Commit Graph

12738 Commits

Author SHA1 Message Date
Scot Breitenfeld
3e8b387af2 [svn-r21689] Albert noted for *AIX 5.3:
*Hostname: nsipada0X:


"../../../hdf5/fortran/src/H5Ef.c", line 301.40: 1506-280 (E) 
Function argument
 assignment between types "int(*)(int,void*)" and "int(*)(int,struct 
 {...}*)" is
 not allowed.

Fixed by casting has H5E_auto2_t.

tested: jam (gfortran, intel)
2011-10-29 14:18:04 -05:00
Dana Robinson
b8a057585e [svn-r21688] Fixed a very minor typo.
No test needed.
2011-10-28 15:43:38 -05:00
Quincey Koziol
0381963da6 [svn-r21675] Description:
Don't check dataset storage size for compressed datasets with region
reference datatypes.  (The address of the region reference type in the file
varies and affects the compressed size)

Tested on:
    Mac OS X/32 10.7.2 (amazon) w/debug & production + check-vfd
2011-10-26 09:55:23 -05:00
Raymond Lu
c61a0a3d62 [svn-r21674] Issue 7618 - the library had seg fault when it tried to shrink the size of compound data type through H5Tset_size immedia
tely after the type was created.  I fixed it in this commit.

Tested on jam, linew, and koala.
2011-10-26 09:25:16 -05:00
Raymond Lu
9b7016e1d7 [svn-r21673] I updated it for Issue 7701.
No test needed.
2011-10-25 16:18:41 -05:00
Allen Byrne
c5e075851a [svn-r21667] Update FOLDER solution option for target properties. Added OPTION command for solution folder and no packaging.
Tested: local linux
2011-10-25 11:52:58 -05:00
Dana Robinson
fa4ab23b9e [svn-r21664] Added solution folders for most of the projects. This still needs some polish - the solution folder assignment should go closer to the target declaration and not all projects are grouped (parallel, c++, fortran, hl, and a few others).
Tested on Windows.
2011-10-25 01:59:10 -05:00
Jonathan Kim
e54d15a26c [svn-r21658] Purpose:
HDFFV-7770 - h5diff segmentation fault on JPSS files

Description:
    Fixed segfault over non-comparable attribute with different dimention or
    rank, along with '-c' option to display details.

Tested:
 jam (linux32-LE), koala (linux64-LE), heiwa (linuxppc64-BE), tejeda (mac32-LE), linew (solaris-BE), Windows, Cmake
2011-10-24 16:50:13 -05:00
Raymond Lu
1dcc75407e [svn-r21655] I updated H5_SIZEOF_OFF_T from 4 to 8.
Tested the change for 1.8 on VMS.
2011-10-24 14:13:50 -05:00
Scot Breitenfeld
aa4fe8486f [svn-r21654] Description:
Fixed the GM offset returned in the derived type h5_info_t and use the functon HDgmtime instead of gmtime.

tested: jam( intel, gnu)
2011-10-23 16:54:47 -05:00
Dana Robinson
0ffe28aef7 [svn-r21653] Removed unused done: label.
Trivial change - tested on 64-bit Windows 7 with Visual Studio 2010.
2011-10-22 02:19:47 -05:00
Dana Robinson
85d6e5de7e [svn-r21652] Removed unused variables from H5Pget_filter_by_id2().
Trivial change - tested on jam and local Windows 7 (VS2010).
2011-10-22 02:11:39 -05:00
Dana Robinson
f208df74c1 [svn-r21651] Removed unused done: label.
Trivial change - tested on 64-bit Windows 7 with Visual Studio 2010.
2011-10-22 01:56:58 -05:00
Dana Robinson
69bdd6b90a [svn-r21650] Changed unsigned int to size_t in several places for agreement with the input parameter. Quiets warnings from Visual Studio 2008.
Trivial change but tested on 32-bit linux (jam), 64-bit linux (koala), 64-bit Solaris/Sun CC (linew), 64-bit Windows 7 (kituo) just to be safe.
2011-10-21 18:05:15 -05:00
Dana Robinson
027735d912 [svn-r21647] Added a comment explaining the purpose of the change in the modification time format.
Trivial change - just made sure it compiled on Windows.
2011-10-21 15:59:16 -05:00
Dana Robinson
629cdef2a5 [svn-r21643] Reorganized the HDF5 C library source code in the CMake project.
Tested on Windows (minor change).
2011-10-21 12:36:41 -05:00
Allen Byrne
b694bbf7b2 [svn-r21641] remove spurious " from batch file 2011-10-21 11:42:10 -05:00
Allen Byrne
c76015b6dc [svn-r21635] sync legacy batch file to match unix test script 2011-10-21 10:43:26 -05:00
Neil Fortner
ed645b3857 [svn-r21630] Re-add note to RELEASE_DOCS.txt that was mistakenly removed in r21629. 2011-10-20 17:06:38 -05:00
Neil Fortner
72702153d2 [svn-r21629] Purpose: Update fix committed in r21556
Description:
An old patch was mistakenly committed in r21556.  Replaced this fix with the
latest.

Tested: jam, koala, heiwa (h5committest)
2011-10-20 17:01:21 -05:00
Scot Breitenfeld
cc6ce34d23 [svn-r21628] Description:
Removed line:

$(RM) $(DESTDIR)$(includedir)/H5f90i*.h

These *.h files are needed for HL_NPOESS and should not be removed when make clean is specified. 

The Daily Test installs the file using the deploy script, but then
runs make clean which removes the file, so the files are not there when we try to compile HL_NPOESS
causing an error.
2011-10-20 15:38:21 -05:00
Scot Breitenfeld
eefa5cf26f [svn-r21619] Description:
Changed the API to pass type(h5o_info_t) instead of a C pointer to the derived type.

Tested:

jam (gfortran and pgi)
2011-10-20 13:11:40 -05:00
Quincey Koziol
1c320f0025 [svn-r21617] Description:
Recalculate the size of destination attribute message when the source and
destination versions are different during an object copy operation. 
(Jira: HDFF-7718)

Tested on:
    Mac OS X/32 10.7.2 (amazon) w/debug
    (h5committest upcoming)
2011-10-20 12:05:23 -05:00
Scot Breitenfeld
7968c50607 [svn-r21615] Robodoc comment changes. 2011-10-19 22:02:52 -05:00
John Mainzer
a4a3bd4b03 [svn-r21613] Ported express test tunings and a minor edit back to
testpar/t_shapesame.c

tested with h5committest
2011-10-19 16:21:58 -05:00
Neil Fortner
8ce6f57fed [svn-r21610] Purpose: Fix bug 7776
Description:
When H5Ocopy failed due to attempting to expand an invalid reference in an
attribute (or at any point after the destination object header was inserted
into the cache), it failed to clean up correctly.  Modified
H5O_copy_header_real to keep track of whether the object header was inserted
and take appropriate action on failure.

Tested: fedora (too minor for full commit test)
2011-10-19 15:39:55 -05:00
Neil Fortner
395c1c7db5 [svn-r21603] Purpose: Add generic skip list implementation
Description:
Added new H5SL_TYPE_GENERIC skip list type, which uses void *'s as keys and a
client-supplied callback for key comparison.  This was added to support the
upcoming "merge named datatype" feature for H5Ocopy, but may be used in other
places as well.  Also added testing.

Also fixed a potential bug with the H5SL_TYPE_OBJ implementation, and added
testing for that.

Tested: jam, koala, heiwa (h5committest), durandal
2011-10-18 16:27:58 -05:00
Dana Robinson
aca9bf5cf3 [svn-r21601] Converted some C stdlib functions to use the HD prefix in H5Omtime.c
Tested on local linux (minor change)
2011-10-18 15:46:29 -05:00
Raymond Lu
4efd9af4fa [svn-r21597] Issue 7701 - fix for H5LTdtype_to_text. I made two corrections: 1. I changed all snprintf to HDsnprintf; 2. I corrected all wrong length passed to snprintf which cause Mac machines to fail.
Tested on jam.  But I tested the same change for 1.8 branch on jam, koala, linew, Windows, and Apple.
2011-10-18 11:47:34 -05:00
Allen Byrne
dc90cfc1c2 [svn-r21596] Correct large file support test 2011-10-18 11:44:32 -05:00
Allen Byrne
cd38a32601 [svn-r21593] Add CMake option to disable packaging component: needed to avoid configuration warning when using Visual Studio Express versions on windows.
Tested: Bangan
2011-10-17 14:49:06 -05:00
HDF Tester
62aa159e09 [svn-r21587] Snapshot version 1.9 release 95 2011-10-16 09:00:02 -05:00
Jonathan Kim
664c013fc7 [svn-r21586] Description:
Added a funtion to reset dataset & hyperslab buffer size for h5repack from an 
    environment variable.
    This is performance debugging purpose for now.

Tested:
 jam (linux32-LE), koala (linux64-LE), heiwa (linuxppc64-BE), tejeda (mac32-LE), Windows (32-LE), cmake
2011-10-14 17:44:11 -05:00
Scot Breitenfeld
3be11d46c5 [svn-r21584] Removed H5L_info_t definition from test source, it's defined in the hdf5 library.
tested: jam (intel)
2011-10-14 16:13:57 -05:00
Scot Breitenfeld
a757ea73f5 [svn-r21583] Fixed robodoc headers in comments. 2011-10-14 16:05:39 -05:00
Elena Pourmal
03f6ea8e54 [svn-r21577] Maintenance: Added F2003 info 2011-10-14 15:09:53 -05:00
Raymond Lu
fb6a34f208 [svn-r21571] Revision of the fix for Issue 7701 (H5LTdtype_to_text): I revised the code per Quincey's comments. (I changed the 1.8 branch first. I'm aware of that.)
Tested on jam.  But I tested the same change in 1.8 branch with h5committest.
2011-10-14 14:31:53 -05:00
Scot Breitenfeld
3a4d03625f [svn-r21570] Description: Cleaned up comments and variable names to match RM, no source changes. 2011-10-14 14:21:51 -05:00
Neil Fortner
69b6e518ef [svn-r21564] Improve testing for H5Pset_libver_bounds (bring in line with 1.8 branch)
Tested: durandal (too minor for full h5committest)
2011-10-14 10:34:45 -05:00
Neil Fortner
1c0f834918 [svn-r21562] Improve testing for H5Pset_libver_bounds
Tested: durandal (too minor for full h5committest)
2011-10-14 09:36:03 -05:00
Quincey Koziol
9fa5dca9c2 [svn-r21561] Description:
Correct error in loading local heap prefix & data block from the file.
Sometimes the local heap's prefix could be loaded before the data block (e.g.
using H5Oget_info), but then when the data block was loaded later, the free
list information would get lost, causing the heap's size to grow larger than
necessary.  This is Jira bug #HDFFV-7767

Tested on:
    Mac OS X/32 10.7.2 (amazon) w/debug
    (h5committest coming up)
2011-10-14 08:28:23 -05:00
Neil Fortner
56960ac85c [svn-r21556] Purpose: Fix bug in H5Ocopy
Description:
H5Ocopy could get confused when copying a named datatype containing an
attribute which used that named datatype as its datatype.  This happened
because H5Ocopy would recurse into the attribute's datatype before the object
the attribute was in was fully copied (i.e. before the "post-copy" pass).
Modified H5Ocopy to avoid recursing before the post-copy step in this case.
Required many changes, including to how non-committed shared messages are
copied.

Tested: jam, koala, heiwa (h5committest); durandal
2011-10-13 18:10:50 -05:00
Elena Pourmal
1406da6362 [svn-r21553] Maintenance: Added an entry for the Fortran DS wrappers. 2011-10-13 16:29:44 -05:00
Elena Pourmal
711f8f7934 [svn-r21552] Maintenance: Addressed HDFFV-915 - investigate if H5open and H5close are needed in the corresponding
Fortran wrappers.

Solutions:   The calls were not needed and were removed from the C stubs h5open_c and h5close_c for the correspnding
             Fortran subroutines h5open_f and h5close_f.

Platforms tested: jam with gcc and gfortran, PGI and Intel
                  koala with PGI and Intel
                  linew with the standard Sun compilers
2011-10-13 15:25:32 -05:00
Dana Robinson
ffb0f23af2 [svn-r21549] Removed unused references to USE_STDIO and MAX_BUF in Windows configuration CMake file. 2011-10-13 12:07:41 -05:00
Dana Robinson
70eb4f0e2e [svn-r21546] Reverts 21497 (deep string copy of log file name). This string is copied correctly deep in the H5P code. Tested on local linux (trivial change). 2011-10-13 11:13:47 -05:00
Dana Robinson
b2e5e9978d [svn-r21538] Removed obsolete Windows STDIO VFD configuration options from CMake config files.
Tested on Windows
2011-10-13 07:45:56 -05:00
Scot Breitenfeld
6b4e6d992d [svn-r21537] Description:
Modified h5oget_info_by_name_f to return a derive type h5o_info_t

Tested: jam( gfortran, pgi, intel)
2011-10-13 00:18:19 -05:00
Scot Breitenfeld
0e0fa10599 [svn-r21536] Desciption: Removed H5Eget_auto_f from source, moved to F2003_new branch for
further testing.

Tested: jam (gnu)
2011-10-12 23:49:36 -05:00
Scot Breitenfeld
c09f1dbc24 [svn-r21535] Description:
Updated to the robodoc headers comments, cleaned up the spacing of the 
source code which is included in the documenaton.

Tested: jam (intel)
2011-10-12 23:10:34 -05:00