mirror of
https://github.com/HDFGroup/hdf5.git
synced 2024-12-21 07:51:46 +08:00
04a3b2a458
Tested: h5committest
1748 lines
54 KiB
C
1748 lines
54 KiB
C
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
|
|
* Copyright by The HDF Group. *
|
|
* Copyright by the Board of Trustees of the University of Illinois. *
|
|
* All rights reserved. *
|
|
* *
|
|
* This file is part of HDF5. The full HDF5 copyright notice, including *
|
|
* terms governing use, modification, and redistribution, is contained in *
|
|
* the files COPYING and Copyright.html. COPYING can be found at the root *
|
|
* of the source code distribution tree; Copyright.html can be found at the *
|
|
* root level of an installed copy of the electronic HDF5 document set and *
|
|
* is linked from the top-level documents page. It can also be found at *
|
|
* http://hdfgroup.org/HDF5/doc/Copyright.html. If you do not have *
|
|
* access to either file, you may request a copy from help@hdfgroup.org. *
|
|
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
|
|
|
|
#include <stdlib.h>
|
|
#include <string.h>
|
|
#include "h5hltest.h"
|
|
#include "H5srcdir.h"
|
|
#include "H5TBpublic.h"
|
|
|
|
#define TEST_FILE_BE "test_table_be.h5"
|
|
#define TEST_FILE_LE "test_table_le.h5"
|
|
#define TEST_FILE_CRAY "test_table_cray.h5"
|
|
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* Table API test
|
|
*
|
|
* Functions tested:
|
|
*
|
|
* H5TBmake_table
|
|
* H5TBread_table
|
|
* H5TBwrite_records
|
|
* H5TBread_records
|
|
* H5TBappend_records
|
|
* H5TBinsert_record
|
|
* H5TBdelete_record
|
|
* H5TBcombine_tables
|
|
* H5TBwrite_fields_name
|
|
* H5TBread_fields_name
|
|
* H5TBwrite_fields_index
|
|
* H5TBinsert_field
|
|
* H5TBdelete_field
|
|
* H5TBget_table_info
|
|
* H5TBget_field_info
|
|
*
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
|
|
#define TITLE "Title"
|
|
#define NFIELDS 5
|
|
#define NRECORDS 8
|
|
#define NRECORDS_ADD 3
|
|
|
|
#define TESTING2(WHAT) {printf("%-70s", "Testing " WHAT); fflush(stdout);}
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* structure used for all tests, a particle with properties
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
typedef struct particle_t
|
|
{
|
|
char name[16];
|
|
long longi;
|
|
float pressure;
|
|
double temperature;
|
|
int lati;
|
|
} particle_t;
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* a subset of particle_t, with latitude and longitude fields
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
typedef struct position_t
|
|
{
|
|
long longi;
|
|
int lati;
|
|
} position_t;
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* a subset of particle_t, with name and pressure fields
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
typedef struct namepressure_t
|
|
{
|
|
char name[16];
|
|
float pressure;
|
|
} namepressure_t;
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* an extended particle, used in the insert field test
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
typedef struct particle2_t
|
|
{
|
|
char name[16];
|
|
long longi;
|
|
float pressure;
|
|
double temperature;
|
|
int lati;
|
|
int new_field;
|
|
} particle2_t;
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* a particle with one field less, used in the delete field test
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
typedef struct particle3_t
|
|
{
|
|
char name[16];
|
|
long longi;
|
|
double temperature;
|
|
int lati;
|
|
} particle3_t;
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* a particle, used in the delete field test differing memory layout
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
|
|
/* Push current alignment rule forcing 4-byte alignment boundary
|
|
* to the internal stack ...
|
|
*/
|
|
#pragma pack(push,4)
|
|
typedef struct particle4_t {
|
|
uint32_t state;
|
|
double posx;
|
|
double posy;
|
|
float atx[3];
|
|
float aty[3];
|
|
float rro[2];
|
|
} particle4_t;
|
|
/*
|
|
* ... and restore original alignment rules from stack
|
|
*/
|
|
#pragma pack(pop)
|
|
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* function to open an HDF5 file and return its file identifier
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
static hid_t h5file_open(const char *fname, unsigned flags)
|
|
{
|
|
|
|
hid_t fid; /* identifier for the file */
|
|
const char *data_file = H5_get_srcdir_filename(fname);
|
|
|
|
/* open */
|
|
if ((fid = H5Fopen(data_file,flags,H5P_DEFAULT))<0)
|
|
{
|
|
HDfprintf(stderr,"Error: Cannot open file <%s>\n",data_file );
|
|
HDexit(1);
|
|
}
|
|
|
|
return fid;
|
|
}
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* function that compares one particle
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
static int cmp_par(hsize_t i, hsize_t j, particle_t *rbuf, particle_t *wbuf )
|
|
{
|
|
if ( ( HDstrcmp( rbuf[i].name, wbuf[j].name ) != 0 ) ||
|
|
rbuf[i].lati != wbuf[j].lati ||
|
|
rbuf[i].longi != wbuf[j].longi ||
|
|
!FLT_ABS_EQUAL(rbuf[i].pressure,wbuf[j].pressure) ||
|
|
!DBL_ABS_EQUAL(rbuf[i].temperature,wbuf[j].temperature) )
|
|
{
|
|
HDfprintf(stderr,"read and write buffers have differences\n");
|
|
HDfprintf(stderr,"%s %ld %f %f %d\n",
|
|
rbuf[i].name,rbuf[i].longi,(double)rbuf[i].pressure,rbuf[i].temperature,rbuf[i].lati);
|
|
HDfprintf(stderr,"%s %ld %f %f %d\n",
|
|
wbuf[j].name,wbuf[j].longi,(double)wbuf[j].pressure,wbuf[j].temperature,wbuf[j].lati);
|
|
return -1;
|
|
}
|
|
return 0;
|
|
}
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* function to compare deleted records
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
static int compare_deleted(hsize_t rrecords, hsize_t dstart, hsize_t drecords,
|
|
particle_t *rbuf, particle_t *wbuf)
|
|
{
|
|
hsize_t i,j;
|
|
for( i=0; i<rrecords; i++)
|
|
{
|
|
if (i<dstart)
|
|
{
|
|
if (cmp_par(i,i,rbuf,wbuf)<0)
|
|
return -1;
|
|
}
|
|
else
|
|
{
|
|
j=i+drecords;
|
|
if (cmp_par(i,j,rbuf,wbuf)<0)
|
|
return -1;
|
|
}
|
|
}
|
|
return 0;
|
|
}
|
|
|
|
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* the test program
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
|
|
static int test_table(hid_t fid, int do_write)
|
|
{
|
|
hid_t fid1;
|
|
hid_t fid2;
|
|
hsize_t chunk_size=10;
|
|
int compress=0;
|
|
int *fill=NULL;
|
|
particle_t fill1[1] = { {"no data",-1, -99.0f, -99.0f, -1} };
|
|
int fill1_new[1] = { -100 };
|
|
hsize_t position;
|
|
char tname[20];
|
|
hsize_t i, j;
|
|
/* write, read, append, delete, insert some records and fields */
|
|
hsize_t FIELDS = NFIELDS;
|
|
hsize_t RECORDS = NRECORDS;
|
|
hsize_t start;
|
|
hsize_t wstart;
|
|
hsize_t rstart;
|
|
hsize_t istart;
|
|
hsize_t dstart;
|
|
hsize_t nrecords;
|
|
hsize_t rrecords;
|
|
hsize_t wrecords;
|
|
hsize_t arecords;
|
|
hsize_t irecords;
|
|
hsize_t drecords;
|
|
hsize_t nfields;
|
|
hsize_t rfields;
|
|
hsize_t start1; /* record to start reading from 1st table */
|
|
hsize_t start2; /* record to start writing in 2nd table */
|
|
/* read, write, insert, append buffers */
|
|
particle_t rbuf[NRECORDS+4];
|
|
particle2_t rbuf2[NRECORDS];
|
|
particle3_t rbuf3[NRECORDS];
|
|
particle_t rbufc[NRECORDS*2];
|
|
particle_t abuf[2]={{"eight",80,8.0f,80.0f,80},{"nine",90,9.0f,90.0f,90}};
|
|
particle_t ibuf[2]={{"zero", 0, 0.0f, 0.0f, 0},{"zero", 0, 0.0f, 0.0f, 0}};
|
|
particle_t wbufd[NRECORDS];
|
|
particle_t wbuf[NRECORDS] = {
|
|
{"zero", 0, 0.0f, 0.0f, 0,},
|
|
{"one", 10, 1.0f, 10.0f, 10},
|
|
{"two", 20, 2.0f, 20.0f, 20},
|
|
{"three",30, 3.0f, 30.0f, 30},
|
|
{"four", 40, 4.0f, 40.0f, 40},
|
|
{"five", 50, 5.0f, 50.0f, 50},
|
|
{"six", 60, 6.0f, 60.0f, 60},
|
|
{"seven",70, 7.0f, 70.0f, 70}
|
|
};
|
|
/* buffers for the field "Pressure" and "New_field" */
|
|
float pressure_in [NRECORDS] = { 0.0f,1.0f,2.0f,3.0f,4.0f,5.0f,6.0f,7.0f };
|
|
float pressure_out [NRECORDS];
|
|
int buf_new[NRECORDS] = { 0,1,2,3,4,5,6,7 };
|
|
/* buffers for the fields "Latitude,Longitude" */
|
|
position_t position_out[NRECORDS_ADD];
|
|
position_t position_in[NRECORDS_ADD] = { {0,0},
|
|
{10,10},
|
|
{20,20}};
|
|
/* buffers for the fields "Name,Pressure" */
|
|
namepressure_t namepre_out[NRECORDS];
|
|
namepressure_t namepre_in[NRECORDS] =
|
|
{ {"zero",0.0f},
|
|
{"one", 1.0f},
|
|
{"two", 2.0f},
|
|
{"three", 3.0f},
|
|
{"four", 4.0f},
|
|
{"five", 5.0f},
|
|
{"six", 6.0f},
|
|
{"seven", 7.0f},
|
|
};
|
|
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* initialize table parameters
|
|
* field offsets and sizes used in the fields functions
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
|
|
size_t field_offset_pos[2]=
|
|
{
|
|
HOFFSET( position_t, longi ),
|
|
HOFFSET( position_t, lati )
|
|
};
|
|
size_t field_offset_namepre[2]=
|
|
{
|
|
HOFFSET( namepressure_t, name ),
|
|
HOFFSET( namepressure_t, pressure )
|
|
};
|
|
size_t field_sizes_pos[2]=
|
|
{
|
|
sizeof(position_in[0].longi),
|
|
sizeof(position_in[0].lati)
|
|
};
|
|
size_t field_sizes_namepre[2]=
|
|
{
|
|
sizeof(namepre_in[0].name),
|
|
sizeof(namepre_in[0].pressure)
|
|
};
|
|
size_t field_sizes_pre[1]=
|
|
{
|
|
sizeof(namepre_in[0].pressure)
|
|
};
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* query table test
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
char **names_out;
|
|
size_t sizes_out[NFIELDS];
|
|
size_t offset_out[NFIELDS];
|
|
size_t size_out;
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* initialize table parameters
|
|
* field indexes (zero based) used in the fields functions
|
|
* "Name 0","Longitude 1","Pressure 2","Temperature 3","Latitude 4"
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
int field_index_pre[1] = { 2 };
|
|
int field_index_pos[2] = { 1,4 };
|
|
int field_index_namepre[2] = { 0,2 };
|
|
int field_index[NFIELDS] = { 0,1,2,3,4 };
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* initialize table parameters
|
|
* size and the offsets of struct members in memory
|
|
* define the inserted field HDF5 type and buffers
|
|
* these are used for the insert field test
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
hid_t field_type_new = H5T_NATIVE_INT;
|
|
size_t dst_size2 = sizeof( particle2_t );
|
|
size_t dst_offset2[NFIELDS+1] = { HOFFSET( particle2_t, name ),
|
|
HOFFSET( particle2_t, longi ),
|
|
HOFFSET( particle2_t, pressure ),
|
|
HOFFSET( particle2_t, temperature ),
|
|
HOFFSET( particle2_t, lati ),
|
|
HOFFSET( particle2_t, new_field )};
|
|
size_t dst_sizes2[NFIELDS+1] = { sizeof( rbuf2[0].name),
|
|
sizeof( rbuf2[0].longi),
|
|
sizeof( rbuf2[0].pressure),
|
|
sizeof( rbuf2[0].temperature),
|
|
sizeof( rbuf2[0].lati),
|
|
sizeof( rbuf2[0].new_field)};
|
|
/*-------------------------------------------------------------------------
|
|
* initialize table parameters
|
|
* size and the offsets of struct members in memory
|
|
* these are used for the delete field test
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
size_t dst_size3 = sizeof( particle3_t );
|
|
size_t dst_offset3[NFIELDS-1] = { HOFFSET( particle3_t, name ),
|
|
HOFFSET( particle3_t, longi ),
|
|
HOFFSET( particle3_t, temperature ),
|
|
HOFFSET( particle3_t, lati )};
|
|
|
|
size_t dst_sizes3[NFIELDS-1] = { sizeof( rbuf3[0].name),
|
|
sizeof( rbuf3[0].longi),
|
|
sizeof( rbuf3[0].temperature),
|
|
sizeof( rbuf3[0].lati)};
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* initialize table parameters
|
|
* size and the offsets of struct members in memory
|
|
* these are used for the delete field test with differing memory layout
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
|
|
/* Calculate the size and the offsets of our struct members in memory */
|
|
size_t tbl_size = sizeof(particle4_t);
|
|
size_t tbl_offset[NFIELDS+1] = { HOFFSET(particle4_t, state),
|
|
HOFFSET(particle4_t, posx),
|
|
HOFFSET(particle4_t, posy),
|
|
HOFFSET(particle4_t, atx),
|
|
HOFFSET(particle4_t, aty),
|
|
HOFFSET(particle4_t, rro)
|
|
};
|
|
|
|
/* Define an array of Particles */
|
|
particle4_t p_data[NRECORDS] = {
|
|
{12112, 1.4f, 2.5f, {1,2,3},{4,5,6}, {99,100}},
|
|
{12113, 1.4f, 2.5f, {1,2,3},{4,5,6}, {99,100}},
|
|
{12114, 1.4f, 2.5f, {1,2,3},{4,5,6}, {99,100}},
|
|
{12115, 1.4f, 2.5f, {1,2,3},{4,5,6}, {99,100}},
|
|
{12116, 1.4f, 2.5f, {1,2,3},{4,5,6}, {99,100}},
|
|
{12117, 1.4f, 2.5f, {1,2,3},{4,5,6}, {99,100}},
|
|
{12118, 1.4f, 2.5f, {1,2,3},{4,5,6}, {99,100}},
|
|
{12119, 1.4f, 2.5f, {1,2,3},{4,5,6}, {99,100}}
|
|
};
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* initialize table parameters
|
|
* 1) size and the offsets of struct members in memory
|
|
* 2) field names
|
|
* 3) define a HDF5 type for the fields
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
|
|
size_t type_size_mem = sizeof( particle_t );
|
|
size_t field_offset[NFIELDS]=
|
|
{
|
|
HOFFSET( particle_t, name ),
|
|
HOFFSET( particle_t, longi ),
|
|
HOFFSET( particle_t, pressure ),
|
|
HOFFSET( particle_t, temperature ),
|
|
HOFFSET( particle_t, lati )
|
|
};
|
|
size_t field_size[NFIELDS] =
|
|
{
|
|
sizeof( rbuf[0].name),
|
|
sizeof( rbuf[0].longi),
|
|
sizeof( rbuf[0].pressure),
|
|
sizeof( rbuf[0].temperature),
|
|
sizeof( rbuf[0].lati)
|
|
};
|
|
|
|
const char *field_names4[NFIELDS+1] =
|
|
{ "F1", "F2", "F3", "F4", "F5", "F6"};
|
|
hid_t field_type4[NFIELDS+1];
|
|
particle4_t fill_data[1] = { {9999999, -9999999, 999999, {999,999,999},{999,999,999}, {999,999}} };
|
|
|
|
hsize_t nfields_out;
|
|
hsize_t nrecords_out;
|
|
hid_t arry3_32f;
|
|
hid_t arry2_32f;
|
|
hsize_t dims;
|
|
|
|
const char *field_names[NFIELDS] =
|
|
{ "Name","Longitude","Pressure","Temperature","Latitude" };
|
|
hid_t field_type[NFIELDS];
|
|
hid_t string_type = H5Tcopy( H5T_C_S1 );
|
|
|
|
H5Tset_size( string_type, 16 );
|
|
field_type[0] = string_type;
|
|
field_type[1] = H5T_NATIVE_LONG;
|
|
field_type[2] = H5T_NATIVE_FLOAT;
|
|
field_type[3] = H5T_NATIVE_DOUBLE;
|
|
field_type[4] = H5T_NATIVE_INT;
|
|
|
|
/*-------------------------------------------------------------------------
|
|
*
|
|
* Functions tested:
|
|
*
|
|
* H5TBmake_table
|
|
* H5TBread_table
|
|
*
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
if (do_write)
|
|
{
|
|
TESTING2("making table");
|
|
|
|
if (H5TBmake_table(TITLE,fid,"table1",FIELDS,RECORDS,type_size_mem,
|
|
field_names,field_offset,field_type,
|
|
chunk_size,fill,compress,wbuf)<0)
|
|
goto out;
|
|
PASSED();
|
|
}
|
|
|
|
TESTING2("reading table");
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* read the table
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
|
|
if (H5TBread_table(fid,"table1",type_size_mem,field_offset,field_size,rbuf)<0)
|
|
goto out;
|
|
|
|
/* compare the extracted table with the original array */
|
|
for( i = 0; i < NRECORDS; i++ )
|
|
{
|
|
if (cmp_par(i,i,rbuf,wbuf)<0)
|
|
goto out;
|
|
}
|
|
|
|
PASSED();
|
|
|
|
|
|
/*-------------------------------------------------------------------------
|
|
*
|
|
* Functions tested:
|
|
*
|
|
* H5TBwrite_records
|
|
*
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
if (do_write)
|
|
{
|
|
TESTING2("writing records");
|
|
|
|
/* create an empty table */
|
|
if (H5TBmake_table(TITLE,fid,"table2",FIELDS,RECORDS,type_size_mem,
|
|
field_names,field_offset,field_type,
|
|
chunk_size,fill,compress,0)<0)
|
|
goto out;
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* write records, start at 0, write 8
|
|
* pos = 0 1 2 3 4 5 6 7
|
|
* data= 0 1 2 3 4 5 6 7
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
wstart=0;
|
|
wrecords=8;
|
|
if (H5TBwrite_records(fid,"table2",wstart,wrecords,type_size_mem,field_offset,
|
|
field_size,wbuf)<0)
|
|
goto out;
|
|
|
|
/* read it back */
|
|
if (H5TBread_table(fid,"table2",type_size_mem,field_offset,field_size,rbuf)<0)
|
|
goto out;
|
|
|
|
/* compare */
|
|
for( i = 0; i < NRECORDS; i++ )
|
|
{
|
|
if (cmp_par(i,i,rbuf,wbuf)<0)
|
|
goto out;
|
|
}
|
|
|
|
PASSED();
|
|
}
|
|
|
|
/*-------------------------------------------------------------------------
|
|
*
|
|
* Functions tested:
|
|
*
|
|
* H5TBread_records
|
|
*
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
|
|
TESTING2("reading records");
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* read records, start at 0, read 8
|
|
* pos = 0 1 2 3 4 5 6 7
|
|
* data= 0 1 2 3 4 5 6 7
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* for the read test we cannot use "table2" because it has been appended
|
|
* we use the original "table1" instead
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
if(do_write)
|
|
HDstrcpy(tname,"table2");
|
|
else
|
|
HDstrcpy(tname,"table1");
|
|
|
|
rstart=0;
|
|
rrecords=8;
|
|
if (H5TBread_records(fid,tname,rstart,rrecords,type_size_mem,field_offset,
|
|
field_size,rbuf)<0)
|
|
goto out;
|
|
|
|
/* compare */
|
|
for( i = rstart; i < rrecords; i++)
|
|
{
|
|
if (cmp_par(i,i,rbuf,wbuf)<0)
|
|
goto out;
|
|
}
|
|
PASSED();
|
|
|
|
/*-------------------------------------------------------------------------
|
|
*
|
|
* Functions tested:
|
|
*
|
|
* H5TBappend_records
|
|
* H5TBread_records
|
|
*
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
if (do_write)
|
|
{
|
|
TESTING2("appending records");
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* append 2 records
|
|
* pos = 0 1 2 3 4 5 6 7 8 9
|
|
* data= 0 1 2 3 4 5 6 7 8 9
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
arecords=2;
|
|
if (H5TBappend_records(fid,"table2",arecords,type_size_mem,field_offset,field_size,abuf)<0)
|
|
return 1;
|
|
|
|
if (H5TBget_table_info(fid,"table2",&rfields,&rrecords)<0)
|
|
return 1;
|
|
|
|
rstart=0; rrecords=NRECORDS+arecords;
|
|
if (H5TBread_records(fid,"table2",rstart,rrecords,type_size_mem,field_offset,
|
|
field_size,rbuf)<0)
|
|
return 1;
|
|
|
|
/* compare */
|
|
wrecords=8;
|
|
for( i = rstart; i< wrecords; i++)
|
|
{
|
|
if (cmp_par(i,i,rbuf,wbuf)<0)
|
|
goto out;
|
|
}
|
|
for( i = wrecords, j = 0; i < rrecords; i++,j++)
|
|
{
|
|
if (cmp_par(i,j,rbuf,abuf)<0)
|
|
goto out;
|
|
}
|
|
PASSED();
|
|
}
|
|
|
|
/*-------------------------------------------------------------------------
|
|
*
|
|
* Functions tested:
|
|
*
|
|
* H5TBinsert_record
|
|
* H5TBread_records
|
|
*
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
if (do_write)
|
|
{
|
|
TESTING2("inserting records");
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* insert 2 records
|
|
* pos = 0 1 2 3 4 5 6 7 8 9 10 11
|
|
* data= 0 0 0 1 2 3 4 5 6 7 8 9
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
istart=1; irecords=2;
|
|
if (H5TBinsert_record(fid,"table2",istart,irecords,type_size_mem,field_offset,field_size,ibuf)<0)
|
|
return 1;
|
|
|
|
if (H5TBget_table_info(fid,"table2",&rfields,&rrecords)<0)
|
|
return 1;
|
|
|
|
if (H5TBread_records(fid,"table2",rstart,rrecords,type_size_mem,field_offset,
|
|
field_size,rbuf)<0)
|
|
return 1;
|
|
|
|
/* compare */
|
|
for( i = 0; i < 12; i++)
|
|
{
|
|
if (i < istart)
|
|
{
|
|
if (cmp_par(i,i,rbuf,wbuf)<0)
|
|
goto out;
|
|
}
|
|
else if (i >= istart && i < istart + irecords)
|
|
{
|
|
j = i - istart;
|
|
if (cmp_par(i,j,rbuf,ibuf)<0)
|
|
goto out;
|
|
}
|
|
else if ( i >= istart + irecords && i < 10 )
|
|
{
|
|
j = i - irecords;
|
|
if (cmp_par(i,j,rbuf,wbuf)<0)
|
|
goto out;
|
|
}
|
|
else
|
|
{
|
|
j = i - 10;
|
|
if (cmp_par(i,j,rbuf,abuf)<0)
|
|
goto out;
|
|
}
|
|
}
|
|
PASSED();
|
|
}
|
|
|
|
/*-------------------------------------------------------------------------
|
|
*
|
|
* Functions tested:
|
|
*
|
|
* H5TBdelete_record
|
|
* H5TBread_records
|
|
*
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
if (do_write)
|
|
{
|
|
TESTING2("deleting records");
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* Create a table
|
|
* pos = 0 1 2 3 4 5 6 7
|
|
* data= 0 1 2 3 4 5 6 7
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
|
|
for( i=0; i<NRECORDS; i++)
|
|
{
|
|
wbufd[i].lati = wbuf[i].lati;
|
|
wbufd[i].longi = wbuf[i].longi;
|
|
wbufd[i].pressure = wbuf[i].pressure;
|
|
wbufd[i].temperature = wbuf[i].temperature;
|
|
HDstrcpy(wbufd[i].name, wbuf[i].name );
|
|
|
|
}
|
|
|
|
|
|
if (H5TBmake_table(TITLE,fid,"table3",FIELDS,RECORDS,type_size_mem,
|
|
field_names,field_offset,field_type,
|
|
chunk_size,fill,compress,wbufd)<0)
|
|
goto out;
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* Delete records, start at 2, delete 3
|
|
* pos = 0 1 2 3 4
|
|
* data= 0 1 5 6 7
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
dstart=2; drecords=3;
|
|
if (H5TBdelete_record(fid,"table3",dstart,drecords)<0)
|
|
goto out;
|
|
|
|
if (H5TBget_table_info(fid,"table3",&rfields,&rrecords)<0)
|
|
goto out;
|
|
|
|
rstart=0;
|
|
if (H5TBread_records(fid,"table3",rstart,rrecords,type_size_mem,field_offset,
|
|
field_size,rbuf)<0)
|
|
goto out;
|
|
|
|
/* compare */
|
|
nrecords=NRECORDS;
|
|
assert(rrecords == nrecords-drecords);
|
|
if (compare_deleted(rrecords,dstart,drecords,rbuf,wbufd)<0)
|
|
goto out;
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* reset compare buffer
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
nrecords=rrecords;
|
|
for( i=0; i<nrecords; i++)
|
|
{
|
|
wbufd[i] = rbuf[i];
|
|
}
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* Delete records, start at 0, delete 2
|
|
* pos = 0 1 2
|
|
* data= 5 6 7
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
dstart=0; drecords=2;
|
|
if (H5TBdelete_record(fid,"table3",dstart,drecords)<0)
|
|
goto out;
|
|
|
|
if (H5TBget_table_info(fid,"table3",&rfields,&rrecords)<0)
|
|
goto out;
|
|
|
|
rstart=0;
|
|
if (H5TBread_records(fid,"table3",rstart,rrecords,type_size_mem,field_offset,
|
|
field_size,rbuf)<0)
|
|
goto out;
|
|
|
|
/* Compare */
|
|
assert(rrecords == nrecords-drecords);
|
|
if (compare_deleted(rrecords,dstart,drecords,rbuf,wbufd)<0)
|
|
goto out;
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* reset compare buffer
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
nrecords=rrecords;
|
|
for( i=0; i<nrecords; i++)
|
|
{
|
|
wbufd[i] = rbuf[i];
|
|
}
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* Delete records, start at 1, delete 1
|
|
* pos = 0 1
|
|
* data= 5 7
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
dstart=1; drecords=1;
|
|
if (H5TBdelete_record(fid,"table3",dstart,drecords)<0)
|
|
goto out;
|
|
|
|
if (H5TBget_table_info(fid,"table3",&rfields,&rrecords)<0)
|
|
goto out;
|
|
|
|
rstart=0;
|
|
if (H5TBread_records(fid,"table3",rstart,rrecords,type_size_mem,field_offset,
|
|
field_size,rbuf)<0)
|
|
goto out;
|
|
|
|
/* Compare */
|
|
assert(rrecords == nrecords-drecords);
|
|
if (compare_deleted(rrecords,dstart,drecords,rbuf,wbufd)<0)
|
|
goto out;
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* reset compare buffer
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
nrecords=rrecords;
|
|
for( i=0; i<nrecords; i++)
|
|
{
|
|
wbufd[i] = rbuf[i];
|
|
}
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* Delete records, start at 0, delete 1
|
|
* pos = 0
|
|
* data= 7
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
dstart=0; drecords=1;
|
|
if (H5TBdelete_record(fid,"table3",dstart,drecords)<0)
|
|
goto out;
|
|
|
|
if (H5TBget_table_info(fid,"table3",&rfields,&rrecords)<0)
|
|
goto out;
|
|
|
|
rstart=0;
|
|
if (H5TBread_records(fid,"table3",rstart,rrecords,type_size_mem,field_offset,
|
|
field_size,rbuf)<0)
|
|
goto out;
|
|
|
|
/* Compare */
|
|
assert(rrecords == nrecords-drecords);
|
|
if (compare_deleted(rrecords,dstart,drecords,rbuf,wbufd)<0)
|
|
goto out;
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* reset compare buffer
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
nrecords=rrecords;
|
|
for( i=0; i<nrecords; i++)
|
|
{
|
|
wbufd[i] = rbuf[i];
|
|
}
|
|
|
|
/* Read complete table */
|
|
if (H5TBread_table(fid,"table3",type_size_mem,field_offset,field_size,rbuf)<0)
|
|
goto out;
|
|
|
|
/* Compare */
|
|
for( i=0; i<rrecords; i++)
|
|
{
|
|
if (cmp_par(i,i,rbuf,wbufd)<0)
|
|
{
|
|
goto out;
|
|
}
|
|
}
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* Delete records, start at 0, delete 1
|
|
* pos = 0
|
|
* data= empty
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
dstart=0; drecords=1;
|
|
if (H5TBdelete_record(fid,"table3",dstart,drecords)<0)
|
|
goto out;
|
|
|
|
if (H5TBget_table_info(fid,"table3",&rfields,&rrecords)<0)
|
|
goto out;
|
|
|
|
if (rrecords)
|
|
goto out;
|
|
|
|
PASSED();
|
|
}
|
|
|
|
/*------------------------------------------------------------------------
|
|
* Functions tested:
|
|
*
|
|
* H5TBdelete_record -- With differing memory layout from machine memory
|
|
* layout. HDFFV-8055
|
|
*
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
if (do_write)
|
|
{
|
|
TESTING2("deleting records (differing memory layout)");
|
|
|
|
dims = 3;
|
|
arry3_32f = H5Tarray_create2(H5T_NATIVE_FLOAT, 1, &dims);
|
|
|
|
dims = 2;
|
|
arry2_32f = H5Tarray_create2(H5T_NATIVE_FLOAT, 1, &dims);
|
|
|
|
/* Initialize the field field_type */
|
|
field_type4[0] = H5T_NATIVE_UINT32;
|
|
field_type4[1] = H5T_NATIVE_DOUBLE;
|
|
field_type4[2] = H5T_NATIVE_DOUBLE;
|
|
field_type4[3] = arry3_32f;
|
|
field_type4[4] = arry3_32f;
|
|
field_type4[5] = arry2_32f;
|
|
|
|
/* Make the table */
|
|
if (H5TBmake_table("Table Title",fid,"table",NFIELDS+1,(hsize_t)NRECORDS,
|
|
tbl_size, field_names4, tbl_offset, field_type4,
|
|
chunk_size, fill_data, compress, p_data)<0)
|
|
goto out;
|
|
/* Delete records */
|
|
start = 3;
|
|
nrecords = 3;
|
|
if (H5TBdelete_record(fid, "table", start, nrecords)<0)
|
|
goto out;;
|
|
/* Get table info */
|
|
if (H5TBget_table_info(fid,"table", &nfields_out, &nrecords_out)<0)
|
|
goto out;
|
|
/* check */
|
|
if( (int)nfields_out != (int)NFIELDS+1)
|
|
goto out;
|
|
|
|
if( (int)nrecords_out != (int)NRECORDS-3)
|
|
goto out;
|
|
|
|
/* close type */
|
|
H5Tclose(arry3_32f);
|
|
H5Tclose(arry2_32f);
|
|
|
|
PASSED();
|
|
}
|
|
|
|
/*-------------------------------------------------------------------------
|
|
*
|
|
* Functions tested:
|
|
*
|
|
* H5TBadd_records_from
|
|
* H5TBread_records
|
|
*
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
|
|
if (do_write)
|
|
{
|
|
TESTING2("adding records");
|
|
|
|
/* create 2 tables */
|
|
if (H5TBmake_table(TITLE,fid,"table4",FIELDS,RECORDS,type_size_mem,
|
|
field_names,field_offset,field_type,
|
|
chunk_size,fill,compress,wbuf)<0)
|
|
goto out;
|
|
if (H5TBmake_table(TITLE,fid,"table5",FIELDS,RECORDS,type_size_mem,
|
|
field_names,field_offset,field_type,
|
|
chunk_size,fill,compress,wbuf)<0)
|
|
goto out;
|
|
|
|
/* add the records from "table4" to "table5" */
|
|
start1 = 3;
|
|
nrecords = 2;
|
|
start2 = 6;
|
|
if ( H5TBadd_records_from(fid,"table4",start1,nrecords,"table5",start2)<0)
|
|
goto out;
|
|
|
|
/* read final table */
|
|
if (H5TBread_table(fid,"table5",type_size_mem,field_offset,field_size,rbuf)<0)
|
|
goto out;
|
|
|
|
/* compare */
|
|
for( i = 0; i < NRECORDS+2; i++ )
|
|
{
|
|
if ( i < start2 )
|
|
{
|
|
if (cmp_par(i,i,rbuf,wbuf)<0)
|
|
goto out;
|
|
}
|
|
else if ( i < start2 + nrecords )
|
|
{
|
|
j = i - start1;
|
|
if (cmp_par(i,j,rbuf,wbuf)<0)
|
|
goto out;
|
|
}
|
|
else
|
|
{
|
|
j = i - nrecords;
|
|
if (cmp_par(i,j,rbuf,wbuf)<0)
|
|
goto out;
|
|
}
|
|
}
|
|
|
|
PASSED();
|
|
}
|
|
|
|
/*-------------------------------------------------------------------------
|
|
*
|
|
* Functions tested:
|
|
*
|
|
* H5TBcombine_tables
|
|
* H5TBread_table
|
|
*
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
|
|
if (do_write)
|
|
{
|
|
TESTING2("combining tables");
|
|
|
|
/* create 2 tables */
|
|
if (H5TBmake_table(TITLE,fid,"table6",FIELDS,RECORDS,type_size_mem,
|
|
field_names,field_offset,field_type,
|
|
chunk_size,fill,compress,wbuf)<0)
|
|
goto out;
|
|
if (H5TBmake_table(TITLE,fid,"table7",FIELDS,RECORDS,type_size_mem,
|
|
field_names,field_offset,field_type,
|
|
chunk_size,fill,compress,wbuf)<0)
|
|
goto out;
|
|
|
|
/* combine the two tables into a third */
|
|
if ( H5TBcombine_tables(fid,"table6",fid,"table7","table8")<0)
|
|
goto out;
|
|
|
|
/* read merged table */
|
|
if (H5TBread_table(fid,"table8",type_size_mem,field_offset,field_size,rbufc)<0)
|
|
goto out;
|
|
|
|
/* compare */
|
|
for( i = 0; i < NRECORDS*2; i++ )
|
|
{
|
|
if ( i < NRECORDS )
|
|
{
|
|
if (cmp_par(i,i,rbufc,wbuf)<0)
|
|
goto out;
|
|
}
|
|
else
|
|
{
|
|
if (cmp_par(i,i-NRECORDS,rbufc,wbuf)<0)
|
|
goto out;
|
|
}
|
|
}
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* multi file test
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
|
|
/* create 2 files using default properties. */
|
|
fid1 = H5Fcreate("combine_tables1.h5",H5F_ACC_TRUNC,H5P_DEFAULT,H5P_DEFAULT);
|
|
fid2 = H5Fcreate("combine_tables2.h5",H5F_ACC_TRUNC,H5P_DEFAULT,H5P_DEFAULT);
|
|
|
|
/* create 2 tables, one in each file */
|
|
if (H5TBmake_table(TITLE,fid1,"table1",FIELDS,RECORDS,type_size_mem,
|
|
field_names,field_offset,field_type,
|
|
chunk_size,fill,compress,wbuf)<0)
|
|
goto out;
|
|
if (H5TBmake_table(TITLE,fid2,"table2",FIELDS,RECORDS,type_size_mem,
|
|
field_names,field_offset,field_type,
|
|
chunk_size,fill,compress,wbuf)<0)
|
|
goto out;
|
|
|
|
/* combine the two tables into a third */
|
|
if ( H5TBcombine_tables(fid1,"table1",fid2,"table2","table3")<0)
|
|
goto out;
|
|
|
|
/* read merged table */
|
|
if (H5TBread_table(fid1,"table3",type_size_mem,field_offset,field_size,rbufc)<0)
|
|
goto out;
|
|
|
|
/* compare */
|
|
for( i = 0; i < NRECORDS*2; i++ )
|
|
{
|
|
if ( i < NRECORDS )
|
|
{
|
|
if (cmp_par(i,i,rbufc,wbuf)<0)
|
|
goto out;
|
|
}
|
|
else
|
|
{
|
|
if (cmp_par(i,i-NRECORDS,rbufc,wbuf)<0)
|
|
goto out;
|
|
}
|
|
}
|
|
|
|
/* close files */
|
|
H5Fclose(fid1);
|
|
H5Fclose(fid2);
|
|
|
|
PASSED();
|
|
}
|
|
|
|
|
|
/*-------------------------------------------------------------------------
|
|
*
|
|
* Functions tested:
|
|
*
|
|
* H5TBwrite_fields_name
|
|
*
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
if (do_write)
|
|
{
|
|
TESTING2("writing fields by name");
|
|
|
|
/* make an empty table with fill values */
|
|
if (H5TBmake_table(TITLE,fid,"table9",FIELDS,RECORDS,type_size_mem,
|
|
field_names,field_offset,field_type,
|
|
chunk_size,fill1,compress,0)<0)
|
|
goto out;
|
|
|
|
/* write the pressure field starting at record 2 */
|
|
start = 2;
|
|
nrecords = NRECORDS_ADD;
|
|
if (H5TBwrite_fields_name(fid,"table9","Pressure",start,nrecords,sizeof(float),
|
|
0,field_sizes_pre,pressure_in)<0)
|
|
goto out;
|
|
|
|
/* write the new longitude and latitude information starting at record 2 */
|
|
start = 2;
|
|
nrecords = 3;
|
|
if (H5TBwrite_fields_name(fid,"table9","Latitude,Longitude",start,nrecords,sizeof(position_t),
|
|
field_offset_pos,field_sizes_pos,position_in)<0)
|
|
goto out;
|
|
|
|
/* read back the all table */
|
|
start = 0;
|
|
nrecords = NRECORDS;
|
|
if (H5TBread_table(fid,"table9",type_size_mem,field_offset,field_size,rbuf)<0)
|
|
goto out;
|
|
|
|
{
|
|
|
|
|
|
/* compare the read values with the initial values */
|
|
for( i = 0; i < NRECORDS; i++ )
|
|
{
|
|
if ( i >= 2 && i <= 4 )
|
|
{
|
|
if ( rbuf[i].lati != position_in[i-NRECORDS_ADD+1].lati ||
|
|
rbuf[i].longi != position_in[i-NRECORDS_ADD+1].longi ||
|
|
!FLT_ABS_EQUAL(rbuf[i].pressure,pressure_in[i-NRECORDS_ADD+1]) )
|
|
{
|
|
HDfprintf(stderr,"%ld %f %d\n",
|
|
rbuf[i].longi,(double)rbuf[i].pressure,rbuf[i].lati);
|
|
HDfprintf(stderr,"%ld %f %d\n",
|
|
position_in[i].longi,(double)pressure_in[i],position_in[i].lati);
|
|
goto out;
|
|
}
|
|
}
|
|
}
|
|
}
|
|
|
|
|
|
|
|
PASSED();
|
|
} /*write*/
|
|
|
|
/*-------------------------------------------------------------------------
|
|
*
|
|
* Functions tested:
|
|
*
|
|
* H5TBread_fields_name
|
|
*
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
TESTING2("reading fields by name");
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* write and read the "Pressure" field
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
if (do_write)
|
|
{
|
|
if (H5TBmake_table(TITLE,fid,"table10",FIELDS,RECORDS,type_size_mem,
|
|
field_names,field_offset,field_type,
|
|
chunk_size,fill1,compress,0)<0)
|
|
goto out;
|
|
|
|
/* write the pressure field to all the records */
|
|
start = 0;
|
|
nrecords = NRECORDS;
|
|
if ( H5TBwrite_fields_name(fid,"table10","Pressure",start,nrecords,
|
|
sizeof( float ),0,field_sizes_pre,pressure_in)<0)
|
|
goto out;
|
|
}
|
|
|
|
start = 0;
|
|
nrecords = NRECORDS;
|
|
|
|
/* read an invalid field, should fail */
|
|
if ( H5TBread_fields_name(fid,"table10","DoesNotExist",start,nrecords,
|
|
sizeof(float),0,field_sizes_pre,pressure_out) >=0)
|
|
goto out;
|
|
|
|
/* read the "Pressure" field */
|
|
if ( H5TBread_fields_name(fid,"table10","Pressure",start,nrecords,
|
|
sizeof(float),0,field_sizes_pre,pressure_out)<0)
|
|
goto out;
|
|
|
|
/* Compare the extracted table with the initial values */
|
|
for ( i = 0; i < NRECORDS; i++ )
|
|
{
|
|
if ( !FLT_ABS_EQUAL(pressure_out[i], pressure_in[i]) ) {
|
|
goto out;
|
|
}
|
|
}
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* Write and read the "Latitude,Longitude" fields
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
if (do_write)
|
|
{
|
|
/* Write the new longitude and latitude information to all the records */
|
|
start = 0;
|
|
nrecords = NRECORDS_ADD;
|
|
if ( H5TBwrite_fields_name(fid,"table10", "Latitude,Longitude", start, nrecords,
|
|
sizeof( position_t ), field_offset_pos, field_sizes_pos, position_in ) < 0 )
|
|
goto out;
|
|
}/*write*/
|
|
|
|
/* Read the "Latitude,Longitude" fields */
|
|
start = 0;
|
|
nrecords = NRECORDS_ADD;
|
|
if ( H5TBread_fields_name( fid, "table10", "Latitude,Longitude",
|
|
start, nrecords, sizeof(position_t), field_offset_pos, field_sizes_pos, position_out ) < 0 )
|
|
goto out;
|
|
|
|
|
|
/* Compare the extracted table with the initial values */
|
|
for( i = 0; i < NRECORDS_ADD; i++ )
|
|
{
|
|
if ( position_out[i].lati != position_in[i].lati ||
|
|
position_out[i].longi != position_in[i].longi )
|
|
goto out;
|
|
}
|
|
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* Write and read the "Name,Pressure" fields
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
if (do_write)
|
|
{
|
|
/* Write the new name and pressure information to all the records */
|
|
start = 0;
|
|
nrecords = NRECORDS;
|
|
if ( H5TBwrite_fields_name( fid, "table10", "Name,Pressure", start, nrecords,
|
|
sizeof( namepressure_t ), field_offset_namepre, field_sizes_namepre, namepre_in ) < 0 )
|
|
goto out;
|
|
}/*write*/
|
|
|
|
/* Read the "Name,Pressure" fields */
|
|
start = 0;
|
|
nrecords = NRECORDS;
|
|
if ( H5TBread_fields_name( fid, "table10", "Name,Pressure",
|
|
start, nrecords, sizeof(namepressure_t), field_offset_namepre, field_sizes_namepre,
|
|
namepre_out ) < 0 )
|
|
goto out;
|
|
|
|
|
|
/* Compare the extracted table with the initial values */
|
|
for( i = 0; i < NRECORDS; i++ )
|
|
{
|
|
if ( ( HDstrcmp( namepre_out[i].name, namepre_in[i].name ) != 0 ) ||
|
|
!FLT_ABS_EQUAL(namepre_out[i].pressure,namepre_in[i].pressure) ) {
|
|
goto out;
|
|
}
|
|
}
|
|
|
|
/* reset buffer */
|
|
for( i = 0; i < NRECORDS; i++ )
|
|
{
|
|
HDstrcpy( namepre_out[i].name, "\0" );
|
|
namepre_out[i].pressure = -1;
|
|
}
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* read only 3 records of the "Name,Pressure" fields, starting at record 2
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
start = 2;
|
|
nrecords = 3;
|
|
if ( H5TBread_fields_name( fid, "table10", "Name,Pressure",
|
|
start, nrecords, sizeof(namepressure_t), field_offset_namepre,
|
|
field_sizes_namepre, namepre_out ) < 0 )
|
|
goto out;
|
|
|
|
|
|
/* Compare the extracted table with the initial values */
|
|
for( i = 0; i < 3; i++ )
|
|
{
|
|
hsize_t iistart = start;
|
|
if ( ( HDstrcmp( namepre_out[i].name, namepre_in[iistart+i].name ) != 0 ) ||
|
|
!FLT_ABS_EQUAL(namepre_out[i].pressure, namepre_in[iistart+i].pressure) ) {
|
|
goto out;
|
|
}
|
|
}
|
|
|
|
|
|
|
|
PASSED();
|
|
|
|
/*-------------------------------------------------------------------------
|
|
*
|
|
* Functions tested:
|
|
*
|
|
* H5TBwrite_fields_index
|
|
*
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
if (do_write)
|
|
{
|
|
TESTING2("writing fields by index");
|
|
|
|
/* make an empty table */
|
|
if (H5TBmake_table(TITLE,fid,"table11",FIELDS,RECORDS,type_size_mem,
|
|
field_names,field_offset,field_type,
|
|
chunk_size,fill,compress,NULL)<0)
|
|
goto out;
|
|
|
|
/* write the pressure field starting at record 2 */
|
|
nfields = 1;
|
|
start = 2;
|
|
nrecords = NRECORDS_ADD;
|
|
if ( H5TBwrite_fields_index(fid, "table11", nfields, field_index_pre, start, nrecords,
|
|
sizeof( float ), 0, field_sizes_pre, pressure_in ) < 0 )
|
|
goto out;
|
|
|
|
|
|
/* write the new longitude and latitude information starting at record 2 */
|
|
nfields = 2;
|
|
start = 2;
|
|
nrecords = NRECORDS_ADD;
|
|
if ( H5TBwrite_fields_index(fid, "table11", nfields, field_index_pos, start, nrecords,
|
|
sizeof( position_t ), field_offset_pos, field_sizes_pos, position_in ) < 0 )
|
|
goto out;
|
|
|
|
/* read back the all table */
|
|
nfields = 5;
|
|
start = 0;
|
|
nrecords = NRECORDS;
|
|
if ( H5TBread_fields_index(fid, "table11", nfields, field_index,
|
|
start, nrecords, type_size_mem, field_offset, field_size, rbuf ) < 0 )
|
|
goto out;
|
|
|
|
/* Compare the extracted table with the initial values */
|
|
for( i = 0; i < NRECORDS; i++ )
|
|
{
|
|
if ( i >= 2 && i <= 4 )
|
|
{
|
|
if ( rbuf[i].lati != position_in[i-NRECORDS_ADD+1].lati ||
|
|
rbuf[i].longi != position_in[i-NRECORDS_ADD+1].longi ||
|
|
!FLT_ABS_EQUAL(rbuf[i].pressure,pressure_in[i-NRECORDS_ADD+1]) )
|
|
goto out;
|
|
}
|
|
}
|
|
|
|
PASSED();
|
|
}
|
|
|
|
|
|
/*-------------------------------------------------------------------------
|
|
*
|
|
* Functions tested:
|
|
*
|
|
* H5TBread_fields_index
|
|
*
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
|
|
TESTING2("reading fields by index");
|
|
|
|
if (do_write)
|
|
{
|
|
/* make an empty table */
|
|
if (H5TBmake_table(TITLE,fid,"table12",FIELDS,RECORDS,type_size_mem,
|
|
field_names,field_offset,field_type,
|
|
chunk_size,fill,compress,NULL)<0)
|
|
goto out;
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* write and read the "Pressure" field
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
|
|
/* write the pressure field to all the records */
|
|
nfields = 1;
|
|
start = 0;
|
|
nrecords = NRECORDS;
|
|
if ( H5TBwrite_fields_index(fid, "table12", nfields, field_index_pre, start, nrecords,
|
|
sizeof( float ), 0, field_sizes_pre, pressure_in ) < 0 )
|
|
goto out;
|
|
}
|
|
|
|
/* read the "Pressure" field */
|
|
nfields = 1;
|
|
start = 0;
|
|
nrecords = NRECORDS;
|
|
if ( H5TBread_fields_index(fid, "table12", nfields, field_index_pre,
|
|
start, nrecords, sizeof(float), 0, field_sizes_pre, pressure_out ) < 0 )
|
|
goto out;
|
|
|
|
/* compare the extracted table with the initial values */
|
|
for( i = 0; i < NRECORDS; i++ )
|
|
{
|
|
if ( !FLT_ABS_EQUAL(pressure_out[i], pressure_in[i]) ) {
|
|
goto out;
|
|
}
|
|
}
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* write and read the "Latitude,Longitude" fields
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
if (do_write)
|
|
{
|
|
/* write the new longitude and latitude information to all the records */
|
|
nfields = 2;
|
|
start = 0;
|
|
nrecords = NRECORDS;
|
|
if ( H5TBwrite_fields_index(fid, "table12", nfields, field_index_pos, start, nrecords,
|
|
sizeof( position_t ), field_offset_pos, field_sizes_pos, position_in ) < 0 )
|
|
goto out;
|
|
} /*write*/
|
|
|
|
/* read the "Latitude,Longitude" fields */
|
|
nfields = 2;
|
|
start = 0;
|
|
nrecords = NRECORDS_ADD;
|
|
if ( H5TBread_fields_index(fid, "table12", nfields, field_index_pos,
|
|
start, nrecords, sizeof(position_t), field_offset_pos, field_sizes_pos, position_out ) < 0 )
|
|
goto out;
|
|
|
|
/* compare the extracted table with the initial values */
|
|
for( i = 0; i < NRECORDS_ADD; i++ )
|
|
{
|
|
if ( position_out[i].lati != position_in[i].lati ||
|
|
position_out[i].longi != position_in[i].longi ) {
|
|
goto out;
|
|
}
|
|
}
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* write and read the "Name,Pressure" fields
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
|
|
if (do_write)
|
|
{
|
|
/* write the new name and pressure information to all the records */
|
|
nfields = 2;
|
|
start = 0;
|
|
nrecords = NRECORDS;
|
|
if ( H5TBwrite_fields_index(fid, "table12", nfields, field_index_namepre, start, nrecords,
|
|
sizeof( namepressure_t ), field_offset_namepre, field_sizes_namepre, namepre_in ) < 0 )
|
|
goto out;
|
|
}
|
|
|
|
/* read the "Name,Pressure" fields */
|
|
nfields = 2;
|
|
start = 0;
|
|
nrecords = NRECORDS;
|
|
if ( H5TBread_fields_index(fid, "table12", nfields, field_index_namepre,
|
|
start, nrecords, sizeof(namepressure_t), field_offset_namepre,
|
|
field_sizes_namepre, namepre_out ) < 0 )
|
|
goto out;
|
|
|
|
/* compare the extracted table with the initial values */
|
|
for( i = 0; i < NRECORDS; i++ )
|
|
{
|
|
if ( ( HDstrcmp( namepre_out[i].name, namepre_in[i].name ) != 0 ) ||
|
|
!FLT_ABS_EQUAL(namepre_out[i].pressure,namepre_in[i].pressure) ) {
|
|
goto out;
|
|
}
|
|
}
|
|
|
|
/* reset buffer */
|
|
for( i = 0; i < NRECORDS; i++ )
|
|
{
|
|
HDstrcpy( namepre_out[i].name, "\0" );
|
|
namepre_out[i].pressure = -1;
|
|
}
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* read only 3 records of the "Name,Pressure" fields, starting at record 2
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
|
|
/* write the new name and pressure information to all the records */
|
|
nfields = 2;
|
|
start = 2;
|
|
nrecords = 3;
|
|
if ( H5TBread_fields_index(fid, "table12", nfields, field_index_namepre,
|
|
start, nrecords, sizeof(namepressure_t), field_offset_namepre,
|
|
field_sizes_namepre, namepre_out ) < 0 )
|
|
goto out;
|
|
|
|
/* compare the extracted table with the initial values */
|
|
for( i = 0; i < 3; i++ )
|
|
{
|
|
int iistart = (int) start;
|
|
if ( ( HDstrcmp( namepre_out[i].name, wbuf[iistart+(int)i].name ) != 0 ) ||
|
|
!FLT_ABS_EQUAL(namepre_out[i].pressure, wbuf[iistart+(int)i].pressure) ) {
|
|
goto out;
|
|
}
|
|
}
|
|
|
|
PASSED();
|
|
|
|
|
|
/*-------------------------------------------------------------------------
|
|
*
|
|
* Functions tested:
|
|
*
|
|
* H5TBinsert_field
|
|
*
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
|
|
if (do_write)
|
|
{
|
|
TESTING2("inserting fields");
|
|
|
|
/* make a table */
|
|
if (H5TBmake_table(TITLE,fid,"table13",FIELDS,RECORDS,type_size_mem,
|
|
field_names,field_offset,field_type,
|
|
chunk_size,fill1,compress,wbuf)<0)
|
|
goto out;
|
|
|
|
/* insert the new field at the end of the field list */
|
|
position = NFIELDS;
|
|
if ( H5TBinsert_field( fid, "table13", "New Field", field_type_new, position,
|
|
fill1_new, buf_new ) < 0 )
|
|
goto out;
|
|
|
|
/* read the table */
|
|
if ( H5TBread_table( fid, "table13", dst_size2, dst_offset2, dst_sizes2, rbuf2 ) < 0 )
|
|
goto out;
|
|
|
|
/* compare the extracted table with the original array */
|
|
for( i = 0; i < NRECORDS; i++ )
|
|
{
|
|
if ( ( HDstrcmp( rbuf2[i].name, wbuf[i].name ) != 0 ) ||
|
|
rbuf2[i].lati != wbuf[i].lati ||
|
|
rbuf2[i].longi != wbuf[i].longi ||
|
|
!FLT_ABS_EQUAL(rbuf2[i].pressure,wbuf[i].pressure) ||
|
|
!DBL_ABS_EQUAL(rbuf2[i].temperature,wbuf[i].temperature) ||
|
|
rbuf2[i].new_field != buf_new[i] ) {
|
|
goto out;
|
|
}
|
|
}
|
|
PASSED();
|
|
}
|
|
|
|
/*-------------------------------------------------------------------------
|
|
*
|
|
* Functions tested:
|
|
*
|
|
* H5TBdelete_field
|
|
*
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
if (do_write)
|
|
{
|
|
TESTING2("deleting fields");
|
|
|
|
/* make a table */
|
|
if (H5TBmake_table(TITLE,fid,"table14",FIELDS,RECORDS,type_size_mem,
|
|
field_names,field_offset,field_type,
|
|
chunk_size,fill,compress,wbuf)<0)
|
|
goto out;
|
|
|
|
/* delete the field */
|
|
if ( H5TBdelete_field(fid, "table14", "Pressure" ) < 0 )
|
|
goto out;
|
|
|
|
/* read the table */
|
|
if ( H5TBread_table(fid, "table14", dst_size3, dst_offset3, dst_sizes3, rbuf3 ) < 0 )
|
|
goto out;
|
|
|
|
/* compare the extracted table with the original array */
|
|
for( i = 0; i < NRECORDS; i++ )
|
|
{
|
|
if ( ( HDstrcmp( rbuf3[i].name, wbuf[i].name ) != 0 ) ||
|
|
rbuf3[i].lati != wbuf[i].lati ||
|
|
rbuf3[i].longi != wbuf[i].longi ||
|
|
!DBL_ABS_EQUAL(rbuf3[i].temperature,wbuf[i].temperature) ) {
|
|
goto out;
|
|
}
|
|
}
|
|
|
|
PASSED();
|
|
}
|
|
|
|
/*-------------------------------------------------------------------------
|
|
*
|
|
* Functions tested:
|
|
*
|
|
* H5TBget_table_info
|
|
* H5TBget_field_info
|
|
*
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
|
|
TESTING2("getting table info");
|
|
|
|
/* get table info */
|
|
if ( H5TBget_table_info (fid, "table1", &rfields, &rrecords ) < 0 )
|
|
goto out;
|
|
|
|
if ( NFIELDS != rfields || rrecords != NRECORDS ) {
|
|
goto out;
|
|
}
|
|
|
|
PASSED();
|
|
|
|
/*-------------------------------------------------------------------------
|
|
*
|
|
* Functions tested:
|
|
*
|
|
* H5TBget_field_info
|
|
*
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
|
|
TESTING2("getting field info");
|
|
|
|
/* alocate */
|
|
names_out = (char**) HDmalloc( sizeof(char*) * (size_t)NFIELDS );
|
|
for ( i = 0; i < NFIELDS; i++)
|
|
{
|
|
names_out[i] = (char*) HDmalloc( sizeof(char) * 255 );
|
|
}
|
|
|
|
/* Get field info */
|
|
if ( H5TBget_field_info(fid, "table1", names_out, sizes_out, offset_out, &size_out ) < 0 )
|
|
goto out;
|
|
|
|
for ( i = 0; i < NFIELDS; i++)
|
|
{
|
|
if ( (HDstrcmp( field_names[i], names_out[i] ) != 0)) {
|
|
goto out;
|
|
}
|
|
}
|
|
|
|
/* release */
|
|
for ( i = 0; i < NFIELDS; i++)
|
|
{
|
|
HDfree ( names_out[i] );
|
|
}
|
|
HDfree ( names_out );
|
|
|
|
PASSED();
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* end
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
return 0;
|
|
out:
|
|
H5_FAILED();
|
|
return -1;
|
|
}
|
|
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* the main program
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
|
|
int main(void)
|
|
{
|
|
hid_t fid; /* identifier for the file */
|
|
unsigned flags=H5F_ACC_RDONLY;
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* test1: create a file for the write/read test
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
|
|
/* create a file using default properties */
|
|
fid=H5Fcreate("test_table.h5",H5F_ACC_TRUNC,H5P_DEFAULT,H5P_DEFAULT);
|
|
|
|
HDputs("Testing table with file creation mode (read/write in native architecture):");
|
|
|
|
/* test, do write */
|
|
if (test_table(fid,1)<0)
|
|
goto out;
|
|
|
|
/* close */
|
|
H5Fclose(fid);
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* test2: open a file written in test1 on a big-endian machine
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
HDputs("Testing table with file open mode (read big-endian data):");
|
|
|
|
fid=h5file_open(TEST_FILE_BE,flags);
|
|
|
|
/* test, do not write */
|
|
if (test_table(fid,0)<0)
|
|
goto out;
|
|
|
|
/* close */
|
|
H5Fclose(fid);
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* test3: open a file written in test1 on a little-endian machine
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
HDputs("Testing table with file open mode (read little-endian data):");
|
|
|
|
fid=h5file_open(TEST_FILE_LE,flags);
|
|
|
|
/* test, do not write */
|
|
if (test_table(fid,0)<0)
|
|
goto out;
|
|
|
|
/* close */
|
|
H5Fclose(fid);
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* test4: open a file written in test1 on the Cray T3 machine
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
HDputs("Testing table with file open mode (read Cray data):");
|
|
|
|
fid=h5file_open(TEST_FILE_CRAY,flags);
|
|
|
|
/* test, do not write */
|
|
if (test_table(fid,0)<0)
|
|
goto out;
|
|
|
|
/* close */
|
|
H5Fclose(fid);
|
|
|
|
return 0;
|
|
out:
|
|
H5Fclose(fid);
|
|
return 1;
|
|
}
|
|
|
|
|