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dc9288a447
Purpose: Remove H5_MPI_SPECIAL_COLLECTIVE_IO_WORKS and H5_MPI_COMPLEX_DERIVED_DATATYPE_WORKS #defines from source. Description: Two advanced parallel functionalities, special collective IO and complex derived datatypes, are not supported by older implementations of mpi, and thus our code limits the use of these features with #ifdefs and has checks in configure to set them (or not). Unfortunately, configure can't actually run a parallel check to see if these features are working (nor not) so it resorts to looking in the config files where they are explicity enabled or disabled based on versions of mpi, sytems being built on, or for no documented reason at all (i.e. just set to on or off as some 'default'). Overriding these settings is easy if need be, provided it is known that it needs to be done to get improved performance, and oftentimes it is not. Most new MPI implementations successfully handle the functionality requested when these #defines are set, and many of the "turn these features off" cases in the config files are for old (> 5 years) versions of MPI and retired systems (such as NCSA's tungsten). Therefore, the decision has been made to remove the support for these old versions of MPI and systems that cannot handle these behaviors. The #ifdefs and supporting setup in the config/ files and configure script has been removed, and the code executed when these options were not set removed from the source. In passing, this commit also cleans up some whitespace issues in both t_mpi.c and H5Dmpio.c. Furthermore, in t_mpi.c, the special collective IO test was not getting regularly run due to it being written to work only with four processes (we regularly test with six, previously with three), and thus it failed when actually run due to an out of bounds data buffer assignment. It has been modified to run at any number of processes greater than four, and the memory problem has been fixed so the test passes. Tested: jam, h5committest, ember
156 lines
5.8 KiB
Bash
156 lines
5.8 KiB
Bash
# -*- shell-script -*-
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#
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# Copyright by The HDF Group.
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# Copyright by the Board of Trustees of the University of Illinois.
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# All rights reserved.
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#
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# This file is part of HDF5. The full HDF5 copyright notice, including
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# terms governing use, modification, and redistribution, is contained in
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# the files COPYING and Copyright.html. COPYING can be found at the root
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# of the source code distribution tree; Copyright.html can be found at the
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# root level of an installed copy of the electronic HDF5 document set and
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# is linked from the top-level documents page. It can also be found at
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# http://hdfgroup.org/HDF5/doc/Copyright.html. If you do not have
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# access to either file, you may request a copy from help@hdfgroup.org.
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# Configuration file for building on the IBM AIX platforms.
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# This file is part of the HDF5 build script. It is processed shortly
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# after configure starts and defines, among other things, flags for
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# the various compile modes.
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# Use AIX supplied C compiler by default, xlc for serial, mpcc_r for parallel.
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# Make sure this is applied to other API compile options such as C++.
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if test "X-" = "X-$CC"; then
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if test "X-$enable_parallel" = "X-yes"; then
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CC=mpcc_r
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CC_BASENAME=mpcc_r
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else
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CC=xlc
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CC_BASENAME=xlc
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fi
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fi
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# Define RUNPARALLEL if parallel mode is enabled or a parallel compiler used.
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# Define RUNSERIAL: Temporary patch for Bug 1678. -q32 binary default to run
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# with smaller memory.
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# Ask for more memory so that "make check" will pass. Not necessary for -q64
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# mode but it does no harm.
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if test "X-$enable_parallel" = "X-yes" -o X-$CC_BASENAME = X-mpcc_r; then
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RUNPARALLEL=${RUNPARALLEL="env LDR_CNTRL=MAXDATA=0x20000000@DSA MP_PROCS=\$\${NPROCS:=6} MP_TASKS_PER_NODE=\$\${NPROCS:=6} poe"}
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RUNSERIAL=${RUNSERIAL="env LDR_CNTRL=MAXDATA=0x20000000@DSA MP_PROCS=1 MP_TASKS_PER_NODE=1 poe"}
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else
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RUNSERIAL=${RUNSERIAL="env LDR_CNTRL=MAXDATA=0x20000000@DSA"}
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fi
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#----------------------------------------------------------------------------
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# Compiler flags. The CPPFLAGS values should not include package debug
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# flags like `-DH5G_DEBUG' since these are added with the
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# `--enable-debug' switch of configure.
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case $CC_BASENAME in
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xlc|xlc-*|xlc_r|xlc_r-*|mpcc_r|mpcc_r-*)
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. $srcdir/config/ibm-flags
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;;
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gcc)
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. $srcdir/config/gnu-flags
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;;
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*)
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H5_CFLAGS="$H5_CFLAGS -ansi"
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DEBUG_CFLAGS="-g"
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DEBUG_CPPFLAGS=
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PROD_CFLAGS="-O"
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PROD_CPPFLAGS=
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PROFILE_CFLAGS="-pg"
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PROFILE_CPPFLAGS=
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;;
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esac
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#----------------------------------------------------------------------------
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# Values for overriding configuration tests when cross compiling.
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# This includes compiling on some machines where the serial front end
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# compiles for a parallel back end.
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# Set this to `yes' or `no' depending on whether the target is big
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# endian or little endian.
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hdf5_cv_printf_ll=${hdf5_cv_printf_ll='ll'}
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ac_cv_c_bigendian=${ac_cv_c_bigendian='yes'}
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ac_cv_header_stdc=${ac_cv_header_stdc='yes'}
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ac_cv_header_sys_ioctl_h=${ac_cv_header_sys_ioctl_h=yes}
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# cache the sizeof of "standard C types" so that configure can run faster.
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ac_cv_sizeof_char=${ac_cv_sizeof_char=1}
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ac_cv_sizeof_short=${ac_cv_sizeof_short=2}
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ac_cv_sizeof_int=${ac_cv_sizeof_int=4}
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ac_cv_sizeof_long_long=${ac_cv_sizeof_long_long=8}
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# Do not cache __int64 since it is not a standard C type and some compilers
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# (e.g., gcc) does not support it.
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ac_cv_sizeof_float=${ac_cv_sizeof_float=4}
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ac_cv_sizeof_double=${ac_cv_sizeof_double=8}
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ac_cv_sizeof_long_double=${ac_cv_sizeof_long_double=8}
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ac_cv_sizeof_int8_t=${ac_cv_sizeof_int8_t=1}
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ac_cv_sizeof_uint8_t=${ac_cv_sizeof_uint8_t=1}
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ac_cv_sizeof_int_least8_t=${ac_cv_sizeof_int_least8_t=1}
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ac_cv_sizeof_uint_least8_t=${ac_cv_sizeof_uint_least8_t=1}
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# Do not cache int_fast8_t since the vendor changes often.
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ac_cv_sizeof_int16_t=${ac_cv_sizeof_int16_t=2}
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ac_cv_sizeof_uint16_t=${ac_cv_sizeof_uint16_t=2}
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ac_cv_sizeof_int_least16_t=${ac_cv_sizeof_int_least16_t=2}
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ac_cv_sizeof_uint_least16_t=${ac_cv_sizeof_uint_least16_t=2}
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# Do not cache int_fast16_t since the vendor changes often.
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ac_cv_sizeof_int32_t=${ac_cv_sizeof_int32_t=4}
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ac_cv_sizeof_uint32_t=${ac_cv_sizeof_uint32_t=4}
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ac_cv_sizeof_int_least32_t=${ac_cv_sizeof_int_least32_t=4}
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ac_cv_sizeof_uint_least32_t=${ac_cv_sizeof_uint_least32_t=4}
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ac_cv_sizeof_int_fast32_t=${ac_cv_sizeof_int_fast32_t=4}
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ac_cv_sizeof_uint_fast32_t=${ac_cv_sizeof_uint_fast32_t=4}
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ac_cv_sizeof_int64_t=${ac_cv_sizeof_int64_t=8}
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ac_cv_sizeof_uint64_t=${ac_cv_sizeof_uint64_t=8}
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ac_cv_sizeof_int_least64_t=${ac_cv_sizeof_int_least64_t=8}
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ac_cv_sizeof_uint_least64_t=${ac_cv_sizeof_uint_least64_t=8}
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ac_cv_sizeof_int_fast64_t=${ac_cv_sizeof_int_fast64_t=8}
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ac_cv_sizeof_uint_fast64_t=${ac_cv_sizeof_uint_fast64_t=8}
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# Don't cache long since it varies between 32 and 64 bits
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#ac_cv_sizeof_long=${ac_cv_sizeof_long=4}
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# The default Fortran 90 compiler
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if test "X-" = "X-$FC"; then
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if test "X-$enable_parallel" = "X-yes"; then
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FC=mpxlf90_r
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else
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FC=xlf90
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fi
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fi
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# While we try to avoid setting FCFLAGS directly for use in compilation, in
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# this case we need the -k flag present for some configure checks. As such,
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# the configure script saves the user's set FCFLAGS before running, and
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# restores them when complete. We must then set up both FCFLAGS and H5_FCFLAGS
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# to ensure the flag is present for both configure as well as for the build.
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if test "X-" = "X-$f9x_flags_set"; then
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F9XSUFFIXFLAG="-qsuffix=f=f90"
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FCFLAGS="$FCFLAGS -O ${F9XSUFFIXFLAG}"
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H5_FCFLAGS="$H5_FCFLAGS -O ${F9XSUFFIXFLAG}"
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FSEARCH_DIRS="-I./ -I../src"
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DEBUG_FCFLAGS="-O"
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PROD_FCFLAGS="-O"
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PROFILE_FCFLAGS="-O"
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f9x_flags_set=yes
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fi
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# The default C++ compiler
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# Use AIX supplied C++ compiler by default.
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CXX=${CXX=xlC}
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# Added -qweaksymbol to suppress linker messages warning of duplicate
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# symbols; these warnings are harmless. - BMR
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H5_CXXFLAGS="$H5_CXXFLAGS -qweaksymbol"
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AM_CXXFLAGS="$AM_CXXFLAGS"
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