Commit Graph

3447 Commits

Author SHA1 Message Date
David Young
f68226ed89 Use the portable -eq operator instead of the bash-ism ==. Fixes the
tests on NetBSD, where /bin/sh != bash.
2020-07-07 10:49:55 -05:00
David Young
d553bd4bf3 Restore a literal percent sign ("%%") that I accidentally deleted. 2020-07-07 10:49:55 -05:00
David Young
4e41ca05aa Delete extra argument, there is no formatting for it. 2020-07-07 10:49:55 -05:00
David Young
307cb5da48 Squash my changes on branch fprintf-experiment into one commit for
reapplication to my new warnings branch, `warnings-again`.  These
changes are included:

commit 915551b7bf64e777dd2007386ec77b1d117770da
Merge: 63858c2 a8892bb
Author: David Young <dyoung@hdfgroup.org>
Date:   Mon Nov 25 17:39:49 2019 -0600

    Merge remote-tracking branch 'hdf5/develop' into fprintf-experiment

commit a8892bb42d
Merge: 5c911d8 f907b51
Author: David Young <dyoung@hdfgroup.org>
Date:   Mon Nov 25 17:33:54 2019 -0600

    Merge pull request #2055 in HDFFV/hdf5 from ~DYOUNG/vchoi_fork:add-werror-and-squash-some to develop

    * commit 'f907b511d06612dafc7814a7c30f2f3d2b76d52b':
      Oops, remove more C99 designated initializers for VS 2010 compatibility.

commit 63858c22e168acaec0af8ced6641f26102cc6bb0
Merge: 20ae787 5c911d8
Author: David Young <dyoung@hdfgroup.org>
Date:   Mon Nov 25 17:04:42 2019 -0600

    Merge remote-tracking branch 'hdf5/develop' into fprintf-experiment

commit 5c911d8baf
Merge: b8a5671 62208b0
Author: David Young <dyoung@hdfgroup.org>
Date:   Mon Nov 25 16:58:27 2019 -0600

    Merge pull request #2030 in HDFFV/hdf5 from ~DYOUNG/vchoi_fork:add-werror-and-squash-some to develop

    * commit '62208b056a09c01855fbac7f75146be58ad6bfe5': (44 commits)
      Add an #include to get a function declaration.
      Don't use C99 designated initializers, they're not compatible with Visual Studio 2010.
      Quiet some more maybe-uninitialized warnings---each is a false positive, *sigh*.  This is more code that may not compile with VS2010, *sigh sigh*.
      Always warn on maybe-uninitialized.  -Wincompatible-pointer-types was not available until GCC 5, so enable it only if that's the GCC version we're using.
      Only promote maybe-uninitialized warnings to errors on GCC 8.  Even on GCC 8, there may be false positives at low optimization levels?  I need to check.
      Only use -Werror=cast-function-type with GCC 8 and later.
      Put all of the -W options back into the order I found them in so that it's easier to compare old and new config/gnu-flags.
      Add new source files to CMakeLists.txt.
      Mention the -Werror= flags in libhdf5.settings.in.
      free -> HDfree
      Promote decleration-after-statement warnings to errors.
      Quiet decleration-after-statement warnings.
      Move a statement under some declarations since some vintages of Visual Studio don't like declarations after statements.
      Document H5D__chunk_mem_xfree_wrapper().
      Undo accidental test deletion.
      Oops, delete a debug printf that snuck in here.
      Undo my changes to the HD macros, hadn't really intended those to be on this branch....
      Make errors of some more warnings.  Move disabled warnings to DEVELOPER_WARNING_CFLAGS.  Put just one warning option on a line, and sort some of the options.
      Cast to the parameter type, H5VL_token_t *, instead of to unsigned char *.
      Change hdset_reg_ref_t and H5R_ref_t from arrays of unsigned char to structs containing those arrays.  Encapsulating the arrays in this way makes it easier to write and think about pointers to these types, casts to/from these types, etc.
      ...

commit 20ae7877e33931b95e8c3502b027d6c3fe94a11f
Merge: 46f8c61 edd5297
Author: David Young <dyoung@hdfgroup.org>
Date:   Fri Nov 22 15:34:09 2019 -0600

    Merge remote-tracking branch 'origin/add-werror-and-squash-some' into fprintf-experiment

commit 46f8c613d5117a8be5bc8385a072daa0b4262f06
Author: David Young <dyoung@hdfgroup.org>
Date:   Fri Nov 22 15:29:00 2019 -0600

    GCC really wants us to use `ll` to format `long long`, so try to make that work
    before any other format modifier.  Seems like we're not compiling the autoconf
    test program with -Werror=format ?  Probably should.

commit eee35b8ef3759c391327cd48a9b3c56b6f8abc99
Author: David Young <dyoung@hdfgroup.org>
Date:   Fri Nov 22 15:28:05 2019 -0600

    It's hard to know just how wide an HDoff_t will be, and I don't think POSIX or
    C standards provide a PRI macro for it, so cast to intmax_t and format using
    PRIdMAX.

commit 86eab12df7a89b546a38e99f8178dd2adbcb3433
Author: David Young <dyoung@hdfgroup.org>
Date:   Fri Nov 22 15:26:25 2019 -0600

    URemove some casts.se the right format string for the argument.  Here and there
    stop casting a printf argument.

commit f722f7cbecbaa99449941484b014426f62f1bed5
Merge: 58e3743 6d5ec83
Author: David Young <dyoung@hdfgroup.org>
Date:   Fri Nov 22 14:44:16 2019 -0600

    Merge branch 'add-werror-and-squash-some' into fprintf-experiment

commit 58e3743b7faa9836606ee91798fe80dfc0040da7
Author: David Young <dyoung@hdfgroup.org>
Date:   Wed Nov 20 21:07:21 2019 -0600

    Remove custom HDfprintf implementation, using the standard library's,
    instead.  Take a swipe at repairing fprintf format strings, mainly
    replacing "%Hu" with "%" PRIuHSIZE, "%a" with "%" PRIuHADDR, "%Zu" with
    "%zu".

    Here and there remove an awkward cast of a printf argument to `long
    long` and use PRI[doux]8, PRI[doux]32, or PRI[doux]64, instead.

    Change occurrences of "%t" to "%s" and perform a suitable change of
    argument, `cond` -> `cond ? "TRUE" : "FALSE"`.

    Some occurrences of %Hu, %a, and %t remain, they just weren't flagged by
    the compiler because of #ifdef'age.

commit d4366909293fa970c23512ac80e5d865d76cddbf
Author: David Young <dyoung@hdfgroup.org>
Date:   Wed Nov 20 20:54:32 2019 -0600

    Promote format-string warnigns to errors.
2020-07-07 10:49:55 -05:00
Quincey Koziol
13c9b3768e Address CMake and deprecated API build failures from monotonic timer patch. 2020-07-03 11:28:12 -05:00
Quincey Koziol
71b601d0d3 Clean up warnings 2020-06-27 20:02:51 -05:00
Quincey Koziol
7bdab523b3 Refactor code to remove remaining checks for H5_HAVE_GETTIMEOFDAY scattered around in various places. Also clean up iopipe.c. 2020-06-27 09:47:55 -05:00
vchoi
01b632c69c Fix for HDFFV-10961:
Couple changes to the tests' usage output files for h5clear.
2020-06-11 14:12:38 -05:00
vchoi
c597bd50d2 Fix for HDFFV-10961: add description to usage for --increment option. 2020-06-11 13:17:35 -05:00
Dana Robinson
ad8f72ca29 Removed HDgets macros since gets was deprecated in C99 and removed
in C11 (gets() is not used in our repo).
2020-05-10 03:33:54 -07:00
Dana Robinson
dc3b8372c7 Protected H5Oset_comment() in h5dump test generator.
(Assumes environment variable overrides default VOL connector)
2020-04-28 04:21:47 -07:00
Jordan Henderson
0644921cc2 Merge branch 'develop' of ssh://bitbucket.hdfgroup.org:7999/~jhenderson/hdf5 into develop 2020-04-27 18:57:47 -05:00
Jordan Henderson
2442de3389 Fix memory error in h5dump xml 'escape the string' routine 2020-04-27 18:57:36 -05:00
Quincey Koziol
4186e0d5be Merge pull request #2540 in HDFFV/hdf5 from extend_h5debug to develop
* commit '3f3363177d5cc1efc8fcfc70e1feed7a293da2d4':
  Range check # of 'extra' command-line parameters against array size.
  Refactor "extra" command-line arguments, and clean up code so the tool doesn't assert when exiting.
  Extend h5debug to support 3-D datasets for chunks.
2020-04-27 18:48:32 -05:00
Dana Robinson
bf5e832acc Fixed pio_perf const pointers. 2020-04-27 09:58:11 -07:00
Dana Robinson
c03ee563f4 Further updates to the tools warnings fixes from code review. 2020-04-27 08:50:27 -07:00
Dana Robinson
de3bfa697a Updates to tools warning PR from code review. 2020-04-26 02:54:29 -07:00
Quincey Koziol
3f3363177d Range check # of 'extra' command-line parameters against array size. 2020-04-25 22:52:52 -05:00
Quincey Koziol
c18ed719ec Refactor "extra" command-line arguments, and clean up code so the tool doesn't
assert when exiting.
2020-04-25 20:48:32 -05:00
Dana Robinson
a8676d74d9 Fixes for warnings in the tools code. 2020-04-25 16:49:04 -07:00
Quincey Koziol
ed833f1c8d Extend h5debug to support 3-D datasets for chunks. 2020-04-24 21:13:31 -05:00
Dana Robinson
1db039d1be Merge pull request #2532 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:develop_minor to develop
* commit '785bd0975ba13c3033820d0fc809da963fcd54ca':
  Fixed h5diff command-line parameters to use 1 and 2 instead of src and dst.
  Added VOL command-line options to (p)h5diff, h5ls, h5dump, and h5mkgrp.
2020-04-22 19:07:48 -05:00
Dana Robinson
785bd0975b Fixed h5diff command-line parameters to use 1 and 2 instead of src
and dst.
2020-04-22 16:49:52 -07:00
Dana Robinson
8cd9d8349e Added VOL command-line options to (p)h5diff, h5ls, h5dump, and h5mkgrp. 2020-04-21 11:36:10 -07:00
Dana Robinson
729ad25bdf Merge pull request #2530 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:develop_minor to develop
* commit 'c6097935d5be4c3750b9bf9167783ad28158905b':
  Separated VFD and VOL parameters in tools.
2020-04-21 08:49:15 -05:00
Dana Robinson
c6097935d5 Separated VFD and VOL parameters in tools. 2020-04-20 17:38:45 -07:00
Quincey Koziol
9e5dbf6906 Trim trailing whitespace 2020-04-20 18:12:00 -05:00
Dana Robinson
9ecca22dd1 Fixed problems with S3 and HDFS VFDs.
* Updated info struct parameter to correct info_string
* Fixed Makefile.am where the S3 VFD was listed twice, causing
  duplicated symbols errors.
2020-04-16 17:07:21 -07:00
Dana Robinson
2188e7d731 Update h5repack long arguments for id-->value changes. 2020-04-14 05:16:01 -07:00
Dana Robinson
28d2596f65 Changed identifiers and command-line options from "id" to "value" in tools
code to be in agreement with H5VL API terminology.
2020-04-14 04:31:01 -07:00
Dana Robinson
d86089f583 Added support for passing connector info strings via the command
line to the tools internals.
2020-04-09 08:40:41 -07:00
Dana Robinson
35c0d5cdfc Fix for passthrough VOL not passing tools tests due to incorrect
optional callback queries.
2020-04-08 16:44:19 -07:00
Allen Byrne
61b8018004 Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)
* commit 'f6514c35ea3786206a8db73e1cad8fce8fe6a715':
  Updated test ddl files so CMake passes after h5dump failures.
  Modifications based on PR review feedback.
  Add two routines gen_ref_files() and gen_sel_files() to generate test files related to references and selections. These test files will be copied to 1.12, 1.10 and 1.8 for compatibility testing.
2020-04-07 07:08:16 -05:00
Dana Robinson
8e948aa7b7 Updated test ddl files so CMake passes after h5dump failures. 2020-04-06 15:19:55 -07:00
Allen Byrne
fd18d013f1 Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)
* commit '4830a1796441abbb5a4fbd2cff9a651f2a0d066e':
  Updated tools dump output when dataset offset is undefined.
  Added checks for native optional call support in some of the tools.
  Misc changes for h5dump VOL changes.
2020-04-06 14:13:27 -05:00
Dana Robinson
110cafb9c7 Merge branch 'develop' into tools_vol_update 2020-04-06 09:38:00 -07:00
Allen Byrne
70495751c0 Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)
* commit '5d1590079ea0061a7b86d7210cb796b6d58a17c7':
  Skip testing of passthrough VOL connector in a Family File tools test
  Restore previous tools library driver name behavior with passthrough VOL connector
2020-04-05 11:06:35 -05:00
Allen Byrne
57f5d00a43 TRILAB-192 add c++ and fortran warnings build systems one file 2020-04-05 10:50:08 -05:00
Jordan Henderson
5d1590079e Merge pull request #2490 in HDFFV/hdf5 from tools_vol_update to develop
* commit 'a5a2fb44296327787476407a249d9470b3c80427':
  Skip testing of passthrough VOL connector in a Family File tools test
  Restore previous tools library driver name behavior with passthrough VOL connector
2020-04-03 15:06:08 -05:00
Jordan Henderson
a5a2fb4429 Skip testing of passthrough VOL connector in a Family File tools test 2020-04-03 14:29:10 -05:00
Jordan Henderson
08e77ac6fa Restore previous tools library driver name behavior with passthrough VOL connector 2020-04-03 12:45:22 -05:00
Allen Byrne
b7227657f2 Add missing header include 2020-04-03 08:50:51 -05:00
Dana Robinson
85b3b9e670 Updated tools dump output when dataset offset is undefined. 2020-04-02 10:25:46 -07:00
Dana Robinson
1c85473766 Fixed unnecessary H5R casts in the tools that were raising warnings. 2020-04-02 03:57:05 -07:00
Dana Robinson
456308ff17 Added checks for native optional call support in some of the tools. 2020-04-02 02:12:19 -07:00
Dana Robinson
3cd1b46b9c Merge branch 'develop' into tools_vol_update 2020-04-01 23:27:08 -07:00
Dana Robinson
b1533616f2 Minor renaming in the tools code. 2020-03-31 16:58:24 -07:00
Dana Robinson
816a12f04f Merge branch 'develop' into tools_vol_update 2020-03-31 03:43:03 -07:00
Gerd Heber
a46f31c2eb Merge pull request #2479 in HDFFV/hdf5 from ~GHEBER/hdf5:bugfix/HDFFV-11065 to develop
* commit '2dfc047bc4aca7c13bccf44da97bff026cbbf5a6':
  Fix for HDFFV-11065.
2020-03-30 11:26:14 -05:00
Dana Robinson
c36b707578 Merge branch 'tools_vol_update' of https://bitbucket.hdfgroup.org/scm/~derobins/hdf5_der into tools_vol_update 2020-03-30 01:52:21 -07:00