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hdf5/tools/lib/h5tools_str.c

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/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by The HDF Group. *
* Copyright by the Board of Trustees of the University of Illinois. *
* All rights reserved. *
* *
* This file is part of HDF5. The full HDF5 copyright notice, including *
* terms governing use, modification, and redistribution, is contained in *
* the files COPYING and Copyright.html. COPYING can be found at the root *
* of the source code distribution tree; Copyright.html can be found at the *
* root level of an installed copy of the electronic HDF5 document set and *
* is linked from the top-level documents page. It can also be found at *
* http://hdfgroup.org/HDF5/doc/Copyright.html. If you do not have *
* access to either file, you may request a copy from help@hdfgroup.org. *
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
/*
* Programmer: Bill Wendling <wendling@ncsa.uiuc.edu>
* Monday, 19. February 2001
*
* Purpose: These are string functions for us to use and abuse.
*/
#include <stdarg.h>
#include <stdio.h>
#include <stdlib.h>
#include <string.h>
#include "H5private.h"
#include "h5tools.h" /*for h5tool_format_t structure */
#include "h5tools_ref.h"
#include "h5tools_str.h" /*function prototypes */
/* Copied from hl/src/H5LDprivate.h */
/* Info about the list of comma-separated compound fields */
typedef struct H5LD_memb_t {
size_t tot_offset;
size_t last_tsize;
hid_t last_tid;
char **names;
} H5LD_memb_t;
/*
* If REPEAT_VERBOSE is defined then character strings will be printed so
* that repeated character sequences like "AAAAAAAAAA" are displayed as
*
* 'A' repeates 9 times
*
* Otherwise the format is more Perl-like
*
* 'A'*10
*
*/
#define REPEAT_VERBOSE
/* Variable length string datatype */
#define STR_INIT_LEN 4096 /*initial length */
static char *h5tools_escape(char *s, size_t size);
static hbool_t h5tools_str_is_zero(const void *_mem, size_t size);
static void h5tools_print_char(h5tools_str_t *str, const h5tool_format_t *info, char ch);
void h5tools_str_indent(h5tools_str_t *str, const h5tool_format_t *info, h5tools_context_t *ctx);
/*-------------------------------------------------------------------------
* Function: h5tools_str_close
*
* Purpose: Closes a string by releasing it's memory and setting the size
* information to zero.
*
* Return: void
*
* Programmer: Robb Matzke
* Monday, April 26, 1999
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
void
h5tools_str_close(h5tools_str_t *str)
{
if (str && str->nalloc) {
HDfree(str->s);
HDmemset(str, 0, sizeof(h5tools_str_t));
}
}
/*-------------------------------------------------------------------------
* Function: h5tools_str_len
*
* Purpose: Returns the length of the string, not counting the null
* terminator.
*
* Return: Success: Length of string
*
* Failure: 0
*
* Programmer: Robb Matzke
* Monday, April 26, 1999
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
H5_ATTR_PURE size_t
h5tools_str_len(h5tools_str_t *str)
{
return str->len;
}
/*-------------------------------------------------------------------------
* Function: h5tools_str_append
*
* Purpose: Formats variable arguments according to printf() format
* string and appends the result to variable length string STR.
*
* Return: Success: Pointer to buffer containing result.
*
* Failure: NULL
*
* Programmer: Robb Matzke
* Monday, April 26, 1999
*
* Modifications:
*
* Major change: need to check results of vsnprintf to
* handle errors, empty format, and overflows.
*
* Programmer: REMcG Matzke
* June 16, 2004
*
*-------------------------------------------------------------------------
*/
char *
h5tools_str_append(h5tools_str_t *str/*in,out*/, const char *fmt, ...)
{
va_list ap;
/* Make sure we have some memory into which to print */
if (!str->s || str->nalloc <= 0)
h5tools_str_reset(str);
if (HDstrlen(fmt) == 0)
/* nothing to print */
return str->s;
/* Format the arguments and append to the value already in `str' */
while (1) {
/* How many bytes available for new value, counting the new NUL */
size_t avail = str->nalloc - str->len;
int nchars = -1;
HDva_start(ap, fmt);
nchars = HDvsnprintf(str->s + str->len, avail, fmt, ap);
HDva_end(ap);
/* Note: HDvsnprintf() behaves differently on Windows as Unix, when
* buffer is smaller than source string. On Unix, this function
* returns length of the source string and copy string upto the
* buffer size with NULL at the end of the buffer. However on
* Windows with the same condition, this function returns -1 and
* doesn't add NULL at the end of the buffer.
* Because of this different return results, the strlen of the new string
* is used to handle when HDvsnprintf() returns -1 on Windows due
* to lack of buffer size, so try one more time after realloc more
* buffer size before return NULL.
*/
if (nchars < 0)
/* failure, such as bad format */
return NULL;
if ((size_t) nchars >= avail || (0 == nchars && (HDstrcmp(fmt, "%s")))) {
/* Truncation return value as documented by C99, or zero return value with either of the
* following conditions, each of which indicates that the proper C99 return value probably
* should have been positive when the format string is
* something other than "%s"
* Alocate at least twice as much space and try again.
*/
size_t newsize = MAX(str->len + (size_t)nchars + 1, 2 * str->nalloc);
HDassert(newsize > str->nalloc); /*overflow*/
str->s = (char*)HDrealloc(str->s, newsize);
HDassert(str->s);
str->nalloc = newsize;
}
else {
/* Success */
str->len += (size_t)nchars;
break;
}
}
return str->s;
}
/*-------------------------------------------------------------------------
* Function: h5tools_str_reset
*
* Purpose: Reset the string to the empty value. If no memory is
* allocated yet then initialize the h5tools_str_t struct.
*
* Return: Success: Ptr to the buffer which contains a null
* character as the first element.
*
* Failure: NULL
*
* Programmer: Robb Matzke
* Monday, April 26, 1999
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
char *
h5tools_str_reset(h5tools_str_t *str/*in,out*/)
{
if (!str->s || str->nalloc <= 0) {
str->nalloc = STR_INIT_LEN;
str->s = (char*)HDmalloc(str->nalloc);
HDassert(str->s);
}
str->s[0] = '\0';
str->len = 0;
return str->s;
}
/*-------------------------------------------------------------------------
* Function: h5tools_str_trunc
*
* Purpose: Truncate a string to be at most SIZE characters.
*
* Return: Success: Pointer to the string
*
* Failure: NULL
*
* Programmer: Robb Matzke
* Monday, April 26, 1999
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
char *
h5tools_str_trunc(h5tools_str_t *str/*in,out*/, size_t size)
{
if (size < str->len) {
str->len = size;
str->s[size] = '\0';
}
return str->s;
}
/*-------------------------------------------------------------------------
* Function: h5tools_str_fmt
*
* Purpose: Reformat a string contents beginning at character START
* according to printf format FMT. FMT should contain no format
* specifiers except possibly the `%s' variety. For example, if
* the input string is `hello' and the format is "<<%s>>" then
* the output value will be "<<hello>>".
*
* Return: Success: A pointer to the resulting string.
*
* Failure: NULL
*
* Programmer: Robb Matzke
* Monday, April 26, 1999
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
char *
h5tools_str_fmt(h5tools_str_t *str/*in,out*/, size_t start, const char *fmt)
{
char _temp[1024], *temp = _temp;
HDassert(str);
HDassert(fmt);
/* If the format string is simply "%s" then don't bother doing anything */
if (!HDstrcmp(fmt, "%s"))
return str->s;
/*
* Save the input value if there is a `%' anywhere in FMT. Otherwise
* don't bother because we don't need a temporary copy.
*/
if (HDstrchr(fmt, '%')) {
size_t n = sizeof(_temp);
if (str->len - start + 1 > n) {
n = str->len - start + 1;
temp = (char*)HDmalloc(n);
HDassert(temp);
}
HDstrncpy(temp, str->s + start, n);
}
/* Reset the output string and append a formatted version */
h5tools_str_trunc(str, start);
h5tools_str_append(str, fmt, temp);
/* Free the temp buffer if we allocated one */
if (temp != _temp)
HDfree(temp);
return str->s;
}
/*-------------------------------------------------------------------------
* Function: h5tools_str_prefix
*
* Purpose: Renders the line prefix value into string STR.
*
* Return: Success: Pointer to the prefix.
*
* Failure: NULL
*
* Programmer: Robb Matzke
* Thursday, July 23, 1998
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
char *
h5tools_str_prefix(h5tools_str_t *str/*in,out*/, const h5tool_format_t *info,
hsize_t elmtno, unsigned ndims, h5tools_context_t *ctx)
{
size_t i = 0;
hsize_t curr_pos = elmtno;
h5tools_str_reset(str);
if (ndims > 0) {
/*
* Calculate the number of elements represented by a unit change in a
* certain index position.
*/
for (i = 0; i < (size_t) ndims; i++) {
ctx->pos[i] = curr_pos / ctx->acc[i];
curr_pos -= ctx->acc[i] * ctx->pos[i];
}
HDassert(curr_pos == 0);
/* Print the index values */
for (i = 0; i < (size_t) ndims; i++) {
if (i)
h5tools_str_append(str, "%s", OPT(info->idx_sep, ","));
h5tools_str_append(str, OPT(info->idx_n_fmt, HSIZE_T_FORMAT),
(hsize_t) ctx->pos[i]);
}
}
else {
/* Scalar */
h5tools_str_append(str, OPT(info->idx_n_fmt, HSIZE_T_FORMAT), (hsize_t) 0);
}
/* Add prefix and suffix to the index */
return h5tools_str_fmt(str, (size_t)0, OPT(info->idx_fmt, "%s: "));
}
/*-------------------------------------------------------------------------
* Function: h5tools_str_region_prefix
*
* Purpose: Renders the line prefix value into string STR. Region reference specific.
*
* Return: Success: Pointer to the prefix.
* Failure: NULL
*
* In/Out:
* h5tools_context_t *ctx
* h5tools_str_t *str
*-------------------------------------------------------------------------
*/
char *
h5tools_str_region_prefix(h5tools_str_t *str, const h5tool_format_t *info,
hsize_t elmtno, hsize_t *ptdata, unsigned ndims, hsize_t max_idx[],
h5tools_context_t *ctx)
{
hsize_t p_prod[H5S_MAX_RANK];
size_t i = 0;
hsize_t curr_pos = elmtno;
h5tools_str_reset(str);
if (ndims > 0) {
/*
* Calculate the number of elements represented by a unit change in a
* certain index position.
*/
for (i = ndims - 1, p_prod[ndims - 1] = 1; i > 0; --i)
p_prod[i - 1] = (max_idx[i]) * p_prod[i];
for (i = 0; i < (size_t) ndims; i++) {
if(curr_pos > 0) {
ctx->pos[i] = curr_pos / p_prod[i];
curr_pos -= p_prod[i] * ctx->pos[i];
}
else
ctx->pos[i] = 0;
ctx->pos[i] += (unsigned long) ptdata[ctx->sm_pos+i];
}
/* Print the index values */
for (i = 0; i < (size_t) ndims; i++) {
if (i)
h5tools_str_append(str, "%s", OPT(info->idx_sep, ","));
h5tools_str_append(str, OPT(info->idx_n_fmt, HSIZE_T_FORMAT), (hsize_t) ctx->pos[i]);
}
} /* if (ndims > 0) */
else {
/* Scalar */
h5tools_str_append(str, OPT(info->idx_n_fmt, HSIZE_T_FORMAT), (hsize_t) 0);
}
/* Add prefix and suffix to the index */
return h5tools_str_fmt(str, (size_t)0, OPT(info->idx_fmt, "%s: "));
}
/*-------------------------------------------------------------------------
* Function: h5tools_str_dump_space_slabs
*
* Purpose: Prints information about a dataspace selection by appending
* the information to the specified string.
*
* Return: none
*
* In/Out:
* h5tools_context_t *ctx
* h5tools_str_t *str
*-------------------------------------------------------------------------
*/
void
h5tools_str_dump_space_slabs(h5tools_str_t *str, hid_t rspace,
const h5tool_format_t *info, h5tools_context_t *ctx)
{
hsize_t start[H5S_MAX_RANK];
hsize_t stride[H5S_MAX_RANK];
hsize_t count[H5S_MAX_RANK];
hsize_t block[H5S_MAX_RANK];
int j;
int ndims = H5Sget_simple_extent_ndims(rspace);
H5Sget_regular_hyperslab(rspace, start, stride, count, block);
/* Print hyperslab information */
/* Start coordinates */
h5tools_str_append(str, "%s%s ", info->line_indent, START);
for (j = 0; j < ndims; j++)
h5tools_str_append(str, "%s" HSIZE_T_FORMAT, j ? "," : "(", start[j]);
h5tools_str_append(str, ")");
h5tools_str_append(str, "%s", "\n");
h5tools_str_indent(str, info, ctx);
/* Stride coordinates */
h5tools_str_append(str, "%s ", STRIDE);
for (j = 0; j < ndims; j++)
h5tools_str_append(str, "%s" HSIZE_T_FORMAT, j ? "," : "(", stride[j]);
h5tools_str_append(str, ")");
h5tools_str_append(str, "%s", "\n");
h5tools_str_indent(str, info, ctx);
/* Count coordinates */
h5tools_str_append(str, "%s ", COUNT);
for (j = 0; j < ndims; j++) {
if(count[j] == H5S_UNLIMITED)
h5tools_str_append(str, "%s%s", j ? "," : "(","H5S_UNLIMITED");
else
h5tools_str_append(str, "%s" HSIZE_T_FORMAT, j ? "," : "(", count[j]);
}
h5tools_str_append(str, ")");
h5tools_str_append(str, "%s", "\n");
h5tools_str_indent(str, info, ctx);
/* Block coordinates */
h5tools_str_append(str, "%s ", BLOCK);
for (j = 0; j < ndims; j++) {
if(block[j] == H5S_UNLIMITED)
h5tools_str_append(str, "%s%s", j ? "," : "(","H5S_UNLIMITED");
else
h5tools_str_append(str, "%s" HSIZE_T_FORMAT, j ? "," : "(", block[j]);
}
h5tools_str_append(str, ")");
}
/*-------------------------------------------------------------------------
* Function: h5tools_str_dump_space_blocks
*
* Purpose: Prints information about a dataspace selection by appending
* the information to the specified string.
*
* Return: none
*
* In/Out:
* h5tools_str_t *str
*-------------------------------------------------------------------------
*/
void
h5tools_str_dump_space_blocks(h5tools_str_t *str, hid_t rspace,
const h5tool_format_t *info)
{
hssize_t snblocks;
/*
* This function fails if the rspace does not have blocks.
*/
H5E_BEGIN_TRY {
snblocks = H5Sget_select_hyper_nblocks(rspace);
} H5E_END_TRY;
/* Print block information */
if (snblocks > 0) {
hsize_t nblocks;
hsize_t *ptdata;
hsize_t alloc_size;
unsigned ndims = (unsigned)H5Sget_simple_extent_ndims(rspace);
hsize_t u;
nblocks = (hsize_t)snblocks;
alloc_size = nblocks * ndims * 2 * sizeof(ptdata[0]);
HDassert(alloc_size == (hsize_t) ((size_t) alloc_size)); /*check for overflow*/
ptdata = (hsize_t *)HDmalloc((size_t) alloc_size);
H5Sget_select_hyper_blocklist(rspace, (hsize_t)0, nblocks, ptdata);
for (u = 0; u < nblocks; u++) {
unsigned v;
h5tools_str_append(str, info->dset_blockformat_pre, u ? "," OPTIONAL_LINE_BREAK " " : "", (unsigned long)u);
/* Start coordinates and opposite corner */
for (v = 0; v < ndims; v++)
h5tools_str_append(str, "%s" HSIZE_T_FORMAT, v ? "," : "(",
ptdata[u * 2 * ndims + v]);
for (v = 0; v < ndims; v++)
h5tools_str_append(str, "%s" HSIZE_T_FORMAT, v ? "," : ")-(",
ptdata[u * 2 * ndims + v + ndims]);
h5tools_str_append(str, ")");
}
HDfree(ptdata);
} /* end if (nblocks > 0) */
}
/*-------------------------------------------------------------------------
* Function: h5tools_str_dump_space_points
*
* Purpose: Prints information about a dataspace selection by appending
* the information to the specified string.
*
* Return: none
*
* In/Out:
* h5tools_str_t *str
*-------------------------------------------------------------------------
*/
void
h5tools_str_dump_space_points(h5tools_str_t *str, hid_t rspace,
const h5tool_format_t *info)
{
hssize_t snpoints;
/*
* This function fails if the rspace does not have points.
*/
H5E_BEGIN_TRY {
snpoints = H5Sget_select_elem_npoints(rspace);
} H5E_END_TRY;
/* Print point information */
if (snpoints > 0) {
hsize_t npoints;
hsize_t alloc_size;
hsize_t *ptdata;
unsigned ndims = (unsigned)H5Sget_simple_extent_ndims(rspace);
hsize_t u;
npoints = (hsize_t)snpoints;
alloc_size = npoints * ndims * sizeof(ptdata[0]);
HDassert(alloc_size == (hsize_t) ((size_t) alloc_size)); /*check for overflow*/
ptdata = (hsize_t *)HDmalloc((size_t) alloc_size);
H5Sget_select_elem_pointlist(rspace, (hsize_t)0, npoints, ptdata);
for (u = 0; u < npoints; u++) {
unsigned v;
h5tools_str_append(str, info->dset_ptformat_pre, u ? "," OPTIONAL_LINE_BREAK " " : "",
(unsigned long)u);
for (v = 0; v < ndims; v++)
h5tools_str_append(str, "%s" HSIZE_T_FORMAT, v ? "," : "(",
(ptdata[u * ndims + v]));
h5tools_str_append(str, ")");
}
HDfree(ptdata);
} /* end if (npoints > 0) */
}
/*-------------------------------------------------------------------------
* Function: h5tools_print_char
*
* Purpose: Shove a character into the STR.
*
* Return: Nothing
*
*-------------------------------------------------------------------------
*/
static void
h5tools_print_char(h5tools_str_t *str, const h5tool_format_t *info, char ch)
{
if (info->str_locale == ESCAPE_HTML) {
if (ch <= ' ' || ch > '~')
h5tools_str_append(str, "%%%02x", ch);
else
h5tools_str_append(str, "%c", ch);
}
else {
switch (ch) {
case '"':
if (!info->do_escape)
h5tools_str_append(str, "\"");
else
h5tools_str_append(str, "\\\"");
break;
case '\\':
if (!info->do_escape)
h5tools_str_append(str, "\\");
else
h5tools_str_append(str, "\\\\");
break;
case '\b':
if (!info->do_escape)
h5tools_str_append(str, "\b");
else
h5tools_str_append(str, "\\b");
break;
case '\f':
if (!info->do_escape)
h5tools_str_append(str, "\f");
else
h5tools_str_append(str, "\\f");
break;
case '\n':
if (!info->do_escape) {
h5tools_str_append(str, "\n");
h5tools_str_append(str, " ");
}
else
h5tools_str_append(str, "\\n");
break;
case '\r':
if (!info->do_escape) {
h5tools_str_append(str, "\r");
h5tools_str_append(str, " ");
}
else
h5tools_str_append(str, "\\r");
break;
case '\t':
if (!info->do_escape)
h5tools_str_append(str, "\t");
else
h5tools_str_append(str, "\\t");
break;
default:
if (isprint(ch))
h5tools_str_append(str, "%c", ch);
else
h5tools_str_append(str, "\\%03o", ch);
break;
}
}
}
void
h5tools_str_indent(h5tools_str_t *str, const h5tool_format_t *info,
h5tools_context_t *ctx)
{
unsigned u, indentlevel = 0;
/* Write new prefix */
if (ctx->indent_level > 0)
indentlevel = ctx->indent_level;
else
/*
* This is because sometimes we don't print out all the header
* info for the data (like the tattr-2.ddl example). If that happens
* the ctx->indent_level is negative so we need to skip the above and
* just print out the default indent levels.
*/
indentlevel = ctx->default_indent_level;
for (u = 0; u < indentlevel; u++)
h5tools_str_append(str, "%s", OPT(info->line_indent, ""));
}
/*-------------------------------------------------------------------------
* Function: h5tools_str_sprint
*
* Purpose: Renders the value pointed to by VP of type TYPE into variable
* length string STR.
*
* Return: A pointer to memory containing the result or NULL on error.
*
* Programmer: Robb Matzke
* Thursday, July 23, 1998
*
* Modifications:
* Robb Matzke, 1999-04-26
* Made this function safe from overflow problems by allowing it
* to reallocate the output string.
*
* Robb Matzke, 1999-06-04
* Added support for object references. The new `container'
* argument is the dataset where the reference came from.
*
* Robb Matzke, 1999-06-07
* Added support for printing raw data. If info->raw is non-zero
* then data is printed in hexadecimal format.
*
* Robb Matzke, 2003-01-10
* Binary output format is dd:dd:... instead of 0xdddd... so it
* doesn't look like a hexadecimal integer, and thus users will
* be less likely to complain that HDF5 didn't properly byte
* swap their data during type conversion.
*
* Robb Matzke, LLNL, 2003-06-05
* If TYPE is a variable length string then the pointer to
* the value to pring (VP) is a pointer to a `char*'.
*
* PVN, 28 March 2006
* added H5T_NATIVE_LDOUBLE case
*
* Vailin Choi; August 2010
* Modified to handle printing of selected compound fields for h5watch.
*
* Raymond Lu, 2011-09-01
* CLANG compiler complained about the line (about 800):
* tempint = (tempint >> packed_data_offset) & packed_data_mask;
* The right shift may cause undefined behavior if PACKED_DATA_OFFSET is
* 32-bit or more. For every kind of native integers, I changed the code
* to make it zero if PACKED_DATA_OFFSET is greater than or equal to the
* size of integer.
*
*-------------------------------------------------------------------------
*/
char *
h5tools_str_sprint(h5tools_str_t *str, const h5tool_format_t *info, hid_t container,
hid_t type, void *vp, h5tools_context_t *ctx)
{
size_t nsize, offset, size=0, nelmts, start;
H5T_sign_t nsign;
char *name;
unsigned char *ucp_vp = (unsigned char *)vp;
char *cp_vp = (char *)vp;
hid_t memb, obj;
static char fmt_llong[8], fmt_ullong[8];
H5T_str_t pad;
H5T_class_t type_class;
/* Build default formats for long long types */
if (!fmt_llong[0]) {
HDsnprintf(fmt_llong, sizeof(fmt_llong), "%%%sd", H5_PRINTF_LL_WIDTH);
HDsnprintf(fmt_ullong, sizeof(fmt_ullong), "%%%su", H5_PRINTF_LL_WIDTH);
}
/* Append value depending on data type */
start = h5tools_str_len(str);
nsize = H5Tget_size(type);
nsign = H5Tget_sign(type);
if (info->raw) {
size_t i;
if (1 == nsize) {
h5tools_str_append(str, OPT(info->fmt_raw, "0x%02x"), ucp_vp[0]);
}
else {
for (i = 0; i < nsize; i++) {
if (i)
h5tools_str_append(str, ":");
h5tools_str_append(str, OPT(info->fmt_raw, "%02x"), ucp_vp[i]);
}
}
}
else {
if((type_class = H5Tget_class(type)) < 0)
return NULL;
switch (type_class) {
case H5T_FLOAT:
if (sizeof(float) == nsize) {
/* if (H5Tequal(type, H5T_NATIVE_FLOAT)) */
float tempfloat;
HDmemcpy(&tempfloat, vp, sizeof(float));
h5tools_str_append(str, OPT(info->fmt_float, "%g"), (double)tempfloat);
}
else if (sizeof(double) == nsize) {
/* if (H5Tequal(type, H5T_NATIVE_DOUBLE)) */
double tempdouble;
HDmemcpy(&tempdouble, vp, sizeof(double));
h5tools_str_append(str, OPT(info->fmt_double, "%g"), tempdouble);
#if H5_SIZEOF_LONG_DOUBLE !=0
}
else if (sizeof(long double) == nsize) {
/* if (H5Tequal(type, H5T_NATIVE_LDOUBLE)) */
long double templdouble;
HDmemcpy(&templdouble, vp, sizeof(long double));
h5tools_str_append(str, OPT(info->fmt_double, "%Lf"), templdouble);
#endif
}
break;
case H5T_STRING:
{
unsigned int i;
char quote = '\0';
char *s;
quote = '\0';
if (H5Tis_variable_str(type)) {
/* cp_vp is the pointer into the struct where a `char*' is stored. So we have
* to dereference the pointer to get the `char*' to pass to HDstrlen(). */
s = *(char**) cp_vp;
if (s != NULL) size = HDstrlen(s);
}
else {
s = cp_vp;
size = H5Tget_size(type);
}
pad = H5Tget_strpad(type);
/* Check for NULL pointer for string */
if (s == NULL)
h5tools_str_append(str, "NULL");
else {
for (i = 0; i < size && (s[i] || pad != H5T_STR_NULLTERM); i++) {
unsigned j = 1;
/*
* Count how many times the next character repeats. If the
* threshold is zero then that means it can repeat any number
* of times.
*/
if (info->str_repeat > 0) while (i + j < size && s[i] == s[i + j])
j++;
/*
* Print the opening quote. If the repeat count is high enough to
* warrant printing the number of repeats instead of enumerating
* the characters, then make sure the character to be repeated is
* in it's own quote.
*/
if (info->str_repeat > 0 && j > info->str_repeat) {
if (quote)
h5tools_str_append(str, "%c", quote);
quote = '\'';
h5tools_str_append(str, "%s%c", i ? " " : "", quote);
}
else if (!quote) {
quote = '"';
h5tools_str_append(str, "%s%c", i ? " " : "", quote);
}
/* Print the character */
h5tools_print_char(str, info, s[i]);
/* Print the repeat count */
if (info->str_repeat && j > info->str_repeat) {
#ifdef REPEAT_VERBOSE
h5tools_str_append(str, "%c repeats %d times", quote, j - 1);
#else
h5tools_str_append(str, "%c*%d", quote, j - 1);
#endif /* REPEAT_VERBOSE */
quote = '\0';
i += j - 1;
}
}
if (quote)
h5tools_str_append(str, "%c", quote);
if (i == 0)
/*empty string*/
h5tools_str_append(str, "\"\"");
} /* end else */
}
break;
case H5T_INTEGER:
if (sizeof(char) == nsize) {
if (info->ascii)
h5tools_print_char(str, info, (char) (*ucp_vp));
else if(H5T_SGN_NONE == nsign) {
unsigned char tempuchar;
HDmemcpy(&tempuchar, ucp_vp, sizeof(unsigned char));
if (packed_bits_num) {
if (packed_data_offset >= 8 * sizeof(unsigned char))
tempuchar = 0;
else
tempuchar = (unsigned char)((unsigned long long)(tempuchar >> packed_data_offset) & packed_data_mask);
}
h5tools_str_append(str, OPT(info->fmt_uchar, "%hhu"), tempuchar);
}
else {
signed char tempchar;
HDmemcpy(&tempchar, cp_vp, sizeof(char));
if (packed_bits_num) {
if (packed_data_offset >= 8 * sizeof(char))
tempchar = 0;
else
tempchar = (signed char)((unsigned long long)(tempchar >> packed_data_offset) & packed_data_mask);
}
h5tools_str_append(str, OPT(info->fmt_schar, "%hhd"), tempchar);
}
} /* end if (sizeof(char) == nsize) */
else if (sizeof(int) == nsize) {
if(H5T_SGN_NONE == nsign) {
unsigned int tempuint;
HDmemcpy(&tempuint, vp, sizeof(unsigned int));
if (packed_bits_num) {
if (packed_data_offset >= 8 * sizeof(unsigned int))
tempuint = 0;
else
tempuint = (unsigned)((tempuint >> packed_data_offset) & packed_data_mask);
}
h5tools_str_append(str, OPT(info->fmt_uint, "%u"), tempuint);
}
else {
int tempint;
HDmemcpy(&tempint, vp, sizeof(int));
if (packed_bits_num) {
if (packed_data_offset >= 8 * sizeof(int))
tempint = 0;
else
tempint = (int)((unsigned long long)(tempint >> packed_data_offset) & packed_data_mask);
}
h5tools_str_append(str, OPT(info->fmt_int, "%d"), tempint);
}
} /* end if (sizeof(int) == nsize) */
else if (sizeof(short) == nsize) {
if(H5T_SGN_NONE == nsign) {
unsigned short tempushort;
HDmemcpy(&tempushort, vp, sizeof(unsigned short));
if (packed_bits_num) {
if (packed_data_offset >= 8 * sizeof(unsigned short))
tempushort = 0;
else
tempushort = (unsigned short)((unsigned long long)(tempushort >> packed_data_offset) & packed_data_mask);
}
h5tools_str_append(str, OPT(info->fmt_ushort, "%hu"), tempushort);
}
else {
short tempshort;
HDmemcpy(&tempshort, vp, sizeof(short));
if (packed_bits_num) {
if (packed_data_offset >= 8 * sizeof(short))
tempshort = 0;
else
tempshort = (short)((unsigned long long)(tempshort >> packed_data_offset) & packed_data_mask);
}
h5tools_str_append(str, OPT(info->fmt_short, "%hd"), tempshort);
}
} /* end if (sizeof(short) == nsize) */
else if (sizeof(long) == nsize) {
if(H5T_SGN_NONE == nsign) {
unsigned long tempulong;
HDmemcpy(&tempulong, vp, sizeof(unsigned long));
if (packed_bits_num) {
if (packed_data_offset >= 8 * sizeof(unsigned long))
tempulong = 0;
else
tempulong = (tempulong >> packed_data_offset) & packed_data_mask;
}
h5tools_str_append(str, OPT(info->fmt_ulong, "%lu"), tempulong);
}
else {
long templong;
HDmemcpy(&templong, vp, sizeof(long));
if (packed_bits_num) {
if (packed_data_offset >= 8 * sizeof(long))
templong = 0;
else
templong = (long)((unsigned long long)(templong >> packed_data_offset) & packed_data_mask);
}
h5tools_str_append(str, OPT(info->fmt_long, "%ld"), templong);
}
} /* end if (sizeof(long) == nsize) */
#if H5_SIZEOF_LONG != H5_SIZEOF_LONG_LONG
else if (sizeof(long long) == nsize) {
if(H5T_SGN_NONE == nsign) {
unsigned long long tempullong;
HDmemcpy(&tempullong, vp, sizeof(unsigned long long));
if (packed_bits_num) {
if (packed_data_offset >= 8 * sizeof(unsigned long long))
tempullong = 0;
else
tempullong = (tempullong >> packed_data_offset) & packed_data_mask;
}
h5tools_str_append(str, OPT(info->fmt_ullong, fmt_ullong), tempullong);
}
else {
long long templlong;
HDmemcpy(&templlong, vp, sizeof(long long));
if (packed_bits_num) {
if (packed_data_offset >= 8 * sizeof(long long))
templlong = 0;
else
templlong = (templlong >> packed_data_offset) & packed_data_mask;
}
h5tools_str_append(str, OPT(info->fmt_llong, fmt_llong), templlong);
}
} /* end if (sizeof(long long) == nsize) */
#endif /* H5_SIZEOF_LONG != H5_SIZEOF_LONG_LONG */
break;
case H5T_COMPOUND:
if(ctx->cmpd_listv) { /* there is <list_of_fields> */
int save_indent_level; /* The indentation level */
size_t curr_field; /* Current field to display */
int i = 0, x = 0; /* Local index variable */
H5LD_memb_t **listv; /* Vector of information for <list_of_fields> */
listv = ctx->cmpd_listv;
ctx->cmpd_listv = NULL;
h5tools_str_append(str, "%s", OPT(info->cmpd_pre, "{"));
/*
* Go through the vector containing info about the comma-separated list of
* compound fields and then members in each field:
* put in "{", "}", ",", member name and value accordingly.
*/
save_indent_level = ctx->indent_level;
for(curr_field = 0; listv[curr_field] != NULL; curr_field++) {
if (curr_field)
h5tools_str_append(str, "%s", OPT(info->cmpd_sep, ", "OPTIONAL_LINE_BREAK));
else
h5tools_str_append(str, "%s", OPT(info->cmpd_end, ""));
if(info->arr_linebreak)
h5tools_str_indent(str, info, ctx);
/* Process members of each field */
for(i = 0; listv[curr_field]->names[i] != NULL; i++) {
h5tools_str_append(str, OPT(info->cmpd_name, ""), listv[curr_field]->names[i]);
if(i) {
ctx->indent_level++;
h5tools_str_append(str, "%s", OPT(info->cmpd_pre, "{"));
}
}
h5tools_str_sprint(str, info, container, listv[curr_field]->last_tid, cp_vp + listv[curr_field]->tot_offset, ctx);
if(ctx->indent_level > 0)
for(x = ctx->indent_level; x > 0; x--)
h5tools_str_append(str, "%s", OPT(info->cmpd_suf, "}"));
ctx->indent_level = save_indent_level;
}
if(info->arr_linebreak) {
h5tools_str_append(str, "%s", OPT(info->cmpd_end, ""));
h5tools_str_indent(str, info, ctx);
}
h5tools_str_append(str, "%s", OPT(info->cmpd_suf, "}"));
ctx->cmpd_listv = info->cmpd_listv;
} else {
unsigned nmembs;
unsigned j;
nmembs = (unsigned)H5Tget_nmembers(type);
h5tools_str_append(str, "%s", OPT(info->cmpd_pre, "{"));
ctx->indent_level++;
for (j = 0; j < nmembs; j++) {
if (j)
h5tools_str_append(str, "%s", OPT(info->cmpd_sep, ", "OPTIONAL_LINE_BREAK));
else
h5tools_str_append(str, "%s", OPT(info->cmpd_end, ""));
if (info->arr_linebreak)
h5tools_str_indent(str, info, ctx);
/* The name */
name = H5Tget_member_name(type, j);
h5tools_str_append(str, OPT(info->cmpd_name, ""), name);
H5free_memory(name);
/* The value */
offset = H5Tget_member_offset(type, j);
memb = H5Tget_member_type(type, j);
h5tools_str_sprint(str, info, container, memb, cp_vp + offset, ctx);
H5Tclose(memb);
}
ctx->indent_level--;
if (info->arr_linebreak) {
h5tools_str_append(str, "%s", OPT(info->cmpd_end, ""));
h5tools_str_indent(str, info, ctx);
}
h5tools_str_append(str, "%s", OPT(info->cmpd_suf, "}"));
}
break;
case H5T_ENUM:
{
char enum_name[1024];
if (H5Tenum_nameof(type, vp, enum_name, sizeof enum_name) >= 0) {
h5tools_str_append(str, h5tools_escape(enum_name, sizeof(enum_name)));
}
else {
size_t i;
if (1 == nsize) {
h5tools_str_append(str, "0x%02x", ucp_vp[0]);
}
else {
for (i = 0; i < nsize; i++)
h5tools_str_append(str, "%s%02x", i ? ":" : "", ucp_vp[i]);
}
}
}
break;
case H5T_REFERENCE:
if (h5tools_str_is_zero(vp, nsize))
h5tools_str_append(str, "NULL");
else {
if (nsize == H5R_DSET_REG_REF_BUF_SIZE) {
/* if (H5Tequal(type, H5T_STD_REF_DSETREG)) */
h5tools_str_sprint_region(str, info, container, vp);
}
else if (nsize == H5R_OBJ_REF_BUF_SIZE) {
/* if (H5Tequal(type, H5T_STD_REF_OBJ)) */
/*
* Object references -- show the type and OID of the referenced
* object.
*/
H5O_info_t oi;
const char *path;
obj = H5Rdereference2(container, H5P_DEFAULT, H5R_OBJECT, vp);
H5Oget_info(obj, &oi);
/* Print object type and close object */
switch (oi.type) {
case H5O_TYPE_GROUP:
h5tools_str_append(str, H5_TOOLS_GROUP);
break;
case H5O_TYPE_DATASET:
h5tools_str_append(str, H5_TOOLS_DATASET);
break;
case H5O_TYPE_NAMED_DATATYPE:
h5tools_str_append(str, H5_TOOLS_DATATYPE);
break;
case H5O_TYPE_UNKNOWN:
case H5O_TYPE_NTYPES:
default:
h5tools_str_append(str, "%u-", (unsigned) oi.type);
break;
} /* end switch */
H5Oclose(obj);
/* Print OID */
if (info->obj_hidefileno)
h5tools_str_append(str, info->obj_format, oi.addr);
else
h5tools_str_append(str, info->obj_format, oi.fileno, oi.addr);
/* Print name */
path = lookup_ref_path(*(haddr_t *) vp);
if (path) {
h5tools_str_append(str, " ");
h5tools_str_append(str, path);
h5tools_str_append(str, " ");
} /* end if */
} /* end else if (H5Tequal(type, H5T_STD_REF_OBJ)) */
}
break;
case H5T_ARRAY:
{
int k, ndims;
hsize_t i, dims[H5S_MAX_RANK], temp_nelmts;
static int is_next_arry_elmt = 0;
/* Get the array's base datatype for each element */
memb = H5Tget_super(type);
size = H5Tget_size(memb);
ndims = H5Tget_array_ndims(type);
H5Tget_array_dims2(type, dims);
HDassert(ndims >= 1 && ndims <= H5S_MAX_RANK);
/* Calculate the number of array elements */
for (k = 0, nelmts = 1; k < ndims; k++) {
temp_nelmts = nelmts;
temp_nelmts *= dims[k];
HDassert(temp_nelmts == (hsize_t) ((size_t) temp_nelmts));
nelmts = (size_t) temp_nelmts;
}
/* Print the opening bracket */
h5tools_str_append(str, "%s", OPT(info->arr_pre, "["));
ctx->indent_level++;
for (i = 0; i < nelmts; i++) {
if (i)
h5tools_str_append(str, "%s", OPT(info->arr_sep, "," OPTIONAL_LINE_BREAK));
if (info->arr_linebreak && i && i % dims[ndims - 1] == 0) {
h5tools_str_append(str, "%s", "\n");
h5tools_str_indent(str, info, ctx);
} /* end if */
else if (i && info->arr_sep) {
/* if next element begin, add next line with indent */
if (is_next_arry_elmt) {
is_next_arry_elmt = 0;
h5tools_str_append(str, "%s", "\n ");
h5tools_str_indent(str, info, ctx);
}
/* otherwise just add space */
else
h5tools_str_append(str, " ");
} /* end else if */
/* Dump values in an array element */
is_next_arry_elmt = 0; /* dump all values in the array element, so turn it off */
h5tools_str_sprint(str, info, container, memb, cp_vp + i * size, ctx);
} /* end for */
ctx->indent_level--;
/* Print the closing bracket */
h5tools_str_append(str, "%s", OPT(info->arr_suf, "]"));
is_next_arry_elmt = 1; /* set for begining of next array element */
H5Tclose(memb);
}
break;
case H5T_VLEN:
{
unsigned int i;
/* Get the VL sequences's base datatype for each element */
memb = H5Tget_super(type);
size = H5Tget_size(memb);
/* Print the opening bracket */
h5tools_str_append(str, "%s", OPT(info->vlen_pre, "("));
/* Get the number of sequence elements */
nelmts = ((hvl_t *) cp_vp)->len;
for (i = 0; i < nelmts; i++) {
if (i) h5tools_str_append(str, "%s", OPT(info->vlen_sep, "," OPTIONAL_LINE_BREAK));
#ifdef LATER
/* Need to fix so VL data breaks at correct location on end of line -QAK */
if (info->arr_linebreak && h5tools_str_len(str)>=info->line_ncols) {
int x;
h5tools_str_append(str, "%s", "\n");
/* need to indent some more here */
if (ctx->indent_level >= 0)
h5tools_str_append(str, "%s", OPT(info->line_pre, ""));
for (x = 0; x < ctx->indent_level + 1; x++)
h5tools_str_append(str,"%s",OPT(info->line_indent,""));
} /* end if */
#endif /* LATER */
ctx->indent_level++;
/* Dump the array element */
h5tools_str_sprint(str, info, container, memb, ((char *) (((hvl_t *) cp_vp)->p)) + i * size, ctx);
ctx->indent_level--;
} /* end for */
h5tools_str_append(str, "%s", OPT(info->vlen_suf, ")"));
H5Tclose(memb);
}
break;
case H5T_TIME:
case H5T_BITFIELD:
case H5T_OPAQUE:
{
/* All other types get printed as hexadecimal */
size_t i;
if (1 == nsize) {
h5tools_str_append(str, "0x%02x", ucp_vp[0]);
}
else {
for (i = 0; i < nsize; i++)
h5tools_str_append(str, "%s%02x", i ? ":" : "", ucp_vp[i]);
}
}
break;
case H5T_NO_CLASS:
case H5T_NCLASSES:
default:
h5tools_str_append(str, "invalid datatype");
break;
} /* end switch */
}
return h5tools_str_fmt(str, start, OPT(info->elmt_fmt, "%s"));
}
/*-------------------------------------------------------------------------
* Function: h5tools_str_sprint_region
*
* Purpose: Dataset region reference -- show the type and data of the referenced object.
*
* Return: Nothing
*-------------------------------------------------------------------------
*/
void
h5tools_str_sprint_region(h5tools_str_t *str, const h5tool_format_t *info,
hid_t container, void *vp)
{
hid_t obj, region;
char ref_name[1024];
H5S_sel_type region_type;
obj = H5Rdereference2(container, H5P_DEFAULT, H5R_DATASET_REGION, vp);
if (obj >= 0) {
region = H5Rget_region(container, H5R_DATASET_REGION, vp);
if (region >= 0) {
H5Rget_name(obj, H5R_DATASET_REGION, vp, (char*) ref_name, 1024);
h5tools_str_append(str, info->dset_format, ref_name);
h5tools_str_append(str, "{");
region_type = H5Sget_select_type(region);
if(region_type==H5S_SEL_POINTS)
h5tools_str_dump_space_points(str, region, info);
else
h5tools_str_dump_space_blocks(str, region, info);
h5tools_str_append(str, "}");
H5Sclose(region);
} /* end if (region >= 0) */
H5Dclose(obj);
} /* end if (obj >= 0) */
}
/*-------------------------------------------------------------------------
* Function: h5tools_escape
*
* Purpose: Changes all "funny" characters in S into standard C escape
* sequences.
*
* Return: Success: S
*
* Failure: NULL if the buffer would overflow. The
* buffer has as many left-to-right escapes as
* possible before overflow would have happened.
*
* Programmer: Robb Matzke
* Monday, April 26, 1999
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
static char *
h5tools_escape(char *s/*in,out*/, size_t size)
{
register size_t i;
size_t n = HDstrlen(s);
const char *escape;
char octal[8];
for (i = 0; i < n; i++) {
switch (s[i]) {
case '\'':
escape = "\\\'";
break;
case '\"':
escape = "\\\"";
break;
case '\\':
escape = "\\\\";
break;
case '\?':
escape = "\\\?";
break;
case '\a':
escape = "\\a";
break;
case '\b':
escape = "\\b";
break;
case '\f':
escape = "\\f";
break;
case '\n':
escape = "\\n";
break;
case '\r':
escape = "\\r";
break;
case '\t':
escape = "\\t";
break;
case '\v':
escape = "\\v";
break;
default:
if (!isprint(s[i])) {
HDsnprintf(octal, sizeof(octal), "\\%03o", (unsigned char) s[i]);
escape = octal;
}
else {
escape = NULL;
}
break;
}
if (escape) {
size_t esc_size = HDstrlen(escape);
if (n + esc_size + 1 > size)
/*would overflow*/
return NULL;
HDmemmove(s + i + esc_size, s + i + 1, n - i); /*make room*/
HDmemcpy(s + i, escape, esc_size); /*insert*/
n += esc_size - 1; /* adjust total string size */
i += esc_size; /* adjust string position */
}
}
return s;
}
/*-------------------------------------------------------------------------
* Function: h5tools_str_is_zero
*
* Purpose: Determines if memory is initialized to all zero bytes.
*
* Return: TRUE if all bytes are zero; FALSE otherwise
*
* Programmer: Robb Matzke
* Monday, June 7, 1999
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
static hbool_t
h5tools_str_is_zero(const void *_mem, size_t size)
{
const unsigned char *mem = (const unsigned char *) _mem;
while (size-- > 0)
if (mem[size])
return FALSE;
return TRUE;
}
/*-------------------------------------------------------------------------
* Function: h5tools_str_replace
*
* Purpose: replace all occurrences of substring.
*
* Return: char *
*
* Programmer: Peter Cao
* March 8, 2012
*
* Notes:
* Applications need to call free() to free the memoery allocated for
* the return string
*
*-------------------------------------------------------------------------
*/
char *
h5tools_str_replace ( const char *string, const char *substr, const char *replacement )
{
char *tok = NULL;
char *newstr = NULL;
char *head = NULL;
if(substr == NULL || replacement == NULL)
return HDstrdup(string);
newstr = HDstrdup(string);
head = newstr;
while((tok = HDstrstr(head, substr))) {
char *oldstr;
oldstr = newstr;
newstr = (char *)HDmalloc(HDstrlen(oldstr) - HDstrlen(substr) + HDstrlen(replacement) + 1);
if(newstr == NULL) {
HDfree(oldstr);
return NULL;
}
HDmemcpy(newstr, oldstr, (size_t)(tok - oldstr));
HDmemcpy(newstr + (tok - oldstr), replacement, HDstrlen(replacement));
HDmemcpy(newstr + (tok - oldstr) + HDstrlen(replacement), tok + HDstrlen(substr), HDstrlen(oldstr) - HDstrlen(substr) - (size_t)(tok - oldstr));
HDmemset(newstr + HDstrlen (oldstr) - HDstrlen(substr) + HDstrlen(replacement) , 0, 1);
/* move back head right after the last replacement */
head = newstr + (tok - oldstr) + HDstrlen(replacement);
HDfree(oldstr);
}
return newstr;
}
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