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* Committing clang-format changes * C++ build and warning updates * Fixes all warnings on C++ (with gcc 9.3) * Updates CMake and Autotools C++ builds * Undo warning clobber Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
1056 lines
39 KiB
C++
1056 lines
39 KiB
C++
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
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* Copyright by The HDF Group. *
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* Copyright by the Board of Trustees of the University of Illinois. *
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* All rights reserved. *
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* *
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* This file is part of HDF5. The full HDF5 copyright notice, including *
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* terms governing use, modification, and redistribution, is contained in *
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* the COPYING file, which can be found at the root of the source code *
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* distribution tree, or in https://www.hdfgroup.org/licenses. *
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* If you do not have access to either file, you may request a copy from *
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* help@hdfgroup.org. *
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* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
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/*****************************************************************************
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FILE
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tfile.cpp - HDF5 C++ testing the file I/O features
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EXTERNAL ROUTINES/VARIABLES:
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These routines are in the test directory of the C library:
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h5_fileaccess() -- in h5test.c, returns a file access template
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***************************************************************************/
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#include <iostream>
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using std::cerr;
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using std::endl;
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#include <string>
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#include "H5Cpp.h" // C++ API header file
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using namespace H5;
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#include "h5test.h"
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#include "h5cpputil.h" // C++ utilility header file
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const hsize_t F1_USERBLOCK_SIZE = 0;
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const size_t F1_OFFSET_SIZE = sizeof(haddr_t);
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const size_t F1_LENGTH_SIZE = sizeof(hsize_t);
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const unsigned F1_SYM_LEAF_K = 4;
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const unsigned F1_SYM_INTERN_K = 16;
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const H5std_string FILE1("tfile1.h5");
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const hsize_t F2_USERBLOCK_SIZE = 512;
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const size_t F2_OFFSET_SIZE = 8;
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const size_t F2_LENGTH_SIZE = 8;
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const unsigned F2_SYM_LEAF_K = 8;
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const unsigned F2_SYM_INTERN_K = 32;
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const unsigned F2_ISTORE = 64;
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const H5std_string FILE2("tfile2.h5");
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const hsize_t F3_USERBLOCK_SIZE = 0;
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const size_t F3_OFFSET_SIZE = F2_OFFSET_SIZE;
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const size_t F3_LENGTH_SIZE = F2_LENGTH_SIZE;
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const unsigned F3_SYM_LEAF_K = F2_SYM_LEAF_K;
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const unsigned F3_SYM_INTERN_K = F2_SYM_INTERN_K;
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const H5std_string FILE3("tfile3.h5");
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const int KB = 1024;
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const H5std_string FILE4("tfile4.h5");
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/*-------------------------------------------------------------------------
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* Function: test_file_create
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*
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* Purpose Test file and template creations
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*
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* Return None
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*
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* Programmer Binh-Minh Ribler (use C version)
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* January, 2001
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*
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* Modifications:
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* January, 2005: C tests' macro VERIFY casts values to 'long' for all
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* cases. Since there are no operator<< for 'long long'
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* or int64 in VS C++ ostream, I casted the hsize_t values
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* passed to verify_val to 'long' as well. If problems
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* arises later, this will have to be specifically handled
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* with a special routine.
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*-------------------------------------------------------------------------
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*/
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static void
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test_file_create()
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{
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// Output message about test being performed
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SUBTEST("File Creation I/O");
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// Test create with various sequences of H5F_ACC_EXCL and
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// H5F_ACC_TRUNC flags
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// Create with H5F_ACC_EXCL
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// First ensure the file does not exist
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remove(FILE1.c_str());
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// Setting this to NULL for cleaning up in failure situations
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H5File *file1 = NULL;
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try {
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// Create file FILE1
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file1 = new H5File(FILE1, H5F_ACC_EXCL);
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// Try to create the same file with H5F_ACC_TRUNC. This should fail
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// because file1 is the same file and is currently open.
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try {
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H5File file2(FILE1, H5F_ACC_TRUNC); // should throw E
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// Should FAIL but didn't, so throw an invalid action exception
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throw InvalidActionException("H5File constructor", "Attempted to create an existing file.");
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}
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catch (FileIException &E) // catch truncating existing file
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{
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} // do nothing, FAIL expected
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// Close file1
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delete file1;
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file1 = NULL;
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// Try again with H5F_ACC_EXCL. This should fail because the file
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// already exists from the previous steps.
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try {
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H5File file2(FILE1, H5F_ACC_EXCL); // should throw E
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// Should FAIL but didn't, so throw an invalid action exception
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throw InvalidActionException("H5File constructor", "File already exists.");
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}
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catch (FileIException &E) // catching creating existing file
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{
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} // do nothing, FAIL expected
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// Test create with H5F_ACC_TRUNC. This will truncate the existing file.
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file1 = new H5File(FILE1, H5F_ACC_TRUNC);
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// Try to create first file again. This should fail because file1
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// is the same file and is currently open.
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try {
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H5File file2(FILE1, H5F_ACC_TRUNC); // should throw E
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// Should FAIL but didn't, so throw an invalid action exception
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throw InvalidActionException("H5File constructor", "H5F_ACC_TRUNC attempt on an opened file.");
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}
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catch (FileIException &E) // catching truncating opened file
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{
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} // do nothing, FAIL expected
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// Try with H5F_ACC_EXCL. This should fail too because the file already
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// exists.
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try {
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H5File file3(FILE1, H5F_ACC_EXCL); // should throw E
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// Should FAIL but didn't, so throw an invalid action exception
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throw InvalidActionException("H5File constructor", "H5F_ACC_EXCL attempt on an existing file.");
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}
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catch (FileIException &E) // catching H5F_ACC_EXCL on existing file
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{
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} // do nothing, FAIL expected
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// Get the file-creation template
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FileCreatPropList tmpl1 = file1->getCreatePlist();
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hsize_t ublock = tmpl1.getUserblock();
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verify_val(static_cast<long>(ublock), static_cast<long>(F1_USERBLOCK_SIZE),
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"FileCreatPropList::getUserblock", __LINE__, __FILE__);
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size_t parm1, parm2; // file-creation parameters
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tmpl1.getSizes(parm1, parm2);
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verify_val(parm1, F1_OFFSET_SIZE, "FileCreatPropList::getSizes", __LINE__, __FILE__);
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verify_val(parm2, F1_LENGTH_SIZE, "FileCreatPropList::getSizes", __LINE__, __FILE__);
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unsigned iparm1, iparm2; // file-creation parameters
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tmpl1.getSymk(iparm1, iparm2);
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verify_val(iparm1, F1_SYM_INTERN_K, "FileCreatPropList::getSymk", __LINE__, __FILE__);
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verify_val(iparm2, F1_SYM_LEAF_K, "FileCreatPropList::getSymk", __LINE__, __FILE__);
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// tmpl1 is automatically closed; if error occurs, it'll be
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// caught in the catch block
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// Close first file
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delete file1;
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}
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catch (InvalidActionException &E) {
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cerr << " *FAILED*" << endl;
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cerr << " <<< " << E.getDetailMsg() << " >>>" << endl << endl;
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// clean up
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delete file1;
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}
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// catch all other exceptions
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catch (Exception &E) {
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issue_fail_msg("test_file_create()", __LINE__, __FILE__, E.getCDetailMsg());
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// clean up
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delete file1;
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}
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// Setting this to NULL for cleaning up in failure situations
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FileCreatPropList *tmpl1 = NULL;
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try {
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// Create a new file with a non-standard file-creation template
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tmpl1 = new FileCreatPropList;
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// Set the new file-creation parameters
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tmpl1->setUserblock(F2_USERBLOCK_SIZE);
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tmpl1->setSizes(F2_OFFSET_SIZE, F2_LENGTH_SIZE);
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tmpl1->setSymk(F2_SYM_INTERN_K, F2_SYM_LEAF_K);
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// Try to create second file, with non-standard file-creation template
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// params.
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H5File file2(FILE2, H5F_ACC_TRUNC, *tmpl1);
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// Release file-creation template
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delete tmpl1;
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tmpl1 = NULL;
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// Get the file-creation template
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tmpl1 = new FileCreatPropList(file2.getCreatePlist());
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// Get the file-creation parameters
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hsize_t ublock = tmpl1->getUserblock();
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verify_val(static_cast<long>(ublock), static_cast<long>(F2_USERBLOCK_SIZE),
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"FileCreatPropList::getUserblock", __LINE__, __FILE__);
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size_t parm1, parm2; // file-creation parameters
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tmpl1->getSizes(parm1, parm2);
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verify_val(parm1, F2_OFFSET_SIZE, "FileCreatPropList::getSizes", __LINE__, __FILE__);
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verify_val(parm2, F2_LENGTH_SIZE, "FileCreatPropList::getSizes", __LINE__, __FILE__);
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unsigned iparm1, iparm2; // file-creation parameters
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tmpl1->getSymk(iparm1, iparm2);
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verify_val(iparm1, F2_SYM_INTERN_K, "FileCreatPropList::getSymk", __LINE__, __FILE__);
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verify_val(iparm2, F2_SYM_LEAF_K, "FileCreatPropList::getSymk", __LINE__, __FILE__);
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// Clone the file-creation template
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FileCreatPropList tmpl2;
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tmpl2.copy(*tmpl1);
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// Release file-creation template
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delete tmpl1;
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tmpl1 = NULL;
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// Set the new file-creation parameter
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tmpl2.setUserblock(F3_USERBLOCK_SIZE);
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// Try to create second file, with non-standard file-creation template
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// params
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H5File file3(FILE3, H5F_ACC_TRUNC, tmpl2);
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// Get the file-creation template
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tmpl1 = new FileCreatPropList(file3.getCreatePlist());
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// Get the file-creation parameters
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ublock = tmpl1->getUserblock();
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verify_val(static_cast<long>(ublock), static_cast<long>(F3_USERBLOCK_SIZE),
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"FileCreatPropList::getUserblock", __LINE__, __FILE__);
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tmpl1->getSizes(parm1, parm2);
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verify_val(parm1, F3_OFFSET_SIZE, "FileCreatPropList::getSizes", __LINE__, __FILE__);
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verify_val(parm2, F3_LENGTH_SIZE, "FileCreatPropList::getSizes", __LINE__, __FILE__);
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tmpl1->getSymk(iparm1, iparm2);
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verify_val(iparm1, F3_SYM_INTERN_K, "FileCreatPropList::getSymk", __LINE__, __FILE__);
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verify_val(iparm2, F3_SYM_LEAF_K, "FileCreatPropList::getSymk", __LINE__, __FILE__);
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// Release file-creation template
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delete tmpl1;
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PASSED();
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}
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// catch all exceptions
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catch (Exception &E) {
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issue_fail_msg("test_file_create()", __LINE__, __FILE__, E.getCDetailMsg());
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// clean up
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delete tmpl1;
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}
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} // test_file_create()
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/*-------------------------------------------------------------------------
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* Function: test_file_open
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*
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* Purpose Test file accesses
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*
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* Return None
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*
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* Programmer Binh-Minh Ribler (use C version)
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* January, 2001
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*
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* Modifications:
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* January, 2005: C tests' macro VERIFY casts values to 'long' for all
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* cases. Since there are no operator<< for 'long long'
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* or int64 in VS C++ ostream, I casted the hsize_t values
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* passed to verify_val to 'long' as well. If problems
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* arises later, this will have to be specifically handled
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* with a special routine.
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*-------------------------------------------------------------------------
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*/
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static void
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test_file_open()
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{
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// Output message about test being performed
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SUBTEST("File Opening I/O");
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try {
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// Open first file
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H5File file1(FILE2, H5F_ACC_RDWR);
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// Get the file-creation template
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FileCreatPropList tmpl1 = file1.getCreatePlist();
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// Get the file-creation parameters
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hsize_t ublock = tmpl1.getUserblock();
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verify_val(static_cast<long>(ublock), static_cast<long>(F2_USERBLOCK_SIZE),
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"FileCreatPropList::getUserblock", __LINE__, __FILE__);
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size_t parm1, parm2; // file-creation parameters
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tmpl1.getSizes(parm1, parm2);
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verify_val(parm1, F2_OFFSET_SIZE, "FileCreatPropList::getSizes", __LINE__, __FILE__);
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verify_val(parm2, F2_LENGTH_SIZE, "FileCreatPropList::getSizes", __LINE__, __FILE__);
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unsigned iparm1, iparm2; // file-creation parameters
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tmpl1.getSymk(iparm1, iparm2);
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verify_val(iparm1, F2_SYM_INTERN_K, "FileCreatPropList::getSymk", __LINE__, __FILE__);
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verify_val(iparm2, F2_SYM_LEAF_K, "FileCreatPropList::getSymk", __LINE__, __FILE__);
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// Test H5File constructor with existing file id
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H5File file2(file1.getId());
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file1.close();
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// Try truncating the file, and it should fail because the file is
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// still opened with file2.
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try {
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H5File file3(FILE2, H5F_ACC_TRUNC); // should throw E
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// Should FAIL but didn't, so throw an invalid action exception
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throw InvalidActionException("H5File constructor", "Attempt truncating an opened file.");
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}
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catch (FileIException &E) // catching H5F_ACC_TRUNC on opened file
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{
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} // do nothing, FAIL expected
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// Now, really close the file.
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file2.close();
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// Truncating should succeed now.
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H5File file3(FILE2, H5F_ACC_TRUNC);
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// Opening another file to file3 object, FILE2 should be closed, so
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// the next attempt to truncate FILE2 should succeed.
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file3.openFile(FILE1, H5F_ACC_RDONLY);
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H5File file4(FILE2, H5F_ACC_TRUNC);
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PASSED();
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} // end of try block
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catch (Exception &E) {
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issue_fail_msg("test_file_open()", __LINE__, __FILE__, E.getCDetailMsg());
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}
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} // test_file_open()
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/*-------------------------------------------------------------------------
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* Function: test_file_size
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*
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* Purpose Test file size.
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*
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* Return None
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*
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* Programmer Raymond Lu
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* June, 2004
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*-------------------------------------------------------------------------
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*/
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static void
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test_file_size()
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{
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// Output message about test being performed
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SUBTEST("File Size");
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hid_t fapl_id;
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fapl_id = h5_fileaccess(); // in h5test.c, returns a file access template
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try {
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// Use the file access template id to create a file access prop.
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// list object to pass in H5File::H5File
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FileAccPropList fapl(fapl_id);
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// Set to sec2 driver. Do we want to test other file drivers?
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// They're not tested in C++.
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// File drivers seem not implemented.
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// fapl.setSec2();
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// Create a file
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H5File file4(FILE4, H5F_ACC_TRUNC, FileCreatPropList::DEFAULT, fapl);
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// Get file size
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hsize_t file_size = file4.getFileSize();
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// Check if file size is reasonable. It's supposed to be 2KB now.
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if (file_size < 1 * KB || file_size > 4 * KB)
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issue_fail_msg("test_file_size()", __LINE__, __FILE__,
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"getFileSize() returned unreasonable value");
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// Get the amount of free space in the file
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hssize_t free_space = file4.getFreeSpace();
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// Check if it's reasonable. It's 0 now.
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if (free_space < 0 || free_space > 4 * KB)
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issue_fail_msg("test_file_size()", __LINE__, __FILE__,
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"getFreeSpace returned unreasonable value");
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PASSED();
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} // end of try block
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catch (Exception &E) {
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issue_fail_msg("test_file_size()", __LINE__, __FILE__, E.getCDetailMsg());
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}
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// use C test utility routine to close property list.
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herr_t ret = H5Pclose(fapl_id);
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if (ret < 0)
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issue_fail_msg("test_file_size()", __LINE__, __FILE__, "H5Pclose failed");
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} // test_file_size()
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/*-------------------------------------------------------------------------
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* Function: test_file_num
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*
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* Purpose Test file number.
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*
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* Return None
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*
|
|
* Programmer Quincey Koziol
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|
* April, 2019
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*-------------------------------------------------------------------------
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*/
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|
static void
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test_file_num()
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{
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// Output message about test being performed
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SUBTEST("File Number");
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hid_t fapl_id;
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fapl_id = h5_fileaccess(); // in h5test.c, returns a file access template
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try {
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// Use the file access template id to create a file access prop.
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|
// list object to pass in H5File::H5File
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FileAccPropList fapl(fapl_id);
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// Create two files
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H5File file1(FILE1, H5F_ACC_TRUNC, FileCreatPropList::DEFAULT, fapl);
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H5File file2(FILE2, H5F_ACC_TRUNC, FileCreatPropList::DEFAULT, fapl);
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// Open the first file again
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H5File file3(FILE1, H5F_ACC_RDWR);
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// Get file numbers
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unsigned long file_num1 = file1.getFileNum();
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unsigned long file_num2 = file2.getFileNum();
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unsigned long file_num3 = file3.getFileNum();
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// Check file numbers
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if (file_num1 == file_num2)
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issue_fail_msg("test_file_num()", __LINE__, __FILE__, "getFileNum() returned wrong value");
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if (file_num1 != file_num3)
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issue_fail_msg("test_file_num()", __LINE__, __FILE__, "getFileNum() returned wrong value");
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PASSED();
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} // end of try block
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catch (Exception &E) {
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issue_fail_msg("test_file_num()", __LINE__, __FILE__, E.getCDetailMsg());
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}
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// use C test utility routine to close property list.
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herr_t ret = H5Pclose(fapl_id);
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if (ret < 0)
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issue_fail_msg("test_file_num()", __LINE__, __FILE__, "H5Pclose failed");
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} // test_file_num()
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|
|
/*-------------------------------------------------------------------------
|
|
* Function: test_file_name
|
|
*
|
|
* Purpose Test getting file's name.
|
|
*
|
|
* Return None
|
|
*
|
|
* Programmer Binh-Minh Ribler
|
|
* July, 2004
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
const int RANK = 2;
|
|
const int NX = 4;
|
|
const int NY = 5;
|
|
const H5std_string GROUPNAME("group");
|
|
const H5std_string DSETNAME("dataset");
|
|
const H5std_string DATTRNAME("dataset attribute");
|
|
const H5std_string FATTRNAME("file attribute");
|
|
const H5std_string DTYPENAME("compound");
|
|
|
|
// Compound datatype
|
|
typedef struct s1_t {
|
|
unsigned int a;
|
|
float b;
|
|
} s1_t;
|
|
|
|
static void
|
|
test_file_name()
|
|
{
|
|
// Output message about test being performed.
|
|
SUBTEST("File Name");
|
|
|
|
H5std_string file_name;
|
|
try {
|
|
// Create a file using default properties.
|
|
H5File file4(FILE4, H5F_ACC_TRUNC);
|
|
|
|
// Get file name from the file instance.
|
|
file_name = file4.getFileName();
|
|
verify_val(file_name, FILE4, "H5File::getFileName", __LINE__, __FILE__);
|
|
|
|
// Create a group in the root group.
|
|
Group group(file4.createGroup(GROUPNAME, 0));
|
|
|
|
// Get and verify file name via a group.
|
|
file_name = group.getFileName();
|
|
verify_val(file_name, FILE4, "Group::getFileName", __LINE__, __FILE__);
|
|
|
|
// Create the data space.
|
|
hsize_t dims[RANK] = {NX, NY};
|
|
DataSpace space(RANK, dims);
|
|
|
|
// Create a new dataset.
|
|
DataSet dataset(file4.createDataSet(DSETNAME, PredType::NATIVE_INT, space));
|
|
|
|
// Get and verify file name via a dataset.
|
|
file_name = dataset.getFileName();
|
|
verify_val(file_name, FILE4, "DataSet::getFileName", __LINE__, __FILE__);
|
|
|
|
// Create an attribute for the dataset.
|
|
Attribute attr(dataset.createAttribute(DATTRNAME, PredType::NATIVE_INT, space));
|
|
|
|
// Get and verify file name via an attribute.
|
|
file_name = attr.getFileName();
|
|
verify_val(file_name, FILE4, "Attribute::getFileName", __LINE__, __FILE__);
|
|
|
|
// Create a compound datatype.
|
|
CompType comp_type(sizeof(s1_t));
|
|
|
|
// Insert fields.
|
|
comp_type.insertMember("a", HOFFSET(s1_t, a), PredType::NATIVE_INT);
|
|
comp_type.insertMember("b", HOFFSET(s1_t, b), PredType::NATIVE_FLOAT);
|
|
|
|
// Save it on file.
|
|
comp_type.commit(file4, DTYPENAME);
|
|
|
|
// Get and verify file name via a committed datatype.
|
|
comp_type.getFileName();
|
|
verify_val(file_name, FILE4, "CompType::getFileName", __LINE__, __FILE__);
|
|
PASSED();
|
|
} // end of try block
|
|
|
|
catch (Exception &E) {
|
|
issue_fail_msg("test_file_name()", __LINE__, __FILE__, E.getCDetailMsg());
|
|
}
|
|
} // test_file_name()
|
|
|
|
/*-------------------------------------------------------------------------
|
|
*
|
|
* Function: test_file_attribute
|
|
*
|
|
* Purpose Test file attributes
|
|
*
|
|
* Return None
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
const int RANK1 = 1;
|
|
const int ATTR1_DIM1 = 3;
|
|
const H5std_string FILE5("tfattrs.h5");
|
|
const H5std_string FATTR1_NAME("file attribute 1");
|
|
const H5std_string FATTR2_NAME("file attribute 2");
|
|
int fattr_data[ATTR1_DIM1] = {512, -234, 98123}; // Test data for file attribute
|
|
int dattr_data[ATTR1_DIM1] = {256, -123, 1000}; // Test data for dataset attribute
|
|
|
|
static void
|
|
test_file_attribute()
|
|
{
|
|
int rdata[ATTR1_DIM1];
|
|
int i;
|
|
|
|
// Output message about test being performed
|
|
SUBTEST("File Attribute");
|
|
|
|
H5std_string file_name;
|
|
try {
|
|
// Create a file using default properties.
|
|
H5File file5(FILE5, H5F_ACC_TRUNC);
|
|
|
|
// Create the data space
|
|
hsize_t dims[RANK1] = {ATTR1_DIM1};
|
|
DataSpace space(RANK1, dims);
|
|
|
|
// Create two attributes for the file
|
|
Attribute fattr1(file5.createAttribute(FATTR1_NAME, PredType::NATIVE_FLOAT, space));
|
|
Attribute fattr2(file5.createAttribute(FATTR2_NAME, PredType::NATIVE_INT, space));
|
|
|
|
fattr2.write(PredType::NATIVE_INT, fattr_data);
|
|
|
|
try {
|
|
// Try to create the same attribute again (should fail)
|
|
Attribute fattr_dup(file5.createAttribute(FATTR2_NAME, PredType::NATIVE_INT, space));
|
|
// Should FAIL but didn't, so throw an invalid action exception
|
|
throw InvalidActionException("H5File createAttribute",
|
|
"Attempted to create an existing attribute.");
|
|
}
|
|
catch (AttributeIException &E) // catch creating existing attribute
|
|
{
|
|
} // do nothing, FAIL expected
|
|
|
|
// Create a new dataset
|
|
DataSet dataset(file5.createDataSet(DSETNAME, PredType::NATIVE_INT, space));
|
|
|
|
// Create an attribute for the dataset
|
|
Attribute dattr(dataset.createAttribute(DATTRNAME, PredType::NATIVE_INT, space));
|
|
|
|
// Write data to the second file attribute
|
|
dattr.write(PredType::NATIVE_INT, dattr_data);
|
|
|
|
// Test flushing out the data from the attribute object
|
|
dattr.flush(H5F_SCOPE_GLOBAL);
|
|
|
|
// Get and verify the number of all objects in the file
|
|
// Current: 1 file, 2 file attr, 1 ds, and 1 ds attr.
|
|
ssize_t num_objs = file5.getObjCount(H5F_OBJ_ALL);
|
|
verify_val(num_objs, 5, "H5File::getObjCount", __LINE__, __FILE__);
|
|
|
|
num_objs = file5.getObjCount(H5F_OBJ_GROUP);
|
|
verify_val(num_objs, 0, "H5File::getObjCount(H5F_OBJ_GROUP)", __LINE__, __FILE__);
|
|
num_objs = file5.getObjCount(H5F_OBJ_DATASET);
|
|
verify_val(num_objs, 1, "H5File::getObjCount(H5F_OBJ_DATASET)", __LINE__, __FILE__);
|
|
num_objs = file5.getObjCount(H5F_OBJ_ATTR);
|
|
verify_val(num_objs, 3, "H5File::getObjCount(H5F_OBJ_ATTR)", __LINE__, __FILE__);
|
|
num_objs = file5.getObjCount(H5F_OBJ_DATATYPE);
|
|
verify_val(num_objs, 0, "H5File::getObjCount(H5F_OBJ_DATATYPE)", __LINE__, __FILE__);
|
|
num_objs = file5.getObjCount(H5F_OBJ_FILE);
|
|
verify_val(num_objs, 1, "H5File::getObjCount(H5F_OBJ_FILE)", __LINE__, __FILE__);
|
|
|
|
// Get the file name using the attributes
|
|
H5std_string fname = fattr1.getFileName();
|
|
verify_val(fname, FILE5, "H5File::getFileName()", __LINE__, __FILE__);
|
|
|
|
fname.clear();
|
|
fname = dattr.getFileName();
|
|
verify_val(fname, FILE5, "H5File::getFileName()", __LINE__, __FILE__);
|
|
|
|
// Get the class of a file attribute's datatype
|
|
H5T_class_t atclass = fattr1.getTypeClass();
|
|
verify_val(static_cast<long>(atclass), static_cast<long>(H5T_FLOAT), "Attribute::getTypeClass()",
|
|
__LINE__, __FILE__);
|
|
|
|
// Get and verify the number of attributes attached to a file
|
|
int n_attrs = file5.getNumAttrs();
|
|
verify_val(n_attrs, 2, "H5File::getNumAttrs()", __LINE__, __FILE__);
|
|
|
|
// Get and verify the number of attributes attached to a dataset
|
|
n_attrs = 0;
|
|
n_attrs = dataset.getNumAttrs();
|
|
verify_val(n_attrs, 1, "DataSet::getNumAttrs()", __LINE__, __FILE__);
|
|
|
|
// Read back attribute's data
|
|
HDmemset(rdata, 0, sizeof(rdata));
|
|
dattr.read(PredType::NATIVE_INT, rdata);
|
|
/* Check results */
|
|
for (i = 0; i < ATTR1_DIM1; i++) {
|
|
if (rdata[i] != dattr_data[i]) {
|
|
H5_FAILED();
|
|
cerr << endl;
|
|
cerr << "element [" << i << "] is " << rdata[i] << "but should have been " << dattr_data[i]
|
|
<< endl;
|
|
}
|
|
}
|
|
PASSED();
|
|
} // end of try block
|
|
|
|
catch (Exception &E) {
|
|
issue_fail_msg("test_file_attribute()", __LINE__, __FILE__, E.getCDetailMsg());
|
|
}
|
|
} // test_file_attribute()
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* Function: test_libver_bounds_real
|
|
*
|
|
* Purpose Verify that a file created and modified with the
|
|
* specified libver bounds has the specified object header
|
|
* versions for the right objects.
|
|
*
|
|
* Return None
|
|
*
|
|
* Programmer Binh-Minh Ribler (use C version)
|
|
* March, 2015
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
const H5std_string FILE6("tfile5.h5");
|
|
const H5std_string ROOTGROUP("/");
|
|
const H5std_string GROUP1("/G1");
|
|
const H5std_string SUBGROUP3("/G1/G3");
|
|
|
|
static void
|
|
test_libver_bounds_real(H5F_libver_t libver_create, unsigned oh_vers_create, H5F_libver_t libver_mod,
|
|
unsigned oh_vers_mod)
|
|
{
|
|
try {
|
|
|
|
/*
|
|
* Create a new file using the default creation property and access property
|
|
* with latest library version.
|
|
*/
|
|
FileAccPropList fapl;
|
|
fapl.setLibverBounds(libver_create, H5F_LIBVER_LATEST);
|
|
H5File file(FILE6, H5F_ACC_TRUNC, FileCreatPropList::DEFAULT, fapl);
|
|
|
|
/*
|
|
* Make sure the root group has the correct object header version
|
|
*/
|
|
unsigned obj_version = file.childObjVersion(ROOTGROUP);
|
|
verify_val(obj_version, oh_vers_create, "H5File::childObjVersion", __LINE__, __FILE__);
|
|
|
|
// Verify object header version another way
|
|
H5O_native_info_t ninfo;
|
|
HDmemset(&ninfo, 0, sizeof(ninfo));
|
|
file.getNativeObjinfo(ninfo, H5O_NATIVE_INFO_HDR);
|
|
verify_val(ninfo.hdr.version, oh_vers_create, "H5File::getNativeObjinfo", __LINE__, __FILE__);
|
|
|
|
/*
|
|
* Reopen the file and make sure the root group still has the correct
|
|
* version
|
|
*/
|
|
file.close();
|
|
|
|
fapl.setLibverBounds(libver_mod, H5F_LIBVER_LATEST);
|
|
|
|
file.openFile(FILE6, H5F_ACC_RDWR, fapl);
|
|
|
|
obj_version = file.childObjVersion(ROOTGROUP);
|
|
verify_val(obj_version, oh_vers_create, "H5File::childObjVersion", __LINE__, __FILE__);
|
|
|
|
/*
|
|
* Create a group named "/G1" in the file, and make sure it has the correct
|
|
* object header version
|
|
*/
|
|
Group group = file.createGroup(GROUP1);
|
|
|
|
obj_version = group.objVersion();
|
|
verify_val(obj_version, oh_vers_mod, "Group::objVersion", __LINE__, __FILE__);
|
|
|
|
// Verify object header version another way
|
|
HDmemset(&ninfo, 0, sizeof(ninfo));
|
|
group.getNativeObjinfo(ninfo, H5O_NATIVE_INFO_HDR);
|
|
verify_val(ninfo.hdr.version, oh_vers_mod, "Group::getNativeObjinfo", __LINE__, __FILE__);
|
|
|
|
group.close(); // close "/G1"
|
|
|
|
/*
|
|
* Create a group named "/G1/G3" in the file, and make sure it has the
|
|
* correct object header version
|
|
*/
|
|
group = file.createGroup(SUBGROUP3);
|
|
|
|
obj_version = group.objVersion();
|
|
verify_val(obj_version, oh_vers_mod, "Group::objVersion", __LINE__, __FILE__);
|
|
|
|
group.close(); // close "/G1/G3"
|
|
|
|
/*
|
|
* Make sure the root group still has the correct object header version
|
|
*/
|
|
obj_version = file.childObjVersion(ROOTGROUP);
|
|
verify_val(obj_version, oh_vers_create, "H5File::childObjVersion", __LINE__, __FILE__);
|
|
|
|
// Everything should be closed as they go out of scope
|
|
} // end of try block
|
|
|
|
catch (Exception &E) {
|
|
issue_fail_msg("test_libver_bounds_real()", __LINE__, __FILE__, E.getCDetailMsg());
|
|
}
|
|
|
|
} /* end test_libver_bounds_real() */
|
|
|
|
/*-------------------------------------------------------------------------
|
|
*
|
|
* Function: test_libver_bounds
|
|
*
|
|
* Purpose Verify that a file created and modified with various
|
|
* libver bounds is handled correctly.
|
|
*
|
|
* Return None
|
|
*
|
|
* Programmer Binh-Minh Ribler (use C version)
|
|
* March 2015
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
static void
|
|
test_libver_bounds()
|
|
{
|
|
// Output message about test being performed
|
|
SUBTEST("Setting library version bounds");
|
|
|
|
/* Run the tests */
|
|
test_libver_bounds_real(H5F_LIBVER_EARLIEST, H5O_VERSION_1, H5F_LIBVER_LATEST, H5O_VERSION_2);
|
|
test_libver_bounds_real(H5F_LIBVER_LATEST, H5O_VERSION_2, H5F_LIBVER_EARLIEST, H5O_VERSION_2);
|
|
PASSED();
|
|
} /* end test_libver_bounds() */
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* Function: test_commonfg
|
|
*
|
|
* Purpose Verify that H5File works as a root group.
|
|
*
|
|
* Return None
|
|
*
|
|
* Programmer Binh-Minh Ribler (use C version)
|
|
* March, 2015
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
static void
|
|
test_commonfg()
|
|
{
|
|
// Output message about test being performed
|
|
SUBTEST("Root group");
|
|
|
|
try {
|
|
// Create a file using default properties.
|
|
H5File file4(FILE4, H5F_ACC_TRUNC);
|
|
|
|
// Try opening the root group.
|
|
Group rootgroup(file4.openGroup(ROOTGROUP));
|
|
|
|
// Create a group in the root group.
|
|
Group group(rootgroup.createGroup(GROUPNAME, 0));
|
|
|
|
// Create the data space.
|
|
hsize_t dims[RANK] = {NX, NY};
|
|
DataSpace space(RANK, dims);
|
|
|
|
// Create a new dataset.
|
|
DataSet dataset(group.createDataSet(DSETNAME, PredType::NATIVE_INT, space));
|
|
|
|
// Get and verify file name via a dataset.
|
|
H5std_string file_name = dataset.getFileName();
|
|
verify_val(file_name, FILE4, "DataSet::getFileName", __LINE__, __FILE__);
|
|
|
|
// Create an attribute for the dataset.
|
|
Attribute attr(dataset.createAttribute(DATTRNAME, PredType::NATIVE_INT, space));
|
|
|
|
// Get and verify file name via an attribute.
|
|
file_name = attr.getFileName();
|
|
verify_val(file_name, FILE4, "Attribute::getFileName", __LINE__, __FILE__);
|
|
|
|
// Create an attribute for the file via root group.
|
|
Attribute rootg_attr(rootgroup.createAttribute(FATTRNAME, PredType::NATIVE_INT, space));
|
|
|
|
// Get and verify file name via an attribute.
|
|
file_name = attr.getFileName();
|
|
verify_val(file_name, FILE4, "Attribute::getFileName", __LINE__, __FILE__);
|
|
|
|
PASSED();
|
|
} // end of try block
|
|
|
|
catch (Exception &E) {
|
|
issue_fail_msg("test_commonfg()", __LINE__, __FILE__, E.getCDetailMsg());
|
|
}
|
|
|
|
} /* end test_commonfg() */
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* Function: test_file_info
|
|
*
|
|
* Purpose Verify that various properties in a file creation property
|
|
* lists are stored correctly in the file and can be retrieved
|
|
* when the file is re-opened.
|
|
*
|
|
* Return None
|
|
*
|
|
* Programmer Binh-Minh Ribler
|
|
* February, 2017
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
const H5std_string FILE7("tfile7.h5");
|
|
const hsize_t FSP_SIZE_DEF = 4096;
|
|
const hsize_t FSP_SIZE512 = 512;
|
|
|
|
static void
|
|
test_file_info()
|
|
{
|
|
// Output message about test being performed
|
|
SUBTEST("File general information");
|
|
|
|
hsize_t out_threshold = 0; // Free space section threshold to get
|
|
hbool_t out_persist = FALSE; // Persist free-space read
|
|
// File space handling strategy
|
|
H5F_fspace_strategy_t out_strategy = H5F_FSPACE_STRATEGY_FSM_AGGR;
|
|
|
|
try {
|
|
// Create a file using default properties.
|
|
H5File tempfile(FILE7, H5F_ACC_TRUNC);
|
|
|
|
// Get the file's version information.
|
|
H5F_info2_t finfo;
|
|
tempfile.getFileInfo(finfo);
|
|
verify_val(static_cast<long>(finfo.super.version), 0, "H5File::getFileInfo", __LINE__, __FILE__);
|
|
verify_val(static_cast<long>(finfo.free.version), 0, "H5File::getFileInfo", __LINE__, __FILE__);
|
|
verify_val(static_cast<long>(finfo.sohm.version), 0, "H5File::getFileInfo", __LINE__, __FILE__);
|
|
|
|
// Close the file.
|
|
tempfile.close();
|
|
|
|
// Create file creation property list.
|
|
FileCreatPropList fcpl;
|
|
|
|
// Retrieve file space information.
|
|
fcpl.getFileSpaceStrategy(out_strategy, out_persist, out_threshold);
|
|
|
|
// Verify file space information.
|
|
verify_val(static_cast<long>(out_strategy), static_cast<long>(H5F_FSPACE_STRATEGY_FSM_AGGR),
|
|
"H5File::getFileInfo", __LINE__, __FILE__);
|
|
verify_val(out_persist, FALSE, "H5File::getFileInfo", __LINE__, __FILE__);
|
|
verify_val(static_cast<long>(out_threshold), 1, "H5File::getFileInfo", __LINE__, __FILE__);
|
|
|
|
/* Retrieve file space page size */
|
|
hsize_t out_fsp_psize = fcpl.getFileSpacePagesize();
|
|
verify_val(out_fsp_psize, FSP_SIZE_DEF, "FileCreatPropList::getFileSpacePagesize", __LINE__,
|
|
__FILE__);
|
|
|
|
// Set various file information.
|
|
fcpl.setUserblock(F2_USERBLOCK_SIZE);
|
|
fcpl.setSizes(F2_OFFSET_SIZE, F2_LENGTH_SIZE);
|
|
fcpl.setSymk(F2_SYM_INTERN_K, F2_SYM_LEAF_K);
|
|
fcpl.setIstorek(F2_ISTORE);
|
|
|
|
hsize_t threshold = 5; // Free space section threshold to set
|
|
hbool_t persist = TRUE; // Persist free-space to set
|
|
H5F_fspace_strategy_t strategy = H5F_FSPACE_STRATEGY_PAGE;
|
|
|
|
fcpl.setFileSpaceStrategy(strategy, persist, threshold);
|
|
fcpl.setFileSpacePagesize(FSP_SIZE512);
|
|
|
|
// Creating a file with the non-default file creation property list
|
|
// should create a version 1 superblock
|
|
|
|
// Create file with custom file creation property list.
|
|
H5File file7(FILE7, H5F_ACC_TRUNC, fcpl);
|
|
|
|
// Close the file creation property list.
|
|
fcpl.close();
|
|
|
|
// Get the file's version information.
|
|
file7.getFileInfo(finfo);
|
|
verify_val(static_cast<long>(finfo.super.version), 2, "H5File::getFileInfo", __LINE__, __FILE__);
|
|
verify_val(static_cast<long>(finfo.free.version), 0, "H5File::getFileInfo", __LINE__, __FILE__);
|
|
verify_val(static_cast<long>(finfo.sohm.version), 0, "H5File::getFileInfo", __LINE__, __FILE__);
|
|
|
|
// Close the file.
|
|
file7.close();
|
|
|
|
// Re-open the file.
|
|
file7.openFile(FILE7, H5F_ACC_RDONLY);
|
|
|
|
// Get the file's creation property list.
|
|
FileCreatPropList fcpl2 = file7.getCreatePlist();
|
|
|
|
// Get the file's version information.
|
|
file7.getFileInfo(finfo);
|
|
verify_val(static_cast<long>(finfo.super.version), 2, "H5File::getFileInfo", __LINE__, __FILE__);
|
|
verify_val(static_cast<long>(finfo.free.version), 0, "H5File::getFileInfo", __LINE__, __FILE__);
|
|
verify_val(static_cast<long>(finfo.sohm.version), 0, "H5File::getFileInfo", __LINE__, __FILE__);
|
|
|
|
// Retrieve the property values & check them.
|
|
hsize_t userblock = fcpl2.getUserblock();
|
|
verify_val(userblock, F2_USERBLOCK_SIZE, "FileCreatPropList::getUserblock", __LINE__, __FILE__);
|
|
|
|
size_t off_size = 0, len_size = 0;
|
|
fcpl2.getSizes(off_size, len_size);
|
|
verify_val(off_size, F2_OFFSET_SIZE, "FileCreatPropList::getSizes", __LINE__, __FILE__);
|
|
verify_val(len_size, F2_LENGTH_SIZE, "FileCreatPropList::getSizes", __LINE__, __FILE__);
|
|
|
|
unsigned sym_ik = 0, sym_lk = 0;
|
|
fcpl2.getSymk(sym_ik, sym_lk);
|
|
verify_val(sym_ik, F2_SYM_INTERN_K, "FileCreatPropList::getSymk", __LINE__, __FILE__);
|
|
verify_val(sym_lk, F2_SYM_LEAF_K, "FileCreatPropList::getSymk", __LINE__, __FILE__);
|
|
|
|
unsigned istore_ik = fcpl2.getIstorek();
|
|
verify_val(istore_ik, F2_ISTORE, "FileCreatPropList::getIstorek", __LINE__, __FILE__);
|
|
|
|
/* ret=H5Pget_shared_mesg_nindexes(fcpl2,&nindexes);
|
|
CHECK(ret, FAIL, "H5Pget_shared_mesg_nindexes");
|
|
VERIFY(nindexes, MISC11_NINDEXES, "H5Pget_shared_mesg_nindexes");
|
|
*/
|
|
|
|
// Get and verify the file space info from the creation property list */
|
|
fcpl2.getFileSpaceStrategy(out_strategy, out_persist, out_threshold);
|
|
verify_val(static_cast<long>(out_strategy), static_cast<long>(strategy),
|
|
"FileCreatPropList::getFileSpaceStrategy", __LINE__, __FILE__);
|
|
verify_val(out_persist, persist, "FileCreatPropList::getFileSpaceStrategy", __LINE__, __FILE__);
|
|
verify_val(out_threshold, threshold, "FileCreatPropList::getFileSpaceStrategy", __LINE__, __FILE__);
|
|
|
|
out_fsp_psize = fcpl2.getFileSpacePagesize();
|
|
verify_val(out_fsp_psize, FSP_SIZE512, "FileCreatPropList::getFileSpacePagesize", __LINE__, __FILE__);
|
|
|
|
PASSED();
|
|
} // end of try block
|
|
catch (Exception &E) {
|
|
issue_fail_msg("test_filespace_info()", __LINE__, __FILE__, E.getCDetailMsg());
|
|
}
|
|
} /* test_file_info() */
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* Function: test_file
|
|
*
|
|
* Purpose Main file testing routine
|
|
*
|
|
* Return None
|
|
*
|
|
* Programmer Binh-Minh Ribler (use C version)
|
|
* January 2001
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
extern "C" void
|
|
test_file()
|
|
{
|
|
// Output message about test being performed
|
|
MESSAGE(5, ("Testing File I/O Operations\n"));
|
|
|
|
test_file_create(); // Test file creation (also creation templates)
|
|
test_file_open(); // Test file opening
|
|
test_file_size(); // Test file size
|
|
test_file_num(); // Test file number
|
|
test_file_name(); // Test getting file's name
|
|
test_file_attribute(); // Test file attribute feature
|
|
test_libver_bounds(); // Test format version
|
|
test_commonfg(); // Test H5File as a root group
|
|
test_file_info(); // Test various file info
|
|
} // test_file()
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* Function: cleanup_file
|
|
*
|
|
* Purpose Cleanup temporary test files
|
|
*
|
|
* Return none
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
#ifdef __cplusplus
|
|
extern "C"
|
|
#endif
|
|
void
|
|
cleanup_file()
|
|
{
|
|
HDremove(FILE1.c_str());
|
|
HDremove(FILE2.c_str());
|
|
HDremove(FILE3.c_str());
|
|
HDremove(FILE4.c_str());
|
|
HDremove(FILE5.c_str());
|
|
HDremove(FILE6.c_str());
|
|
HDremove(FILE7.c_str());
|
|
} // cleanup_file
|