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1278 Commits

Author SHA1 Message Date
Allen Byrne
451a91e53b [svn-r26594] Merge macros and fortran changes from dual_binary feature. 
Tested: local linux
 2015-03-25 17:08:46 -05:00
Scot Breitenfeld
25aa1845e6 [svn-r26541] fixed array bounds starting from zero in H5Pff.f90 routines. 
Tested: h5committest
 2015-03-23 12:58:57 -05:00
Allen Byrne
1180b57990 [svn-r26530] Add back Windows dll export define 2015-03-23 12:01:51 -05:00
Scot Breitenfeld
23afd10544 [svn-r26512] Reverted changed 26488 and 26477 
Tested: h5committest
 2015-03-20 16:48:41 -05:00
Jerome Soumagne
1cd7c16a9d [svn-r26509] Run reconfigure after merges from autotools_rework branch. 2015-03-20 14:15:51 -05:00
Jerome Soumagne
8a1d1b24cf [svn-r26505] Merge r26435 from autotools_rework branch. 
Remove DEFAULT_LIBS from configure.ac and irix6.x config file which
was using it.

Remove references to IRIX/irix* platform.
 2015-03-20 14:04:30 -05:00
Allen Byrne
9501c16857 [svn-r26490] Remove unused defines 2015-03-19 16:37:04 -05:00
Scot Breitenfeld
d75a6763ec [svn-r26488] Updated developers notes due to the removal of COMMON and EQUIVALANCE and how everything is now put together. 
Not tested, comments only.
 2015-03-19 16:09:42 -05:00
Scot Breitenfeld
c26d21bb63 [svn-r26481] Removed compiler warnings. HDF5-239 
Tested: h5committest.
 2015-03-19 14:14:19 -05:00
Scot Breitenfeld
8f8cbb6225 [svn-r26479] Fix for: HDFFV-9162 
h5pget_class_f should return hid_t for classtype

Also removed all left over C comment artifacts /* and */ in the Fortran comments.

Tested: h5committest
 2015-03-19 12:11:47 -05:00
Scot Breitenfeld
c2c3294c21 [svn-r26477] Removed COMMON and EQUIVALENCE usage from Fortran Source. 
Also removed disabling shared when building Fortran on the Mac. 
These fixes should fix all the building shared with Fortran problems. HDF5-247

Also fixes array bounds starting from zero in H5Pff.f90 routines.

Tested: h5committest
 2015-03-19 10:38:27 -05:00
HDF Tester
ead7273c2c [svn-r26459] Snapshot version 1.9 release 215 2015-03-15 06:08:23 -05:00
Scot Breitenfeld
2d6a979b25 [svn-r26452] Fixed formatting of copyright. 2015-03-13 13:48:10 -05:00
Scot Breitenfeld
04a3b2a458 [svn-r26417] Removed compiler warnings from HL. HDF5-237 
Tested: h5committest
 2015-03-10 14:02:41 -05:00
Elena Pourmal
1f4f709e8c [svn-r26401] Fixed warnings in the C stubs for Fortran wrappers. See Crucible review HDF5-238. 
Tested on platypus with gcc/gfortran 4.9.2, jam and emu with the default compilers.
 2015-03-09 10:51:09 -05:00
Dana Robinson
7462a7ef1c [svn-r26329] Merge of r26069, r26070, and r26072 from the features/autotools_rework 
branch.

Removed the configure option that allows selective disabling of individual
internal filters (fletcher32, shuffle, etc.).

This feature mucked up the code with a lot of #ifdefs, saved very little space,
and was not scalable to a general scheme for library size reduction. We've
decided to remove the feature while we investigate a more general scheme for
decreasing the library size.

Part of: HDFFV-9086

Tested on: h5committest
 2015-02-27 07:50:38 -05:00
Mohamad Chaarawi
c4044e0c85 [svn-r26303] remove files with .clog2 extension generated by MPE when doing make clean. 2015-02-25 13:48:31 -05:00
Allen Byrne
f679b9006d [svn-r26253] Update CMake with fortran source properties and defines, correct name of hl fortran examples option check 2015-02-20 12:25:56 -05:00
Scot Breitenfeld
6ce3158da7 [svn-r26247] Reverted back from using 'USE MPI' to include 'mpif.h' since windows does not seem to support 'USE MPI'. 2015-02-20 08:59:18 -05:00
Scot Breitenfeld
3eeed2f1d5 [svn-r26241] Fixed issue with default 8 byte integers using xlf compilers. 2015-02-19 11:17:16 -05:00
Scot Breitenfeld
3a03c275e9 [svn-r26233] Disable h5tenum_insert_f if F2003 is enabled. 2015-02-19 09:02:36 -05:00
Allen Byrne
a3f987daa9 [svn-r26230] Add def file comment when it is F2003 2015-02-19 08:57:48 -05:00
Scot Breitenfeld
93379cf58f [svn-r26217] Added H5T_PROVISIONAL_mp_H5TENUM_INSERT_F 2015-02-18 15:03:45 -05:00
Scot Breitenfeld
27a385d557 [svn-r26214] Fix for HDFFV-8908: 
h5tenum_insert_f does not work with default 8 byte integers (xlf compiler)
 2015-02-18 13:51:13 -05:00
Scot Breitenfeld
3a303d3dd3 [svn-r26211] revert ci 26204 2015-02-18 12:45:42 -05:00
Scot Breitenfeld
f1ffd2202b [svn-r26210] Removed debugging statement and typos. 2015-02-18 12:30:31 -05:00
Allen Byrne
73bb11dda3 [svn-r26208] Update cmake minimums 2015-02-18 11:56:22 -05:00
Scot Breitenfeld
a75fd4c960 [svn-r26205] Fix for HDFFV-8908: 
h5tenum_insert_f does not work with default 8 byte integers (xlf compiler)
 2015-02-18 11:42:47 -05:00
Scot Breitenfeld
b28b5fade9 [svn-r26188] Merged autotools fixes into the trunk: 
HDFFV-9089, HDFFV-9091, HDFFV-9092, HDFFV-9094, HDFFV-9095
 2015-02-16 12:17:49 -05:00
Mohamad Chaarawi
74fbb9e327 [svn-r26180] merge configure fixes for HDFFV-9068,9069,9096,9097,9135 from autotools_rework branch: 
- Remove Infering parallel compilers (C and Fortran) from configure.ac
- Remove restriction to build shared with parallel
- Cleanup parallel sections in configure.ac
- remove large file support checks
- MPE fixes.

tested with h5committest.
 2015-02-16 11:17:03 -05:00
HDF Tester
9a376e4ee9 [svn-r26177] Snapshot version 1.9 release 214 2015-02-15 06:13:34 -05:00
Allen Byrne
ab75986b8c [svn-r26161] Fix cmake case. 
Turn on F2003 by default.
Set source properties in fortran cmake files.
 2015-02-12 16:52:48 -05:00
HDF Tester
f4a60fc34c [svn-r26146] Snapshot version 1.9 release 213 2015-02-08 06:05:07 -05:00
Scot Breitenfeld
06d1971f41 [svn-r26124] Fixed issue with deprecated symbols for H5G constants 2015-02-04 09:38:16 -05:00
Scot Breitenfeld
5060fb1050 [svn-r26122] Fix for HDFFV-9040 h5rget_object_type_f returns different types than indicated by API 
Slight change of global variable definitions from C.

Tested: jam.
 2015-02-03 13:52:27 -05:00
HDF Tester
67f41bf9f8 [svn-r26092] Snapshot version 1.9 release 212 2015-02-01 06:03:18 -05:00
Allen Byrne
055348122d [svn-r26040] HDFFV-9018: Install pdb files to bin folder with dlls. 2015-01-26 15:23:19 -05:00
Scot Breitenfeld
374f064f82 [svn-r26011] Added (i.e. re-added) missing h5oget_info_c definition. 2015-01-23 08:54:04 -05:00
Scot Breitenfeld
1e3f530848 [svn-r26010] Fix for: 
HDFFV-9049
Intel 15.0 15.0.1 Fails with --enable-fortran2003

Added BIND to the Fortran 2003 functions.

Tested: windows (tested concept)
        linux (--enable-fortran and --enable-fortran2003)
 2015-01-22 16:56:03 -05:00
Scot Breitenfeld
324f087d05 [svn-r26009] Code Comment cleanup: 
-----------------------
Remove the numbers in the comments associated with:

       H5G_UNKNOWN_F (-1)
       H5G_LINK_F      0
       H5G_GROUP_F     1
       H5G_DATASET_F   2
       H5G_TYPE_F      3

These should not be defined as a number since they can changed. They should be considered named parameters, not actual values. 

HDFFV-9040
h5rget_object_type_f returns different types than indicated by API
 2015-01-22 16:53:30 -05:00
HDF Tester
234e77b3f9 [svn-r25981] Snapshot version 1.9 release 211 2015-01-18 06:01:21 -05:00
Scot Breitenfeld
485faa47e7 [svn-r25980] Reverting check-in 25978, C_LONG_DOUBLE seems to be 16 bytes sometimes and 10 bytes other times. Not sure why. 2015-01-15 10:18:45 -05:00
Scot Breitenfeld
c6cf45e3e7 [svn-r25978] Bug fix for HDFFV-8847 
Tested: h5committest
 2015-01-13 11:23:07 -05:00
HDF Tester
d3ddfe842d [svn-r25975] Snapshot version 1.9 release 210 2015-01-11 06:05:36 -05:00
HDF Tester
509cd32da2 [svn-r25949] Snapshot version 1.9 release 209 2015-01-04 06:04:11 -05:00
Quincey Koziol
b65eae7aee [svn-r25929] Description: 
Clean up EOF code within library and add 'mem_type' parameter to 'get_eof'
VFD callback, to avoid various ambiguous situations, particularly with the
multi VFD.  (Supports changes for 'avoid_truncate' feature also)

Tested on:
    MacOSX/64 10.10.1 (amazon) w/serial & parallel
    h5committest forthcoming
 2014-12-29 01:02:06 -05:00
HDF Tester
b7047b6425 [svn-r25924] Snapshot version 1.9 release 208 2014-12-28 06:03:37 -05:00
Scot Breitenfeld
fc8767cf82 [svn-r25923] Added name to the BIND(C) attribute, removed the !DEC$ statements for windows. 2014-12-23 10:08:55 -05:00
Scot Breitenfeld
443bc1200f [svn-r25920] Undo BIND(C) addition. 2014-12-23 09:34:17 -05:00
Scot Breitenfeld
51abd359f3 [svn-r25917] Added BIND(C) to fortran functions that pass a VALUE. 2014-12-22 09:12:04 -05:00
HDF Tester
c8fea60113 [svn-r25915] Snapshot version 1.9 release 207 2014-12-21 05:45:34 -05:00
HDF Tester
118710f360 [svn-r25886] Snapshot version 1.9 release 206 2014-12-14 05:46:08 -05:00
HDF Tester
c1763bef53 [svn-r25864] Snapshot version 1.9 release 205 2014-12-07 05:51:49 -05:00
HDF Tester
ccbd46e914 [svn-r25855] Snapshot version 1.9 release 204 2014-11-30 05:49:53 -05:00
Allen Byrne
0a21243303 [svn-r25847] Correct typos in linux export of mod 2014-11-25 16:33:04 -05:00
HDF Tester
b59663156d [svn-r25834] Snapshot version 1.9 release 203 2014-11-23 05:47:28 -05:00
Quincey Koziol
89e2c8822d [svn-r25766] Description: 
Revert r25273, 25283 & 25439 (the hyperslab improvement changes).  They
are buggy and it's taking me a long time to correct the problem.  I'll check
in a revised form of the changes when I've got them straightened out.

Tested on:
    Mac OSX 10.10.0 (amazon) w/gcc 4.9.x, C++, FORTRAN
    Linux 2.6.x (jam) w/parallel
 2014-11-03 15:13:25 -05:00
HDF Tester
2fcec016a8 [svn-r25762] Snapshot version 1.9 release 202 2014-11-02 04:51:44 -05:00
HDF Tester
290dfb8799 [svn-r25736] Snapshot version 1.9 release 201 2014-10-26 06:00:38 -05:00
HDF Tester
2a668bd0fc [svn-r25720] Snapshot version 1.9 release 200 2014-10-19 05:31:05 -05:00
Scot Breitenfeld
d527a825d4 [svn-r25707] Added missing type cast for hid_t_f ids. 2014-10-15 16:29:29 -05:00
HDF Tester
e8ffff6853 [svn-r25693] Snapshot version 1.9 release 199 2014-10-12 05:28:29 -05:00
Allen Byrne
6fdac87ac1 [svn-r25691] File is not generated by non-2003 compliant fortran compilers. 
Tested: jam and local linux
 2014-10-10 12:41:13 -05:00
HDF Tester
e6702f2cae [svn-r25668] Snapshot version 1.9 release 198 2014-10-05 05:27:58 -05:00
HDF Tester
c617cbdfb0 [svn-r25627] Snapshot version 1.9 release 197 2014-09-28 05:34:35 -05:00
Scot Breitenfeld
6f2f584c42 [svn-r25626] Changed the callback function integer type from INTEGER to INTEGER(C_INT) for portability, HDFFV-8909. 2014-09-26 09:25:04 -05:00
Scot Breitenfeld
52d5e22956 [svn-r25618] Added tests for HDFFV-8879 2014-09-25 09:48:33 -05:00
HDF Tester
ae00b7b591 [svn-r25604] Snapshot version 1.9 release 196 2014-09-21 05:29:14 -05:00
HDF Tester
7f2fa8340b [svn-r25591] Snapshot version 1.9 release 195 2014-09-14 05:30:20 -05:00
HDF Tester
2154d1c6f1 [svn-r25563] Snapshot version 1.9 release 194 2014-08-31 05:31:14 -05:00
HDF Tester
77e7e788c8 [svn-r25546] Snapshot version 1.9 release 193 2014-08-24 05:32:01 -05:00
HDF Tester
3f11676e9d [svn-r25534] Snapshot version 1.9 release 192 2014-08-17 04:54:45 -05:00
Scot Breitenfeld
a72cb6e43e [svn-r25510] Added the parameters to the code comment section: 
H5T_VLEN_F (9)
             H5T_ARRAY_F (10)

No source changes.
 2014-08-05 09:06:35 -05:00
HDF Tester
1bd45cb96f [svn-r25506] Snapshot version 1.9 release 191 2014-08-03 05:01:09 -05:00
Quincey Koziol
33ea1ada24 [svn-r25496] Description: 
Merge 64-bit ID changes from branch to trunk.  (Plus a few minor cleanups
that aren't on the branch)

Tested on:
    Mac OSX/64 10.9.4 (amazon) w/C++ & FORTRAN
    (h5committested on branch already for a week)
 2014-07-30 15:55:14 -05:00
HDF Tester
2173d36d66 [svn-r25484] Snapshot version 1.9 release 190 2014-07-27 05:38:25 -05:00
Scot Breitenfeld
f41ac60621 [svn-r25483] Fixed code comments. 2014-07-24 16:11:24 -05:00
Scot Breitenfeld
c85497442b [svn-r25475] Fixed for nh5pget_fill_valuec_c where we called the wrong function 
ret_value = nh5pset_fill_value_c(prp_id, type_id, _fcdtocp(fillvalue))

HDFFV-8879

Tested: jam( intel, gnu)
 2014-07-23 13:50:06 -05:00
Scot Breitenfeld
00e4cbc963 [svn-r25473] Added VALUE to callback group_id type. Needed to fix problem when hid_t is 64-bit. 
Tested: jam (intel, gnu)
 2014-07-23 12:01:51 -05:00
Scot Breitenfeld
1ebce1bfcf [svn-r25469] Removed duplicate BIND(C) type defintion. 
Tested: (jam: gnu, intel)
 2014-07-22 15:55:08 -05:00
Scot Breitenfeld
7595d00ae5 [svn-r25440] Fixed type conversion in h5pset_fill_value and fixed for 
nh5pget_fill_valuec_c we call the wrong function
ret_value = nh5pset_fill_value_c(prp_id, type_id, _fcdtocp(fillvalue))

HDFFV-8879

Tested: jam( intel, gnu)
 2014-07-21 10:09:56 -05:00
HDF Tester
84d0a9f7cb [svn-r25434] Snapshot version 1.9 release 189 2014-07-20 05:09:27 -05:00
HDF Tester
06e4e32ba0 [svn-r25407] Snapshot version 1.9 release 188 2014-07-13 07:32:17 -05:00
Mohamad Chaarawi
06ef71a37f [svn-r25397] - remove configure checks for MPI_File_get_size and Big 
MPI_File_set_size as they are supported by most MPI implementations.
- fix bug in t_mpi.c (HDFFV-8856)
 2014-07-07 13:22:48 -05:00
HDF Tester
5ad9bfb322 [svn-r25395] Snapshot version 1.9 release 187 2014-07-06 07:31:55 -05:00
HDF Tester
8925b39181 [svn-r25378] Snapshot version 1.9 release 186 2014-06-29 05:24:43 -05:00
HDF Tester
fbaf82bc3c [svn-r25339] Snapshot version 1.9 release 185 2014-06-22 05:26:37 -05:00
Allen Byrne
c194e9c9a7 [svn-r25313] Use cmake var to store name of created h5_test_kind_xxxx mod file. 
Tested: local linux
 2014-06-18 09:28:09 -05:00
Scot Breitenfeld
bfb60a0cc1 [svn-r25304] Fixes latest check-in errors for: 
HDFFV-8653
replace non-standard sizeof in the fortran tests with c_sizeof

(1) Removed the overloaded h5_sizeof functions for characters and integer arrays since Sun compilers don't allow them to be passed into a function that uses sizeof.

(2) Requested min. precision for reals to avoid duplicate interfaces when the flag -r8 (or equiv.) is set.

tested:
*jam: intel, -i8 -r8 --enable-fortran2003
*jam: pgi, --enable-fortran2003
*emu: sun, --enable-fortran2003
 2014-06-17 13:09:39 -05:00
Scot Breitenfeld
90757478c2 [svn-r25294] added implicit none 2014-06-16 12:06:46 -05:00
Scot Breitenfeld
7d3ff84d59 [svn-r25291] Fix for: 
HDFFV-8653
replace non-standard sizeof in the fortran tests with c_sizeof
 2014-06-16 11:56:01 -05:00
Scot Breitenfeld
9cf0844928 [svn-r25290] Fix for: 
HDFFV-8653
replace non-standard sizeof in the fortran tests with c_sizeof
 2014-06-16 11:38:07 -05:00
Scot Breitenfeld
744bc7d236 [svn-r25286] Fix for: 
HDFFV-8653
replace non-standard sizeof in the fortran tests with c_sizeof 

Tested: jam (gnu, intel) with make and cmake.
 2014-06-16 10:15:25 -05:00
HDF Tester
588a733b18 [svn-r25285] Snapshot version 1.9 release 184 2014-06-15 04:58:19 -05:00
Quincey Koziol
ec408ef083 [svn-r25283] Description: 
Correct error in new hyperslab selection test to use the right # of
dimensions for start/stride/count/block arrays.  Also, switch H5Sselect_select
to H5Smodify_select.

Tested on:
    MacOSX/64 10.9.3 (amazon) w/gcc 4.9.1, OpenMPI, C++, FORTRAN & threadsafe
    (Too minor to require h5committest)
 2014-06-13 22:23:54 -05:00
Quincey Koziol
4ccb865c70 [svn-r25273] Description: 
Bring in Chao/Neil/my changes to optimize hyperslab selection operations
further, along with 3 new public API routines: H5Scombine_hyperslab(),
H5Sselect_select() and H5Scombine_select(), along with many minor cleanups to
the code and fixing a few compiler warnings.

Tested on:
    Mac OSX/64 10.9.3 w/gcc 4.9.x and parallel w/OpenMPI
    (h5commttest forthcoming)
 2014-06-13 01:23:57 -05:00
HDF Tester
99800edafb [svn-r25241] Snapshot version 1.9 release 183 2014-06-08 06:30:43 -05:00
Scot Breitenfeld
cf71b7db57 [svn-r25238] Removed warning about the data type of the actual argument does not match the definition to verify function. Trivial fix. 
tested: jam (gnu)
 2014-06-04 09:08:17 -05:00
HDF Tester
4a8b02f838 [svn-r25216] Snapshot version 1.9 release 182 2014-05-25 06:51:16 -05:00
HDF Tester
2c12b5d42d [svn-r25199] Snapshot version 1.9 release 181 2014-05-18 04:53:32 -05:00