid) != TRUE) TEST_ERROR
/* Datasets should be the same. :-) */
return TRUE;
error:
H5E_BEGIN_TRY {
if(rbuf)
HDfree(rbuf);
if(rbuf2)
HDfree(rbuf2);
H5Pclose(dcpl2);
H5Pclose(dcpl);
H5Sclose(sid2);
H5Sclose(sid);
H5Tclose(tid2);
H5Tclose(tid);
} H5E_END_TRY;
return FALSE;
} /* end compare_datasets() */
/*-------------------------------------------------------------------------
* Function: compare_groups
*
* Purpose: Compare two groups to check that they are "equal"
*
* Return: TRUE if group are equal/FALSE if they are different
*
* Programmer: Quincey Koziol
* Monday, October 31, 2005
*
*-------------------------------------------------------------------------
*/
static int
compare_groups(hid_t gid, hid_t gid2, hid_t pid, int depth, unsigned copy_flags)
{
hsize_t num_objs; /* Number of objects in group */
hsize_t num_objs2; /* Number of objects in group */
hsize_t idx; /* Index over the objects in group */
unsigned cpy_flags; /* Object copy flags */
/* Retrieve the object copy flags from the property list, if it's non-DEFAULT */
if(pid != H5P_DEFAULT) {
if(H5Pget_copy_object(pid, &cpy_flags) < 0) TEST_ERROR
} /* end if */
else
cpy_flags = 0;
/* Check if both groups have the same # of objects */
if(H5Gget_num_objs(gid, &num_objs) < 0) TEST_ERROR
if(H5Gget_num_objs(gid2, &num_objs2) < 0) TEST_ERROR
if((cpy_flags & H5O_COPY_SHALLOW_HIERARCHY_FLAG) && depth == 0) {
if(num_objs2 != 0) TEST_ERROR
} /* end if */
else {
if(num_objs != num_objs2) TEST_ERROR
} /* end if */
/* Check contents of groups */
if(num_objs2 > 0) {
char objname[NAME_BUF_SIZE]; /* Name of object in group */
char objname2[NAME_BUF_SIZE]; /* Name of object in group */
H5G_obj_t objtype; /* Type of object in group */
H5G_obj_t objtype2; /* Type of object in group */
H5G_stat_t objstat; /* Object info */
H5G_stat_t objstat2; /* Object info */
H5L_info_t linfo; /* Link information */
H5L_info_t linfo2; /* Link information */
hid_t oid, oid2; /* IDs of objects within group */
/* Loop over contents of groups */
for(idx = 0; idx < num_objs; idx++) {
/* Check name of objects */
if(H5Gget_objname_by_idx(gid, idx, objname, (size_t)NAME_BUF_SIZE) < 0) TEST_ERROR
if(H5Gget_objname_by_idx(gid2, idx, objname2, (size_t)NAME_BUF_SIZE) < 0) TEST_ERROR
if(HDstrcmp(objname, objname2)) TEST_ERROR
/* Check type of objects */
if((objtype = H5Gget_objtype_by_idx(gid, idx)) < 0) TEST_ERROR
if((objtype2 = H5Gget_objtype_by_idx(gid2, idx)) < 0) TEST_ERROR
if(objtype != objtype2) TEST_ERROR
/* Compare some pieces of the H5G_stat_t */
if(H5Gget_objinfo(gid, objname, FALSE, &objstat) < 0) TEST_ERROR
if(H5Gget_objinfo(gid2, objname2, FALSE, &objstat2) < 0) TEST_ERROR
if(objstat.type != objstat2.type) TEST_ERROR
if(objstat.type != H5G_LINK && objstat.type != H5G_UDLINK) {
if(objstat.nlink != objstat2.nlink) TEST_ERROR
/* If NULL messages are preserved, the number of messages
* should be the same in the destination.
* Otherwise, it should simply be true that the number
* of messages hasn't increased.
*/
if(H5O_COPY_PRESERVE_NULL_FLAG & copy_flags) {
if(objstat.ohdr.nmesgs != objstat2.ohdr.nmesgs)
;
else
if(objstat.ohdr.nmesgs < objstat2.ohdr.nmesgs) TEST_ERROR
}
} /* end if */
/* Get link info */
if(H5Lget_info(gid, objname, &linfo, H5P_DEFAULT) < 0) TEST_ERROR
if(H5Lget_info(gid2, objname2, &linfo2, H5P_DEFAULT) < 0) TEST_ERROR
/* Check for object already having been compared */
if(addr_lookup(&objstat))
continue;
else
addr_insert(&objstat);
/* Compare objects within group */
switch(objtype) {
case H5G_LINK:
{
char linkname[NAME_BUF_SIZE]; /* Link value */
char linkname2[NAME_BUF_SIZE]; /* Link value */
/* Check link values */
if(H5Lget_val(gid, objname, linkname, (size_t)NAME_BUF_SIZE, H5P_DEFAULT) < 0) TEST_ERROR
if(H5Lget_val(gid2, objname2, linkname2, (size_t)NAME_BUF_SIZE, H5P_DEFAULT) < 0) TEST_ERROR
if(HDstrcmp(linkname, linkname2)) TEST_ERROR
}
break;
case H5G_GROUP:
/* Open groups */
if((oid = H5Gopen(gid, objname)) < 0) TEST_ERROR
if((oid2 = H5Gopen(gid2, objname2)) < 0) TEST_ERROR
/* Compare groups */
if(compare_groups(oid, oid2, pid, depth - 1, copy_flags) != TRUE) TEST_ERROR
/* Close groups */
if(H5Gclose(oid) < 0) TEST_ERROR
if(H5Gclose(oid2) < 0) TEST_ERROR
break;
case H5G_DATASET:
/* Open datasets */
if((oid = H5Dopen(gid, objname)) < 0) TEST_ERROR
if((oid2 = H5Dopen(gid2, objname2)) < 0) TEST_ERROR
/* Compare datasets */
if(compare_datasets(oid, oid2, pid, NULL) != TRUE) TEST_ERROR
/* Close datasets */
if(H5Dclose(oid) < 0) TEST_ERROR
if(H5Dclose(oid2) < 0) TEST_ERROR
break;
case H5G_TYPE:
/* Open datatypes */
if((oid = H5Topen(gid, objname)) < 0) TEST_ERROR
if((oid2 = H5Topen(gid2, objname2)) < 0) TEST_ERROR
/* Compare datatypes */
if(H5Tequal(oid, oid2) != TRUE) TEST_ERROR
/* Close datatypes */
if(H5Tclose(oid) < 0) TEST_ERROR
if(H5Tclose(oid2) < 0) TEST_ERROR
break;
case H5G_UDLINK:
{
char linkval[NAME_BUF_SIZE]; /* Link value */
char linkval2[NAME_BUF_SIZE]; /* Link value */
/* Check that both links are the same type and the same size */
if(linfo.type != linfo2.type) TEST_ERROR
if(linfo.u.val_size != linfo2.u.val_size) TEST_ERROR
/* Get link udata */
if(H5Lget_val(gid, objname, linkval, (size_t)NAME_BUF_SIZE, H5P_DEFAULT) < 0) TEST_ERROR
if(H5Lget_val(gid2, objname2, linkval2, (size_t)NAME_BUF_SIZE, H5P_DEFAULT) < 0) TEST_ERROR
/* Compare link udata */
if(HDmemcmp(linkval, linkval2, objstat.linklen)) TEST_ERROR
}
break;
default:
HDassert(0 && "Unknown type of object");
break;
} /* end switch */
} /* end for */
} /* end if */
/* Check if the attributes are equal */
/* (don't check standard attributes when testing expanding references) */
if(!(cpy_flags & H5O_COPY_EXPAND_REFERENCE_FLAG))
if(compare_std_attributes(gid, gid2, pid) != TRUE) TEST_ERROR
/* Groups should be the same. :-) */
return TRUE;
error:
H5E_BEGIN_TRY {
} H5E_END_TRY;
return FALSE;
} /* end compare_groups() */
/*-------------------------------------------------------------------------
* Function: test_copy_named_datatype
*
* Purpose: Create name datatype in SRC file and copy it to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Peter Cao
* Friday, September 30, 2005
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
static int
test_copy_named_datatype(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t tid = -1, tid2 = -1; /* Datatype IDs */
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): named datatype");
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* create datatype */
if((tid = H5Tcopy(H5T_NATIVE_INT)) < 0) TEST_ERROR
/* create named datatype */
if((H5Tcommit(fid_src, NAME_DATATYPE_SIMPLE, tid)) < 0) TEST_ERROR
/* close the datatype */
if(H5Tclose(tid) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate(fid_dst, NAME_GROUP_UNCOPIED, (size_t)0)) < 0) TEST_ERROR
/* copy the datatype from SRC to DST */
if(H5Ocopy(fid_src, NAME_DATATYPE_SIMPLE, fid_dst, NAME_DATATYPE_SIMPLE, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the datatype for copy */
if((tid = H5Topen(fid_src, NAME_DATATYPE_SIMPLE)) < 0) TEST_ERROR
/* open the copied datatype */
if((tid2 = H5Topen(fid_dst, NAME_DATATYPE_SIMPLE)) < 0) TEST_ERROR
/* Compare the datatypes */
if(H5Tequal(tid, tid2) != TRUE) TEST_ERROR
/* close the destination datatype */
if(H5Tclose(tid2) < 0) TEST_ERROR
/* close the source datatype */
if(H5Tclose(tid) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Tclose(tid2);
H5Tclose(tid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_named_datatype */
/*-------------------------------------------------------------------------
* Function: test_copy_named_datatype_vl
*
* Purpose: Create name vlen datatype in SRC file and copy it to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Quincey Koziol
* Tuesday, November 22, 2005
*
*-------------------------------------------------------------------------
*/
static int
test_copy_named_datatype_vl(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t tid = -1, tid2 = -1; /* Datatype IDs */
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): named vlen datatype");
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* create datatype */
if((tid = H5Tvlen_create(H5T_NATIVE_INT)) < 0) TEST_ERROR
/* create named datatype */
if((H5Tcommit(fid_src, NAME_DATATYPE_VL, tid)) < 0) TEST_ERROR
/* close the datatype */
if(H5Tclose(tid) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate(fid_dst, NAME_GROUP_UNCOPIED, (size_t)0)) < 0) TEST_ERROR
/* copy the datatype from SRC to DST */
if(H5Ocopy(fid_src, NAME_DATATYPE_VL, fid_dst, NAME_DATATYPE_VL, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the datatype for copy */
if((tid = H5Topen(fid_src, NAME_DATATYPE_VL)) < 0) TEST_ERROR
/* open the copied datatype */
if((tid2 = H5Topen(fid_dst, NAME_DATATYPE_VL)) < 0) TEST_ERROR
/* Compare the datatypes */
if(H5Tequal(tid, tid2) != TRUE) TEST_ERROR
/* close the destination datatype */
if(H5Tclose(tid2) < 0) TEST_ERROR
/* close the source datatype */
if(H5Tclose(tid) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Tclose(tid2);
H5Tclose(tid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_named_datatype_vl */
/*-------------------------------------------------------------------------
* Function: test_copy_named_datatype_vl_vl
*
* Purpose: Create named vlen of vlen datatype in SRC file and copy it to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Quincey Koziol
* Tuesday, November 22, 2005
*
*-------------------------------------------------------------------------
*/
static int
test_copy_named_datatype_vl_vl(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t tid = -1, tid2 = -1; /* Datatype IDs */
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): named nested vlen datatype");
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* create first vlen datatype */
if((tid = H5Tvlen_create(H5T_NATIVE_INT)) < 0) TEST_ERROR
/* create second (nested) vlen datatype */
if((tid2 = H5Tvlen_create(tid)) < 0) TEST_ERROR
/* create named datatype */
if((H5Tcommit(fid_src, NAME_DATATYPE_VL_VL, tid2)) < 0) TEST_ERROR
/* close the first datatype */
if(H5Tclose(tid) < 0) TEST_ERROR
/* close the second datatype */
if(H5Tclose(tid2) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate(fid_dst, NAME_GROUP_UNCOPIED, (size_t)0)) < 0) TEST_ERROR
/* copy the datatype from SRC to DST */
if(H5Ocopy(fid_src, NAME_DATATYPE_VL_VL, fid_dst, NAME_DATATYPE_VL_VL, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the datatype for copy */
if((tid = H5Topen(fid_src, NAME_DATATYPE_VL_VL)) < 0) TEST_ERROR
/* open the copied datatype */
if((tid2 = H5Topen(fid_dst, NAME_DATATYPE_VL_VL)) < 0) TEST_ERROR
/* Compare the datatypes */
if(H5Tequal(tid, tid2) != TRUE) TEST_ERROR
/* close the destination datatype */
if(H5Tclose(tid2) < 0) TEST_ERROR
/* close the source datatype */
if(H5Tclose(tid) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Tclose(tid2);
H5Tclose(tid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_named_datatype_vl */
/*-------------------------------------------------------------------------
* Function: test_copy_dataset_simple
*
* Purpose: Create a simple dataset in SRC file and copy it to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Peter Cao
* Friday, September 30, 2005
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
static int
test_copy_dataset_simple(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t sid = -1; /* Dataspace ID */
hid_t did = -1, did2 = -1; /* Dataset IDs */
int buf[DIM_SIZE_1][DIM_SIZE_2]; /* Buffer for writing data */
hsize_t dim2d[2]; /* Dataset dimensions */
int i, j; /* local index variables */
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): simple dataset");
/* Initialize write buffer */
for (i=0; i<DIM_SIZE_1; i++)
for (j=0; j<DIM_SIZE_2; j++)
buf[i][j] = 10000 + 100*i+j;
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim2d[0] = DIM_SIZE_1;
dim2d[1] = DIM_SIZE_2;
/* create 2D dataspace */
if((sid = H5Screate_simple(2, dim2d, NULL)) < 0) TEST_ERROR
/* create 2D int dataset at SRC file */
if((did = H5Dcreate(fid_src, NAME_DATASET_SIMPLE, H5T_NATIVE_INT, sid, H5P_DEFAULT)) < 0) TEST_ERROR
/* write data into file */
if(H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
/* attach attributes to the dataset */
if(test_copy_attach_attributes(did, H5T_NATIVE_INT) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate(fid_dst, NAME_GROUP_UNCOPIED, (size_t)0)) < 0) TEST_ERROR
/* copy the dataset from SRC to DST */
if(H5Ocopy(fid_src, NAME_DATASET_SIMPLE, fid_dst, NAME_DATASET_SIMPLE, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the dataset for copy */
if((did = H5Dopen(fid_src, NAME_DATASET_SIMPLE)) < 0) TEST_ERROR
/* open the destination dataset */
if((did2 = H5Dopen(fid_dst, NAME_DATASET_SIMPLE)) < 0) TEST_ERROR
/* Check if the datasets are equal */
if(compare_datasets(did, did2, H5P_DEFAULT, buf) != TRUE) TEST_ERROR
/* close the destination dataset */
if(H5Dclose(did2) < 0) TEST_ERROR
/* close the source dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Dclose(did2);
H5Dclose(did);
H5Sclose(sid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_dataset_simple */
/*-------------------------------------------------------------------------
* Function: test_copy_dataset_simple_empty
*
* Purpose: Create a simple dataset in SRC file and copy it to DST file
* (Note: dataset has no data)
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Quincey Koziol
* Monday, October 31, 2005
*
*-------------------------------------------------------------------------
*/
static int
test_copy_dataset_simple_empty(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t sid = -1; /* Dataspace ID */
hid_t did = -1, did2 = -1; /* Dataset IDs */
hsize_t dim2d[2]; /* Dataset dimensions */
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): empty contiguous dataset");
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim2d[0] = DIM_SIZE_1;
dim2d[1] = DIM_SIZE_2;
/* create 2D dataspace */
if((sid = H5Screate_simple(2, dim2d, NULL)) < 0) TEST_ERROR
/* create 2D int dataset at SRC file */
if((did = H5Dcreate(fid_src, NAME_DATASET_SIMPLE, H5T_NATIVE_INT, sid, H5P_DEFAULT)) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
/* attach attributes to the dataset */
if(test_copy_attach_attributes(did, H5T_NATIVE_INT) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate(fid_dst, NAME_GROUP_UNCOPIED, (size_t)0)) < 0) TEST_ERROR
/* copy the dataset from SRC to DST */
if(H5Ocopy(fid_src, NAME_DATASET_SIMPLE, fid_dst, NAME_DATASET_SIMPLE, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the dataset for copy */
if((did = H5Dopen(fid_src, NAME_DATASET_SIMPLE)) < 0) TEST_ERROR
/* open the destination dataset */
if((did2 = H5Dopen(fid_dst, NAME_DATASET_SIMPLE)) < 0) TEST_ERROR
/* Check if the datasets are equal */
if(compare_datasets(did, did2, H5P_DEFAULT, NULL) != TRUE) TEST_ERROR
/* close the destination dataset */
if(H5Dclose(did2) < 0) TEST_ERROR
/* close the source dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Dclose(did2);
H5Dclose(did);
H5Sclose(sid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_dataset_simple_empty */
/*-------------------------------------------------------------------------
* Function: test_copy_dataset_compound
*
* Purpose: Create a compound dataset in SRC file and copy it to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Peter Cao
* Friday, September 30, 2005
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
static int
test_copy_dataset_compound(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t sid = -1; /* Dataspace ID */
hid_t tid = -1; /* Datatype ID */
hid_t did = -1, did2 = -1; /* Dataset IDs */
hsize_t dim1d[1]; /* Dataset dimensions */
typedef struct comp_t {
int a;
double d;
} comp_t;
comp_t buf[DIM_SIZE_1]; /* Buffer for writing data */
int i; /* Local index variable */
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): compound dataset");
for (i=0; i<DIM_SIZE_1; i++) {
buf[i].a = i;
buf[i].d = 1./(i+1);
}
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim1d[0] = DIM_SIZE_1;
/* create dataspace */
if((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR
/* create datatype */
if((tid = H5Tcreate (H5T_COMPOUND, sizeof(comp_t))) < 0) TEST_ERROR
if(H5Tinsert(tid, "int_name", HOFFSET(comp_t, a), H5T_NATIVE_INT) < 0) TEST_ERROR
if(H5Tinsert(tid, "double_name", HOFFSET(comp_t, d), H5T_NATIVE_DOUBLE) < 0) TEST_ERROR
/* create dataset */
if((did = H5Dcreate(fid_src, NAME_DATASET_COMPOUND, tid, sid, H5P_DEFAULT)) < 0) TEST_ERROR
/* write data into file */
if(H5Dwrite(did, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
/* close datatype */
if(H5Tclose(tid) < 0) TEST_ERROR
/* attach attributes to the dataset */
if(test_copy_attach_attributes(did, H5T_NATIVE_INT) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate(fid_dst, NAME_GROUP_UNCOPIED, (size_t)0)) < 0) TEST_ERROR
/* copy the dataset from SRC to DST */
if(H5Ocopy(fid_src, NAME_DATASET_COMPOUND, fid_dst, NAME_DATASET_COMPOUND, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the dataset for copy */
if((did = H5Dopen(fid_src, NAME_DATASET_COMPOUND)) < 0) TEST_ERROR
/* open the destination dataset */
if((did2 = H5Dopen(fid_dst, NAME_DATASET_COMPOUND)) < 0) TEST_ERROR
/* Check if the datasets are equal */
if(compare_datasets(did, did2, H5P_DEFAULT, buf) != TRUE) TEST_ERROR
/* close the destination dataset */
if(H5Dclose(did2) < 0) TEST_ERROR
/* close the source dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Dclose(did2);
H5Dclose(did);
H5Tclose(tid);
H5Sclose(sid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_dataset_compound */
/*-------------------------------------------------------------------------
* Function: test_copy_dataset_chunked
*
* Purpose: Create a chunked dataset in SRC file and copy it to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Peter Cao
* Friday, September 30, 2005
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
static int
test_copy_dataset_chunked(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t sid = -1; /* Dataspace ID */
hid_t pid = -1; /* Dataset creation property list ID */
hid_t did = -1, did2 = -1; /* Dataset IDs */
hsize_t dim2d[2]; /* Dataset dimensions */
hsize_t chunk_dim2d[2] ={CHUNK_SIZE_1, CHUNK_SIZE_2}; /* Chunk dimensions */
float buf[DIM_SIZE_1][DIM_SIZE_2]; /* Buffer for writing data */
int i, j; /* Local index variables */
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): chunked dataset");
/* set initial data values */
for (i=0; i<DIM_SIZE_1; i++)
for (j=0; j<DIM_SIZE_2; j++)
buf[i][j] = (float)(i+j/100.0);
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim2d[0]=DIM_SIZE_1;
dim2d[1]=DIM_SIZE_2;
/* create dataspace */
if((sid = H5Screate_simple(2, dim2d, NULL)) < 0) TEST_ERROR
/* create and set chunk plist */
if((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR
if(H5Pset_chunk(pid, 2, chunk_dim2d) < 0) TEST_ERROR
/* create dataset */
if((did = H5Dcreate(fid_src, NAME_DATASET_CHUNKED, H5T_NATIVE_FLOAT, sid, pid)) < 0) TEST_ERROR
/* close chunk plist */
if(H5Pclose(pid) < 0) TEST_ERROR
/* write data into file */
if(H5Dwrite(did, H5T_NATIVE_FLOAT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
/* attach attributes to the dataset */
if(test_copy_attach_attributes(did, H5T_NATIVE_INT) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate(fid_dst, NAME_GROUP_UNCOPIED, (size_t)0)) < 0) TEST_ERROR
/* copy the dataset from SRC to DST */
if(H5Ocopy(fid_src, NAME_DATASET_CHUNKED, fid_dst, NAME_DATASET_CHUNKED, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the dataset for copy */
if((did = H5Dopen(fid_src, NAME_DATASET_CHUNKED)) < 0) TEST_ERROR
/* open the destination dataset */
if((did2 = H5Dopen(fid_dst, NAME_DATASET_CHUNKED)) < 0) TEST_ERROR
/* Check if the datasets are equal */
if(compare_datasets(did, did2, H5P_DEFAULT, buf) != TRUE) TEST_ERROR
/* close the destination dataset */
if(H5Dclose(did2) < 0) TEST_ERROR
/* close the source dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Dclose(did2);
H5Dclose(did);
H5Pclose(pid);
H5Sclose(sid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_dataset_chunked */
/*-------------------------------------------------------------------------
* Function: test_copy_dataset_chunked_empty
*
* Purpose: Create a chunked dataset in SRC file and copy it to DST file
* (Note: dataset has no data)
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Quincey Koziol
* Monday, October 31, 2005
*
*-------------------------------------------------------------------------
*/
static int
test_copy_dataset_chunked_empty(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t sid = -1; /* Dataspace ID */
hid_t pid = -1; /* Dataset creation property list ID */
hid_t did = -1, did2 = -1; /* Dataset IDs */
hsize_t dim2d[2]; /* Dataset dimensions */
hsize_t chunk_dim2d[2] ={CHUNK_SIZE_1, CHUNK_SIZE_2}; /* Chunk dimensions */
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): empty chunked dataset");
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim2d[0]=DIM_SIZE_1;
dim2d[1]=DIM_SIZE_2;
/* create dataspace */
if((sid = H5Screate_simple(2, dim2d, NULL)) < 0) TEST_ERROR
/* create and set chunk plist */
if((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR
if(H5Pset_chunk(pid, 2, chunk_dim2d) < 0) TEST_ERROR
/* create dataset */
if((did = H5Dcreate(fid_src, NAME_DATASET_CHUNKED, H5T_NATIVE_FLOAT, sid, pid)) < 0) TEST_ERROR
/* close chunk plist */
if(H5Pclose(pid) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
/* attach attributes to the dataset */
if(test_copy_attach_attributes(did, H5T_NATIVE_INT) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate(fid_dst, NAME_GROUP_UNCOPIED, (size_t)0)) < 0) TEST_ERROR
/* copy the dataset from SRC to DST */
if(H5Ocopy(fid_src, NAME_DATASET_CHUNKED, fid_dst, NAME_DATASET_CHUNKED, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the dataset for copy */
if((did = H5Dopen(fid_src, NAME_DATASET_CHUNKED)) < 0) TEST_ERROR
/* open the destination dataset */
if((did2 = H5Dopen(fid_dst, NAME_DATASET_CHUNKED)) < 0) TEST_ERROR
/* Check if the datasets are equal */
if(compare_datasets(did, did2, H5P_DEFAULT, NULL) != TRUE) TEST_ERROR
/* close the destination dataset */
if(H5Dclose(did2) < 0) TEST_ERROR
/* close the source dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Dclose(did2);
H5Dclose(did);
H5Pclose(pid);
H5Sclose(sid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_dataset_chunked_empty */
/*-------------------------------------------------------------------------
* Function: test_copy_dataset_chunked_sparse
*
* Purpose: Create a chunked dataset with unlimited dimensions and un-written
* chunks in SRC file and copy it to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Quincey Koziol
* Monday, October 31, 2005
*
*-------------------------------------------------------------------------
*/
static int
test_copy_dataset_chunked_sparse(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t sid = -1; /* Dataspace ID */
hid_t pid = -1; /* Dataset creation property list ID */
hid_t did = -1, did2 = -1; /* Dataset IDs */
hsize_t dim2d[2]; /* Dataset dimensions */
hsize_t new_dim2d[2]; /* Dataset dimensions */
hsize_t max_dim2d[2]; /* Dataset max. dimensions */
hsize_t chunk_dim2d[2] ={CHUNK_SIZE_1, CHUNK_SIZE_2}; /* Chunk dimensions */
float buf[DIM_SIZE_1][DIM_SIZE_2]; /* Buffer for writing data */
int i, j; /* Local index variables */
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): sparse dataset");
/* set initial data values */
for (i=0; i<DIM_SIZE_1; i++)
for (j=0; j<DIM_SIZE_2; j++)
buf[i][j] = (float)(i+j/100.0);
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim2d[0]=DIM_SIZE_1;
dim2d[1]=DIM_SIZE_2;
max_dim2d[0]=H5S_UNLIMITED;
max_dim2d[1]=H5S_UNLIMITED;
/* create dataspace */
if((sid = H5Screate_simple(2, dim2d, max_dim2d)) < 0) TEST_ERROR
/* create and set chunk plist */
if((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR
if(H5Pset_chunk(pid, 2, chunk_dim2d) < 0) TEST_ERROR
/* create dataset */
if((did = H5Dcreate(fid_src, NAME_DATASET_CHUNKED, H5T_NATIVE_FLOAT, sid, pid)) < 0) TEST_ERROR
/* close chunk plist */
if(H5Pclose(pid) < 0) TEST_ERROR
/* write data into file */
if(H5Dwrite(did, H5T_NATIVE_FLOAT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* Set extended dataset dimensions */
new_dim2d[0] = DIM_SIZE_1 * 2;
new_dim2d[1] = DIM_SIZE_2 * 2;
/* Extend dataset's dimensions */
if(H5Dextend(did, new_dim2d) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
/* attach attributes to the dataset */
if(test_copy_attach_attributes(did, H5T_NATIVE_INT) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate(fid_dst, NAME_GROUP_UNCOPIED, (size_t)0)) < 0) TEST_ERROR
/* copy the dataset from SRC to DST */
if(H5Ocopy(fid_src, NAME_DATASET_CHUNKED, fid_dst, NAME_DATASET_CHUNKED, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the dataset for copy */
if((did = H5Dopen(fid_src, NAME_DATASET_CHUNKED)) < 0) TEST_ERROR
/* open the destination dataset */
if((did2 = H5Dopen(fid_dst, NAME_DATASET_CHUNKED)) < 0) TEST_ERROR
/* Check if the datasets are equal */
if(compare_datasets(did, did2, H5P_DEFAULT, NULL) != TRUE) TEST_ERROR
/* close the destination dataset */
if(H5Dclose(did2) < 0) TEST_ERROR
/* close the source dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Dclose(did2);
H5Dclose(did);
H5Pclose(pid);
H5Sclose(sid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_dataset_chunked_sparse */
/*-------------------------------------------------------------------------
* Function: test_copy_dataset_compressed
*
* Purpose: Create a compressed, chunked dataset in SRC file and copy it to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Quincey Koziol
* Monday, October 31, 2005
*
*-------------------------------------------------------------------------
*/
static int
test_copy_dataset_compressed(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
#ifdef H5_HAVE_FILTER_DEFLATE
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t sid = -1; /* Dataspace ID */
hid_t pid = -1; /* Dataset creation property list ID */
hid_t did = -1, did2 = -1; /* Dataset IDs */
hsize_t dim2d[2]; /* Dataset dimensions */
hsize_t chunk_dim2d[2] ={CHUNK_SIZE_1, CHUNK_SIZE_2}; /* Chunk dimensions */
float buf[DIM_SIZE_1][DIM_SIZE_2]; /* Buffer for writing data */
int i, j; /* Local index variables */
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
#endif /* H5_HAVE_FILTER_DEFLATE */
TESTING("H5Ocopy(): compressed dataset");
#ifndef H5_HAVE_FILTER_DEFLATE
SKIPPED();
puts(" Deflation filter not available");
#else /* H5_HAVE_FILTER_DEFLATE */
/* set initial data values */
for (i=0; i<DIM_SIZE_1; i++)
for (j=0; j<DIM_SIZE_2; j++)
buf[i][j] = (float)(100.0); /* Something easy to compress */
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim2d[0]=DIM_SIZE_1;
dim2d[1]=DIM_SIZE_2;
/* create dataspace */
if((sid = H5Screate_simple(2, dim2d, NULL)) < 0) TEST_ERROR
/* create and set comp & chunk plist */
if((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR
if(H5Pset_chunk(pid, 2, chunk_dim2d) < 0) TEST_ERROR
if(H5Pset_deflate(pid, 9) < 0) TEST_ERROR
/* create dataset */
if((did = H5Dcreate(fid_src, NAME_DATASET_CHUNKED, H5T_NATIVE_FLOAT, sid, pid)) < 0) TEST_ERROR
/* close chunk plist */
if(H5Pclose(pid) < 0) TEST_ERROR
/* write data into file */
if(H5Dwrite(did, H5T_NATIVE_FLOAT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
/* attach attributes to the dataset */
if(test_copy_attach_attributes(did, H5T_NATIVE_INT) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate(fid_dst, NAME_GROUP_UNCOPIED, (size_t)0)) < 0) TEST_ERROR
/* copy the dataset from SRC to DST */
if(H5Ocopy(fid_src, NAME_DATASET_CHUNKED, fid_dst, NAME_DATASET_CHUNKED, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the dataset for copy */
if((did = H5Dopen(fid_src, NAME_DATASET_CHUNKED)) < 0) TEST_ERROR
/* open the destination dataset */
if((did2 = H5Dopen(fid_dst, NAME_DATASET_CHUNKED)) < 0) TEST_ERROR
/* Check if the datasets are equal */
if(compare_datasets(did, did2, H5P_DEFAULT, NULL) != TRUE) TEST_ERROR
/* close the destination dataset */
if(H5Dclose(did2) < 0) TEST_ERROR
/* close the source dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
PASSED();
#endif /* H5_HAVE_FILTER_DEFLATE */
return 0;
#ifdef H5_HAVE_FILTER_DEFLATE
error:
H5E_BEGIN_TRY {
H5Dclose(did2);
H5Dclose(did);
H5Pclose(pid);
H5Sclose(sid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
#endif /* H5_HAVE_FILTER_DEFLATE */
} /* end test_copy_dataset_compressed */
/*-------------------------------------------------------------------------
* Function: test_copy_dataset_compact
*
* Purpose: Create a compact dataset in SRC file and copy it to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Quincey Koziol
* Monday, October 31, 2005
*
*-------------------------------------------------------------------------
*/
static int
test_copy_dataset_compact(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t sid = -1; /* Dataspace ID */
hid_t pid = -1; /* Dataset creation property list ID */
hid_t did = -1, did2 = -1; /* Dataset IDs */
hsize_t dim2d[2]; /* Dataset dimensions */
float buf[DIM_SIZE_1][DIM_SIZE_2]; /* Buffer for writing data */
int i, j; /* Local index variables */
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): compact dataset");
/* set initial data values */
for (i=0; i<DIM_SIZE_1; i++)
for (j=0; j<DIM_SIZE_2; j++)
buf[i][j] = (float)(i+j/100.0);
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim2d[0]=DIM_SIZE_1;
dim2d[1]=DIM_SIZE_2;
/* create dataspace */
if((sid = H5Screate_simple(2, dim2d, NULL)) < 0) TEST_ERROR
/* create and set compact plist */
if((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR
if(H5Pset_layout(pid, H5D_COMPACT) < 0) TEST_ERROR
/* create dataset */
if((did = H5Dcreate(fid_src, NAME_DATASET_COMPACT, H5T_NATIVE_FLOAT, sid, pid)) < 0) TEST_ERROR
/* close chunk plist */
if(H5Pclose(pid) < 0) TEST_ERROR
/* write data into file */
if(H5Dwrite(did, H5T_NATIVE_FLOAT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
/* attach attributes to the dataset */
if(test_copy_attach_attributes(did, H5T_NATIVE_INT) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate(fid_dst, NAME_GROUP_UNCOPIED, (size_t)0)) < 0) TEST_ERROR
/* copy the dataset from SRC to DST */
if(H5Ocopy(fid_src, NAME_DATASET_COMPACT, fid_dst, NAME_DATASET_COMPACT, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the dataset for copy */
if((did = H5Dopen(fid_src, NAME_DATASET_COMPACT)) < 0) TEST_ERROR
/* open the destination dataset */
if((did2 = H5Dopen(fid_dst, NAME_DATASET_COMPACT)) < 0) TEST_ERROR
/* Check if the datasets are equal */
if(compare_datasets(did, did2, H5P_DEFAULT, buf) != TRUE) TEST_ERROR
/* close the destination dataset */
if(H5Dclose(did2) < 0) TEST_ERROR
/* close the source dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Dclose(did2);
H5Dclose(did);
H5Pclose(pid);
H5Sclose(sid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_dataset_compact */
/*-------------------------------------------------------------------------
* Function: test_copy_dataset_external
*
* Purpose: Create an external dataset in SRC file and copy it to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Peter Cao
* Friday, September 30, 2005
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
static int
test_copy_dataset_external(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t sid = -1; /* Dataspace ID */
hid_t pid = -1; /* Dataset creation property list ID */
hid_t did = -1, did2 = -1; /* Dataset IDs */
int i;
hsize_t size;
hsize_t dim1d[1];
int buf[DIM_SIZE_1];
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): external dataset");
/* set initial data values */
for (i=0; i<DIM_SIZE_1; i++)
buf[i] = i;
/* create an empty external file */
HDfclose(HDfopen (FILE_EXT, "w"));
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim1d[0]=DIM_SIZE_1;
/* create dataspace */
if((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR
/* set dataset creation plist */
size = DIM_SIZE_1 * sizeof (int);
if((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR
if(H5Pset_external(pid, FILE_EXT, (off_t)0, size) < 0) TEST_ERROR
/* create dataset at SRC file */
if((did = H5Dcreate(fid_src, NAME_DATASET_EXTERNAL, H5T_NATIVE_INT, sid, pid)) < 0) TEST_ERROR
/* write data into file */
if(H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
/* close external plist */
if(H5Pclose(pid) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate(fid_dst, NAME_GROUP_UNCOPIED, (size_t)0)) < 0) TEST_ERROR
/* copy the dataset from SRC to DST */
if(H5Ocopy(fid_src, NAME_DATASET_EXTERNAL, fid_dst, NAME_DATASET_EXTERNAL, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the dataset for copy */
if((did = H5Dopen(fid_src, NAME_DATASET_EXTERNAL)) < 0) TEST_ERROR
/* open the destination dataset */
if((did2 = H5Dopen(fid_dst, NAME_DATASET_EXTERNAL)) < 0) TEST_ERROR
/* Check if the datasets are equal */
if(compare_datasets(did, did2, H5P_DEFAULT, buf) != TRUE) TEST_ERROR
/* close the destination dataset */
if(H5Dclose(did2) < 0) TEST_ERROR
/* close the source dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Dclose(did2);
H5Dclose(did);
H5Pclose(pid);
H5Sclose(sid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_dataset_external */
/*-------------------------------------------------------------------------
* Function: test_copy_dataset_named_dtype
*
* Purpose: Create a dataset that uses a named datatype in SRC file and
* copy it to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Quincey Koziol
* Monday, October 31, 2005
*
*-------------------------------------------------------------------------
*/
static int
test_copy_dataset_named_dtype(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t tid = -1; /* Datatype ID */
hid_t sid = -1; /* Dataspace ID */
hid_t did = -1, did2 = -1; /* Dataset IDs */
int i;
hsize_t dim1d[1];
int buf[DIM_SIZE_1];
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): dataset that uses named datatype");
/* set initial data values */
for (i=0; i<DIM_SIZE_1; i++)
buf[i] = i;
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim1d[0]=DIM_SIZE_1;
/* create dataspace */
if((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR
/* create named datatype */
if((tid = H5Tcopy(H5T_NATIVE_INT)) < 0) TEST_ERROR
if((H5Tcommit(fid_src, NAME_DATATYPE_SIMPLE, tid)) < 0) TEST_ERROR
/* create dataset at SRC file */
if((did = H5Dcreate(fid_src, NAME_DATASET_NAMED_DTYPE, tid, sid, H5P_DEFAULT)) < 0) TEST_ERROR
/* close the datatype */
if(H5Tclose(tid) < 0) TEST_ERROR
/* write data into file */
if(H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate(fid_dst, NAME_GROUP_UNCOPIED, (size_t)0)) < 0) TEST_ERROR
/* copy the dataset from SRC to DST */
if(H5Ocopy(fid_src, NAME_DATASET_NAMED_DTYPE, fid_dst, NAME_DATASET_NAMED_DTYPE, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the dataset for copy */
if((did = H5Dopen(fid_src, NAME_DATASET_NAMED_DTYPE)) < 0) TEST_ERROR
/* open the destination dataset */
if((did2 = H5Dopen(fid_dst, NAME_DATASET_NAMED_DTYPE)) < 0) TEST_ERROR
/* Check if the datasets are equal */
if(compare_datasets(did, did2, H5P_DEFAULT, buf) != TRUE) TEST_ERROR
/* close the destination dataset */
if(H5Dclose(did2) < 0) TEST_ERROR
/* close the source dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Dclose(did2);
H5Dclose(did);
H5Tclose(tid);
H5Sclose(sid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_dataset_named_dtype */
/*-------------------------------------------------------------------------
* Function: test_copy_dataset_named_dtype_hier
*
* Purpose: Create a hierarchy of datasets that use a named datatype in
* SRC file and copy hierarchy to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Quincey Koziol
* Tuesday, October 31, 2005
*
*-------------------------------------------------------------------------
*/
static int
test_copy_dataset_named_dtype_hier(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t tid = -1; /* Datatype ID */
hid_t sid = -1; /* Dataspace ID */
hid_t did = -1; /* Dataset ID */
hid_t gid = -1, gid2 = -1; /* Group IDs */
int i;
hsize_t dim1d[1];
int buf[DIM_SIZE_1];
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): hier. of datasets using named datatype inside hier.");
/* set initial data values */
for (i=0; i<DIM_SIZE_1; i++)
buf[i] = i;
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* Create group to place all objects in */
if((gid = H5Gcreate(fid_src, NAME_GROUP_TOP, (size_t)0)) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim1d[0]=DIM_SIZE_1;
/* create dataspace */
if((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR
/* create named datatype _inside_ hierarchy to copy */
if((tid = H5Tcopy(H5T_NATIVE_INT)) < 0) TEST_ERROR
if((H5Tcommit(gid, NAME_DATATYPE_SIMPLE, tid)) < 0) TEST_ERROR
/* create first dataset at SRC file */
if((did = H5Dcreate(gid, NAME_DATASET_NAMED_DTYPE, tid, sid, H5P_DEFAULT)) < 0) TEST_ERROR
/* write data into file */
if(H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* create second dataset at SRC file */
if((did = H5Dcreate(gid, NAME_DATASET_NAMED_DTYPE2, tid, sid, H5P_DEFAULT)) < 0) TEST_ERROR
/* write data into file */
if(H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the datatype */
if(H5Tclose(tid) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
/* close group */
if(H5Gclose(gid) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate(fid_dst, NAME_GROUP_UNCOPIED, (size_t)0)) < 0) TEST_ERROR
/* copy the dataset from SRC to DST */
if(H5Ocopy(fid_src, NAME_GROUP_TOP, fid_dst, NAME_GROUP_TOP, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the group for copy */
if((gid = H5Gopen(fid_src, NAME_GROUP_TOP)) < 0) TEST_ERROR
/* open the destination group */
if((gid2 = H5Gopen(fid_dst, NAME_GROUP_TOP)) < 0) TEST_ERROR
/* Check if the groups are equal */
if(compare_groups(gid, gid2, H5P_DEFAULT, -1, 0) != TRUE) TEST_ERROR
/* close the destination group */
if(H5Gclose(gid2) < 0) TEST_ERROR
/* close the source group */
if(H5Gclose(gid) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Dclose(did);
H5Tclose(tid);
H5Sclose(sid);
H5Gclose(gid2);
H5Gclose(gid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_dataset_named_dtype_hier */
/*-------------------------------------------------------------------------
* Function: test_copy_dataset_named_dtype_hier_outside
*
* Purpose: Create a hierarchy of datasets that use a named datatype that
* is outside of hierarchy in SRC file and copy hierarchy to DST
* file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Quincey Koziol
* Tuesday, October 31, 2005
*
*-------------------------------------------------------------------------
*/
static int
test_copy_dataset_named_dtype_hier_outside(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t tid = -1; /* Datatype ID */
hid_t sid = -1; /* Dataspace ID */
hid_t did = -1; /* Dataset ID */
hid_t gid = -1, gid2 = -1; /* Group IDs */
int i;
hsize_t dim1d[1];
int buf[DIM_SIZE_1];
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): hier. of datasets using named datatype outside hier.");
/* set initial data values */
for (i=0; i<DIM_SIZE_1; i++)
buf[i] = i;
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* Create group to place all objects in */
if((gid = H5Gcreate(fid_src, NAME_GROUP_TOP, (size_t)0)) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim1d[0]=DIM_SIZE_1;
/* create dataspace */
if((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR
/* create named datatype _outside_ hierarchy to copy */
if((tid = H5Tcopy(H5T_NATIVE_INT)) < 0) TEST_ERROR
if((H5Tcommit(fid_src, NAME_DATATYPE_SIMPLE, tid)) < 0) TEST_ERROR
/* create first dataset at SRC file */
if((did = H5Dcreate(gid, NAME_DATASET_NAMED_DTYPE, tid, sid, H5P_DEFAULT)) < 0) TEST_ERROR
/* write data into file */
if(H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* create second dataset at SRC file */
if((did = H5Dcreate(gid, NAME_DATASET_NAMED_DTYPE2, tid, sid, H5P_DEFAULT)) < 0) TEST_ERROR
/* write data into file */
if(H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the datatype */
if(H5Tclose(tid) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
/* close group */
if(H5Gclose(gid) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate(fid_dst, NAME_GROUP_UNCOPIED, (size_t)0)) < 0) TEST_ERROR
/* copy the dataset from SRC to DST */
if(H5Ocopy(fid_src, NAME_GROUP_TOP, fid_dst, NAME_GROUP_TOP, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the group for copy */
if((gid = H5Gopen(fid_src, NAME_GROUP_TOP)) < 0) TEST_ERROR
/* open the destination group */
if((gid2 = H5Gopen(fid_dst, NAME_GROUP_TOP)) < 0) TEST_ERROR
/* Check if the groups are equal */
if(compare_groups(gid, gid2, H5P_DEFAULT, -1, 0) != TRUE) TEST_ERROR
/* close the destination group */
if(H5Gclose(gid2) < 0) TEST_ERROR
/* close the source group */
if(H5Gclose(gid) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Dclose(did);
H5Tclose(tid);
H5Sclose(sid);
H5Gclose(gid2);
H5Gclose(gid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_dataset_named_dtype_hier_outside */
/*-------------------------------------------------------------------------
* Function: test_copy_dataset_multi_ohdr_chunks
*
* Purpose: Create a pair of datasets that add attributes in a way that
* creates lots of object header chunks in SRC file and copy
* datasets to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Quincey Koziol
* Tuesday, October 31, 2005
*
*-------------------------------------------------------------------------
*/
static int
test_copy_dataset_multi_ohdr_chunks(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t sid = -1; /* Dataspace ID */
hid_t did = -1, did2 = -1; /* Dataset IDs */
hid_t gid = -1, gid2 = -1; /* Group IDs */
int i;
hsize_t dim1d[1];
int buf[DIM_SIZE_1];
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): datasets that have multiple ohdr chunks");
/* set initial data values */
for (i=0; i<DIM_SIZE_1; i++)
buf[i] = i;
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* Create group to place all objects in */
if((gid = H5Gcreate(fid_src, NAME_GROUP_TOP, (size_t)0)) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim1d[0]=DIM_SIZE_1;
/* create dataspace */
if((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR
/* create first dataset at SRC file */
if((did = H5Dcreate(gid, NAME_DATASET_MULTI_OHDR, H5T_NATIVE_INT, sid, H5P_DEFAULT)) < 0) TEST_ERROR
/* write data into file */
if(H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* create second dataset at SRC file */
if((did2 = H5Dcreate(gid, NAME_DATASET_MULTI_OHDR2, H5T_NATIVE_INT, sid, H5P_DEFAULT)) < 0) TEST_ERROR
/* write data into file */
if(H5Dwrite(did2, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* Add attributes to datasets in a way that creates lots of chunks */
if(test_copy_attach_paired_attributes(did, did2, H5T_NATIVE_INT) < 0) TEST_ERROR
/* close the first dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the second dataset */
if(H5Dclose(did2) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
/* close group */
if(H5Gclose(gid) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate(fid_dst, NAME_GROUP_UNCOPIED, (size_t)0)) < 0) TEST_ERROR
/* copy the dataset from SRC to DST */
if(H5Ocopy(fid_src, NAME_GROUP_TOP, fid_dst, NAME_GROUP_TOP, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the group for copy */
if((gid = H5Gopen(fid_src, NAME_GROUP_TOP)) < 0) TEST_ERROR
/* open the destination group */
if((gid2 = H5Gopen(fid_dst, NAME_GROUP_TOP)) < 0) TEST_ERROR
/* Check if the groups are equal */
if(compare_groups(gid, gid2, H5P_DEFAULT, -1, 0) != TRUE) TEST_ERROR
/* close the destination group */
if(H5Gclose(gid2) < 0) TEST_ERROR
/* close the source group */
if(H5Gclose(gid) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Dclose(did2);
H5Dclose(did);
H5Sclose(sid);
H5Gclose(gid2);
H5Gclose(gid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_dataset_multi_ohdr_chunks */
/*-------------------------------------------------------------------------
* Function: test_copy_dataset_attr_named_dtype
*
* Purpose: Create a pair of datasets that add attributes that use
* named datatypes in SRC file and copy datasets to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Quincey Koziol
* Tuesday, October 31, 2005
*
*-------------------------------------------------------------------------
*/
static int
test_copy_dataset_attr_named_dtype(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t tid = -1; /* Datatype ID */
hid_t sid = -1; /* Dataspace ID */
hid_t did = -1, did2 = -1; /* Dataset IDs */
hid_t gid = -1, gid2 = -1; /* Group IDs */
int i;
hsize_t dim1d[1];
int buf[DIM_SIZE_1];
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): objects with attributes using named datatypes");
/* set initial data values */
for (i=0; i<DIM_SIZE_1; i++)
buf[i] = i;
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* Create group to place all objects in */
if((gid = H5Gcreate(fid_src, NAME_GROUP_TOP, (size_t)0)) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim1d[0]=DIM_SIZE_1;
/* create dataspace */
if((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR
/* create named datatype _outside_ hierarchy to copy */
if((tid = H5Tcopy(H5T_NATIVE_INT)) < 0) TEST_ERROR
if((H5Tcommit(fid_src, NAME_DATATYPE_SIMPLE, tid)) < 0) TEST_ERROR
/* create first dataset at SRC file */
if((did = H5Dcreate(gid, NAME_DATASET_MULTI_OHDR, tid, sid, H5P_DEFAULT)) < 0) TEST_ERROR
/* write data into file */
if(H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* create second dataset at SRC file */
if((did2 = H5Dcreate(gid, NAME_DATASET_MULTI_OHDR2, tid, sid, H5P_DEFAULT)) < 0) TEST_ERROR
/* write data into file */
if(H5Dwrite(did2, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* Add attributes to datasets in a way that creates lots of chunks */
if(test_copy_attach_paired_attributes(did, did2, tid) < 0) TEST_ERROR
/* close the datatype */
if(H5Tclose(tid) < 0) TEST_ERROR
/* close the first dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the second dataset */
if(H5Dclose(did2) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
/* close group */
if(H5Gclose(gid) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate(fid_dst, NAME_GROUP_UNCOPIED, (size_t)0)) < 0) TEST_ERROR
/* copy the dataset from SRC to DST */
if(H5Ocopy(fid_src, NAME_GROUP_TOP, fid_dst, NAME_GROUP_TOP, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the group for copy */
if((gid = H5Gopen(fid_src, NAME_GROUP_TOP)) < 0) TEST_ERROR
/* open the destination group */
if((gid2 = H5Gopen(fid_dst, NAME_GROUP_TOP)) < 0) TEST_ERROR
/* Check if the groups are equal */
if(compare_groups(gid, gid2, H5P_DEFAULT, -1, 0) != TRUE) TEST_ERROR
/* close the destination group */
if(H5Gclose(gid2) < 0) TEST_ERROR
/* close the source group */
if(H5Gclose(gid) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Dclose(did2);
H5Dclose(did);
H5Tclose(tid);
H5Sclose(sid);
H5Gclose(gid2);
H5Gclose(gid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_dataset_attr_named_dtype */
/*-------------------------------------------------------------------------
* Function: test_copy_dataset_contig_vl
*
* Purpose: Create a contiguous dataset w/VLEN datatype in SRC
* file and copy it to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Peter Cao
* Friday, September 30, 2005
*
*-------------------------------------------------------------------------
*/
static int
test_copy_dataset_contig_vl(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t tid = -1; /* Datatype ID */
hid_t sid = -1; /* Dataspace ID */
hid_t did = -1, did2 = -1; /* Dataset IDs */
unsigned int i, j; /* Local index variables */
hsize_t dim1d[1]; /* Dataset dimensions */
hvl_t buf[DIM_SIZE_1]; /* Buffer for writing data */
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): contiguous dataset with VLEN datatype");
/* set initial data values */
for(i = 0; i < DIM_SIZE_1; i++) {
buf[i].len = i+1;
buf[i].p = (int *)HDmalloc(buf[i].len * sizeof(int));
for(j = 0; j < buf[i].len; j++)
((int *)buf[i].p)[j] = i*10+j;
} /* end for */
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim1d[0]=DIM_SIZE_1;
/* create dataspace */
if((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR
/* create datatype */
if((tid = H5Tvlen_create(H5T_NATIVE_INT)) < 0) TEST_ERROR
/* create dataset at SRC file */
if((did = H5Dcreate(fid_src, NAME_DATASET_VL, tid, sid, H5P_DEFAULT)) < 0) TEST_ERROR
/* write data into file */
if(H5Dwrite(did, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate(fid_dst, NAME_GROUP_UNCOPIED, (size_t)0)) < 0) TEST_ERROR
/* copy the dataset from SRC to DST */
if(H5Ocopy(fid_src, NAME_DATASET_VL, fid_dst, NAME_DATASET_VL, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the dataset for copy */
if((did = H5Dopen(fid_src, NAME_DATASET_VL)) < 0) TEST_ERROR
/* open the destination dataset */
if((did2 = H5Dopen(fid_dst, NAME_DATASET_VL)) < 0) TEST_ERROR
/* Check if the datasets are equal */
if(compare_datasets(did, did2, H5P_DEFAULT, buf) != TRUE) TEST_ERROR
/* close the destination dataset */
if(H5Dclose(did2) < 0) TEST_ERROR
/* close the source dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
/* Reclaim vlen buffer */
if(H5Dvlen_reclaim(tid, sid, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close datatype */
if(H5Tclose(tid) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Dclose(did2);
H5Dclose(did);
H5Dvlen_reclaim(tid, sid, H5P_DEFAULT, buf);
H5Tclose(tid);
H5Sclose(sid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_dataset_contig_vl */
/*-------------------------------------------------------------------------
* Function: test_copy_dataset_chunked_vl
*
* Purpose: Create a chunked dataset w/VLEN datatype in SRC
* file and copy it to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Peter Cao
* Saturday, December 10, 2005
*
*-------------------------------------------------------------------------
*/
static int
test_copy_dataset_chunked_vl(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t tid = -1; /* Datatype ID */
hid_t sid = -1; /* Dataspace ID */
hid_t pid = -1; /* Dataset creation property list ID */
hid_t did = -1, did2 = -1; /* Dataset IDs */
unsigned int i, j; /* Local index variables */
hsize_t dim1d[1]; /* Dataset dimensions */
hsize_t chunk_dim1d[1] = {CHUNK_SIZE_1}; /* Chunk dimensions */
hvl_t buf[DIM_SIZE_1]; /* Buffer for writing data */
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): chunked dataset with VLEN datatype");
/* set initial data values */
for(i = 0; i < DIM_SIZE_1; i++) {
buf[i].len = i+1;
buf[i].p = (int *)HDmalloc(buf[i].len * sizeof(int));
for(j = 0; j < buf[i].len; j++)
((int *)buf[i].p)[j] = i*10+j;
} /* end for */
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim1d[0]=DIM_SIZE_1;
/* create dataspace */
if((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR
/* create datatype */
if((tid = H5Tvlen_create(H5T_NATIVE_INT)) < 0) TEST_ERROR
/* create and set chunk plist */
if((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR
if(H5Pset_chunk(pid, 1, chunk_dim1d) < 0) TEST_ERROR
/* create dataset at SRC file */
if((did = H5Dcreate(fid_src, NAME_DATASET_VL, tid, sid, pid)) < 0) TEST_ERROR
/* close chunk plist */
if(H5Pclose(pid) < 0) TEST_ERROR
/* write data into file */
if(H5Dwrite(did, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate(fid_dst, NAME_GROUP_UNCOPIED, (size_t)0)) < 0) TEST_ERROR
/* copy the dataset from SRC to DST */
if(H5Ocopy(fid_src, NAME_DATASET_VL, fid_dst, NAME_DATASET_VL, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the dataset for copy */
if((did = H5Dopen(fid_src, NAME_DATASET_VL)) < 0) TEST_ERROR
/* open the destination dataset */
if((did2 = H5Dopen(fid_dst, NAME_DATASET_VL)) < 0) TEST_ERROR
/* Check if the datasets are equal */
if(compare_datasets(did, did2, H5P_DEFAULT, buf) != TRUE) TEST_ERROR
/* close the destination dataset */
if(H5Dclose(did2) < 0) TEST_ERROR
/* close the source dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
/* Reclaim vlen buffer */
if(H5Dvlen_reclaim(tid, sid, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close datatype */
if(H5Tclose(tid) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Dclose(did2);
H5Dclose(did);
H5Dvlen_reclaim(tid, sid, H5P_DEFAULT, buf);
H5Tclose(tid);
H5Sclose(sid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_dataset_chunked_vl */
/*-------------------------------------------------------------------------
* Function: test_copy_dataset_compact_vl
*
* Purpose: Create a compact dataset w/VLEN datatype in SRC
* file and copy it to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Peter Cao
* Sunday, December 11, 2005
*
*-------------------------------------------------------------------------
*/
static int
test_copy_dataset_compact_vl(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t tid = -1; /* Datatype ID */
hid_t sid = -1; /* Dataspace ID */
hid_t pid = -1; /* Dataset creation property list ID */
hid_t did = -1, did2 = -1; /* Dataset IDs */
unsigned int i, j; /* Local index variables */
hsize_t dim1d[1]; /* Dataset dimensions */
hvl_t buf[DIM_SIZE_1]; /* Buffer for writing data */
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): compact dataset with VLEN datatype");
/* set initial data values */
for(i = 0; i < DIM_SIZE_1; i++) {
buf[i].len = i+1;
buf[i].p = (int *)HDmalloc(buf[i].len * sizeof(int));
for(j = 0; j < buf[i].len; j++)
((int *)buf[i].p)[j] = i*10+j;
} /* end for */
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim1d[0]=DIM_SIZE_1;
/* create dataspace */
if((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR
/* create datatype */
if((tid = H5Tvlen_create(H5T_NATIVE_INT)) < 0) TEST_ERROR
/* create and set compact plist */
if((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR
if(H5Pset_layout(pid, H5D_COMPACT) < 0) TEST_ERROR
/* create dataset at SRC file */
if((did = H5Dcreate(fid_src, NAME_DATASET_VL, tid, sid, pid)) < 0) TEST_ERROR
/* write data into file */
if(H5Dwrite(did, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close compact plist */
if(H5Pclose(pid) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate(fid_dst, NAME_GROUP_UNCOPIED, (size_t)0)) < 0) TEST_ERROR
/* copy the dataset from SRC to DST */
if(H5Ocopy(fid_src, NAME_DATASET_VL, fid_dst, NAME_DATASET_VL, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the dataset for copy */
if((did = H5Dopen(fid_src, NAME_DATASET_VL)) < 0) TEST_ERROR
/* open the destination dataset */
if((did2 = H5Dopen(fid_dst, NAME_DATASET_VL)) < 0) TEST_ERROR
/* Check if the datasets are equal */
if(compare_datasets(did, did2, H5P_DEFAULT, buf) != TRUE) TEST_ERROR
/* close the destination dataset */
if(H5Dclose(did2) < 0) TEST_ERROR
/* close the source dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
/* Reclaim vlen buffer */
if(H5Dvlen_reclaim(tid, sid, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close datatype */
if(H5Tclose(tid) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Dclose(did2);
H5Dclose(did);
H5Dvlen_reclaim(tid, sid, H5P_DEFAULT, buf);
H5Tclose(tid);
H5Sclose(sid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_dataset_compact_vl */
/*-------------------------------------------------------------------------
* Function: test_copy_attribute_vl
*
* Purpose: Create a simple dataset with vlen attributes in SRC file
* and copy it to DST file (Note: dataset has no data)
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Peter Cao
* Saturday, December , 2005
*
*-------------------------------------------------------------------------
*/
static int
test_copy_attribute_vl(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t sid = -1; /* Dataspace ID */
hid_t did = -1, did2 = -1; /* Dataset IDs */
hid_t aid = -1, aid2 = -1; /* Attribute IDs */
hsize_t dim2d[2]; /* Dataset dimensions */
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): variable length attribute");
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim2d[0] = DIM_SIZE_1;
dim2d[1] = DIM_SIZE_2;
/* create 2D dataspace */
if((sid = H5Screate_simple(2, dim2d, NULL)) < 0) TEST_ERROR
/* create 2D int dataset at SRC file */
if((did = H5Dcreate(fid_src, NAME_DATASET_SIMPLE, H5T_NATIVE_INT, sid, H5P_DEFAULT)) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
/* attach VL attribute to the dataset */
if(test_copy_attach_attribute_vl(did) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate(fid_dst, NAME_GROUP_UNCOPIED, (size_t)0)) < 0) TEST_ERROR
/* copy the dataset from SRC to DST */
if(H5Ocopy(fid_src, NAME_DATASET_SIMPLE, fid_dst, NAME_DATASET_SIMPLE, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the dataset for copy */
if((did = H5Dopen(fid_src, NAME_DATASET_SIMPLE)) < 0) TEST_ERROR
/* open the destination dataset */
if((did2 = H5Dopen(fid_dst, NAME_DATASET_SIMPLE)) < 0) TEST_ERROR
/* Check if the attributes are equal */
if((aid = H5Aopen_idx(did, 0)) < 0) TEST_ERROR
if((aid2 = H5Aopen_idx(did2, 0)) < 0) TEST_ERROR
if(compare_attribute(aid, aid2, H5P_DEFAULT, NULL) != TRUE) TEST_ERROR
if(H5Aclose(aid) < 0) TEST_ERROR
if(H5Aclose(aid2) < 0) TEST_ERROR
/* close the destination dataset */
if(H5Dclose(did2) < 0) TEST_ERROR
/* close the source dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Aclose(aid2);
H5Aclose(aid);
H5Dclose(did2);
H5Dclose(did);
H5Sclose(sid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_dataset_simple_empty */
/*-------------------------------------------------------------------------
* Function: test_copy_dataset_compressed_vl
*
* Purpose: Create a compressed, chunked, VLEN dataset in SRC
* file and copy it to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Peter Cao
* Tuesday, December 27, 2005
*
*-------------------------------------------------------------------------
*/
static int
test_copy_dataset_compressed_vl(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
#ifdef H5_HAVE_FILTER_DEFLATE
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t sid = -1; /* Dataspace ID */
hid_t tid = -1; /* Datatype ID */
hid_t pid = -1; /* Dataset creation property list ID */
hid_t did = -1, did2 = -1; /* Dataset IDs */
hsize_t dim2d[2]; /* Dataset dimensions */
hsize_t chunk_dim2d[2] ={CHUNK_SIZE_1, CHUNK_SIZE_2}; /* Chunk dimensions */
hvl_t buf[DIM_SIZE_1][DIM_SIZE_2]; /* Buffer for writing data */
int i, j, k; /* Local index variables */
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
#endif /* H5_HAVE_FILTER_DEFLATE */
TESTING("H5Ocopy(): compressed dataset with VLEN datatype");
#ifndef H5_HAVE_FILTER_DEFLATE
SKIPPED();
puts(" Deflation filter not available");
#else /* H5_HAVE_FILTER_DEFLATE */
/* set initial data values */
for (i = 0; i < DIM_SIZE_1; i++) {
for (j = 0; j < DIM_SIZE_2; j++) {
buf[i][j].len = j + 1;
buf[i][j].p = (int *)HDmalloc(buf[i][j].len * sizeof(int));
for (k = 0; k < (int)buf[i][j].len; k++)
((int *)buf[i][j].p)[k] = i * 10000 + j * 100 + k;
}
}
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim2d[0]=DIM_SIZE_1;
dim2d[1]=DIM_SIZE_2;
/* create dataspace */
if((sid = H5Screate_simple(2, dim2d, NULL)) < 0) TEST_ERROR
/* create datatype */
if((tid = H5Tvlen_create(H5T_NATIVE_INT)) < 0) TEST_ERROR
/* create and set comp & chunk plist */
if((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR
if(H5Pset_chunk(pid, 2, chunk_dim2d) < 0) TEST_ERROR
if(H5Pset_deflate(pid, 9) < 0) TEST_ERROR
/* create dataset */
if((did = H5Dcreate(fid_src, NAME_DATASET_CHUNKED, tid, sid, pid)) < 0) TEST_ERROR
/* close chunk plist */
if(H5Pclose(pid) < 0) TEST_ERROR
/* write data into file */
if(H5Dwrite(did, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate(fid_dst, NAME_GROUP_UNCOPIED, (size_t)0)) < 0) TEST_ERROR
/* copy the dataset from SRC to DST */
if(H5Ocopy(fid_src, NAME_DATASET_CHUNKED, fid_dst, NAME_DATASET_CHUNKED, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the dataset for copy */
if((did = H5Dopen(fid_src, NAME_DATASET_CHUNKED)) < 0) TEST_ERROR
/* open the destination dataset */
if((did2 = H5Dopen(fid_dst, NAME_DATASET_CHUNKED)) < 0) TEST_ERROR
/* Check if the datasets are equal */
if(compare_datasets(did, did2, H5P_DEFAULT, NULL) != TRUE) TEST_ERROR
/* close the destination dataset */
if(H5Dclose(did2) < 0) TEST_ERROR
/* close the source dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
/* Reclaim vlen buffer */
if(H5Dvlen_reclaim(tid, sid, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close datatype */
if(H5Tclose(tid) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
PASSED();
#endif /* H5_HAVE_FILTER_DEFLATE */
return 0;
#ifdef H5_HAVE_FILTER_DEFLATE
error:
H5E_BEGIN_TRY {
H5Dclose(did2);
H5Dclose(did);
H5Pclose(pid);
H5Dvlen_reclaim(tid, sid, H5P_DEFAULT, buf);
H5Tclose(tid);
H5Sclose(sid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
#endif /* H5_HAVE_FILTER_DEFLATE */
} /* end test_copy_dataset_compressed_vl */
/*-------------------------------------------------------------------------
* Function: test_copy_group_empty
*
* Purpose: Create an empty group in SRC file and copy it to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Peter Cao
* Friday, September 30, 2005
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
static int
test_copy_group_empty(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t gid = -1, gid2 = -1; /* Group IDs */
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): empty group");
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* create group at the SRC file */
if((gid = H5Gcreate(fid_src, NAME_GROUP_EMPTY, (size_t)0)) < 0) TEST_ERROR
/* attach attributes to the group */
if(test_copy_attach_attributes(gid, H5T_NATIVE_INT) < 0) TEST_ERROR
/* close the group */
if(H5Gclose(gid) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate(fid_dst, NAME_GROUP_UNCOPIED, (size_t)0)) < 0) TEST_ERROR
/* copy the group from SRC to DST */
if(H5Ocopy(fid_src, NAME_GROUP_EMPTY, fid_dst, NAME_GROUP_EMPTY, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the group for copy */
if((gid = H5Gopen(fid_src, NAME_GROUP_EMPTY)) < 0) TEST_ERROR
/* open the destination group */
if((gid2 = H5Gopen(fid_dst, NAME_GROUP_EMPTY)) < 0) TEST_ERROR
/* Check if the groups are equal */
if(compare_groups(gid, gid2, H5P_DEFAULT, -1, 0) != TRUE) TEST_ERROR
/* close the destination group */
if(H5Gclose(gid2) < 0) TEST_ERROR
/* close the source group */
if(H5Gclose(gid) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Gclose(gid2);
H5Gclose(gid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_group_empty */
/*-------------------------------------------------------------------------
* Function: test_copy_group
*
* Purpose: Create a group in SRC file and copy it to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Peter Cao
* Friday, September 30, 2005
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
static int
test_copy_group(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t sid = -1; /* Dataspace ID */
hid_t did = -1; /* Dataset ID */
hid_t gid = -1, gid2 = -1; /* Group IDs */
hid_t gid_sub = -1; /* Sub-group ID */
hsize_t dim2d[2];
int buf[DIM_SIZE_1][DIM_SIZE_2];
int i, j;
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): simple nested groups");
/* set initial data values */
for (i=0; i<DIM_SIZE_1; i++)
for (j=0; j<DIM_SIZE_2; j++)
buf[i][j] = 10000 + 100*i+j;
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* create group at the SRC file */
if((gid = H5Gcreate(fid_src, NAME_GROUP_TOP, (size_t)0)) < 0) TEST_ERROR
/* attach attributes to the group */
if(test_copy_attach_attributes(gid, H5T_NATIVE_INT) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim2d[0]=DIM_SIZE_1;
dim2d[1]=DIM_SIZE_2;
/* create dataspace */
if((sid = H5Screate_simple(2, dim2d, NULL)) < 0) TEST_ERROR
/* add a dataset to the group */
if((did = H5Dcreate(fid_src, NAME_GROUP_DATASET, H5T_NATIVE_INT, sid, H5P_DEFAULT) ) < 0) TEST_ERROR
if(H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* create a sub-group */
if((gid_sub = H5Gcreate(fid_src, NAME_GROUP_SUB, (size_t)0)) < 0) TEST_ERROR
if( H5Gclose(gid_sub) < 0) TEST_ERROR
/* create another sub-group */
if((gid_sub = H5Gcreate(fid_src, NAME_GROUP_SUB_2, (size_t)0)) < 0) TEST_ERROR
if( H5Gclose(gid_sub) < 0) TEST_ERROR
/* close the group */
if(H5Gclose(gid) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate(fid_dst, NAME_GROUP_UNCOPIED, (size_t)0)) < 0) TEST_ERROR
/* copy the group from SRC to DST */
if(H5Ocopy(fid_src, NAME_GROUP_TOP, fid_dst, NAME_GROUP_TOP, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the group for copy */
if((gid = H5Gopen(fid_src, NAME_GROUP_TOP)) < 0) TEST_ERROR
/* open the destination group */
if((gid2 = H5Gopen(fid_dst, NAME_GROUP_TOP)) < 0) TEST_ERROR
/* Check if the groups are equal */
if(compare_groups(gid, gid2, H5P_DEFAULT, -1, 0) != TRUE) TEST_ERROR
/* close the destination group */
if(H5Gclose(gid2) < 0) TEST_ERROR
/* close the source group */
if(H5Gclose(gid) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Sclose(sid);
H5Dclose(did);
H5Gclose(gid_sub);
H5Gclose(gid2);
H5Gclose(gid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_group */
/*-------------------------------------------------------------------------
* Function: test_copy_root_group
*
* Purpose: Create a root group in SRC file and copy it to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Peter Cao
* August 8, 2006
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
static int
test_copy_root_group(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t sid = -1; /* Dataspace ID */
hid_t did = -1; /* Dataset ID */
hid_t gid = -1, gid2 = -1; /* Group IDs */
hid_t gid_sub = -1; /* Sub-group ID */
hsize_t dim2d[2];
int buf[DIM_SIZE_1][DIM_SIZE_2];
int i, j;
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): root group");
/* set initial data values */
for (i=0; i<DIM_SIZE_1; i++)
for (j=0; j<DIM_SIZE_2; j++)
buf[i][j] = 10000 + 100*i+j;
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* create group at the SRC file */
if((gid = H5Gcreate(fid_src, NAME_GROUP_TOP, (size_t)0)) < 0) TEST_ERROR
/* attach attributes to the group */
if(test_copy_attach_attributes(gid, H5T_NATIVE_INT) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim2d[0] = DIM_SIZE_1;
dim2d[1] = DIM_SIZE_2;
/* create dataspace */
if((sid = H5Screate_simple(2, dim2d, NULL)) < 0) TEST_ERROR
/* add a dataset to the group */
if((did = H5Dcreate(fid_src, NAME_GROUP_DATASET, H5T_NATIVE_INT, sid, H5P_DEFAULT) ) < 0) TEST_ERROR
if(H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* create a sub-group */
if((gid_sub = H5Gcreate(fid_src, NAME_GROUP_SUB, (size_t)0)) < 0) TEST_ERROR
if(H5Gclose(gid_sub) < 0) TEST_ERROR
/* create another sub-group */
if((gid_sub = H5Gcreate(fid_src, NAME_GROUP_SUB_2, (size_t)0)) < 0) TEST_ERROR
if(H5Gclose(gid_sub) < 0) TEST_ERROR
/* close the group */
if(H5Gclose(gid) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate(fid_dst, NAME_GROUP_UNCOPIED, (size_t)0)) < 0) TEST_ERROR
/* copy the group from SRC to DST */
if(H5Ocopy(fid_src, "/", fid_dst, "/root_from_src", H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the group for copy */
if((gid = H5Gopen(fid_src, "/")) < 0) TEST_ERROR
/* open the destination group */
if((gid2 = H5Gopen(fid_dst, "/root_from_src")) < 0) TEST_ERROR
/* Check if the groups are equal */
if(compare_groups(gid, gid2, H5P_DEFAULT, -1, 0) != TRUE) TEST_ERROR
/* close the destination group */
if(H5Gclose(gid2) < 0) TEST_ERROR
/* close the source group */
if(H5Gclose(gid) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Sclose(sid);
H5Dclose(did);
H5Gclose(gid_sub);
H5Gclose(gid2);
H5Gclose(gid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_root_group */
/*-------------------------------------------------------------------------
* Function: test_copy_group_deep
*
* Purpose: Create a deep group hier. in SRC file and copy it to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Quincey Koziol
* Tuesday, November 1, 2005
*
*-------------------------------------------------------------------------
*/
static int
test_copy_group_deep(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t sid = -1; /* Dataspace ID */
hid_t did = -1; /* Dataset ID */
hid_t gid = -1, gid2 = -1; /* Group IDs */
hid_t gid_sub = -1, gid_sub2; /* Sub-group IDs */
hsize_t dim2d[2];
int buf[DIM_SIZE_1][DIM_SIZE_2];
int i, j, k; /* Local index variables */
char objname[NAME_BUF_SIZE]; /* Sub-group & dataset name buffer */
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): deep nested groups");
/* set initial data values */
for (i=0; i<DIM_SIZE_1; i++)
for (j=0; j<DIM_SIZE_2; j++)
buf[i][j] = 10000 + 100*i+j;
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* create group at the SRC file */
if((gid = H5Gcreate(fid_src, NAME_GROUP_TOP, (size_t)0)) < 0) TEST_ERROR
/* attach attributes to the group */
if(test_copy_attach_attributes(gid, H5T_NATIVE_INT) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim2d[0]=DIM_SIZE_1;
dim2d[1]=DIM_SIZE_2;
/* create dataspace */
if((sid = H5Screate_simple(2, dim2d, NULL)) < 0) TEST_ERROR
/* create nested sub-groups & datasets */
for(i = 0; i < NUM_SUB_GROUPS; i++) {
sprintf(objname, "Group #%d", i);
if((gid_sub = H5Gcreate(gid, objname, (size_t)0)) < 0) TEST_ERROR
for(j = 0; j < NUM_SUB_GROUPS; j++) {
sprintf(objname, "Group #%d", j);
if((gid_sub2 = H5Gcreate(gid_sub, objname, (size_t)0)) < 0) TEST_ERROR
for(k = 0; k < NUM_DATASETS; k++) {
sprintf(objname, "Dataset #%d", k);
/* add a dataset to the group */
if((did = H5Dcreate(gid_sub2, objname, H5T_NATIVE_INT, sid, H5P_DEFAULT) ) < 0) TEST_ERROR
if(H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
if(H5Dclose(did) < 0) TEST_ERROR
} /* end for */
if(H5Gclose(gid_sub2) < 0) TEST_ERROR
} /* end for */
if(H5Gclose(gid_sub) < 0) TEST_ERROR
} /* end for */
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
/* close the group */
if(H5Gclose(gid) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate(fid_dst, NAME_GROUP_UNCOPIED, (size_t)0)) < 0) TEST_ERROR
/* copy the group from SRC to DST */
if(H5Ocopy(fid_src, NAME_GROUP_TOP, fid_dst, NAME_GROUP_TOP, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the group for copy */
if((gid = H5Gopen(fid_src, NAME_GROUP_TOP)) < 0) TEST_ERROR
/* open the destination group */
if((gid2 = H5Gopen(fid_dst, NAME_GROUP_TOP)) < 0) TEST_ERROR
/* Check if the groups are equal */
if(compare_groups(gid, gid2, H5P_DEFAULT, -1, 0) != TRUE) TEST_ERROR
/* close the destination group */
if(H5Gclose(gid2) < 0) TEST_ERROR
/* close the source group */
if(H5Gclose(gid) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Sclose(sid);
H5Dclose(did);
H5Gclose(gid_sub);
H5Gclose(gid2);
H5Gclose(gid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_group_deep */
/*-------------------------------------------------------------------------
* Function: test_copy_group_loop
*
* Purpose: Create a group hier. with loops in SRC file and copy it to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Quincey Koziol
* Tuesday, November 1, 2005
*
*-------------------------------------------------------------------------
*/
static int
test_copy_group_loop(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t gid = -1, gid2 = -1; /* Group IDs */
hid_t gid_sub = -1, gid_sub2=-1; /* Sub-group IDs */
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): nested groups with loop");
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* create group at the SRC file */
if((gid = H5Gcreate(fid_src, NAME_GROUP_TOP, (size_t)0)) < 0) TEST_ERROR
/* attach attributes to the group */
if(test_copy_attach_attributes(gid, H5T_NATIVE_INT) < 0) TEST_ERROR
/* create sub-groups */
if((gid_sub = H5Gcreate(gid, NAME_GROUP_SUB, (size_t)0)) < 0) TEST_ERROR
if((gid_sub2 = H5Gcreate(gid, NAME_GROUP_SUB_SUB, (size_t)0)) < 0) TEST_ERROR
/* Create link to top group */
if(H5Glink2(gid, ".", H5L_TYPE_HARD, gid_sub2, NAME_GROUP_LOOP) < 0) TEST_ERROR
/* close sub sub group */
if( H5Gclose(gid_sub2) < 0) TEST_ERROR
/* close sub group */
if( H5Gclose(gid_sub) < 0) TEST_ERROR
/* close the group */
if(H5Gclose(gid) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate(fid_dst, NAME_GROUP_UNCOPIED, (size_t)0)) < 0) TEST_ERROR
/* copy the group from SRC to DST */
if(H5Ocopy(fid_src, NAME_GROUP_TOP, fid_dst, NAME_GROUP_TOP, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the group for copy */
if((gid = H5Gopen(fid_src, NAME_GROUP_TOP)) < 0) TEST_ERROR
/* open the destination group */
if((gid2 = H5Gopen(fid_dst, NAME_GROUP_TOP)) < 0) TEST_ERROR
/* Check if the groups are equal */
if(compare_groups(gid, gid2, H5P_DEFAULT, -1, 0) != TRUE) TEST_ERROR
/* close the destination group */
if(H5Gclose(gid2) < 0) TEST_ERROR
/* close the source group */
if(H5Gclose(gid) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Gclose(gid_sub2);
H5Gclose(gid_sub);
H5Gclose(gid2);
H5Gclose(gid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_group_loop */
/*-------------------------------------------------------------------------
* Function: test_copy_group_wide_loop
*
* Purpose: Create a group hier. with loops in SRC file and copy it to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Quincey Koziol
* Tuesday, November 1, 2005
*
* Note: Create groups w/lots of entries in each level, so that "dense"
* group form is used.
*
* Note: Also tests multiple links to a locked group during copy.
*
*-------------------------------------------------------------------------
*/
static int
test_copy_group_wide_loop(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t gid = -1, gid2 = -1; /* Group IDs */
hid_t gid_sub = -1, gid_sub2=-1; /* Sub-group IDs */
unsigned u, v; /* Local index variables */
char objname[NAME_BUF_SIZE]; /* Object name buffer */
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): wide nested groups with loop");
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* create group at the SRC file */
if((gid = H5Gcreate(fid_src, NAME_GROUP_TOP, (size_t)0)) < 0) TEST_ERROR
/* attach attributes to the group */
if(test_copy_attach_attributes(gid, H5T_NATIVE_INT) < 0) TEST_ERROR
/* create wide sub-group hierarchy, with multiple links to higher groups */
for(u = 0; u < NUM_WIDE_LOOP_GROUPS; u++) {
sprintf(objname, "%s-%u", NAME_GROUP_SUB, u);
if((gid_sub = H5Gcreate(gid, objname, (size_t)0)) < 0) TEST_ERROR
for(v = 0; v < NUM_WIDE_LOOP_GROUPS; v++) {
sprintf(objname, "%s-%u", NAME_GROUP_SUB_SUB2, v);
if((gid_sub2 = H5Gcreate(gid_sub, objname, (size_t)0)) < 0) TEST_ERROR
/* Create link to top group */
if(H5Glink2(gid, ".", H5L_TYPE_HARD, gid_sub2, NAME_GROUP_LOOP) < 0) TEST_ERROR
/* Create link to sub-group */
if(H5Glink2(gid_sub, ".", H5L_TYPE_HARD, gid_sub2, NAME_GROUP_LOOP2) < 0) TEST_ERROR
/* Create link to self :-) */
if(H5Glink2(gid_sub2, ".", H5L_TYPE_HARD, gid_sub2, NAME_GROUP_LOOP3) < 0) TEST_ERROR
/* close sub sub group */
if( H5Gclose(gid_sub2) < 0) TEST_ERROR
} /* end for */
/* close sub group */
if( H5Gclose(gid_sub) < 0) TEST_ERROR
} /* end for */
/* close the group */
if(H5Gclose(gid) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate(fid_dst, NAME_GROUP_UNCOPIED, (size_t)0)) < 0) TEST_ERROR
/* copy the group from SRC to DST */
if(H5Ocopy(fid_src, NAME_GROUP_TOP, fid_dst, NAME_GROUP_TOP, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the group for copy */
if((gid = H5Gopen(fid_src, NAME_GROUP_TOP)) < 0) TEST_ERROR
/* open the destination group */
if((gid2 = H5Gopen(fid_dst, NAME_GROUP_TOP)) < 0) TEST_ERROR
/* Check if the groups are equal */
if(compare_groups(gid, gid2, H5P_DEFAULT, -1, 0) != TRUE) TEST_ERROR
/* close the destination group */
if(H5Gclose(gid2) < 0) TEST_ERROR
/* close the source group */
if(H5Gclose(gid) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Gclose(gid_sub2);
H5Gclose(gid_sub);
H5Gclose(gid2);
H5Gclose(gid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_group_wide_loop */
/*-------------------------------------------------------------------------
* Function: test_copy_group_links
*
* Purpose: Create a group and links in SRC file and copy it to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Peter Cao
* Friday, September 30, 2005
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
static int
test_copy_group_links(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t sid = -1; /* Dataspace ID */
hid_t did = -1; /* Dataset ID */
hid_t gid = -1, gid2 = -1; /* Group IDs */
hsize_t dim2d[2];
int buf[DIM_SIZE_1][DIM_SIZE_2];
int i, j;
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): group with links");
/* set initial data values */
for (i=0; i<DIM_SIZE_1; i++)
for (j=0; j<DIM_SIZE_2; j++)
buf[i][j] = 10000 + 100*i+j;
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* create group at the SRC file */
if((gid = H5Gcreate(fid_src, NAME_GROUP_LINK, (size_t)0)) < 0) TEST_ERROR
/* attach attributes to the group */
if(test_copy_attach_attributes(gid, H5T_NATIVE_INT) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim2d[0]=DIM_SIZE_1;
dim2d[1]=DIM_SIZE_2;
/* create dataspace */
if((sid = H5Screate_simple(2, dim2d, NULL)) < 0) TEST_ERROR
/* add a dataset to the group */
if((did = H5Dcreate(fid_src, NAME_LINK_DATASET, H5T_NATIVE_INT, sid, H5P_DEFAULT) ) < 0) TEST_ERROR
if(H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* make a hard link to the dataset */
if(H5Glink(fid_src, H5L_TYPE_HARD, NAME_LINK_DATASET, NAME_LINK_HARD) < 0) TEST_ERROR
/* make a soft link to the dataset */
if(H5Glink(fid_src, H5L_TYPE_SOFT, NAME_LINK_DATASET, NAME_LINK_SOFT) < 0) TEST_ERROR
/* make a soft link to nowhere */
if(H5Glink(fid_src, H5L_TYPE_SOFT, "nowhere", NAME_LINK_SOFT_DANGLE) < 0) TEST_ERROR
/* make a dangling external link */
if(H5Lcreate_external("filename", "obj_name", fid_src, NAME_LINK_EXTERN, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* close the group */
if(H5Gclose(gid) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate(fid_dst, NAME_GROUP_UNCOPIED, (size_t)0)) < 0) TEST_ERROR
/* copy the group from SRC to DST */
if(H5Ocopy(fid_src, NAME_GROUP_LINK, fid_dst, NAME_GROUP_LINK, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the group for copy */
if((gid = H5Gopen(fid_src, NAME_GROUP_LINK)) < 0) TEST_ERROR
/* open the destination group */
if((gid2 = H5Gopen(fid_dst, NAME_GROUP_LINK)) < 0) TEST_ERROR
/* Check if the groups are equal */
if(compare_groups(gid, gid2, H5P_DEFAULT, -1, 0) != TRUE) TEST_ERROR
/* close the destination group */
if(H5Gclose(gid2) < 0) TEST_ERROR
/* close the source group */
if(H5Gclose(gid) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Sclose(sid);
H5Dclose(did);
H5Gclose(gid2);
H5Gclose(gid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_group_links */
/*-------------------------------------------------------------------------
* Function: test_copy_soft_link
*
* Purpose: Create a soft link in SRC file and copy it to DST file
* copy a datast pointed by a soft link to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Quincey Koziol
* Tuesday, September 30, 2005
*
*-------------------------------------------------------------------------
*/
static int
test_copy_soft_link(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t sid = -1; /* Dataspace ID */
hid_t did = -1, did2 = -1; /* Dataset IDs */
hid_t gid = -1; /* Group ID */
hsize_t dim2d[2];
int buf[DIM_SIZE_1][DIM_SIZE_2];
int i, j;
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): object through soft link");
/* set initial data values */
for (i=0; i<DIM_SIZE_1; i++)
for (j=0; j<DIM_SIZE_2; j++)
buf[i][j] = 10000 + 100*i+j;
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* create group at the SRC file */
if((gid = H5Gcreate(fid_src, NAME_GROUP_LINK, (size_t)0)) < 0) TEST_ERROR
/* attach attributes to the group */
if(test_copy_attach_attributes(gid, H5T_NATIVE_INT) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim2d[0]=DIM_SIZE_1;
dim2d[1]=DIM_SIZE_2;
/* create dataspace */
if((sid = H5Screate_simple(2, dim2d, NULL)) < 0) TEST_ERROR
/* add a dataset to the group */
if((did = H5Dcreate(fid_src, NAME_LINK_DATASET, H5T_NATIVE_INT, sid, H5P_DEFAULT) ) < 0) TEST_ERROR
if(H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* make a soft link to the dataset */
if(H5Glink(fid_src, H5L_TYPE_SOFT, NAME_LINK_DATASET, NAME_LINK_SOFT) < 0) TEST_ERROR
/* close the group */
if(H5Gclose(gid) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate(fid_dst, NAME_GROUP_UNCOPIED, (size_t)0)) < 0) TEST_ERROR
/* copy the dataset from SRC to DST */
if(H5Ocopy(fid_src, NAME_LINK_SOFT, fid_dst, NAME_DATASET_SIMPLE, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the dataset through the soft link for copy */
if((did = H5Dopen(fid_src, NAME_LINK_SOFT)) < 0) TEST_ERROR
/* open the destination dataset */
if((did2 = H5Dopen(fid_dst, NAME_DATASET_SIMPLE)) < 0) TEST_ERROR
/* Check if the datasets are equal */
if(compare_datasets(did, did2, H5P_DEFAULT, buf) != TRUE) TEST_ERROR
/* close the destination dataset */
if(H5Dclose(did2) < 0) TEST_ERROR
/* close the source dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Sclose(sid);
H5Dclose(did2);
H5Dclose(did);
H5Gclose(gid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_soft_link */
/*-------------------------------------------------------------------------
* Function: test_copy_ext_link
*
* Purpose: Create an external link in SRC file and copy it to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: James Laird
* Friday, June 16, 2006
*
*-------------------------------------------------------------------------
*/
static int
test_copy_ext_link(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1, fid_ext = -1; /* File IDs */
hid_t sid = -1; /* Dataspace ID */
hid_t did = -1, did2 = -1; /* Dataset IDs */
hid_t gid = -1; /* Group ID */
hsize_t dim2d[2];
int buf[DIM_SIZE_1][DIM_SIZE_2];
int i, j;
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
char ext_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): object through external link");
/* set initial data values */
for (i=0; i<DIM_SIZE_1; i++)
for (j=0; j<DIM_SIZE_2; j++)
buf[i][j] = 10000 + 100*i+j;
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
h5_fixname(FILENAME[2], fapl, ext_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* create group at the SRC file */
if((gid = H5Gcreate(fid_src, NAME_GROUP_LINK, (size_t)0)) < 0) TEST_ERROR
/* attach attributes to the group */
if(test_copy_attach_attributes(gid, H5T_NATIVE_INT) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim2d[0]=DIM_SIZE_1;
dim2d[1]=DIM_SIZE_2;
/* create dataspace */
if((sid = H5Screate_simple(2, dim2d, NULL)) < 0) TEST_ERROR
/* add a dataset to the group */
if((did = H5Dcreate(fid_src, NAME_LINK_DATASET, H5T_NATIVE_INT, sid, H5P_DEFAULT) ) < 0) TEST_ERROR
if(H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the group */
if(H5Gclose(gid) < 0) TEST_ERROR
/* create file to hold external links to the src file */
if((fid_ext = H5Fcreate(ext_filename, H5F_ACC_TRUNC, H5P_DEFAULT, fapl)) < 0) TEST_ERROR
/* create group in the file that will hold the external link */
if((gid = H5Gcreate(fid_ext, NAME_GROUP_LINK, (size_t)0)) < 0) TEST_ERROR
/* Create an external link to the dataset in the source file */
if(H5Lcreate_external(src_filename, NAME_LINK_DATASET, fid_ext, NAME_LINK_EXTERN, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* close the group and file */
if(H5Gclose(gid) < 0) TEST_ERROR
if(H5Fclose(fid_ext) < 0) TEST_ERROR
/* open the "extern" file with read-only */
if((fid_ext = H5Fopen(ext_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate(fid_dst, NAME_GROUP_UNCOPIED, (size_t)0)) < 0) TEST_ERROR
/* copy the dataset from SRC to DST */
if(H5Ocopy(fid_ext, NAME_LINK_EXTERN, fid_dst, NAME_DATASET_SIMPLE, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the dataset through the external link */
if((did = H5Dopen(fid_ext, NAME_LINK_EXTERN)) < 0) TEST_ERROR
/* open the destination dataset */
if((did2 = H5Dopen(fid_dst, NAME_DATASET_SIMPLE)) < 0) TEST_ERROR
/* Check if the datasets are equal */
if(compare_datasets(did, did2, H5P_DEFAULT, buf) != TRUE) TEST_ERROR
/* close the destination dataset */
if(H5Dclose(did2) < 0) TEST_ERROR
/* close the source dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the EXT file */
if(H5Fclose(fid_ext) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Sclose(sid);
H5Dclose(did2);
H5Dclose(did);
H5Gclose(gid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_ext_link */
/*-------------------------------------------------------------------------
* Function: test_copy_exist
*
* Purpose: Create a simple dataset in SRC file and copy it onto an
* existing object in DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Quincey Koziol
* Tuesday, November 8, 2005
*
*-------------------------------------------------------------------------
*/
static int
test_copy_exist(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t sid = -1; /* Dataspace ID */
hid_t did = -1; /* Dataset IDs */
int buf[DIM_SIZE_1][DIM_SIZE_2]; /* Buffer for writing data */
hsize_t dim2d[2]; /* Dataset dimensions */
int i, j; /* local index variables */
herr_t ret; /* Generic return value */
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): existing object");
/* Initialize write buffer */
for (i=0; i<DIM_SIZE_1; i++)
for (j=0; j<DIM_SIZE_2; j++)
buf[i][j] = 10000 + 100*i+j;
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim2d[0] = DIM_SIZE_1;
dim2d[1] = DIM_SIZE_2;
/* create 2D dataspace */
if((sid = H5Screate_simple(2, dim2d, NULL)) < 0) TEST_ERROR
/* create 2D int dataset at SRC file */
if((did = H5Dcreate(fid_src, NAME_DATASET_SIMPLE, H5T_NATIVE_INT, sid, H5P_DEFAULT)) < 0) TEST_ERROR
/* write data into file */
if(H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
/* attach attributes to the dataset */
if(test_copy_attach_attributes(did, H5T_NATIVE_INT) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate(fid_dst, NAME_GROUP_UNCOPIED, (size_t)0)) < 0) TEST_ERROR
/* copy the dataset from SRC to DST */
if(H5Ocopy(fid_src, NAME_DATASET_SIMPLE,fid_dst, NAME_DATASET_SIMPLE, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* try to copy the dataset from SRC to DST again (should fail) */
H5E_BEGIN_TRY {
ret = H5Ocopy(fid_src, NAME_DATASET_SIMPLE, fid_dst, NAME_DATASET_SIMPLE, H5P_DEFAULT, H5P_DEFAULT);
} H5E_END_TRY;
if( ret >= 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Dclose(did);
H5Sclose(sid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_exist */
/*-------------------------------------------------------------------------
* Function: test_copy_path
*
* Purpose: Create a simple dataset in SRC file and copy it to DST file
* using a full path name
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Quincey Koziol
* Tuesday, November 8, 2005
*
*-------------------------------------------------------------------------
*/
static int
test_copy_path(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t sid = -1; /* Dataspace ID */
hid_t did = -1, did2 = -1; /* Dataset IDs */
hid_t gid = -1; /* Group ID */
int buf[DIM_SIZE_1][DIM_SIZE_2]; /* Buffer for writing data */
hsize_t dim2d[2]; /* Dataset dimensions */
int i, j; /* local index variables */
herr_t ret; /* Generic return value */
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): full path");
/* Initialize write buffer */
for (i=0; i<DIM_SIZE_1; i++)
for (j=0; j<DIM_SIZE_2; j++)
buf[i][j] = 10000 + 100*i+j;
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim2d[0] = DIM_SIZE_1;
dim2d[1] = DIM_SIZE_2;
/* create 2D dataspace */
if((sid = H5Screate_simple(2, dim2d, NULL)) < 0) TEST_ERROR
/* create 2D int dataset at SRC file */
if((did = H5Dcreate(fid_src, NAME_DATASET_SIMPLE, H5T_NATIVE_INT, sid, H5P_DEFAULT)) < 0) TEST_ERROR
/* write data into file */
if(H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
/* attach attributes to the dataset */
if(test_copy_attach_attributes(did, H5T_NATIVE_INT) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate(fid_dst, NAME_GROUP_UNCOPIED, (size_t)0)) < 0) TEST_ERROR
/* copy the dataset from SRC to DST (should fail - intermediate groups not there) */
H5E_BEGIN_TRY {
ret = H5Ocopy(fid_src, NAME_DATASET_SUB_SUB, fid_dst, NAME_DATASET_SUB_SUB, H5P_DEFAULT, H5P_DEFAULT);
} H5E_END_TRY;
if( ret >= 0) TEST_ERROR
/* Create the intermediate groups in destination file */
if((gid = H5Gcreate(fid_dst, NAME_GROUP_TOP, (size_t)0)) < 0) TEST_ERROR
if(H5Gclose(gid) < 0) TEST_ERROR
if((gid = H5Gcreate(fid_dst, NAME_GROUP_SUB, (size_t)0)) < 0) TEST_ERROR
if(H5Gclose(gid) < 0) TEST_ERROR
if((gid = H5Gcreate(fid_dst, NAME_GROUP_SUB_SUB, (size_t)0)) < 0) TEST_ERROR
if(H5Gclose(gid) < 0) TEST_ERROR
/* copy the dataset from SRC to DST, using full path */
if(H5Ocopy(fid_src, NAME_DATASET_SIMPLE, fid_dst, NAME_DATASET_SUB_SUB, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the dataset for copy */
if((did = H5Dopen(fid_src, NAME_DATASET_SIMPLE)) < 0) TEST_ERROR
/* open the destination dataset */
if((did2 = H5Dopen(fid_dst, NAME_DATASET_SUB_SUB)) < 0) TEST_ERROR
/* Check if the datasets are equal */
if(compare_datasets(did, did2, H5P_DEFAULT, buf) != TRUE) TEST_ERROR
/* close the destination dataset */
if(H5Dclose(did2) < 0) TEST_ERROR
/* close the source dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Dclose(did2);
H5Dclose(did);
H5Sclose(sid);
H5Gclose(gid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_path */
/*-------------------------------------------------------------------------
* Function: test_copy_same_file_named_datatype
*
* Purpose: Create name datatype in SRC file and copy it to same file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Quincey Koziol
* Tuesday, November 8, 2005
*
*-------------------------------------------------------------------------
*/
static int
test_copy_same_file_named_datatype(hid_t fcpl_src, hid_t fapl)
{
hid_t fid = -1; /* File ID */
hid_t tid = -1, tid2 = -1; /* Datatype IDs */
char filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): named datatype in same file");
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, filename, sizeof filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid = H5Fcreate(filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* create datatype */
if((tid = H5Tcopy(H5T_NATIVE_INT)) < 0) TEST_ERROR
/* create named datatype */
if((H5Tcommit(fid, NAME_DATATYPE_SIMPLE, tid)) < 0) TEST_ERROR
/* copy the datatype from SRC to DST */
if(H5Ocopy(fid, NAME_DATATYPE_SIMPLE, fid, NAME_DATATYPE_SIMPLE2, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the copied datatype */
if((tid2 = H5Topen(fid, NAME_DATATYPE_SIMPLE2)) < 0) TEST_ERROR
/* Compare the datatypes */
if(H5Tequal(tid, tid2) != TRUE) TEST_ERROR
/* close the destination datatype */
if(H5Tclose(tid2) < 0) TEST_ERROR
/* close the source datatype */
if(H5Tclose(tid) < 0) TEST_ERROR
/* close the file */
if(H5Fclose(fid) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Tclose(tid2);
H5Tclose(tid);
H5Fclose(fid);
} H5E_END_TRY;
return 1;
} /* end test_copy_same_file_named_datatype */
/*-------------------------------------------------------------------------
* Function: test_copy_old_layout
*
* Purpose: Copy dataset that uses the "old" layout version (pre version 3)
* format.
*
* Note: This test uses the "fill_old.h5" file for convenience, since it
* has a dataset with the old layout format.
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Quincey Koziol
* Thursday, November 30, 2006
*
*-------------------------------------------------------------------------
*/
static int
test_copy_old_layout(hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t did = -1, did2 = -1; /* Dataset IDs */
char *srcdir = HDgetenv("srcdir"); /* Where the src code is located */
char src_filename[NAME_BUF_SIZE] = "";
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): dataset with old layout format");
/* Generate correct name for source file by prepending the source path */
if(srcdir && ((HDstrlen(srcdir) + HDstrlen(FILE_OLD_LAYOUT) + 1) < sizeof(src_filename))) {
HDstrcpy(src_filename, srcdir);
HDstrcat(src_filename, "/");
} /* end if */
HDstrcat(src_filename, FILE_OLD_LAYOUT);
/* Initialize the destination filename */
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* open source file (read-only) */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate(fid_dst, NAME_GROUP_UNCOPIED, (size_t)0)) < 0) TEST_ERROR
/* copy the dataset from SRC to DST */
if(H5Ocopy(fid_src, NAME_OLD_FORMAT, fid_dst, NAME_DATASET_SIMPLE, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the source dataset */
if((did = H5Dopen(fid_src, NAME_OLD_FORMAT)) < 0) TEST_ERROR
/* open the destination dataset */
if((did2 = H5Dopen(fid_dst, NAME_DATASET_SIMPLE)) < 0) TEST_ERROR
/* Check if the datasets are equal */
if(compare_datasets(did, did2, H5P_DEFAULT, NULL) != TRUE) TEST_ERROR
/* close the destination dataset */
if(H5Dclose(did2) < 0) TEST_ERROR
/* close the source dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Dclose(did2);
H5Dclose(did);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_old_layout */
/*-------------------------------------------------------------------------
* Function: test_copy_dataset_compact_named_vl
*
* Purpose: Create a dataset that uses a named variable length datatype
* in SRC file and copy it to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Peter Cao
* Saturday, February 4, 2006
*
*-------------------------------------------------------------------------
*/
static int
test_copy_dataset_compact_named_vl(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t tid = -1, tid_copy=-1; /* Datatype ID */
hid_t sid = -1; /* Dataspace ID */
hid_t pid = -1; /* Dataset creation property list ID */
hid_t did = -1, did2 = -1; /* Dataset IDs */
unsigned int i, j; /* Local index variables */
hsize_t dim1d[1]; /* Dataset dimensions */
hvl_t buf[DIM_SIZE_1]; /* Buffer for writing data */
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): compact dataset with named VLEN datatype");
/* set initial data values */
for(i = 0; i < DIM_SIZE_1; i++) {
buf[i].len = i+1;
buf[i].p = (int *)HDmalloc(buf[i].len * sizeof(int));
for(j = 0; j < buf[i].len; j++)
((int *)buf[i].p)[j] = i*10+j;
} /* end for */
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim1d[0]=DIM_SIZE_1;
/* create dataspace */
if((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR
/* create datatype */
if((tid = H5Tvlen_create(H5T_NATIVE_INT)) < 0) TEST_ERROR
/* make a copy of the datatype for later use */
if((tid_copy = H5Tcopy(tid)) < 0)TEST_ERROR
/* named data type */
if((H5Tcommit(fid_src, NAME_DATATYPE_VL, tid)) < 0) TEST_ERROR
/* create and set compact plist */
if((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR
if(H5Pset_layout(pid, H5D_COMPACT) < 0) TEST_ERROR
/* create dataset at SRC file */
if((did = H5Dcreate(fid_src, NAME_DATASET_VL, tid, sid, pid)) < 0) TEST_ERROR
/* write data into file */
if(H5Dwrite(did, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close compact plist */
if(H5Pclose(pid) < 0) TEST_ERROR
/* close the datatype */
if(H5Tclose(tid) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate(fid_dst, NAME_GROUP_UNCOPIED, (size_t)0)) < 0) TEST_ERROR
/* copy the dataset from SRC to DST */
if(H5Ocopy(fid_src, NAME_DATASET_VL, fid_dst, NAME_DATASET_VL, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the dataset for copy */
if((did = H5Dopen(fid_src, NAME_DATASET_VL)) < 0) TEST_ERROR
/* open the destination dataset */
if((did2 = H5Dopen(fid_dst, NAME_DATASET_VL)) < 0) TEST_ERROR
/* Check if the datasets are equal */
if(compare_datasets(did, did2, H5P_DEFAULT, buf) != TRUE) TEST_ERROR
/* close the destination dataset */
if(H5Dclose(did2) < 0) TEST_ERROR
/* close the source dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
/* Reclaim vlen buffer */
if(H5Dvlen_reclaim(tid_copy, sid, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close datatype */
if(H5Tclose(tid_copy) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Pclose(pid);
H5Dclose(did2);
H5Dclose(did);
H5Dvlen_reclaim(tid_copy, sid, H5P_DEFAULT, buf);
H5Tclose(tid);
H5Tclose(tid_copy);
H5Sclose(sid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_dataset_compact_named_vl */
/*-------------------------------------------------------------------------
* Function: test_copy_dataset_contig_named_vl
*
* Purpose: Create a dataset that uses a named variable length datatype
* in SRC file and copy it to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Peter Cao
* Saturday, February 11, 2006
*
*-------------------------------------------------------------------------
*/
static int
test_copy_dataset_contig_named_vl(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t tid = -1, tid_copy=-1; /* Datatype ID */
hid_t sid = -1; /* Dataspace ID */
hid_t did = -1, did2 = -1; /* Dataset IDs */
unsigned int i, j; /* Local index variables */
hsize_t dim1d[1]; /* Dataset dimensions */
hvl_t buf[DIM_SIZE_1]; /* Buffer for writing data */
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): contigous dataset with named VLEN datatype");
/* set initial data values */
for(i = 0; i < DIM_SIZE_1; i++) {
buf[i].len = i+1;
buf[i].p = (int *)HDmalloc(buf[i].len * sizeof(int));
for(j = 0; j < buf[i].len; j++)
((int *)buf[i].p)[j] = i*10+j;
} /* end for */
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim1d[0]=DIM_SIZE_1;
/* create dataspace */
if((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR
/* create datatype */
if((tid = H5Tvlen_create(H5T_NATIVE_INT)) < 0) TEST_ERROR
/* make a copy of the datatype for later use */
if((tid_copy = H5Tcopy(tid)) < 0)TEST_ERROR
/* named data type */
if((H5Tcommit(fid_src, NAME_DATATYPE_VL, tid)) < 0) TEST_ERROR
/* create dataset at SRC file */
if((did = H5Dcreate(fid_src, NAME_DATASET_VL, tid, sid, H5P_DEFAULT)) < 0) TEST_ERROR
/* write data into file */
if(H5Dwrite(did, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close the datatype */
if(H5Tclose(tid) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate(fid_dst, NAME_GROUP_UNCOPIED, (size_t)0)) < 0) TEST_ERROR
/* copy the dataset from SRC to DST */
if(H5Ocopy(fid_src, NAME_DATASET_VL, fid_dst, NAME_DATASET_VL, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the dataset for copy */
if((did = H5Dopen(fid_src, NAME_DATASET_VL)) < 0) TEST_ERROR
/* open the destination dataset */
if((did2 = H5Dopen(fid_dst, NAME_DATASET_VL)) < 0) TEST_ERROR
/* Check if the datasets are equal */
if(compare_datasets(did, did2, H5P_DEFAULT, buf) != TRUE) TEST_ERROR
/* close the destination dataset */
if(H5Dclose(did2) < 0) TEST_ERROR
/* close the source dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
/* Reclaim vlen buffer */
if(H5Dvlen_reclaim(tid_copy, sid, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close datatype */
if(H5Tclose(tid_copy) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Dclose(did2);
H5Dclose(did);
H5Dvlen_reclaim(tid_copy, sid, H5P_DEFAULT, buf);
H5Tclose(tid);
H5Tclose(tid_copy);
H5Sclose(sid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_dataset_contig_named_vl */
/*-------------------------------------------------------------------------
* Function: test_copy_dataset_chunked_named_vl
*
* Purpose: Create a dataset that uses a named variable length datatype
* in SRC file and copy it to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Peter Cao
* Saturday, February 11, 2006
*
*-------------------------------------------------------------------------
*/
static int
test_copy_dataset_chunked_named_vl(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t tid = -1, tid_copy=-1; /* Datatype ID */
hid_t sid = -1; /* Dataspace ID */
hid_t pid = -1; /* Dataset creation property list ID */
hid_t did = -1, did2 = -1; /* Dataset IDs */
unsigned int i, j; /* Local index variables */
hsize_t dim1d[1]; /* Dataset dimensions */
hvl_t buf[DIM_SIZE_1]; /* Buffer for writing data */
hsize_t chunk_dim1d[1] = {CHUNK_SIZE_1}; /* Chunk dimensions */
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): chunked dataset with named VLEN datatype");
/* set initial data values */
for(i = 0; i < DIM_SIZE_1; i++) {
buf[i].len = i+1;
buf[i].p = (int *)HDmalloc(buf[i].len * sizeof(int));
for(j = 0; j < buf[i].len; j++)
((int *)buf[i].p)[j] = i*10+j;
} /* end for */
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim1d[0]=DIM_SIZE_1;
/* create dataspace */
if((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR
/* create datatype */
if((tid = H5Tvlen_create(H5T_NATIVE_INT)) < 0) TEST_ERROR
/* make a copy of the datatype for later use */
if((tid_copy = H5Tcopy(tid)) < 0)TEST_ERROR
/* named data type */
if((H5Tcommit(fid_src, NAME_DATATYPE_VL, tid)) < 0) TEST_ERROR
/* create and set chunk plist */
if((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR
if(H5Pset_chunk(pid, 1, chunk_dim1d) < 0) TEST_ERROR
/* create dataset at SRC file */
if((did = H5Dcreate(fid_src, NAME_DATASET_VL, tid, sid, pid)) < 0) TEST_ERROR
/* write data into file */
if(H5Dwrite(did, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close compact plist */
if(H5Pclose(pid) < 0) TEST_ERROR
/* close the datatype */
if(H5Tclose(tid) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate(fid_dst, NAME_GROUP_UNCOPIED, (size_t)0)) < 0) TEST_ERROR
/* copy the dataset from SRC to DST */
if(H5Ocopy(fid_src, NAME_DATASET_VL, fid_dst, NAME_DATASET_VL, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the dataset for copy */
if((did = H5Dopen(fid_src, NAME_DATASET_VL)) < 0) TEST_ERROR
/* open the destination dataset */
if((did2 = H5Dopen(fid_dst, NAME_DATASET_VL)) < 0) TEST_ERROR
/* Check if the datasets are equal */
if(compare_datasets(did, did2, H5P_DEFAULT, buf) != TRUE) TEST_ERROR
/* close the destination dataset */
if(H5Dclose(did2) < 0) TEST_ERROR
/* close the source dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
/* Reclaim vlen buffer */
if(H5Dvlen_reclaim(tid_copy, sid, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close datatype */
if(H5Tclose(tid_copy) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Pclose(pid);
H5Dclose(did2);
H5Dclose(did);
H5Dvlen_reclaim(tid_copy, sid, H5P_DEFAULT, buf);
H5Tclose(tid);
H5Tclose(tid_copy);
H5Sclose(sid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_dataset_chunked_named_vl */
/*-------------------------------------------------------------------------
* Function: test_copy_dataset_compressed_named_vl
*
* Purpose: Create a dataset that uses a named variable length datatype
* in SRC file and copy it to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Peter Cao
* Saturday, February 11, 2006
*
*-------------------------------------------------------------------------
*/
static int
test_copy_dataset_compressed_named_vl(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t tid = -1, tid_copy=-1; /* Datatype ID */
hid_t sid = -1; /* Dataspace ID */
hid_t pid = -1; /* Dataset creation property list ID */
hid_t did = -1, did2 = -1; /* Dataset IDs */
unsigned int i, j; /* Local index variables */
hsize_t dim1d[1]; /* Dataset dimensions */
hvl_t buf[DIM_SIZE_1]; /* Buffer for writing data */
hsize_t chunk_dim1d[1] = {CHUNK_SIZE_1}; /* Chunk dimensions */
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): compressed dataset with named VLEN datatype");
/* set initial data values */
for(i = 0; i < DIM_SIZE_1; i++) {
buf[i].len = i+1;
buf[i].p = (int *)HDmalloc(buf[i].len * sizeof(int));
for(j = 0; j < buf[i].len; j++)
((int *)buf[i].p)[j] = i*10+j;
} /* end for */
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim1d[0]=DIM_SIZE_1;
/* create dataspace */
if((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR
/* create datatype */
if((tid = H5Tvlen_create(H5T_NATIVE_INT)) < 0) TEST_ERROR
/* make a copy of the datatype for later use */
if((tid_copy = H5Tcopy(tid)) < 0)TEST_ERROR
/* named data type */
if((H5Tcommit(fid_src, NAME_DATATYPE_VL, tid)) < 0) TEST_ERROR
/* create and set chunk plist */
if((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR
if(H5Pset_chunk(pid, 1, chunk_dim1d) < 0) TEST_ERROR
if(H5Pset_deflate(pid, 9) < 0) TEST_ERROR
/* create dataset at SRC file */
if((did = H5Dcreate(fid_src, NAME_DATASET_VL, tid, sid, pid)) < 0) TEST_ERROR
/* write data into file */
if(H5Dwrite(did, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close compact plist */
if(H5Pclose(pid) < 0) TEST_ERROR
/* close the datatype */
if(H5Tclose(tid) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate(fid_dst, NAME_GROUP_UNCOPIED, (size_t)0)) < 0) TEST_ERROR
/* copy the dataset from SRC to DST */
if(H5Ocopy(fid_src, NAME_DATASET_VL, fid_dst, NAME_DATASET_VL, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the dataset for copy */
if((did = H5Dopen(fid_src, NAME_DATASET_VL)) < 0) TEST_ERROR
/* open the destination dataset */
if((did2 = H5Dopen(fid_dst, NAME_DATASET_VL)) < 0) TEST_ERROR
/* Check if the datasets are equal */
if(compare_datasets(did, did2, H5P_DEFAULT, buf) != TRUE) TEST_ERROR
/* close the destination dataset */
if(H5Dclose(did2) < 0) TEST_ERROR
/* close the source dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
/* Reclaim vlen buffer */
if(H5Dvlen_reclaim(tid_copy, sid, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close datatype */
if(H5Tclose(tid_copy) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Pclose(pid);
H5Dclose(did2);
H5Dclose(did);
H5Dvlen_reclaim(tid_copy, sid, H5P_DEFAULT, buf);
H5Tclose(tid);
H5Tclose(tid_copy);
H5Sclose(sid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_dataset_compressed_named_vl */
/*-------------------------------------------------------------------------
* Function: test_copy_dataset_compact_vl_vl
*
* Purpose: Create a compact dataset w/nested VLEN datatype
* in SRC file and copy it to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Peter Cao
* Saturday, February 11, 2006
*
*-------------------------------------------------------------------------
*/
static int
test_copy_dataset_compact_vl_vl(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t tid=-1, tid2=-1; /* Datatype ID */
hid_t sid = -1; /* Dataspace ID */
hid_t pid = -1; /* Dataset creation property list ID */
hid_t did = -1, did2 = -1; /* Dataset IDs */
unsigned int i, j, k; /* Local index variables */
hsize_t dim1d[1]; /* Dataset dimensions */
hvl_t buf[DIM_SIZE_1]; /* Buffer for writing data */
hvl_t *tvl; /* Temporary pointer to VL information */
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): compact dataset with nested VLEN datatype");
/* set initial data values */
for(i=0; i<DIM_SIZE_1; i++) {
buf[i].p=HDmalloc((i+1)*sizeof(hvl_t));
if(buf[i].p==NULL) {
TestErrPrintf("Cannot allocate memory for VL data! i=%u\n",i);
return 1;
} /* end if */
buf[i].len=i+1;
for(tvl=buf[i].p,j=0; j<(i+1); j++, tvl++) {
tvl->p=HDmalloc((j+1)*sizeof(unsigned int));
if(tvl->p==NULL) {
TestErrPrintf("Cannot allocate memory for VL data! i=%u, j=%u\n",i,j);
return 1;
} /* end if */
tvl->len=j+1;
for(k=0; k<(j+1); k++)
((unsigned int *)tvl->p)[k]=i*100+j*10+k;
} /* end for */
} /* end for */
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim1d[0]=DIM_SIZE_1;
/* create dataspace */
if((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR
/* create datatype */
if((tid = H5Tvlen_create(H5T_NATIVE_INT)) < 0) TEST_ERROR
/* create nested VL datatype */
if((tid2 = H5Tvlen_create(tid)) < 0) TEST_ERROR
/* create and set compact plist */
if((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR
if(H5Pset_layout(pid, H5D_COMPACT) < 0) TEST_ERROR
/* create dataset at SRC file */
if((did = H5Dcreate(fid_src, NAME_DATASET_VL_VL, tid2, sid, pid)) < 0) TEST_ERROR
/* write data into file */
if(H5Dwrite(did, tid2, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close compact plist */
if(H5Pclose(pid) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate(fid_dst, NAME_GROUP_UNCOPIED, (size_t)0)) < 0) TEST_ERROR
/* copy the dataset from SRC to DST */
if(H5Ocopy(fid_src, NAME_DATASET_VL_VL, fid_dst, NAME_DATASET_VL_VL, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the dataset for copy */
if((did = H5Dopen(fid_src, NAME_DATASET_VL_VL)) < 0) TEST_ERROR
/* open the destination dataset */
if((did2 = H5Dopen(fid_dst, NAME_DATASET_VL_VL)) < 0) TEST_ERROR
/* Check if the datasets are equal */
if(compare_datasets(did, did2, H5P_DEFAULT, buf) != TRUE) TEST_ERROR
/* close the destination dataset */
if(H5Dclose(did2) < 0) TEST_ERROR
/* close the source dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
/* Reclaim vlen buffer */
if(H5Dvlen_reclaim(tid2, sid, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close datatype */
if(H5Tclose(tid) < 0) TEST_ERROR
if(H5Tclose(tid2) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Dclose(did2);
H5Dclose(did);
H5Dvlen_reclaim(tid2, sid, H5P_DEFAULT, buf);
H5Tclose(tid);
H5Tclose(tid2);
H5Sclose(sid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_dataset_compact_vl_vl */
/*-------------------------------------------------------------------------
* Function: test_copy_dataset_contig_vl_vl
*
* Purpose: Create a compact dataset w/nested VLEN datatype
* in SRC file and copy it to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Peter Cao
* Saturday, February 11, 2006
*
*-------------------------------------------------------------------------
*/
static int
test_copy_dataset_contig_vl_vl(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t tid=-1, tid2=-1; /* Datatype ID */
hid_t sid = -1; /* Dataspace ID */
hid_t pid = -1; /* Dataset creation property list ID */
hid_t did = -1, did2 = -1; /* Dataset IDs */
unsigned int i, j, k; /* Local index variables */
hsize_t dim1d[1]; /* Dataset dimensions */
hvl_t buf[DIM_SIZE_1]; /* Buffer for writing data */
hvl_t *tvl; /* Temporary pointer to VL information */
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): contigous dataset with nested VLEN datatype");
/* set initial data values */
for(i=0; i<DIM_SIZE_1; i++) {
buf[i].p=HDmalloc((i+1)*sizeof(hvl_t));
if(buf[i].p==NULL) {
TestErrPrintf("Cannot allocate memory for VL data! i=%u\n",i);
TEST_ERROR
} /* end if */
buf[i].len=i+1;
for(tvl=buf[i].p,j=0; j<(i+1); j++, tvl++) {
tvl->p=HDmalloc((j+1)*sizeof(unsigned int));
if(tvl->p==NULL) {
TestErrPrintf("Cannot allocate memory for VL data! i=%u, j=%u\n",i,j);
TEST_ERROR
} /* end if */
tvl->len=j+1;
for(k=0; k<(j+1); k++)
((unsigned int *)tvl->p)[k]=i*100+j*10+k;
} /* end for */
} /* end for */
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim1d[0]=DIM_SIZE_1;
/* create dataspace */
if((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR
/* create datatype */
if((tid = H5Tvlen_create(H5T_NATIVE_INT)) < 0) TEST_ERROR
/* create nested VL datatype */
if((tid2 = H5Tvlen_create(tid)) < 0) TEST_ERROR
/* create and set compact plist */
if((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR
/* create dataset at SRC file */
if((did = H5Dcreate(fid_src, NAME_DATASET_VL_VL, tid2, sid, H5P_DEFAULT)) < 0) TEST_ERROR
/* write data into file */
if(H5Dwrite(did, tid2, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close compact plist */
if(H5Pclose(pid) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination files aren't the same */
if(H5Gclose(H5Gcreate(fid_dst, NAME_GROUP_UNCOPIED, (size_t)0)) < 0) TEST_ERROR
/* copy the dataset from SRC to DST */
if(H5Ocopy(fid_src, NAME_DATASET_VL_VL, fid_dst, NAME_DATASET_VL_VL, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the dataset for copy */
if((did = H5Dopen(fid_src, NAME_DATASET_VL_VL)) < 0) TEST_ERROR
/* open the destination dataset */
if((did2 = H5Dopen(fid_dst, NAME_DATASET_VL_VL)) < 0) TEST_ERROR
/* Check if the datasets are equal */
if(compare_datasets(did, did2, H5P_DEFAULT, buf) != TRUE) TEST_ERROR
/* close the destination dataset */
if(H5Dclose(did2) < 0) TEST_ERROR
/* close the source dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
/* Reclaim vlen buffer */
if(H5Dvlen_reclaim(tid2, sid, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close datatype */
if(H5Tclose(tid) < 0) TEST_ERROR
if(H5Tclose(tid2) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Dclose(did2);
H5Dclose(did);
H5Dvlen_reclaim(tid2, sid, H5P_DEFAULT, buf);
H5Tclose(tid);
H5Tclose(tid2);
H5Sclose(sid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_dataset_contig_vl_vl */
/*-------------------------------------------------------------------------
* Function: test_copy_dataset_chunked_vl_vl
*
* Purpose: Create a dataset that uses a named variable length datatype
* in SRC file and copy it to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Peter Cao
* Saturday, March 11, 2006
*
*-------------------------------------------------------------------------
*/
static int
test_copy_dataset_chunked_vl_vl(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t tid = -1, tid2=-1; /* Datatype ID */
hid_t sid = -1; /* Dataspace ID */
hid_t pid = -1; /* Dataset creation property list ID */
hid_t did = -1, did2 = -1; /* Dataset IDs */
unsigned int i, j, k; /* Local index variables */
hsize_t dim1d[1]; /* Dataset dimensions */
hvl_t buf[DIM_SIZE_1]; /* Buffer for writing data */
hvl_t *tvl; /* Temporary pointer to VL information */
hsize_t chunk_dim1d[1] = {CHUNK_SIZE_1}; /* Chunk dimensions */
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): chunked dataset with nested VLEN datatype");
/* set initial data values */
for(i=0; i<DIM_SIZE_1; i++) {
buf[i].p=HDmalloc((i+1)*sizeof(hvl_t));
if(buf[i].p==NULL) {
TestErrPrintf("Cannot allocate memory for VL data! i=%u\n",i);
TEST_ERROR
} /* end if */
buf[i].len=i+1;
for(tvl=buf[i].p,j=0; j<(i+1); j++, tvl++) {
tvl->p=HDmalloc((j+1)*sizeof(unsigned int));
if(tvl->p==NULL) {
TestErrPrintf("Cannot allocate memory for VL data! i=%u, j=%u\n",i,j);
TEST_ERROR
} /* end if */
tvl->len=j+1;
for(k=0; k<(j+1); k++)
((unsigned int *)tvl->p)[k]=i*100+j*10+k;
} /* end for */
} /* end for */
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim1d[0]=DIM_SIZE_1;
/* create dataspace */
if((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR
/* create datatype */
if((tid = H5Tvlen_create(H5T_NATIVE_INT)) < 0) TEST_ERROR
/* create nested VL datatype */
if((tid2 = H5Tvlen_create(tid)) < 0) TEST_ERROR
/* create and set chunk plist */
if((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR
if(H5Pset_chunk(pid, 1, chunk_dim1d) < 0) TEST_ERROR
/* create dataset at SRC file */
if((did = H5Dcreate(fid_src, NAME_DATASET_VL_VL, tid2, sid, pid)) < 0) TEST_ERROR
/* write data into file */
if(H5Dwrite(did, tid2, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close compact plist */
if(H5Pclose(pid) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
if(H5Gclose(H5Gcreate(fid_dst, NAME_GROUP_UNCOPIED, (size_t)0)) < 0) TEST_ERROR
/* copy the dataset from SRC to DST */
if(H5Ocopy(fid_src, NAME_DATASET_VL_VL, fid_dst, NAME_DATASET_VL_VL, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the dataset for copy */
if((did = H5Dopen(fid_src, NAME_DATASET_VL_VL)) < 0) TEST_ERROR
/* open the destination dataset */
if((did2 = H5Dopen(fid_dst, NAME_DATASET_VL_VL)) < 0) TEST_ERROR
/* Check if the datasets are equal */
if(compare_datasets(did, did2, H5P_DEFAULT, buf) != TRUE) TEST_ERROR
/* close the destination dataset */
if(H5Dclose(did2) < 0) TEST_ERROR
/* close the source dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
/* Reclaim vlen buffer */
if(H5Dvlen_reclaim(tid2, sid, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close datatype */
if(H5Tclose(tid) < 0) TEST_ERROR
if(H5Tclose(tid2) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Pclose(pid);
H5Dclose(did2);
H5Dclose(did);
H5Dvlen_reclaim(tid2, sid, H5P_DEFAULT, buf);
H5Tclose(tid);
H5Tclose(tid2);
H5Sclose(sid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_dataset_chunked_vl_vl */
/*-------------------------------------------------------------------------
* Function: test_copy_dataset_compressed_vl_vl
*
* Purpose: Create a dataset that uses a named variable length datatype
* in SRC file and copy it to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Peter Cao
* Saturday, March 11, 2006
*
*-------------------------------------------------------------------------
*/
static int
test_copy_dataset_compressed_vl_vl(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t tid = -1, tid2=-1; /* Datatype ID */
hid_t sid = -1; /* Dataspace ID */
hid_t pid = -1; /* Dataset creation property list ID */
hid_t did = -1, did2 = -1; /* Dataset IDs */
unsigned int i, j, k; /* Local index variables */
hsize_t dim1d[1]; /* Dataset dimensions */
hvl_t buf[DIM_SIZE_1]; /* Buffer for writing data */
hvl_t *tvl; /* Temporary pointer to VL information */
hsize_t chunk_dim1d[1] = {CHUNK_SIZE_1}; /* Chunk dimensions */
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING("H5Ocopy(): compressed dataset with nested VLEN datatype");
/* set initial data values */
for(i=0; i<DIM_SIZE_1; i++) {
buf[i].p=HDmalloc((i+1)*sizeof(hvl_t));
if(buf[i].p==NULL) {
TestErrPrintf("Cannot allocate memory for VL data! i=%u\n",i);
TEST_ERROR
} /* end if */
buf[i].len=i+1;
for(tvl=buf[i].p,j=0; j<(i+1); j++, tvl++) {
tvl->p=HDmalloc((j+1)*sizeof(unsigned int));
if(tvl->p==NULL) {
TestErrPrintf("Cannot allocate memory for VL data! i=%u, j=%u\n",i,j);
TEST_ERROR
} /* end if */
tvl->len=j+1;
for(k=0; k<(j+1); k++)
((unsigned int *)tvl->p)[k]=i*100+j*10+k;
} /* end for */
} /* end for */
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim1d[0]=DIM_SIZE_1;
/* create dataspace */
if((sid = H5Screate_simple(1, dim1d, NULL)) < 0) TEST_ERROR
/* create datatype */
if((tid = H5Tvlen_create(H5T_NATIVE_INT)) < 0) TEST_ERROR
/* create nested VL datatype */
if((tid2 = H5Tvlen_create(tid)) < 0) TEST_ERROR
/* create and set chunk plist */
if((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR
if(H5Pset_chunk(pid, 1, chunk_dim1d) < 0) TEST_ERROR
if(H5Pset_deflate(pid, 9) < 0) TEST_ERROR
/* create dataset at SRC file */
if((did = H5Dcreate(fid_src, NAME_DATASET_VL_VL, tid2, sid, pid)) < 0) TEST_ERROR
/* write data into file */
if(H5Dwrite(did, tid2, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close compact plist */
if(H5Pclose(pid) < 0) TEST_ERROR
/* close the dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
if(H5Gclose(H5Gcreate(fid_dst, NAME_GROUP_UNCOPIED, (size_t)0)) < 0) TEST_ERROR
/* copy the dataset from SRC to DST */
if(H5Ocopy(fid_src, NAME_DATASET_VL_VL, fid_dst, NAME_DATASET_VL_VL, H5P_DEFAULT, H5P_DEFAULT) < 0) TEST_ERROR
/* open the dataset for copy */
if((did = H5Dopen(fid_src, NAME_DATASET_VL_VL)) < 0) TEST_ERROR
/* open the destination dataset */
if((did2 = H5Dopen(fid_dst, NAME_DATASET_VL_VL)) < 0) TEST_ERROR
/* Check if the datasets are equal */
if(compare_datasets(did, did2, H5P_DEFAULT, buf) != TRUE) TEST_ERROR
/* close the destination dataset */
if(H5Dclose(did2) < 0) TEST_ERROR
/* close the source dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
/* Reclaim vlen buffer */
if(H5Dvlen_reclaim(tid2, sid, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close datatype */
if(H5Tclose(tid) < 0) TEST_ERROR
if(H5Tclose(tid2) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Pclose(pid);
H5Dclose(did2);
H5Dclose(did);
H5Dvlen_reclaim(tid2, sid, H5P_DEFAULT, buf);
H5Tclose(tid);
H5Tclose(tid2);
H5Sclose(sid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_dataset_compressed_vl_vl */
/*-------------------------------------------------------------------------
* Function: test_copy_option
*
* Purpose: Create a group in SRC file and copy it to DST file
*
* Return: Success: 0
* Failure: number of errors
*
* Programmer: Peter Cao
* March 11, 2006
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
static int
test_copy_option(hid_t fcpl_src, hid_t fcpl_dst, hid_t fapl, unsigned flag, hbool_t crt_intermediate_grp, const char* test_desciption)
{
hid_t fid_src = -1, fid_dst = -1; /* File IDs */
hid_t sid = -1; /* Dataspace ID */
hid_t did = -1; /* Dataset ID */
hid_t gid=-1, gid2=-1, gid_ref=-1; /* Group IDs */
hid_t gid_sub=-1, gid_sub_sub=-1; /* Sub-group ID */
hid_t pid=-1, lcpl_id=-1; /* Property IDs */
unsigned cpy_flags; /* Object copy flags */
int depth = -1; /* Copy depth */
hsize_t dim2d[2];
int buf[DIM_SIZE_1][DIM_SIZE_2];
int i, j;
char src_filename[NAME_BUF_SIZE];
char dst_filename[NAME_BUF_SIZE];
TESTING(test_desciption);
/* set initial data values */
for (i=0; i<DIM_SIZE_1; i++)
for (j=0; j<DIM_SIZE_2; j++)
buf[i][j] = 10000 + 100*i+j;
/* Initialize the filenames */
h5_fixname(FILENAME[0], fapl, src_filename, sizeof src_filename);
h5_fixname(FILENAME[1], fapl, dst_filename, sizeof dst_filename);
/* Reset file address checking info */
addr_reset();
/* create source file */
if((fid_src = H5Fcreate(src_filename, H5F_ACC_TRUNC, fcpl_src, fapl)) < 0) TEST_ERROR
/* create group at the SRC file */
if((gid = H5Gcreate(fid_src, NAME_GROUP_TOP, (size_t)0)) < 0) TEST_ERROR
/* attach attributes to the group */
if(test_copy_attach_attributes(gid, H5T_NATIVE_INT) < 0) TEST_ERROR
/* Set dataspace dimensions */
dim2d[0]=DIM_SIZE_1;
dim2d[1]=DIM_SIZE_2;
/* create dataspace */
if((sid = H5Screate_simple(2, dim2d, NULL)) < 0) TEST_ERROR
/* add a dataset to the top group */
if((did = H5Dcreate(gid, NAME_DATASET_SIMPLE, H5T_NATIVE_INT, sid, H5P_DEFAULT) ) < 0) TEST_ERROR
if(H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
if(H5Dclose(did) < 0) TEST_ERROR
/* create a sub-group */
if((gid_sub = H5Gcreate(fid_src, NAME_GROUP_SUB, (size_t)0)) < 0) TEST_ERROR
/* add a dataset to the sub group */
if((did = H5Dcreate(gid_sub, NAME_DATASET_SIMPLE, H5T_NATIVE_INT, sid, H5P_DEFAULT) ) < 0) TEST_ERROR
if(H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
if(H5Dclose(did) < 0) TEST_ERROR
/* create sub-sub-group */
if((gid_sub_sub = H5Gcreate(gid_sub, NAME_GROUP_SUB_SUB2, (size_t)0)) < 0) TEST_ERROR
/* add a dataset to the sub sub group */
if((did = H5Dcreate(gid_sub_sub, NAME_DATASET_SIMPLE, H5T_NATIVE_INT, sid, H5P_DEFAULT) ) < 0) TEST_ERROR
if(H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) TEST_ERROR
/* close dataset */
if(H5Dclose(did) < 0) TEST_ERROR
/* close dataspace */
if(H5Sclose(sid) < 0) TEST_ERROR
if(H5Gclose(gid_sub_sub) < 0) TEST_ERROR
if(H5Gclose(gid_sub) < 0) TEST_ERROR
/* close the group */
if(H5Gclose(gid) < 0) TEST_ERROR
if((flag & H5O_COPY_EXPAND_SOFT_LINK_FLAG) > 0) {
/* Create group to copy */
if((gid = H5Gcreate(fid_src, NAME_GROUP_LINK, (size_t)0)) < 0) TEST_ERROR
if(H5Glink(fid_src, H5L_TYPE_SOFT, NAME_DATASET_SUB_SUB, NAME_LINK_SOFT) < 0) TEST_ERROR
if(H5Glink(fid_src, H5L_TYPE_SOFT, "nowhere", NAME_LINK_SOFT_DANGLE) < 0) TEST_ERROR
if(H5Gclose(gid) < 0) TEST_ERROR
/* Create group to compare with */
if((gid = H5Gcreate(fid_src, NAME_GROUP_LINK2, (size_t)0)) < 0) TEST_ERROR
if(H5Glink(fid_src, H5L_TYPE_HARD, NAME_DATASET_SUB_SUB, NAME_LINK_SOFT2) < 0) TEST_ERROR
if(H5Glink(fid_src, H5L_TYPE_SOFT, "nowhere", NAME_LINK_SOFT_DANGLE2) < 0) TEST_ERROR
if(H5Gclose(gid) < 0) TEST_ERROR
} /* end if */
if((flag & H5O_COPY_EXPAND_REFERENCE_FLAG) > 0) {
if((gid_ref = H5Gcreate(fid_src, NAME_GROUP_REF, (size_t)0)) < 0) TEST_ERROR
/* create an attribute of object references */
if(attach_ref_attr(fid_src, gid_ref) < 0) TEST_ERROR
/* create an attribute of region references */
if(attach_reg_ref_attr(fid_src, gid_ref) < 0) TEST_ERROR
/* create a dataset of region references */
if(create_reg_ref_dataset(fid_src, gid_ref) < 0) TEST_ERROR
/* Close group holding reference objects */
if(H5Gclose(gid_ref) < 0) TEST_ERROR
} /* end if */
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* open the source file with read-only */
/* (except when expanding soft links */
if((flag & H5O_COPY_EXPAND_SOFT_LINK_FLAG) > 0) {
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDWR, fapl)) < 0) TEST_ERROR
} /* end if */
else
if((fid_src = H5Fopen(src_filename, H5F_ACC_RDONLY, fapl)) < 0) TEST_ERROR
/* create destination file */
if((fid_dst = H5Fcreate(dst_filename, H5F_ACC_TRUNC, fcpl_dst, fapl)) < 0) TEST_ERROR
/* Create an uncopied object in destination file so that addresses in source and destination
files aren't the same */
if(H5Gclose(H5Gcreate(fid_dst, NAME_GROUP_UNCOPIED, (size_t)0)) < 0) TEST_ERROR
/* create property to pass copy options */
if((pid = H5Pcreate(H5P_OBJECT_COPY)) < 0) TEST_ERROR
/* set options for object copy */
if(H5Pset_copy_object(pid, flag) < 0) TEST_ERROR
/* Verify object copy flags */
if(H5Pget_copy_object(pid, &cpy_flags) < 0) TEST_ERROR
if(cpy_flags != flag) TEST_ERROR
/* copy the group from SRC to DST */
if(crt_intermediate_grp) {
/* Create link creation plist to pass in intermediate group creation */
if((lcpl_id = H5Pcreate(H5P_LINK_CREATE)) < 0) TEST_ERROR
if(H5Pset_create_intermediate_group(lcpl_id, TRUE) < 0) TEST_ERROR
if(H5Ocopy(fid_src, NAME_GROUP_TOP, fid_dst, "/new_g0/new_g00", pid, lcpl_id) < 0) TEST_ERROR
if(H5Pclose(lcpl_id) < 0) TEST_ERROR
/* open the group for copy */
if((gid = H5Gopen(fid_src, NAME_GROUP_TOP)) < 0) TEST_ERROR
/* open the destination group */
if((gid2 = H5Gopen(fid_dst, "/new_g0/new_g00")) < 0) TEST_ERROR
} else if((flag & H5O_COPY_EXPAND_SOFT_LINK_FLAG) > 0) {
if(H5Ocopy(fid_src, NAME_GROUP_LINK, fid_dst, NAME_GROUP_LINK, pid, H5P_DEFAULT) < 0) TEST_ERROR
/* Unlink dataset to copy from original location */
/* (So group comparison works properly) */
if(H5Gunlink(fid_src, NAME_DATASET_SUB_SUB) < 0) TEST_ERROR
/* open the group for copy */
if((gid = H5Gopen(fid_src, NAME_GROUP_LINK2)) < 0) TEST_ERROR
/* open the destination group */
if((gid2 = H5Gopen(fid_dst, NAME_GROUP_LINK)) < 0) TEST_ERROR
} else if(flag & (H5O_COPY_WITHOUT_ATTR_FLAG | H5O_COPY_PRESERVE_NULL_FLAG)) {
if(H5Ocopy(fid_src, NAME_GROUP_TOP, fid_dst, NAME_GROUP_TOP, pid, H5P_DEFAULT) < 0) TEST_ERROR
/* open the group for copy */
if((gid = H5Gopen(fid_src, NAME_GROUP_TOP)) < 0) TEST_ERROR
/* open the destination group */
if((gid2 = H5Gopen(fid_dst, NAME_GROUP_TOP)) < 0) TEST_ERROR
} else if(flag & H5O_COPY_SHALLOW_HIERARCHY_FLAG) {
if(H5Ocopy(fid_src, NAME_GROUP_TOP, fid_dst, NAME_GROUP_TOP, pid, H5P_DEFAULT) < 0) TEST_ERROR
/* open the group for copy */
if((gid = H5Gopen(fid_src, NAME_GROUP_TOP)) < 0) TEST_ERROR
/* open the destination group */
if((gid2 = H5Gopen(fid_dst, NAME_GROUP_TOP)) < 0) TEST_ERROR
/* Set the copy depth */
depth = 1;
} else if((flag & H5O_COPY_EXPAND_REFERENCE_FLAG) > 0) {
if(H5Ocopy(fid_src, NAME_GROUP_REF, fid_dst, NAME_GROUP_REF, pid, H5P_DEFAULT) < 0) TEST_ERROR
/* open the group for copy */
if((gid = H5Gopen(fid_src, NAME_GROUP_REF)) < 0) TEST_ERROR
/* open the destination group */
if((gid2 = H5Gopen(fid_dst, NAME_GROUP_REF)) < 0) TEST_ERROR
} else {
/* Unknown flag */
TEST_ERROR
} /* end else */
/* Check if the groups are equal */
if(compare_groups(gid, gid2, pid, depth, flag) != TRUE) TEST_ERROR
if(H5Gclose(gid2) < 0) TEST_ERROR
if(H5Gclose(gid) < 0) TEST_ERROR
/* close the SRC file */
if(H5Fclose(fid_src) < 0) TEST_ERROR
/* close the DST file */
if(H5Fclose(fid_dst) < 0) TEST_ERROR
/* close properties */
if(H5Pclose(pid) < 0) TEST_ERROR
PASSED();
return 0;
error:
H5E_BEGIN_TRY {
H5Pclose(lcpl_id);
H5Pclose(pid);
H5Sclose(sid);
H5Dclose(did);
H5Gclose(gid_ref);
H5Gclose(gid_sub);
H5Gclose(gid2);
H5Gclose(gid);
H5Fclose(fid_dst);
H5Fclose(fid_src);
} H5E_END_TRY;
return 1;
} /* end test_copy_option */
/*-------------------------------------------------------------------------
* Function: main
*
* Purpose: Test H5Ocopy()
*
* Tests a number of cases: messages can be stored in the
* new or old format, messages can be shared in either,
* both, or neither of the source and destination files.
*
* Return: Non-negative on success/Negative on failure
*
* Programmer: Peter Cao
* Friday, September 30, 2005
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
int
main(void)
{
const char *envval;
/* Don't run this test using the core, split, or multi file drivers */
envval = HDgetenv("HDF5_DRIVER");
if(envval == NULL)
envval = "nomatch";
if(HDstrcmp(envval, "stdio") && HDstrcmp(envval, "core") && HDstrcmp(envval, "split") && HDstrcmp(envval, "multi") && HDstrcmp(envval, "family")) {
int nerrors = 0;
hid_t fapl, fapl2;
hid_t fcpl_shared;
int configuration; /* Configuration of tests. */
int ExpressMode;
/* Setup */
h5_reset();
fapl = h5_fileaccess();
ExpressMode = GetTestExpress();
if (ExpressMode > 1)
printf("***Express test mode on. Some tests may be skipped\n");
/* Copy the file access property list */
if((fapl2 = H5Pcopy(fapl)) < 0) TEST_ERROR
/* Set the "use the latest version of the format" flag for creating objects in the file */
if(H5Pset_latest_format(fapl2, TRUE) < 0) TEST_ERROR
/* Create an FCPL with sharing enabled */
if((fcpl_shared = H5Pcreate(H5P_FILE_CREATE)) < 0) TEST_ERROR
if(H5Pset_shared_mesg_nindexes(fcpl_shared, 1) < 0) TEST_ERROR
if(H5Pset_shared_mesg_index(fcpl_shared, 0, H5O_MESG_ALL_FLAG, (size_t) 10) < 0) TEST_ERROR
/* Test in all configurations */
for(configuration = 0; configuration <= MAX_CONFIGURATION; configuration++) {
hid_t my_fapl;
hid_t fcpl_src;
hid_t fcpl_dst;
/* Test with and without shared messages */
if(configuration & CONFIG_SHARE_SRC) {
puts("\nTesting with shared src messages:");
fcpl_src = fcpl_shared;
}
else {
puts("\nTesting without shared src messages:");
fcpl_src = H5P_DEFAULT;
}
if(configuration & CONFIG_SHARE_DST) {
puts("Testing with shared dst messages:");
fcpl_dst = fcpl_shared;
}
else {
puts("Testing without shared dst messages:");
fcpl_dst = H5P_DEFAULT;
}
/* Set the FAPL for the type of format */
if(configuration & CONFIG_NEW_FORMAT) {
puts("Testing with new group format:");
my_fapl = fapl2;
} /* end if */
else {
puts("Testing with old group format:");
my_fapl = fapl;
} /* end else */
/* The tests... */
nerrors += test_copy_named_datatype(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_named_datatype_vl(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_named_datatype_vl_vl(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_dataset_simple(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_dataset_simple_empty(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_dataset_compound(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_dataset_chunked(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_dataset_chunked_empty(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_dataset_chunked_sparse(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_dataset_compressed(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_dataset_compact(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_dataset_external(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_dataset_named_dtype(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_dataset_named_dtype_hier(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_dataset_named_dtype_hier_outside(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_dataset_multi_ohdr_chunks(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_dataset_attr_named_dtype(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_dataset_contig_vl(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_dataset_chunked_vl(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_dataset_compact_vl(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_dataset_compressed_vl(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_attribute_vl(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_dataset_compact_named_vl(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_dataset_contig_named_vl(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_dataset_chunked_named_vl(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_dataset_compressed_named_vl(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_dataset_compact_vl_vl(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_dataset_contig_vl_vl(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_dataset_chunked_vl_vl(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_dataset_compressed_vl_vl(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_group_empty(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_root_group(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_group(fcpl_src, fcpl_dst, my_fapl);
if (ExpressMode > 1 && !HDstrcmp(envval, "direct")) {
/* This test case with Direct driver has a poor performance on
* NCSA copper, though it works. Skip it for now and worry
* about the performance later.
*/
printf("***Express test mode on. test_copy_group_deep is skipped");
SKIPPED();
} else
nerrors += test_copy_group_deep(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_group_loop(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_group_wide_loop(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_group_links(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_soft_link(fcpl_src, fcpl_dst, my_fapl);
#ifndef H5_CANNOT_OPEN_TWICE
nerrors += test_copy_ext_link(fcpl_src, fcpl_dst, my_fapl);
#endif /* H5_CANNOT_OPEN_TWICE */
nerrors += test_copy_exist(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_path(fcpl_src, fcpl_dst, my_fapl);
nerrors += test_copy_same_file_named_datatype(fcpl_src, my_fapl);
nerrors += test_copy_old_layout(fcpl_dst, my_fapl);
nerrors += test_copy_option(fcpl_src, fcpl_dst, my_fapl, H5O_COPY_WITHOUT_ATTR_FLAG, FALSE, "H5Ocopy(): without attributes");
nerrors += test_copy_option(fcpl_src, fcpl_dst, my_fapl, 0, TRUE, "H5Ocopy(): with missing groups");
nerrors += test_copy_option(fcpl_src, fcpl_dst, my_fapl, H5O_COPY_EXPAND_SOFT_LINK_FLAG, FALSE, "H5Ocopy(): expand soft link");
nerrors += test_copy_option(fcpl_src, fcpl_dst, my_fapl, H5O_COPY_SHALLOW_HIERARCHY_FLAG, FALSE, "H5Ocopy(): shallow group copy");
nerrors += test_copy_option(fcpl_src, fcpl_dst, my_fapl, H5O_COPY_EXPAND_REFERENCE_FLAG, FALSE, "H5Ocopy(): expand object reference");
nerrors += test_copy_option(fcpl_src, fcpl_dst, my_fapl, H5O_COPY_PRESERVE_NULL_FLAG, FALSE, "H5Ocopy(): preserve NULL messages");
nerrors += test_copy_option(fcpl_src, fcpl_dst, my_fapl, H5O_COPY_WITHOUT_ATTR_FLAG | H5O_COPY_PRESERVE_NULL_FLAG, TRUE, "H5Ocopy(): preserve NULL messages");
/* TODO: not implemented
nerrors += test_copy_option(my_fapl, H5O_COPY_EXPAND_EXT_LINK_FLAG, FALSE, "H5Ocopy: expand external link");
nerrors += test_copy_mount(my_fapl);
*/
} /* end for */
/* Reset file address checking info */
addr_reset();
/* Results */
if(nerrors) {
printf("***** %d OBJECT COPY TEST%s FAILED! *****\n",
nerrors, (1 == nerrors ? "" : "S"));
exit(1);
} /* end if */
puts ("All object copying tests passed.");
h5_cleanup(FILENAME, fapl);
} /* end if */
else
puts("All object copying tests skipped - Incompatible with current Virtual File Driver");
return 0;
error:
return 1;
} /* main */
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