Commit Graph

325 Commits

Author SHA1 Message Date
Scot Breitenfeld
f859cb732b
Fixed Spelling Errors (#1166)
* fixed missed closing of a dataset

* fixed missed closing of a dataset

* fixed typo in error return

* Committing clang-format changes

* minor edits

* code format

* Committing clang-format changes

* code format

* minor edit

* switched from using MPI_count, to actual bytes written for H5FD_mpio_debug rw debugging

* Committing clang-format changes

* changed size_i in printf to reflect the I/O.

* Committing clang-format changes

* Fixed seg fault with xlf on BE with -qintsize=8

* fixed error function string

* spelling corrections via codespell, added new spell check github actions

* Committing clang-format changes

* misc

* misc

* misc

* misc

* misc

* misc

* misc

* misc

* misc

* misc

* misc

* misc

* misc

* misc

* Committing clang-format changes

* misc

* misc

* misc

* misc

* misc

* misc

* Committing clang-format changes

* misc

* work around for https://github.com/codespell-project/codespell/issues/2137

* misc

* added missing file

* misc

* misc.

* misc

* switch to using Codespell with GitHub Actions

* misc.

* misc.

* fixed more sp errors

* Fix new typos found by codespell.

* fixed proceed with precede

* fixed variable in fortran test

* fixed minnum

* updated spelling list

Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
Co-authored-by: Larry Knox <lrknox@hdfgroup.org>
2021-12-07 08:27:29 -06:00
Larry Knox
2ea165efd0
Update license url part2 (#333)
* Modify temporary rpath for testing in java example scripts.

* Update URL in source file Copyright headers for web copy of COPYING
    file - files not in src or test.
2021-02-17 08:52:36 -06:00
Allen Byrne
ff0881f35b OESS-98 merge with clang-format changes 2020-09-25 16:43:57 -05:00
David Young
4cebd8aa6c Make examples installation respect DESTDIR. Fixes
HDFFV-11060.
2020-05-26 10:43:20 -05:00
Quincey Koziol
9e5dbf6906 Trim trailing whitespace 2020-04-20 18:12:00 -05:00
Allen Byrne
2c2627e7f6 Flag construction must be after compiler detection 2020-04-05 13:38:04 -05:00
Allen Byrne
666205a55f TRILAB-142 Change minimum CMake version to 3.12 2020-02-21 16:16:06 -06:00
Allen Byrne
7022a3380c HDFFV-11001 need to qualify all by parallel or serial types 2020-01-15 12:28:53 -06:00
Allen Byrne
a0ae5e9b89 HDFFV-11001 Add fine control over testing 2020-01-15 11:38:06 -06:00
David Young
f1b39ad80e Apparently, + has no special meaning, and neither does \+, in so-called
"obsolete" / POSIX "basic" regular expressions.  Also, not every version of
`sed` out there supports the `-E` option.  So delete the -E flag and use
the regex `[^/][^/]*` instead of `[^/]+`.

Add config/netbsd to the MANIFEST.
2019-11-12 10:43:26 -06:00
David Young
0b721858e4 Make these scripts relocatable again: derive a relative path for the
original installation prefix from the examples prefix.  Use that
relative path to locate the current installation prefix, always.  Fall
back to an absolute installation prefix if the relative path cannot be
derived.
2019-11-05 15:13:47 -06:00
David Young
b8a93a7224 Let us override the examples directory using --with-examplesdir=DIR.
This is handy for NetBSD where HDF5 examples are installed
by convention in $prefix/share/examples/hdf5/ rather than in
${prefix}/share/hdf5_examples/, which is the HDF5 default.

Place hdf5_examples/ under ${datarootdir} which on most systems will be
${prefix}/share/, anyway.
2019-10-03 16:01:40 -05:00
David Young
7bb8d071c6 Under the examples directories, always find the installed HDF5
executables and scripts using @prefix@ instead of a relative
path, because the number of ../ in the relative path will be
different on NetBSD than on other systems.

Examples on NetBSD are installed at ${prefix}/share/examples/hdf5/
instead of at ${prefix}/share/hdf5_examples/, by convention.  It may be
the same on other BSDs, I'm not sure.
2019-10-03 16:01:40 -05:00
Dana Robinson
bb8904a75e Merge pull request #1826 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:develop_minor_pr to develop
* commit '4227b8948d7091205b4f8dc1271d7dcae01bb0fb':
  Reverts the removal of config/conclude_fc.am while keeping the changes to config/gnu-fflags.
  Fixed a couple of typos.
2019-08-01 09:40:01 -05:00
Dana Robinson
4227b8948d Reverts the removal of config/conclude_fc.am while keeping
the changes to config/gnu-fflags.
2019-07-31 22:51:53 -05:00
Allen Byrne
4df595c22d Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)
* commit 'd169391529f253a9903b8e6cacf38c59ceefab07':
  Parallel Fortran tests now use the MPI module instead of including mpif.h.
  First stab at gfortran versions. Tested on gfortran 7-9 so far.
  Moved the -std=f2008 option to gfortran 9 for now.
  Updated gfortran options. * Removed conclude_fc.am, which was causing verbose builds. Need to   investigate more, though. * Added gfortran 9 warnings and flags. This will need to be separated   into other version blocks based on when the options first appeared. * The standard is now explicitly set at 2008.
2019-07-29 16:24:15 -05:00
Dana Robinson
d169391529 Merge pull request #1808 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:gnu-flags-work to develop
* commit '7d291d059da6287f769951c4854c566da0b93ce8':
  Parallel Fortran tests now use the MPI module instead of including mpif.h.
  First stab at gfortran versions. Tested on gfortran 7-9 so far.
  Moved the -std=f2008 option to gfortran 9 for now.
  Updated gfortran options. * Removed conclude_fc.am, which was causing verbose builds. Need to   investigate more, though. * Added gfortran 9 warnings and flags. This will need to be separated   into other version blocks based on when the options first appeared. * The standard is now explicitly set at 2008.
2019-07-29 16:13:24 -05:00
Allen Byrne
6a932198aa HDFFV-10529 Update CMake tests to use test fixtures 2019-07-23 16:24:56 -05:00
Allen Byrne
f724e86727 HDFFV-10845 use of TARGETFILE disables auto emulator 2019-07-17 11:58:04 -05:00
Dana Robinson
8bd2c81cd5 Updated gfortran options.
* Removed conclude_fc.am, which was causing verbose builds. Need to
  investigate more, though.
* Added gfortran 9 warnings and flags. This will need to be separated
  into other version blocks based on when the options first appeared.
* The standard is now explicitly set at 2008.
2019-07-17 01:23:44 -07:00
Allen Byrne
e7f16c6f2c HDFFV-10805 Add option to only build shared targets
HDFFV-10805 Add ONLY_SHARED_LIBS option and prefer shared over static
HDFFV-10803 Update FindSZIP.cmake find module
Remove unneeded modules and update java modules
2019-06-18 07:46:25 -05:00
Allen Byrne
122b63a5a2 HDFFV-10703 Update CMake commands to latest standard 2019-02-15 15:48:24 -06:00
Allen Byrne
6f71b2cdcf Refactor mpi test names 2019-02-11 12:42:46 -06:00
Allen Byrne
d98faf5703 Rename parallel tests to start with PAR_ 2019-02-11 11:09:43 -06:00
Allen Byrne
e73197077b Remove F2003 Option and references 2019-02-06 10:10:46 -06:00
Larry Knox
d20fd310e4 Change prefix in example scripts to relative path to bin. This was done
for 1.8, and works wherever installed without the need to replace the
original prefix.
2018-08-23 07:37:00 -05:00
Allen Byrne
df64de9eed Add fortran MPI to test and example 2018-06-06 13:44:56 -05:00
Allen Byrne
2be5b1abd4 Fix typo 2018-05-24 09:22:19 -05:00
Allen Byrne
7c4598cf74 Remove link flag from compile command 2018-05-22 15:48:34 -05:00
Allen Byrne
424e2275bc Correct command usage 2018-05-07 16:08:42 -05:00
Allen Byrne
6fcf4c9aeb Remove APPEND 2018-05-03 15:41:50 -05:00
Allen Byrne
ab971fafdd Fix another command revert 2018-05-03 12:10:13 -05:00
Allen Byrne
866337babe Missed a command revert 2018-05-03 12:03:46 -05:00
Allen Byrne
1d1333ed6b Revert to old style for LINK_FLAGS gen expr not working 2018-05-03 11:57:30 -05:00
Allen Byrne
01a77cbfb1 LINK_FLAGS must be separate property sets 2018-05-03 10:44:57 -05:00
Allen Byrne
1ab0814a43 Fix link flags syntax 2018-05-03 09:28:54 -05:00
Allen Byrne
b73c0d2ab8 Revert refactor link flags 2018-05-02 16:33:35 -05:00
Allen Byrne
d906f2dcc5 refactor link flags to interface 2018-05-02 15:42:38 -05:00
Allen Byrne
c6827191f9 TRILABS-19 fix syntax for windows 2018-05-02 12:19:30 -05:00
Allen Byrne
6dd91d206f TRILABS-19 Link flags need - character 2018-05-02 10:04:14 -05:00
Allen Byrne
6fb94eb3a3 TRILABS-19 fix fortran link flags 2018-04-30 09:56:27 -05:00
Allen Byrne
76d0cc0ca9 TRILABS-19 Refactor fortran properties 2018-04-30 09:03:29 -05:00
Allen Byrne
120195e5aa TRILABS-19 fix typos 2018-04-27 12:44:42 -05:00
Allen Byrne
2347bffaa2 TRILABS-19 remove add_defintions and use generator expressions 2018-04-26 16:41:04 -05:00
Allen Byrne
6c82c49dd5 TRILABS-20 set a compiler name on all project commands 2018-04-20 10:11:55 -05:00
Allen Byrne
03e579f201 TRILABS-19 All c code INCLUDE_DIRECTORIES converted 2018-04-17 22:29:57 -05:00
Allen Byrne
46f2a2a432 TRILABS-19 Initial conversion of include_directories to targets 2018-04-17 15:57:58 -05:00
Allen Byrne
24c62ba7fe Change CMake min to 3.10 2018-03-09 12:32:06 -06:00
Allen Byrne
b36bad53d9 Inc CMake min, Add new tests, rework test CMake files 2018-02-27 12:57:07 -06:00
Allen Byrne
6ca95c512a HDFFV-10385 rework java names 2018-01-17 10:27:00 -06:00